2020-09-12T05:02:51,075 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-12T05:02:51,756 Created temporary directory: /tmp/pip-ephem-wheel-cache-s7z346tt
2020-09-12T05:02:51,764 Created temporary directory: /tmp/pip-req-tracker-dqy992ht
2020-09-12T05:02:51,766 Initialized build tracking at /tmp/pip-req-tracker-dqy992ht
2020-09-12T05:02:51,767 Created build tracker: /tmp/pip-req-tracker-dqy992ht
2020-09-12T05:02:51,768 Entered build tracker: /tmp/pip-req-tracker-dqy992ht
2020-09-12T05:02:51,770 Created temporary directory: /tmp/pip-wheel-gmosjgiq
2020-09-12T05:02:51,790 1 location(s) to search for versions of gffutils:
2020-09-12T05:02:51,790 * https://pypi.org/simple/gffutils/
2020-09-12T05:02:51,790 Fetching project page and analyzing links: https://pypi.org/simple/gffutils/
2020-09-12T05:02:51,792 Getting page https://pypi.org/simple/gffutils/
2020-09-12T05:02:51,797 Found index url https://pypi.org/simple
2020-09-12T05:02:52,042   Found link https://files.pythonhosted.org/packages/d9/a5/3d6f46b049c1091efcc6f6d29e9d39470f5f8d62e17cdb6fd331526fd71b/gffutils-0.0.0.tar.gz#sha256=e02b331fdfcbc6095b53126281c7591fc82bdd44ebedee4b6bff4910e8e29883 (from https://pypi.org/simple/gffutils/), version: 0.0.0
2020-09-12T05:02:52,043   Found link https://files.pythonhosted.org/packages/86/64/6dab23af4bfb4052c66a8f1f174c95d59f8e797220bfe19dfd11122538d9/gffutils-0.7.tar.gz#sha256=1e03365ed45a1dafb8ff750a562930872dc09cdd86603e3f34c81a4183571546 (from https://pypi.org/simple/gffutils/), version: 0.7
2020-09-12T05:02:52,044   Found link https://files.pythonhosted.org/packages/f9/6a/b2cf512d0772c220431fbab8465abdb2d730bd6ac22a6816e023afa675b8/gffutils-0.8.tar.gz#sha256=5eda5e365352b3c7f84fe6cff4b4f69a2c8d7ba6ea5403d53e1bb7718cd3c13f (from https://pypi.org/simple/gffutils/), version: 0.8
2020-09-12T05:02:52,045   Found link https://files.pythonhosted.org/packages/07/52/5d10ce38562ed0b8468697e09f8898b45df543d5e9fe5b6c5a4a5aca6685/gffutils-0.8.1.tar.gz#sha256=1994525e35cbf32d1a5679e9bf708b84778fb760d7889c917dd7cb571bb06ff4 (from https://pypi.org/simple/gffutils/), version: 0.8.1
2020-09-12T05:02:52,046   Found link https://files.pythonhosted.org/packages/eb/89/e2e0c90b9be07b3ab650b7474971fbf0b1e5d4d29a2b03c676ffad9501bb/gffutils-0.8.2.tar.gz#sha256=fc85976687bb8ff6742daebd7e3d3fcbf47bfda4ab8ef7e02c8b155b733ba8ac (from https://pypi.org/simple/gffutils/), version: 0.8.2
2020-09-12T05:02:52,047   Found link https://files.pythonhosted.org/packages/3e/2b/1a5d72b043c024b86d573ceab15b464acd0638b912cd30ddce71e7d93112/gffutils-0.8.3.tar.gz#sha256=9f28733ed6f9603817691c0ac14078792f7f853054ee90bc401320a495d218f2 (from https://pypi.org/simple/gffutils/), version: 0.8.3
2020-09-12T05:02:52,048   Found link https://files.pythonhosted.org/packages/8d/00/6f4f59d109bbc421ad59faf64eb31cb90858a4a316c31eb49e09467f4a93/gffutils-0.8.3.1.tar.gz#sha256=6939ff831bb2e6a33a2c99d4c57ce64b1c517ca56be3014b4171d45a86964508 (from https://pypi.org/simple/gffutils/), version: 0.8.3.1
2020-09-12T05:02:52,049   Found link https://files.pythonhosted.org/packages/d8/a3/487db49cf8b35dd17d6360f464d3524b369365e5bd7964ac32b33a6fabab/gffutils-0.8.4rc1.tar.gz#sha256=63d3ec216bb395ff8d9f9033f8aa83f82130e4ef229273e37beb1034580da666 (from https://pypi.org/simple/gffutils/), version: 0.8.4rc1
2020-09-12T05:02:52,050   Found link https://files.pythonhosted.org/packages/25/9d/97c58a9a602e41e2797747fd94b6bd4aa82331178a074c4da966030045ba/gffutils-0.8.5.tar.gz#sha256=c5acd59c55662fe082fa78bc5d5ae383e73040f7610ef8d45b8bd62d9fae74d8 (from https://pypi.org/simple/gffutils/), version: 0.8.5
2020-09-12T05:02:52,051   Found link https://files.pythonhosted.org/packages/21/b1/0ecce3b0304048241da7e830196aa50d62dfe9c9bdbf4fb48aebbf1d363e/gffutils-0.8.6.tar.gz#sha256=6cdfb77b57ef22b5971e5d876bcc89e05a5e6194589d1e283b5e9d6df83fff46 (from https://pypi.org/simple/gffutils/), version: 0.8.6
2020-09-12T05:02:52,051   Found link https://files.pythonhosted.org/packages/40/bc/85541d291c6da6570deed2988206bb322afb8d5ede1e72fd267c440a286d/gffutils-0.8.6.1.tar.gz#sha256=e421a06ef916041946f6b1dc3ae85776524c6bc3578bdbdda5f7e98d8a3d8db4 (from https://pypi.org/simple/gffutils/), version: 0.8.6.1
2020-09-12T05:02:52,052   Found link https://files.pythonhosted.org/packages/d8/bf/b630f9a006d7380d79b344b41af548c73371844737f221a9d4a59d57f91e/gffutils-0.8.7.tar.gz#sha256=4fb2c95dbf7f98e537d00995eb7aa6bf36ee70fd9a707aa3df2202c898d54c01 (from https://pypi.org/simple/gffutils/), version: 0.8.7
2020-09-12T05:02:52,053   Found link https://files.pythonhosted.org/packages/a7/fa/3d8cd13f58540098f5efb3ec7dd33d1bb6a27ee06e377e1d6a2419b4be25/gffutils-0.8.7.1.tar.gz#sha256=0fd612cdf37b9aeb0d3504bd45acde1b00574554b84095a683688595337e94e6 (from https://pypi.org/simple/gffutils/), version: 0.8.7.1
2020-09-12T05:02:52,054   Found link https://files.pythonhosted.org/packages/b4/ea/54ca403a8d471849606fb432b9afcf73c8c5105ea2dd87b8d38bd5217c5a/gffutils-0.9.tar.gz#sha256=e1b0bf2b422ec3491be13d77bf7baf71d274abd844e8f8b6c1217a95b236218b (from https://pypi.org/simple/gffutils/), version: 0.9
2020-09-12T05:02:52,055   Found link https://files.pythonhosted.org/packages/f0/cb/bbbde7e179aa5efe13f51afbef13a85a53632d94fc97755a2819d4d251c6/gffutils-0.10.tar.gz#sha256=9b1f5f30d93754e8c67503b94878dbd7d113a5acf8d04c4c363aa8a78a506b2d (from https://pypi.org/simple/gffutils/), version: 0.10
2020-09-12T05:02:52,056   Found link https://files.pythonhosted.org/packages/87/d6/f893f14fd6cf1c9e758259f6e0f9ba1ae03370988d8f1a3ea8d790ca5b06/gffutils-0.10.1.tar.gz#sha256=a8fc39006d7aa353147238160640e2210b168f7849cb99896be3fc9441e351cb (from https://pypi.org/simple/gffutils/), version: 0.10.1
2020-09-12T05:02:52,072 Given no hashes to check 1 links for project 'gffutils': discarding no candidates
2020-09-12T05:02:52,073 Using version 0.10.1 (newest of versions: 0.10.1)
2020-09-12T05:02:52,082 Collecting gffutils==0.10.1
2020-09-12T05:02:52,088   Created temporary directory: /tmp/pip-unpack-5pby3gpl
2020-09-12T05:02:52,182   Downloading gffutils-0.10.1.tar.gz (1.5 MB)
2020-09-12T05:02:54,254   Added gffutils==0.10.1 from https://files.pythonhosted.org/packages/87/d6/f893f14fd6cf1c9e758259f6e0f9ba1ae03370988d8f1a3ea8d790ca5b06/gffutils-0.10.1.tar.gz#sha256=a8fc39006d7aa353147238160640e2210b168f7849cb99896be3fc9441e351cb to build tracker '/tmp/pip-req-tracker-dqy992ht'
2020-09-12T05:02:54,258     Running setup.py (path:/tmp/pip-wheel-gmosjgiq/gffutils/setup.py) egg_info for package gffutils
2020-09-12T05:02:54,261     Created temporary directory: /tmp/pip-pip-egg-info-g4hcq5ri
2020-09-12T05:02:54,262     Running command python setup.py egg_info
2020-09-12T05:02:56,326     running egg_info
2020-09-12T05:02:56,332     creating /tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info
2020-09-12T05:02:56,336     writing top-level names to /tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info/top_level.txt
2020-09-12T05:02:56,339     writing /tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info/PKG-INFO
2020-09-12T05:02:56,343     writing requirements to /tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info/requires.txt
2020-09-12T05:02:56,347     writing dependency_links to /tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info/dependency_links.txt
2020-09-12T05:02:56,351     writing manifest file '/tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info/SOURCES.txt'
2020-09-12T05:02:56,699     package init file 'gffutils/scripts/__init__.py' not found (or not a regular file)
2020-09-12T05:02:56,705     package init file 'gffutils/test/data/__init__.py' not found (or not a regular file)
2020-09-12T05:02:56,732     reading manifest file '/tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info/SOURCES.txt'
2020-09-12T05:02:56,735     reading manifest template 'MANIFEST.in'
2020-09-12T05:02:56,738     warning: no files found matching '*.rst' under directory 'docs/source'
2020-09-12T05:02:56,739     warning: no files found matching '*.py' under directory 'docs/source'
2020-09-12T05:02:56,740     warning: no files found matching '*' under directory 'docs/source/images'
2020-09-12T05:02:56,743     warning: no files found matching 'docs/Makefile'
2020-09-12T05:02:56,743     warning: no files found matching 'docs/make.bat'
2020-09-12T05:02:56,746     warning: no files found matching 'gffutils/test/data/__init__.py'
2020-09-12T05:02:56,748     warning: no files found matching 'gffutils/test/data/t.py'
2020-09-12T05:02:56,760     writing manifest file '/tmp/pip-pip-egg-info-g4hcq5ri/gffutils.egg-info/SOURCES.txt'
2020-09-12T05:02:56,896   Source in /tmp/pip-wheel-gmosjgiq/gffutils has version 0.10.1, which satisfies requirement gffutils==0.10.1 from https://files.pythonhosted.org/packages/87/d6/f893f14fd6cf1c9e758259f6e0f9ba1ae03370988d8f1a3ea8d790ca5b06/gffutils-0.10.1.tar.gz#sha256=a8fc39006d7aa353147238160640e2210b168f7849cb99896be3fc9441e351cb
2020-09-12T05:02:56,897   Removed gffutils==0.10.1 from https://files.pythonhosted.org/packages/87/d6/f893f14fd6cf1c9e758259f6e0f9ba1ae03370988d8f1a3ea8d790ca5b06/gffutils-0.10.1.tar.gz#sha256=a8fc39006d7aa353147238160640e2210b168f7849cb99896be3fc9441e351cb from build tracker '/tmp/pip-req-tracker-dqy992ht'
2020-09-12T05:02:56,901 Building wheels for collected packages: gffutils
2020-09-12T05:02:56,911   Created temporary directory: /tmp/pip-wheel-3_uyu73h
2020-09-12T05:02:56,912   Building wheel for gffutils (setup.py): started
2020-09-12T05:02:56,913   Destination directory: /tmp/pip-wheel-3_uyu73h
2020-09-12T05:02:56,914   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-gmosjgiq/gffutils/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-gmosjgiq/gffutils/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3_uyu73h
2020-09-12T05:02:59,008   running bdist_wheel
2020-09-12T05:02:59,023   running build
2020-09-12T05:02:59,024   running build_py
2020-09-12T05:02:59,364   creating build
2020-09-12T05:02:59,365   creating build/lib
2020-09-12T05:02:59,367   creating build/lib/gffutils
2020-09-12T05:02:59,369   copying gffutils/biopython_integration.py -> build/lib/gffutils
2020-09-12T05:02:59,374   copying gffutils/__init__.py -> build/lib/gffutils
2020-09-12T05:02:59,378   copying gffutils/helpers.py -> build/lib/gffutils
2020-09-12T05:02:59,384   copying gffutils/bins.py -> build/lib/gffutils
2020-09-12T05:02:59,389   copying gffutils/merge_criteria.py -> build/lib/gffutils
2020-09-12T05:02:59,393   copying gffutils/create.py -> build/lib/gffutils
2020-09-12T05:02:59,403   copying gffutils/parser.py -> build/lib/gffutils
2020-09-12T05:02:59,410   copying gffutils/iterators.py -> build/lib/gffutils
2020-09-12T05:02:59,417   copying gffutils/convert.py -> build/lib/gffutils
2020-09-12T05:02:59,422   copying gffutils/feature.py -> build/lib/gffutils
2020-09-12T05:02:59,429   copying gffutils/exceptions.py -> build/lib/gffutils
2020-09-12T05:02:59,434   copying gffutils/constants.py -> build/lib/gffutils
2020-09-12T05:02:59,440   copying gffutils/pybedtools_integration.py -> build/lib/gffutils
2020-09-12T05:02:59,447   copying gffutils/inspect.py -> build/lib/gffutils
2020-09-12T05:02:59,452   copying gffutils/interface.py -> build/lib/gffutils
2020-09-12T05:02:59,464   copying gffutils/attributes.py -> build/lib/gffutils
2020-09-12T05:02:59,469   copying gffutils/gffwriter.py -> build/lib/gffutils
2020-09-12T05:02:59,475   copying gffutils/version.py -> build/lib/gffutils
2020-09-12T05:02:59,479   package init file 'gffutils/scripts/__init__.py' not found (or not a regular file)
2020-09-12T05:02:59,482   creating build/lib/gffutils/scripts
2020-09-12T05:02:59,485   copying gffutils/scripts/gffutils-flybase-convert.py -> build/lib/gffutils/scripts
2020-09-12T05:02:59,495   creating build/lib/gffutils/test
2020-09-12T05:02:59,497   copying gffutils/test/__init__.py -> build/lib/gffutils/test
2020-09-12T05:02:59,501   copying gffutils/test/helpers_test.py -> build/lib/gffutils/test
2020-09-12T05:02:59,505   copying gffutils/test/feature_test.py -> build/lib/gffutils/test
2020-09-12T05:02:59,509   copying gffutils/test/attr_test_cases.py -> build/lib/gffutils/test
2020-09-12T05:02:59,514   copying gffutils/test/test_merge_all.py -> build/lib/gffutils/test
2020-09-12T05:02:59,519   copying gffutils/test/test_biopython_integration.py -> build/lib/gffutils/test
2020-09-12T05:02:59,524   copying gffutils/test/synth_test_base.py -> build/lib/gffutils/test
2020-09-12T05:02:59,530   copying gffutils/test/expected.py -> build/lib/gffutils/test
2020-09-12T05:02:59,536   copying gffutils/test/test.py -> build/lib/gffutils/test
2020-09-12T05:02:59,547   copying gffutils/test/performance_test.py -> build/lib/gffutils/test
2020-09-12T05:02:59,553   copying gffutils/test/parser_test.py -> build/lib/gffutils/test
2020-09-12T05:02:59,560   copying gffutils/test/test_merge.py -> build/lib/gffutils/test
2020-09-12T05:02:59,565   package init file 'gffutils/test/data/__init__.py' not found (or not a regular file)
2020-09-12T05:02:59,587   creating build/lib/gffutils/test/data
2020-09-12T05:02:59,589   copying gffutils/test/data/FBgn0031208.gtf -> build/lib/gffutils/test/data
2020-09-12T05:02:59,594   copying gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> build/lib/gffutils/test/data
2020-09-12T05:02:59,599   copying gffutils/test/data/nonascii -> build/lib/gffutils/test/data
2020-09-12T05:02:59,605   copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt -> build/lib/gffutils/test/data
2020-09-12T05:02:59,621   copying gffutils/test/data/gff_example1.gff3 -> build/lib/gffutils/test/data
2020-09-12T05:02:59,628   copying gffutils/test/data/hybrid1.gff3 -> build/lib/gffutils/test/data
2020-09-12T05:02:59,632   copying gffutils/test/data/gencode.vM8.5000_gene_ids.txt -> build/lib/gffutils/test/data
2020-09-12T05:02:59,648   copying gffutils/test/data/mouse_extra_comma.gff3 -> build/lib/gffutils/test/data
2020-09-12T05:02:59,654   copying gffutils/test/data/gff_example1.gff3.gz -> build/lib/gffutils/test/data
2020-09-12T05:02:59,661   copying gffutils/test/data/keep-order-test.gtf -> build/lib/gffutils/test/data
2020-09-12T05:02:59,667   copying gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> build/lib/gffutils/test/data
2020-09-12T05:03:00,512   copying gffutils/test/data/keyval_sep_in_attrs.gff -> build/lib/gffutils/test/data
2020-09-12T05:03:00,517   copying gffutils/test/data/gencode.vM8.chromsizes.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,523   copying gffutils/test/data/download-large-annotation-files.sh -> build/lib/gffutils/test/data
2020-09-12T05:03:00,528   copying gffutils/test/data/ensembl_gtf.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,536   copying gffutils/test/data/unsanitized.gff -> build/lib/gffutils/test/data
2020-09-12T05:03:00,544   copying gffutils/test/data/glimmer_nokeyval.gff3 -> build/lib/gffutils/test/data
2020-09-12T05:03:00,551   copying gffutils/test/data/random-chr.gff -> build/lib/gffutils/test/data
2020-09-12T05:03:00,562   copying gffutils/test/data/intro_docs_example.gff -> build/lib/gffutils/test/data
2020-09-12T05:03:00,569   copying gffutils/test/data/FBgn0031208.gff -> build/lib/gffutils/test/data
2020-09-12T05:03:00,577   copying gffutils/test/data/ncbi_gff3.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,585   copying gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,594   copying gffutils/test/data/c_elegans_WS199_ann_gff.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,601   copying gffutils/test/data/wormbase_gff2_alt.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,608   copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,614   copying gffutils/test/data/synthetic.gff3 -> build/lib/gffutils/test/data
2020-09-12T05:03:00,619   copying gffutils/test/data/dm6-chr2L.fa -> build/lib/gffutils/test/data
2020-09-12T05:03:00,624   copying gffutils/test/data/wormbase_gff2.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,630   copying gffutils/test/data/F3-unique-3.v2.gff -> build/lib/gffutils/test/data
2020-09-12T05:03:00,639   copying gffutils/test/data/gencode-v19.gtf -> build/lib/gffutils/test/data
2020-09-12T05:03:00,647   copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,660   copying gffutils/test/data/gencode.vM8.5000_transcript_ids.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,676   copying gffutils/test/data/jgi_gff2.txt -> build/lib/gffutils/test/data
2020-09-12T05:03:00,694   running build_scripts
2020-09-12T05:03:00,695   creating build/scripts-3.5
2020-09-12T05:03:00,698   copying and adjusting gffutils/scripts/gffutils-cli -> build/scripts-3.5
2020-09-12T05:03:00,703   changing mode of build/scripts-3.5/gffutils-cli from 644 to 755
2020-09-12T05:03:00,709   installing to build/bdist.linux-armv7l/wheel
2020-09-12T05:03:00,710   running install
2020-09-12T05:03:00,712   running install_lib
2020-09-12T05:03:00,720   creating build/bdist.linux-armv7l
2020-09-12T05:03:00,720   creating build/bdist.linux-armv7l/wheel
2020-09-12T05:03:00,725   creating build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,727   copying build/lib/gffutils/biopython_integration.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,732   copying build/lib/gffutils/__init__.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,738   copying build/lib/gffutils/helpers.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,746   copying build/lib/gffutils/bins.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,752   copying build/lib/gffutils/merge_criteria.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,758   copying build/lib/gffutils/create.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,769   copying build/lib/gffutils/parser.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,776   copying build/lib/gffutils/iterators.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,783   copying build/lib/gffutils/convert.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,789   copying build/lib/gffutils/feature.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,796   copying build/lib/gffutils/exceptions.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,802   copying build/lib/gffutils/constants.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,807   copying build/lib/gffutils/pybedtools_integration.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,814   copying build/lib/gffutils/inspect.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,820   copying build/lib/gffutils/interface.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,832   copying build/lib/gffutils/attributes.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,839   creating build/bdist.linux-armv7l/wheel/gffutils/scripts
2020-09-12T05:03:00,841   copying build/lib/gffutils/scripts/gffutils-flybase-convert.py -> build/bdist.linux-armv7l/wheel/gffutils/scripts
2020-09-12T05:03:00,849   copying build/lib/gffutils/gffwriter.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:00,857   creating build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:00,860   copying build/lib/gffutils/test/__init__.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:00,868   creating build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,871   copying build/lib/gffutils/test/data/FBgn0031208.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,879   copying build/lib/gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,884   copying build/lib/gffutils/test/data/nonascii -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,891   copying build/lib/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,907   copying build/lib/gffutils/test/data/gff_example1.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,913   copying build/lib/gffutils/test/data/hybrid1.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,919   copying build/lib/gffutils/test/data/gencode.vM8.5000_gene_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,936   copying build/lib/gffutils/test/data/mouse_extra_comma.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,941   copying build/lib/gffutils/test/data/gff_example1.gff3.gz -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,947   copying build/lib/gffutils/test/data/keep-order-test.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:00,952   copying build/lib/gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,785   copying build/lib/gffutils/test/data/keyval_sep_in_attrs.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,790   copying build/lib/gffutils/test/data/gencode.vM8.chromsizes.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,796   copying build/lib/gffutils/test/data/download-large-annotation-files.sh -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,801   copying build/lib/gffutils/test/data/ensembl_gtf.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,808   copying build/lib/gffutils/test/data/unsanitized.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,813   copying build/lib/gffutils/test/data/glimmer_nokeyval.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,818   copying build/lib/gffutils/test/data/random-chr.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,824   copying build/lib/gffutils/test/data/intro_docs_example.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,830   copying build/lib/gffutils/test/data/FBgn0031208.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,836   copying build/lib/gffutils/test/data/ncbi_gff3.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,842   copying build/lib/gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,850   copying build/lib/gffutils/test/data/c_elegans_WS199_ann_gff.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,855   copying build/lib/gffutils/test/data/wormbase_gff2_alt.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,860   copying build/lib/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,865   copying build/lib/gffutils/test/data/synthetic.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,869   copying build/lib/gffutils/test/data/dm6-chr2L.fa -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,873   copying build/lib/gffutils/test/data/wormbase_gff2.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,878   copying build/lib/gffutils/test/data/F3-unique-3.v2.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,885   copying build/lib/gffutils/test/data/gencode-v19.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,891   copying build/lib/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,904   copying build/lib/gffutils/test/data/gencode.vM8.5000_transcript_ids.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,920   copying build/lib/gffutils/test/data/jgi_gff2.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data
2020-09-12T05:03:01,926   copying build/lib/gffutils/test/helpers_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,931   copying build/lib/gffutils/test/feature_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,938   copying build/lib/gffutils/test/attr_test_cases.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,944   copying build/lib/gffutils/test/test_merge_all.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,950   copying build/lib/gffutils/test/test_biopython_integration.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,955   copying build/lib/gffutils/test/synth_test_base.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,961   copying build/lib/gffutils/test/expected.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,966   copying build/lib/gffutils/test/test.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,975   copying build/lib/gffutils/test/performance_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,980   copying build/lib/gffutils/test/parser_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,985   copying build/lib/gffutils/test/test_merge.py -> build/bdist.linux-armv7l/wheel/gffutils/test
2020-09-12T05:03:01,992   copying build/lib/gffutils/version.py -> build/bdist.linux-armv7l/wheel/gffutils
2020-09-12T05:03:01,996   running install_egg_info
2020-09-12T05:03:02,044   running egg_info
2020-09-12T05:03:02,045   writing top-level names to gffutils.egg-info/top_level.txt
2020-09-12T05:03:02,047   writing dependency_links to gffutils.egg-info/dependency_links.txt
2020-09-12T05:03:02,051   writing gffutils.egg-info/PKG-INFO
2020-09-12T05:03:02,055   writing requirements to gffutils.egg-info/requires.txt
2020-09-12T05:03:02,075   reading manifest file 'gffutils.egg-info/SOURCES.txt'
2020-09-12T05:03:02,082   reading manifest template 'MANIFEST.in'
2020-09-12T05:03:02,084   warning: no files found matching '*.rst' under directory 'docs/source'
2020-09-12T05:03:02,085   warning: no files found matching '*.py' under directory 'docs/source'
2020-09-12T05:03:02,087   warning: no files found matching '*' under directory 'docs/source/images'
2020-09-12T05:03:02,089   warning: no files found matching 'docs/Makefile'
2020-09-12T05:03:02,089   warning: no files found matching 'docs/make.bat'
2020-09-12T05:03:02,092   warning: no files found matching 'gffutils/test/data/__init__.py'
2020-09-12T05:03:02,093   warning: no files found matching 'gffutils/test/data/t.py'
2020-09-12T05:03:02,110   writing manifest file 'gffutils.egg-info/SOURCES.txt'
2020-09-12T05:03:02,114   Copying gffutils.egg-info to build/bdist.linux-armv7l/wheel/gffutils-0.10.1-py3.5.egg-info
2020-09-12T05:03:02,142   running install_scripts
2020-09-12T05:03:02,288   creating build/bdist.linux-armv7l/wheel/gffutils-0.10.1.data
2020-09-12T05:03:02,289   creating build/bdist.linux-armv7l/wheel/gffutils-0.10.1.data/scripts
2020-09-12T05:03:02,292   copying build/scripts-3.5/gffutils-cli -> build/bdist.linux-armv7l/wheel/gffutils-0.10.1.data/scripts
2020-09-12T05:03:02,298   changing mode of build/bdist.linux-armv7l/wheel/gffutils-0.10.1.data/scripts/gffutils-cli to 755
2020-09-12T05:03:02,369   creating build/bdist.linux-armv7l/wheel/gffutils-0.10.1.dist-info/WHEEL
2020-09-12T05:03:04,327   Building wheel for gffutils (setup.py): finished with status 'done'
2020-09-12T05:03:04,358   Created wheel for gffutils: filename=gffutils-0.10.1-py3-none-any.whl size=1608723 sha256=5ef49126fc2ce3888acab72b8de390a1851ee39c7e97c44e04a3bd67c2d785cb
2020-09-12T05:03:04,359   Stored in directory: /tmp/pip-ephem-wheel-cache-s7z346tt/wheels/3b/c7/b5/c644af6664c582888fc11a28493f47b56ac511bec83eaf1964
2020-09-12T05:03:04,363 Successfully built gffutils
2020-09-12T05:03:04,649 Removed build tracker: '/tmp/pip-req-tracker-dqy992ht'