2020-09-18T23:00:46,345 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-18T23:00:47,126 Created temporary directory: /tmp/pip-ephem-wheel-cache-9nbwn5e3
2020-09-18T23:00:47,131 Created temporary directory: /tmp/pip-req-tracker-rhgjmc5o
2020-09-18T23:00:47,131 Initialized build tracking at /tmp/pip-req-tracker-rhgjmc5o
2020-09-18T23:00:47,132 Created build tracker: /tmp/pip-req-tracker-rhgjmc5o
2020-09-18T23:00:47,132 Entered build tracker: /tmp/pip-req-tracker-rhgjmc5o
2020-09-18T23:00:47,134 Created temporary directory: /tmp/pip-wheel-gztm9om_
2020-09-18T23:00:47,153 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-09-18T23:00:47,156 2 location(s) to search for versions of deepblast:
2020-09-18T23:00:47,156 * https://pypi.org/simple/deepblast/
2020-09-18T23:00:47,156 * https://pypi.ngc.nvidia.com/deepblast/
2020-09-18T23:00:47,156 Fetching project page and analyzing links: https://pypi.org/simple/deepblast/
2020-09-18T23:00:47,159 Getting page https://pypi.org/simple/deepblast/
2020-09-18T23:00:47,163 Found index url https://pypi.org/simple
2020-09-18T23:00:47,481   Found link https://files.pythonhosted.org/packages/b2/96/06b83c3d1db2e04b0e418d3e47b621a307b2ea325662855b146fd5642093/deepblast-0.1.0.tar.gz#sha256=9b9bfbba5d0ed680583b610ab5a54f2b9e3ac25ef28c7db6a085d69f072425d7 (from https://pypi.org/simple/deepblast/), version: 0.1.0
2020-09-18T23:00:47,482 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/deepblast/
2020-09-18T23:00:47,483 Getting page https://pypi.ngc.nvidia.com/deepblast/
2020-09-18T23:00:47,486 Found index url https://pypi.ngc.nvidia.com
2020-09-18T23:00:48,483 Could not fetch URL https://pypi.ngc.nvidia.com/deepblast/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/deepblast/ - skipping
2020-09-18T23:00:48,497 Given no hashes to check 1 links for project 'deepblast': discarding no candidates
2020-09-18T23:00:48,499 Using version 0.1.0 (newest of versions: 0.1.0)
2020-09-18T23:00:48,533 Collecting deepblast==0.1.0
2020-09-18T23:00:48,563   Created temporary directory: /tmp/pip-unpack-xwx46cam
2020-09-18T23:00:48,795   Downloading deepblast-0.1.0.tar.gz (31 kB)
2020-09-18T23:00:49,042   Added deepblast==0.1.0 from https://files.pythonhosted.org/packages/b2/96/06b83c3d1db2e04b0e418d3e47b621a307b2ea325662855b146fd5642093/deepblast-0.1.0.tar.gz#sha256=9b9bfbba5d0ed680583b610ab5a54f2b9e3ac25ef28c7db6a085d69f072425d7 to build tracker '/tmp/pip-req-tracker-rhgjmc5o'
2020-09-18T23:00:49,044     Running setup.py (path:/tmp/pip-wheel-gztm9om_/deepblast/setup.py) egg_info for package deepblast
2020-09-18T23:00:49,046     Created temporary directory: /tmp/pip-pip-egg-info-yxfig0y7
2020-09-18T23:00:49,046     Running command python setup.py egg_info
2020-09-18T23:00:51,529     running egg_info
2020-09-18T23:00:51,534     creating /tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info
2020-09-18T23:00:51,539     writing top-level names to /tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info/top_level.txt
2020-09-18T23:00:51,541     writing /tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info/PKG-INFO
2020-09-18T23:00:51,546     writing requirements to /tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info/requires.txt
2020-09-18T23:00:51,548     writing dependency_links to /tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info/dependency_links.txt
2020-09-18T23:00:51,552     writing manifest file '/tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info/SOURCES.txt'
2020-09-18T23:00:51,931     reading manifest file '/tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info/SOURCES.txt'
2020-09-18T23:00:51,941     writing manifest file '/tmp/pip-pip-egg-info-yxfig0y7/deepblast.egg-info/SOURCES.txt'
2020-09-18T23:00:52,082   Source in /tmp/pip-wheel-gztm9om_/deepblast has version 0.1.0, which satisfies requirement deepblast==0.1.0 from https://files.pythonhosted.org/packages/b2/96/06b83c3d1db2e04b0e418d3e47b621a307b2ea325662855b146fd5642093/deepblast-0.1.0.tar.gz#sha256=9b9bfbba5d0ed680583b610ab5a54f2b9e3ac25ef28c7db6a085d69f072425d7
2020-09-18T23:00:52,084   Removed deepblast==0.1.0 from https://files.pythonhosted.org/packages/b2/96/06b83c3d1db2e04b0e418d3e47b621a307b2ea325662855b146fd5642093/deepblast-0.1.0.tar.gz#sha256=9b9bfbba5d0ed680583b610ab5a54f2b9e3ac25ef28c7db6a085d69f072425d7 from build tracker '/tmp/pip-req-tracker-rhgjmc5o'
2020-09-18T23:00:52,088 Building wheels for collected packages: deepblast
2020-09-18T23:00:52,097   Created temporary directory: /tmp/pip-wheel-9d08k5zb
2020-09-18T23:00:52,098   Building wheel for deepblast (setup.py): started
2020-09-18T23:00:52,099   Destination directory: /tmp/pip-wheel-9d08k5zb
2020-09-18T23:00:52,099   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-gztm9om_/deepblast/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-gztm9om_/deepblast/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9d08k5zb
2020-09-18T23:00:54,570   running bdist_wheel
2020-09-18T23:00:54,586   running build
2020-09-18T23:00:54,587   running build_py
2020-09-18T23:00:54,928   creating build
2020-09-18T23:00:54,929   creating build/lib
2020-09-18T23:00:54,931   creating build/lib/deepblast
2020-09-18T23:00:54,934   copying deepblast/utils.py -> build/lib/deepblast
2020-09-18T23:00:54,939   copying deepblast/losses.py -> build/lib/deepblast
2020-09-18T23:00:54,944   copying deepblast/language_model.py -> build/lib/deepblast
2020-09-18T23:00:54,950   copying deepblast/ops.py -> build/lib/deepblast
2020-09-18T23:00:54,956   copying deepblast/embedding.py -> build/lib/deepblast
2020-09-18T23:00:54,963   copying deepblast/constants.py -> build/lib/deepblast
2020-09-18T23:00:54,968   copying deepblast/__init__.py -> build/lib/deepblast
2020-09-18T23:00:54,971   copying deepblast/nw.py -> build/lib/deepblast
2020-09-18T23:00:54,977   copying deepblast/sim.py -> build/lib/deepblast
2020-09-18T23:00:54,982   copying deepblast/nw_cuda.py -> build/lib/deepblast
2020-09-18T23:00:54,987   copying deepblast/score.py -> build/lib/deepblast
2020-09-18T23:00:54,994   copying deepblast/alignment.py -> build/lib/deepblast
2020-09-18T23:00:55,001   copying deepblast/trainer.py -> build/lib/deepblast
2020-09-18T23:00:55,010   creating build/lib/deepblast/dataset
2020-09-18T23:00:55,013   copying deepblast/dataset/utils.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,019   copying deepblast/dataset/alphabet.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,024   copying deepblast/dataset/tm_align.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,028   copying deepblast/dataset/parse_mali.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,033   copying deepblast/dataset/parse_tm_align.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,038   copying deepblast/dataset/parse_blast.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,043   copying deepblast/dataset/dataset.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,048   copying deepblast/dataset/__init__.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,054   copying deepblast/dataset/parse_fatcat.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,060   copying deepblast/dataset/parse_hmmer.py -> build/lib/deepblast/dataset
2020-09-18T23:00:55,072   running build_scripts
2020-09-18T23:00:55,073   creating build/scripts-3.5
2020-09-18T23:00:55,077   copying scripts/hmm-simulate -> build/scripts-3.5
2020-09-18T23:00:55,082   copying and adjusting scripts/deepblast-train -> build/scripts-3.5
2020-09-18T23:00:55,086   copying and adjusting scripts/deepblast-search -> build/scripts-3.5
2020-09-18T23:00:55,090   copying and adjusting scripts/deepblast-evaluate -> build/scripts-3.5
2020-09-18T23:00:55,092   changing mode of build/scripts-3.5/hmm-simulate from 644 to 755
2020-09-18T23:00:55,093   changing mode of build/scripts-3.5/deepblast-train from 644 to 755
2020-09-18T23:00:55,094   changing mode of build/scripts-3.5/deepblast-search from 644 to 755
2020-09-18T23:00:55,095   changing mode of build/scripts-3.5/deepblast-evaluate from 644 to 755
2020-09-18T23:00:55,103   installing to build/bdist.linux-armv7l/wheel
2020-09-18T23:00:55,104   running install
2020-09-18T23:00:55,105   running install_lib
2020-09-18T23:00:55,114   creating build/bdist.linux-armv7l
2020-09-18T23:00:55,115   creating build/bdist.linux-armv7l/wheel
2020-09-18T23:00:55,119   creating build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,122   copying build/lib/deepblast/utils.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,128   creating build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,130   copying build/lib/deepblast/dataset/utils.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,137   copying build/lib/deepblast/dataset/alphabet.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,143   copying build/lib/deepblast/dataset/tm_align.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,149   copying build/lib/deepblast/dataset/parse_mali.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,155   copying build/lib/deepblast/dataset/parse_tm_align.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,160   copying build/lib/deepblast/dataset/parse_blast.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,164   copying build/lib/deepblast/dataset/dataset.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,170   copying build/lib/deepblast/dataset/__init__.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,175   copying build/lib/deepblast/dataset/parse_fatcat.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,181   copying build/lib/deepblast/dataset/parse_hmmer.py -> build/bdist.linux-armv7l/wheel/deepblast/dataset
2020-09-18T23:00:55,186   copying build/lib/deepblast/losses.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,192   copying build/lib/deepblast/language_model.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,198   copying build/lib/deepblast/ops.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,202   copying build/lib/deepblast/embedding.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,207   copying build/lib/deepblast/constants.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,211   copying build/lib/deepblast/__init__.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,215   copying build/lib/deepblast/nw.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,223   copying build/lib/deepblast/sim.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,229   copying build/lib/deepblast/nw_cuda.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,235   copying build/lib/deepblast/score.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,241   copying build/lib/deepblast/alignment.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,246   copying build/lib/deepblast/trainer.py -> build/bdist.linux-armv7l/wheel/deepblast
2020-09-18T23:00:55,252   running install_egg_info
2020-09-18T23:00:55,307   running egg_info
2020-09-18T23:00:55,309   writing deepblast.egg-info/PKG-INFO
2020-09-18T23:00:55,313   writing dependency_links to deepblast.egg-info/dependency_links.txt
2020-09-18T23:00:55,317   writing requirements to deepblast.egg-info/requires.txt
2020-09-18T23:00:55,320   writing top-level names to deepblast.egg-info/top_level.txt
2020-09-18T23:00:55,333   reading manifest file 'deepblast.egg-info/SOURCES.txt'
2020-09-18T23:00:55,346   writing manifest file 'deepblast.egg-info/SOURCES.txt'
2020-09-18T23:00:55,350   Copying deepblast.egg-info to build/bdist.linux-armv7l/wheel/deepblast-0.1.0-py3.5.egg-info
2020-09-18T23:00:55,374   running install_scripts
2020-09-18T23:00:55,502   creating build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data
2020-09-18T23:00:55,503   creating build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts
2020-09-18T23:00:55,506   copying build/scripts-3.5/hmm-simulate -> build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts
2020-09-18T23:00:55,511   copying build/scripts-3.5/deepblast-train -> build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts
2020-09-18T23:00:55,515   copying build/scripts-3.5/deepblast-search -> build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts
2020-09-18T23:00:55,520   copying build/scripts-3.5/deepblast-evaluate -> build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts
2020-09-18T23:00:55,524   changing mode of build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts/hmm-simulate to 755
2020-09-18T23:00:55,524   changing mode of build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts/deepblast-train to 755
2020-09-18T23:00:55,525   changing mode of build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts/deepblast-search to 755
2020-09-18T23:00:55,526   changing mode of build/bdist.linux-armv7l/wheel/deepblast-0.1.0.data/scripts/deepblast-evaluate to 755
2020-09-18T23:00:55,598   creating build/bdist.linux-armv7l/wheel/deepblast-0.1.0.dist-info/WHEEL
2020-09-18T23:00:55,934   Building wheel for deepblast (setup.py): finished with status 'done'
2020-09-18T23:00:55,939   Created wheel for deepblast: filename=deepblast-0.1.0-py3-none-any.whl size=39314 sha256=f5319ade928adeb86009534924c7139fa1bed7fe65d5eb7643dfb6243364452e
2020-09-18T23:00:55,940   Stored in directory: /tmp/pip-ephem-wheel-cache-9nbwn5e3/wheels/76/67/40/8cbbc8a2d8a71fc342a61220d29cf643e6fe9deefa4b0d342c
2020-09-18T23:00:55,944 Successfully built deepblast
2020-09-18T23:00:55,958 Removed build tracker: '/tmp/pip-req-tracker-rhgjmc5o'