2020-09-19T13:47:57,154 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-19T13:47:57,885 Created temporary directory: /tmp/pip-ephem-wheel-cache-q0l2vttf
2020-09-19T13:47:57,890 Created temporary directory: /tmp/pip-req-tracker-2hktacnk
2020-09-19T13:47:57,891 Initialized build tracking at /tmp/pip-req-tracker-2hktacnk
2020-09-19T13:47:57,892 Created build tracker: /tmp/pip-req-tracker-2hktacnk
2020-09-19T13:47:57,892 Entered build tracker: /tmp/pip-req-tracker-2hktacnk
2020-09-19T13:47:57,893 Created temporary directory: /tmp/pip-wheel-nnlta9yr
2020-09-19T13:47:57,913 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-09-19T13:47:57,916 2 location(s) to search for versions of rcsb-utils-chemref:
2020-09-19T13:47:57,916 * https://pypi.org/simple/rcsb-utils-chemref/
2020-09-19T13:47:57,916 * https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-09-19T13:47:57,916 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chemref/
2020-09-19T13:47:57,919 Getting page https://pypi.org/simple/rcsb-utils-chemref/
2020-09-19T13:47:57,923 Found index url https://pypi.org/simple
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2020-09-19T13:47:58,426   Found link https://files.pythonhosted.org/packages/ea/4c/1530e5a67b29d76a9a1a1d5d34ffdcfdd79694f86eab3d0984348bc9d220/rcsb.utils.chemref-0.44-py2.py3-none-any.whl#sha256=d0658b9b896686778045389403cba5fb633ac2c71f4b64125911ede091856870 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.44
2020-09-19T13:47:58,427   Found link https://files.pythonhosted.org/packages/e9/03/ea6706d264e457a2a93ec8047c8b0a002993f222c47d6b96c3ae397b3c7f/rcsb.utils.chemref-0.44.tar.gz#sha256=3fa123b28c96ac12155ea3fcf5974824b9eda78a6a7be831a3ec7393da1a7bf5 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.44
2020-09-19T13:47:58,428   Found link https://files.pythonhosted.org/packages/27/6e/08589ef1bfeb7587346dcbf729353e51c6e9da903978d2d8320736d7d6d4/rcsb.utils.chemref-0.45-py2.py3-none-any.whl#sha256=8c63269d14614bf3067c727660d32bb3bf00046d7933eef5ca27d179a6e0d966 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.45
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2020-09-19T13:47:58,430   Found link https://files.pythonhosted.org/packages/3f/3f/2612f1a35da9569a7d01d4bdc9bc7550b671d80eec76df1332e80e3e3fe1/rcsb.utils.chemref-0.47-py2.py3-none-any.whl#sha256=ffacfe9b9ef3f73dbcab6295475fe0f98c9fb0f392ea3a47a81252599af2c695 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.47
2020-09-19T13:47:58,431   Found link https://files.pythonhosted.org/packages/74/fa/7ed7bb2ad4f2959ebddedbcb587cdfc9303088f81ba409722c5fec146edc/rcsb.utils.chemref-0.47.tar.gz#sha256=d230755682137a0bd1ee32735b8f6c84fb425961f23b7cf126b9f5741086cf58 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.47
2020-09-19T13:47:58,432   Found link https://files.pythonhosted.org/packages/8b/6c/442665e99d750e62bdf90e293ada2d303ec28740af7ffbe9f310b76ea1c1/rcsb.utils.chemref-0.48.tar.gz#sha256=49fca12e4ec80e38808e7c3bb01b7830bc5ac092c5fa8d2255ccf573c4900bc7 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.48
2020-09-19T13:47:58,433   Found link https://files.pythonhosted.org/packages/9f/08/9b57eaf838abb2e6a5b9fd76cc453fb27a1e9413510d8d60179f3694e5bb/rcsb.utils.chemref-0.49.tar.gz#sha256=3d8ab2b768c8e971df1f8347b4df61da33b6b426e7eb3fc6ff14597b00e3ed5f (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.49
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2020-09-19T13:47:58,435   Found link https://files.pythonhosted.org/packages/91/07/1a24cdfa9a955ee535b484014b0e9889c3b45c678a0ef6b67442b9b1ddbc/rcsb.utils.chemref-0.51.tar.gz#sha256=a3c5a92b9e454822b94b2d59498b8423a64dd0e00c8edfea5e88b46c00a9d096 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.51
2020-09-19T13:47:58,436   Found link https://files.pythonhosted.org/packages/17/11/cf8ffe90faaaafe4e501ee4b8356d7f51d5709cf82b1e0a8040e41e65d85/rcsb.utils.chemref-0.52.tar.gz#sha256=1ba76cdad2f1f9e4edad37a3129aca6fffd2ae2987a86fe5da4f1299aaa16c04 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.52
2020-09-19T13:47:58,437   Found link https://files.pythonhosted.org/packages/13/eb/ee5deb570d264a2cedfdf7fe4e73e90ece07051bd173974d9cd2705926d5/rcsb.utils.chemref-0.53.tar.gz#sha256=590e54a47d5b9f170c9ac8ff31c5423d1dfbae27fe960941419dbec804cfbbf7 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.53
2020-09-19T13:47:58,438   Found link https://files.pythonhosted.org/packages/7c/96/37590c0c6dc44c3bd3af65a5025456102685cd0749bd6d72dbe00ef85805/rcsb.utils.chemref-0.54.tar.gz#sha256=a89646f628d195b0e587aaf16b5a90ec92bcd0f9153821c53cc2820a45621468 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.54
2020-09-19T13:47:58,439   Found link https://files.pythonhosted.org/packages/37/73/5e92fe29a758cdf653ea420b8b8c0dfe9dd44dc67762b2863d128f5da235/rcsb.utils.chemref-0.55.tar.gz#sha256=5337169e83993f971726e891cca94b7110aacd718f8dad90a4bddfbd02dd931f (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.55
2020-09-19T13:47:58,439   Found link https://files.pythonhosted.org/packages/40/f7/6c1001dbea3fc5206778f063778027bd7fdfbd4e36ab95e2bda70c574a50/rcsb.utils.chemref-0.56.tar.gz#sha256=ad2b1e1657f8171f9de326d700cf81227fc68b5b7a1b5585136df240ca7e319f (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.56
2020-09-19T13:47:58,440 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-09-19T13:47:58,441 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-09-19T13:47:58,444 Found index url https://pypi.ngc.nvidia.com
2020-09-19T13:47:59,339 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-chemref/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-chemref/ - skipping
2020-09-19T13:47:59,389 Given no hashes to check 1 links for project 'rcsb-utils-chemref': discarding no candidates
2020-09-19T13:47:59,392 Using version 0.56 (newest of versions: 0.56)
2020-09-19T13:47:59,401 Collecting rcsb-utils-chemref==0.56
2020-09-19T13:47:59,407   Created temporary directory: /tmp/pip-unpack-tznx_g6r
2020-09-19T13:47:59,636   Downloading rcsb.utils.chemref-0.56.tar.gz (29 kB)
2020-09-19T13:47:59,855   Added rcsb-utils-chemref==0.56 from https://files.pythonhosted.org/packages/40/f7/6c1001dbea3fc5206778f063778027bd7fdfbd4e36ab95e2bda70c574a50/rcsb.utils.chemref-0.56.tar.gz#sha256=ad2b1e1657f8171f9de326d700cf81227fc68b5b7a1b5585136df240ca7e319f to build tracker '/tmp/pip-req-tracker-2hktacnk'
2020-09-19T13:47:59,858     Running setup.py (path:/tmp/pip-wheel-nnlta9yr/rcsb-utils-chemref/setup.py) egg_info for package rcsb-utils-chemref
2020-09-19T13:47:59,861     Created temporary directory: /tmp/pip-pip-egg-info-_jkl4exy
2020-09-19T13:47:59,861     Running command python setup.py egg_info
2020-09-19T13:48:02,376     running egg_info
2020-09-19T13:48:02,382     creating /tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info
2020-09-19T13:48:02,385     writing dependency_links to /tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/dependency_links.txt
2020-09-19T13:48:02,389     writing top-level names to /tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/top_level.txt
2020-09-19T13:48:02,391     writing entry points to /tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/entry_points.txt
2020-09-19T13:48:02,393     writing /tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/PKG-INFO
2020-09-19T13:48:02,399     writing requirements to /tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/requires.txt
2020-09-19T13:48:02,402     writing manifest file '/tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-09-19T13:48:02,771     reading manifest file '/tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-09-19T13:48:02,774     reading manifest template 'MANIFEST.in'
2020-09-19T13:48:02,782     writing manifest file '/tmp/pip-pip-egg-info-_jkl4exy/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-09-19T13:48:02,921   Source in /tmp/pip-wheel-nnlta9yr/rcsb-utils-chemref has version 0.56, which satisfies requirement rcsb-utils-chemref==0.56 from https://files.pythonhosted.org/packages/40/f7/6c1001dbea3fc5206778f063778027bd7fdfbd4e36ab95e2bda70c574a50/rcsb.utils.chemref-0.56.tar.gz#sha256=ad2b1e1657f8171f9de326d700cf81227fc68b5b7a1b5585136df240ca7e319f
2020-09-19T13:48:02,923   Removed rcsb-utils-chemref==0.56 from https://files.pythonhosted.org/packages/40/f7/6c1001dbea3fc5206778f063778027bd7fdfbd4e36ab95e2bda70c574a50/rcsb.utils.chemref-0.56.tar.gz#sha256=ad2b1e1657f8171f9de326d700cf81227fc68b5b7a1b5585136df240ca7e319f from build tracker '/tmp/pip-req-tracker-2hktacnk'
2020-09-19T13:48:02,927 Building wheels for collected packages: rcsb-utils-chemref
2020-09-19T13:48:02,935   Created temporary directory: /tmp/pip-wheel-e908h12q
2020-09-19T13:48:02,937   Building wheel for rcsb-utils-chemref (setup.py): started
2020-09-19T13:48:02,937   Destination directory: /tmp/pip-wheel-e908h12q
2020-09-19T13:48:02,938   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-nnlta9yr/rcsb-utils-chemref/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-nnlta9yr/rcsb-utils-chemref/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-e908h12q
2020-09-19T13:48:05,408   running bdist_wheel
2020-09-19T13:48:05,424   running build
2020-09-19T13:48:05,425   running build_py
2020-09-19T13:48:05,764   creating build
2020-09-19T13:48:05,765   creating build/lib
2020-09-19T13:48:05,767   creating build/lib/rcsb
2020-09-19T13:48:05,770   copying rcsb/__init__.py -> build/lib/rcsb
2020-09-19T13:48:05,775   creating build/lib/rcsb/utils
2020-09-19T13:48:05,777   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-09-19T13:48:05,784   creating build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,787   copying rcsb/utils/chemref/PharosProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,794   copying rcsb/utils/chemref/DrugBankReader.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,801   copying rcsb/utils/chemref/DrugBankProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,809   copying rcsb/utils/chemref/ChemCompProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,816   copying rcsb/utils/chemref/PubChemProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,823   copying rcsb/utils/chemref/ResidReader.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,829   copying rcsb/utils/chemref/ChemCompModelProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,836   copying rcsb/utils/chemref/PubChemUtils.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,848   copying rcsb/utils/chemref/ResidProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,855   copying rcsb/utils/chemref/PsiModProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,862   copying rcsb/utils/chemref/AtcProvider.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,869   copying rcsb/utils/chemref/__init__.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,875   copying rcsb/utils/chemref/PharosReadSqlDump.py -> build/lib/rcsb/utils/chemref
2020-09-19T13:48:05,905   installing to build/bdist.linux-armv7l/wheel
2020-09-19T13:48:05,906   running install
2020-09-19T13:48:05,908   running install_lib
2020-09-19T13:48:05,917   creating build/bdist.linux-armv7l
2020-09-19T13:48:05,917   creating build/bdist.linux-armv7l/wheel
2020-09-19T13:48:05,922   creating build/bdist.linux-armv7l/wheel/rcsb
2020-09-19T13:48:05,925   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-09-19T13:48:05,930   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,933   copying build/lib/rcsb/utils/chemref/PharosProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,941   copying build/lib/rcsb/utils/chemref/DrugBankReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,948   copying build/lib/rcsb/utils/chemref/DrugBankProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,955   copying build/lib/rcsb/utils/chemref/ChemCompProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,962   copying build/lib/rcsb/utils/chemref/PubChemProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,969   copying build/lib/rcsb/utils/chemref/ResidReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,975   copying build/lib/rcsb/utils/chemref/ChemCompModelProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,982   copying build/lib/rcsb/utils/chemref/PubChemUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:05,994   copying build/lib/rcsb/utils/chemref/ResidProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:06,001   copying build/lib/rcsb/utils/chemref/PsiModProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:06,032   copying build/lib/rcsb/utils/chemref/AtcProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:06,040   copying build/lib/rcsb/utils/chemref/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:06,045   copying build/lib/rcsb/utils/chemref/PharosReadSqlDump.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-09-19T13:48:06,051   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-09-19T13:48:06,057   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-09-19T13:48:06,062   running install_egg_info
2020-09-19T13:48:06,112   running egg_info
2020-09-19T13:48:06,114   writing entry points to rcsb.utils.chemref.egg-info/entry_points.txt
2020-09-19T13:48:06,116   writing dependency_links to rcsb.utils.chemref.egg-info/dependency_links.txt
2020-09-19T13:48:06,120   writing top-level names to rcsb.utils.chemref.egg-info/top_level.txt
2020-09-19T13:48:06,122   writing requirements to rcsb.utils.chemref.egg-info/requires.txt
2020-09-19T13:48:06,125   writing rcsb.utils.chemref.egg-info/PKG-INFO
2020-09-19T13:48:06,139   reading manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-09-19T13:48:06,143   reading manifest template 'MANIFEST.in'
2020-09-19T13:48:06,152   writing manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-09-19T13:48:06,155   Copying rcsb.utils.chemref.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.56-py3.5.egg-info
2020-09-19T13:48:06,193   running install_scripts
2020-09-19T13:48:06,400   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.56.dist-info/WHEEL
2020-09-19T13:48:06,687   Building wheel for rcsb-utils-chemref (setup.py): finished with status 'done'
2020-09-19T13:48:06,692   Created wheel for rcsb-utils-chemref: filename=rcsb.utils.chemref-0.56-py2.py3-none-any.whl size=36041 sha256=c5ba0d5655af96bfaecacd80f639bba0f88d7fa7d120176409ccf63fb57089b2
2020-09-19T13:48:06,693   Stored in directory: /tmp/pip-ephem-wheel-cache-q0l2vttf/wheels/d2/04/50/f1099c114b87cc50ae6cc6e1899c83db4e5b34dec14549d866
2020-09-19T13:48:06,697 Successfully built rcsb-utils-chemref
2020-09-19T13:48:06,710 Removed build tracker: '/tmp/pip-req-tracker-2hktacnk'