2020-09-19T23:38:37,822 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-19T23:38:38,514 Created temporary directory: /tmp/pip-ephem-wheel-cache-7h6n_28s
2020-09-19T23:38:38,518 Created temporary directory: /tmp/pip-req-tracker-v8lonxay
2020-09-19T23:38:38,519 Initialized build tracking at /tmp/pip-req-tracker-v8lonxay
2020-09-19T23:38:38,519 Created build tracker: /tmp/pip-req-tracker-v8lonxay
2020-09-19T23:38:38,519 Entered build tracker: /tmp/pip-req-tracker-v8lonxay
2020-09-19T23:38:38,520 Created temporary directory: /tmp/pip-wheel-n0bi4xgm
2020-09-19T23:38:38,535 1 location(s) to search for versions of pybedtools:
2020-09-19T23:38:38,535 * https://pypi.org/simple/pybedtools/
2020-09-19T23:38:38,536 Fetching project page and analyzing links: https://pypi.org/simple/pybedtools/
2020-09-19T23:38:38,537 Getting page https://pypi.org/simple/pybedtools/
2020-09-19T23:38:38,541 Found index url https://pypi.org/simple
2020-09-19T23:38:38,854   Found link https://files.pythonhosted.org/packages/00/d9/aca9636b3e5b29f232fd6f60859f07f3420ec3c0712b50cb25c734a02a1f/pybedtools-0.2.2dev.tar.gz#sha256=6ab084ce36f26c6086680ef25693873f9534ddb3aefec3aedbc8221e5f6f4fb6 (from https://pypi.org/simple/pybedtools/), version: 0.2.2dev
2020-09-19T23:38:38,856   Found link https://files.pythonhosted.org/packages/44/19/a9bebb9eccd8d64d58202d5b3a151de81ffc7703a47503161b7615554703/pybedtools-0.5dev.tar.gz#sha256=4e55a927a22979473c1414b43154cd3e5a51380b1895bc555a85ee4bf385ba25 (from https://pypi.org/simple/pybedtools/), version: 0.5dev
2020-09-19T23:38:38,856   Found link https://files.pythonhosted.org/packages/e4/2f/e842c6b1165d706ebc62c931c11d4dfffe60e6b045ecf80eef7ea78d7afc/pybedtools-0.5rc1.tar.gz#sha256=78ccf10923b00ec14cf337b3b9624e39fdd383ba29048f3cc03e3aabc52edb40 (from https://pypi.org/simple/pybedtools/), version: 0.5rc1
2020-09-19T23:38:38,857   Found link https://files.pythonhosted.org/packages/85/17/c89028c00537638629ca21be7f1b84e963fc8b63c1e9a5fda9884f86fb90/pybedtools-0.5.tar.gz#sha256=16e46c664e47cd36d926de202d9ac99cf7e8c970e6e008603ccb6a23139a257a (from https://pypi.org/simple/pybedtools/), version: 0.5
2020-09-19T23:38:38,858   Found link https://files.pythonhosted.org/packages/e7/9b/f082d2db470a0c9ba777a0d661fd5a7292c367840880040940de4a705e1f/pybedtools-0.5.5.tar.gz#sha256=4bc9cdadb12fae47c1a2e423f467cfd92dc282a52f2ac5d21c35611ef59c698d (from https://pypi.org/simple/pybedtools/), version: 0.5.5
2020-09-19T23:38:38,859   Found link https://files.pythonhosted.org/packages/3c/e7/365015ec8104195329635cb75ef745bff45d905271cd165f5048efaf48e3/pybedtools-0.6rc1.tar.gz#sha256=006e637d2a2e6f98f7b178211adc69fabf3cf37e168c730dbfe9e2fa810f8f8d (from https://pypi.org/simple/pybedtools/), version: 0.6rc1
2020-09-19T23:38:38,859   Found link https://files.pythonhosted.org/packages/04/ce/0e1480725fe80eb9a401f59e1bcc28fce721f6c2c5d7be233894d0154551/pybedtools-0.6.tar.gz#sha256=416406bbf059372e3214c68688447cbb9cd4e45b6a58b1615be4ff932975ede6 (from https://pypi.org/simple/pybedtools/), version: 0.6
2020-09-19T23:38:38,860   Found link https://files.pythonhosted.org/packages/ac/25/c971ba83c6df08cbd17626339ec637df57a0aa409ba3042408ff349dd710/pybedtools-0.6.1.tar.gz#sha256=da3f1ec9e6d23cba6627adb124a27d291f72b855006a277d91c1b366bfccdb22 (from https://pypi.org/simple/pybedtools/), version: 0.6.1
2020-09-19T23:38:38,861   Found link https://files.pythonhosted.org/packages/3e/71/cb09c7b874a87803f9fb9a9b679d02a82879b9cadca4c93756e05e65a439/pybedtools-0.6.2.tar.gz#sha256=7263d2a32a4805e0b0c25be32f38a17de760557c2d83234e46364ecd2debec14 (from https://pypi.org/simple/pybedtools/), version: 0.6.2
2020-09-19T23:38:38,862   Found link https://files.pythonhosted.org/packages/28/0b/15291a1aac0a2a1eb814a0c883ccebf2eebaebbef9923bfa0444df0cb3a8/pybedtools-0.6.3.tar.gz#sha256=bd7ad8584d6d19eef175a0f9b9ff00db903db532ae4c3e8bad614246974daff0 (from https://pypi.org/simple/pybedtools/), version: 0.6.3
2020-09-19T23:38:38,862   Found link https://files.pythonhosted.org/packages/7a/12/73027be04fc57dd3340e2120f0148c0aca569b16e62333f32a40b2b06ee0/pybedtools-0.6.4.tar.gz#sha256=98cd0e8bc278e8d3bf584cde5eea43f23251c91bbd70407172db206d2f3f751f (from https://pypi.org/simple/pybedtools/), version: 0.6.4
2020-09-19T23:38:38,863   Found link https://files.pythonhosted.org/packages/a4/98/dab963ff44ddd40849a01b145b6d769158d9794b979fdbfd173728e06e5b/pybedtools-0.6.5.tar.gz#sha256=0ee69c4670bae332f6de600af5edb4ed45e8dcaf3988e7eb78ab53a1889a8d9c (from https://pypi.org/simple/pybedtools/), version: 0.6.5
2020-09-19T23:38:38,864   Found link https://files.pythonhosted.org/packages/a3/91/02e900caea18ee909665440727222a9f37c9a532170c52684123f07d6e21/pybedtools-0.6.6.tar.gz#sha256=b7d2436c2f29b92cf7c2a4552a6a13adc73b2026d7a25c4aaae6797589698c68 (from https://pypi.org/simple/pybedtools/), version: 0.6.6
2020-09-19T23:38:38,865   Found link https://files.pythonhosted.org/packages/af/ff/7d488b19b8e4109bbaf7b7e4c5dc53207f2c4354d7729cf73f17a79fa104/pybedtools-0.6.7.tar.gz#sha256=b31853473db3a755bbe668b5fc209f0cd9ed876f15e192c244e348f4a7cb1cfb (from https://pypi.org/simple/pybedtools/), version: 0.6.7
2020-09-19T23:38:38,865   Found link https://files.pythonhosted.org/packages/aa/e9/c92a7e58326bf76534af1fbd4074def6999130b1838b4dcc51e9f3ba5e17/pybedtools-0.6.8.tar.gz#sha256=a278a1b5ae230eb9c1b57c4da45dad5646aead899e927ad4d9f38df3f90841db (from https://pypi.org/simple/pybedtools/), version: 0.6.8
2020-09-19T23:38:38,866   Found link https://files.pythonhosted.org/packages/79/20/2a0861cc9ffc41043efd814cdf860828f4b2213573c82ea6138eb6cb221b/pybedtools-0.6.9.tar.gz#sha256=56915b3e2200c6fb56260a36f839e66ce27d7dd3ef55fba278c3931b786fbfd1 (from https://pypi.org/simple/pybedtools/), version: 0.6.9
2020-09-19T23:38:38,867   Found link https://files.pythonhosted.org/packages/e6/8d/06beb4e8a9e9a4ce042af337a5b855a789da586072d0c418ed9cb9398628/pybedtools-0.7.0.tar.gz#sha256=a0b3bd7c32786067a767585ab17ab9e04bf7e227f275ff3883fab9c1d8e458ba (from https://pypi.org/simple/pybedtools/), version: 0.7.0
2020-09-19T23:38:38,868   Found link https://files.pythonhosted.org/packages/b5/1c/1b7e66668105e5b84cc6224a54ce552c6a6113e9b34c980fc436140e6be1/pybedtools-0.7.1.tar.gz#sha256=d889e8e1f75803b13f0f774320ca3e38eea88e7998866a1c90e9ba51caa855be (from https://pypi.org/simple/pybedtools/), version: 0.7.1
2020-09-19T23:38:38,868   Found link https://files.pythonhosted.org/packages/a2/43/d80dbf32da421c78ea84a386402e1840dd06f3aba7e5fe73e8134e1ce50a/pybedtools-0.7.4.tar.gz#sha256=15cfae9e8a207ded403ad9fa2e77f09d14c2fe377d1bc5f8b063647e2d0554e0 (from https://pypi.org/simple/pybedtools/), version: 0.7.4
2020-09-19T23:38:38,869   Found link https://files.pythonhosted.org/packages/ed/f1/2caa4dc57b62707f0df147c0820d1fc8565e439c5f5c86778df7a2fec59f/pybedtools-0.7.5.tar.gz#sha256=f2428b4845083eff36385bec241ddddf7488a7de3f18886a78c73226e9e3306c (from https://pypi.org/simple/pybedtools/), version: 0.7.5
2020-09-19T23:38:38,870   Found link https://files.pythonhosted.org/packages/f4/49/ce7ccc0ad79189eb8b8eec170c350643e7a209f98e34dae239a954d6fdb0/pybedtools-0.7.6.tar.gz#sha256=8b6382036c715b49f83e35cc787d7084c1633ebe94a2a3c4102e805613f7426b (from https://pypi.org/simple/pybedtools/), version: 0.7.6
2020-09-19T23:38:38,871   Found link https://files.pythonhosted.org/packages/c2/a6/29fd41e86b38e7ca39eb7818c422e927534f2bd324c34cfd411cfca203b0/pybedtools-0.7.7.tar.gz#sha256=dba8758bd86121e4dcfc8b25ebae7d3b2de6ff9e38e4cdd9dc03f128bf5d4c9d (from https://pypi.org/simple/pybedtools/), version: 0.7.7
2020-09-19T23:38:38,872   Found link https://files.pythonhosted.org/packages/2d/ee/aa19e50e03e06c817d00eadf8b56824b9e473da8c3e8ca3b33a11717ee6f/pybedtools-0.7.8.tar.gz#sha256=e80e8b73b233ec6950069e0e1cf14127aff8310a8eaf3ee663bdfbcb61309fdc (from https://pypi.org/simple/pybedtools/), version: 0.7.8
2020-09-19T23:38:38,872   Found link https://files.pythonhosted.org/packages/7c/66/8aecffd830eddbd05c1c3e737f87220cef9f2a8358f1d692f85b30269520/pybedtools-0.7.9.tar.gz#sha256=e9134d7dc3de41b90126df633fe3aa854a0427d7ada834dc8681081e8b2fea14 (from https://pypi.org/simple/pybedtools/), version: 0.7.9
2020-09-19T23:38:38,873   Found link https://files.pythonhosted.org/packages/09/57/e7668e8644c60413be05b8cc9c23aaea3a0717b4025843d8c26b7c4822af/pybedtools-0.7.10.tar.gz#sha256=518a2311bd33f29cf2ee8fc1a028dda8c8e380c9fc83fcb0fbaa206933174b50 (from https://pypi.org/simple/pybedtools/), version: 0.7.10
2020-09-19T23:38:38,874   Found link https://files.pythonhosted.org/packages/ca/b6/af143d5247cfe331e32c96ca92056293140eb8ce788d37842f6dcea734b4/pybedtools-0.8.0.tar.gz#sha256=4eebd2cd1764ee1c604fd881703c3e329195485350b987b7fb8db42d232984f6 (from https://pypi.org/simple/pybedtools/), version: 0.8.0
2020-09-19T23:38:38,875   Found link https://files.pythonhosted.org/packages/bf/14/152220f39cda6b9b72810eeed103c6ec78422429adabe3aafc3eaf6feb40/pybedtools-0.8.1.tar.gz#sha256=c035e078617f94720eb627e20c91f2377a7bd9158a137872a6ac88f800898593 (from https://pypi.org/simple/pybedtools/), version: 0.8.1
2020-09-19T23:38:38,893 Given no hashes to check 1 links for project 'pybedtools': discarding no candidates
2020-09-19T23:38:38,896 Using version 0.2.2.dev0 (newest of versions: 0.2.2.dev0)
2020-09-19T23:38:38,903 Collecting pybedtools==0.2.2dev
2020-09-19T23:38:38,907   Created temporary directory: /tmp/pip-unpack-jj456dv0
2020-09-19T23:38:39,121   Downloading pybedtools-0.2.2dev.tar.gz (11 kB)
2020-09-19T23:38:39,228   Added pybedtools==0.2.2dev from https://files.pythonhosted.org/packages/00/d9/aca9636b3e5b29f232fd6f60859f07f3420ec3c0712b50cb25c734a02a1f/pybedtools-0.2.2dev.tar.gz#sha256=6ab084ce36f26c6086680ef25693873f9534ddb3aefec3aedbc8221e5f6f4fb6 to build tracker '/tmp/pip-req-tracker-v8lonxay'
2020-09-19T23:38:39,229     Running setup.py (path:/tmp/pip-wheel-n0bi4xgm/pybedtools/setup.py) egg_info for package pybedtools
2020-09-19T23:38:39,231     Created temporary directory: /tmp/pip-pip-egg-info-n3h59102
2020-09-19T23:38:39,231     Running command python setup.py egg_info
2020-09-19T23:38:41,026     running egg_info
2020-09-19T23:38:41,031     creating /tmp/pip-pip-egg-info-n3h59102/pybedtools.egg-info
2020-09-19T23:38:41,033     writing /tmp/pip-pip-egg-info-n3h59102/pybedtools.egg-info/PKG-INFO
2020-09-19T23:38:41,037     writing top-level names to /tmp/pip-pip-egg-info-n3h59102/pybedtools.egg-info/top_level.txt
2020-09-19T23:38:41,040     writing dependency_links to /tmp/pip-pip-egg-info-n3h59102/pybedtools.egg-info/dependency_links.txt
2020-09-19T23:38:41,043     writing manifest file '/tmp/pip-pip-egg-info-n3h59102/pybedtools.egg-info/SOURCES.txt'
2020-09-19T23:38:41,345     reading manifest file '/tmp/pip-pip-egg-info-n3h59102/pybedtools.egg-info/SOURCES.txt'
2020-09-19T23:38:41,351     writing manifest file '/tmp/pip-pip-egg-info-n3h59102/pybedtools.egg-info/SOURCES.txt'
2020-09-19T23:38:41,353     /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:458: UserWarning: Normalizing '0.2.2dev' to '0.2.2.dev0'
2020-09-19T23:38:41,354       warnings.warn(tmpl.format(**locals()))
2020-09-19T23:38:41,478   Source in /tmp/pip-wheel-n0bi4xgm/pybedtools has version 0.2.2.dev0, which satisfies requirement pybedtools==0.2.2dev from https://files.pythonhosted.org/packages/00/d9/aca9636b3e5b29f232fd6f60859f07f3420ec3c0712b50cb25c734a02a1f/pybedtools-0.2.2dev.tar.gz#sha256=6ab084ce36f26c6086680ef25693873f9534ddb3aefec3aedbc8221e5f6f4fb6
2020-09-19T23:38:41,480   Removed pybedtools==0.2.2dev from https://files.pythonhosted.org/packages/00/d9/aca9636b3e5b29f232fd6f60859f07f3420ec3c0712b50cb25c734a02a1f/pybedtools-0.2.2dev.tar.gz#sha256=6ab084ce36f26c6086680ef25693873f9534ddb3aefec3aedbc8221e5f6f4fb6 from build tracker '/tmp/pip-req-tracker-v8lonxay'
2020-09-19T23:38:41,483 Building wheels for collected packages: pybedtools
2020-09-19T23:38:41,491   Created temporary directory: /tmp/pip-wheel-3y6q3rdu
2020-09-19T23:38:41,493   Building wheel for pybedtools (setup.py): started
2020-09-19T23:38:41,495   Destination directory: /tmp/pip-wheel-3y6q3rdu
2020-09-19T23:38:41,496   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-n0bi4xgm/pybedtools/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-n0bi4xgm/pybedtools/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3y6q3rdu
2020-09-19T23:38:43,216   /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:458: UserWarning: Normalizing '0.2.2dev' to '0.2.2.dev0'
2020-09-19T23:38:43,217     warnings.warn(tmpl.format(**locals()))
2020-09-19T23:38:43,288   running bdist_wheel
2020-09-19T23:38:43,301   running build
2020-09-19T23:38:43,302   running build_py
2020-09-19T23:38:43,627   creating build
2020-09-19T23:38:43,628   creating build/lib
2020-09-19T23:38:43,629   creating build/lib/pybedtools
2020-09-19T23:38:43,631   copying pybedtools/bedtool.py -> build/lib/pybedtools
2020-09-19T23:38:43,636   copying pybedtools/genome_registry.py -> build/lib/pybedtools
2020-09-19T23:38:43,639   copying pybedtools/__init__.py -> build/lib/pybedtools
2020-09-19T23:38:43,642   copying pybedtools/features.py -> build/lib/pybedtools
2020-09-19T23:38:43,646   creating build/lib/pybedtools/test
2020-09-19T23:38:43,648   copying pybedtools/test/__init__.py -> build/lib/pybedtools/test
2020-09-19T23:38:43,650   copying pybedtools/test/test1.py -> build/lib/pybedtools/test
2020-09-19T23:38:43,660   installing to build/bdist.linux-armv7l/wheel
2020-09-19T23:38:43,661   running install
2020-09-19T23:38:43,662   running install_lib
2020-09-19T23:38:43,668   creating build/bdist.linux-armv7l
2020-09-19T23:38:43,669   creating build/bdist.linux-armv7l/wheel
2020-09-19T23:38:43,672   creating build/bdist.linux-armv7l/wheel/pybedtools
2020-09-19T23:38:43,674   creating build/bdist.linux-armv7l/wheel/pybedtools/test
2020-09-19T23:38:43,676   copying build/lib/pybedtools/test/__init__.py -> build/bdist.linux-armv7l/wheel/pybedtools/test
2020-09-19T23:38:43,679   copying build/lib/pybedtools/test/test1.py -> build/bdist.linux-armv7l/wheel/pybedtools/test
2020-09-19T23:38:43,682   copying build/lib/pybedtools/bedtool.py -> build/bdist.linux-armv7l/wheel/pybedtools
2020-09-19T23:38:43,687   copying build/lib/pybedtools/genome_registry.py -> build/bdist.linux-armv7l/wheel/pybedtools
2020-09-19T23:38:43,691   copying build/lib/pybedtools/__init__.py -> build/bdist.linux-armv7l/wheel/pybedtools
2020-09-19T23:38:43,694   copying build/lib/pybedtools/features.py -> build/bdist.linux-armv7l/wheel/pybedtools
2020-09-19T23:38:43,697   running install_egg_info
2020-09-19T23:38:43,748   running egg_info
2020-09-19T23:38:43,749   writing pybedtools.egg-info/PKG-INFO
2020-09-19T23:38:43,752   writing dependency_links to pybedtools.egg-info/dependency_links.txt
2020-09-19T23:38:43,754   writing top-level names to pybedtools.egg-info/top_level.txt
2020-09-19T23:38:43,764   reading manifest file 'pybedtools.egg-info/SOURCES.txt'
2020-09-19T23:38:43,771   writing manifest file 'pybedtools.egg-info/SOURCES.txt'
2020-09-19T23:38:43,773   Copying pybedtools.egg-info to build/bdist.linux-armv7l/wheel/pybedtools-0.2.2.dev0-py3.5.egg-info
2020-09-19T23:38:43,787   running install_scripts
2020-09-19T23:38:43,921   creating build/bdist.linux-armv7l/wheel/pybedtools-0.2.2.dev0.dist-info/WHEEL
2020-09-19T23:38:44,114   Building wheel for pybedtools (setup.py): finished with status 'done'
2020-09-19T23:38:44,118   Created wheel for pybedtools: filename=pybedtools-0.2.2.dev0-py3-none-any.whl size=14030 sha256=37efef7ea02a872e8d60cd34e5a36bd3e480eaccf7121bd8ac67647dd4550efc
2020-09-19T23:38:44,119   Stored in directory: /tmp/pip-ephem-wheel-cache-7h6n_28s/wheels/b5/2e/49/33c73cc5cf2eab8b89c2720810191f55deabcd5dc09832d75b
2020-09-19T23:38:44,122 Successfully built pybedtools
2020-09-19T23:38:44,128 Removed build tracker: '/tmp/pip-req-tracker-v8lonxay'