2020-09-20T00:45:44,521 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-20T00:45:45,215 Created temporary directory: /tmp/pip-ephem-wheel-cache-xs8xprxh
2020-09-20T00:45:45,220 Created temporary directory: /tmp/pip-req-tracker-gd898me2
2020-09-20T00:45:45,221 Initialized build tracking at /tmp/pip-req-tracker-gd898me2
2020-09-20T00:45:45,221 Created build tracker: /tmp/pip-req-tracker-gd898me2
2020-09-20T00:45:45,222 Entered build tracker: /tmp/pip-req-tracker-gd898me2
2020-09-20T00:45:45,223 Created temporary directory: /tmp/pip-wheel-4h2uid_r
2020-09-20T00:45:45,240 1 location(s) to search for versions of capsid:
2020-09-20T00:45:45,240 * https://pypi.org/simple/capsid/
2020-09-20T00:45:45,241 Fetching project page and analyzing links: https://pypi.org/simple/capsid/
2020-09-20T00:45:45,243 Getting page https://pypi.org/simple/capsid/
2020-09-20T00:45:45,247 Found index url https://pypi.org/simple
2020-09-20T00:45:45,489   Found link https://files.pythonhosted.org/packages/c9/3b/0be7962026f01fb5c5dcc48c4c354c04f6c0d9b119f01b872a7cd8a895e6/capsid-1.0.tar.gz#sha256=e57612e054594b6bed0dc3f12280db1fce856481f87a0750db9ffe1ef2e81c32 (from https://pypi.org/simple/capsid/), version: 1.0
2020-09-20T00:45:45,490   Found link https://files.pythonhosted.org/packages/3a/17/454ae5b540194b2aba04ccd7ced0c08b421a79fc9876f73f28e283d8e6fb/capsid-1.0.1.tar.gz#sha256=bbbb85d4a56f2cba03291593c44ab03eb448b07ef154e90065d0d79db8d7e86b (from https://pypi.org/simple/capsid/), version: 1.0.1
2020-09-20T00:45:45,491   Found link https://files.pythonhosted.org/packages/07/a1/eb8e75d4ac7767b2da8f15ca40d3644ead52f5d6c016a31fb01cc91665fb/capsid-1.1.tar.gz#sha256=3351bd15328c925428aa21eb6697eb9e2b11fdfdf5821c83bef2962ed72e8e23 (from https://pypi.org/simple/capsid/), version: 1.1
2020-09-20T00:45:45,492   Found link https://files.pythonhosted.org/packages/e1/f3/0e97efb532f53c7c11af0469f3451f2444b256a95ffccebecc3e061ecdd7/capsid-1.2.tar.gz#sha256=88e0cbaeda4b04f853aa8fcd2679e79c5d77ad02200ed1cc1199d6651cd55ded (from https://pypi.org/simple/capsid/), version: 1.2
2020-09-20T00:45:45,493   Found link https://files.pythonhosted.org/packages/e7/09/a8641bb96e1c41155707cc932d95a616903def5e006b17c7532ff4202eb3/capsid-1.2.6.tar.gz#sha256=717c1ed419fa1652db2703f644260ea83d0ba1f4162ae883221b9900e338a1c4 (from https://pypi.org/simple/capsid/), version: 1.2.6
2020-09-20T00:45:45,494   Found link https://files.pythonhosted.org/packages/73/c5/37595f97e61ea80ac377a0504ded73c023798fe31e04bc15151b5b56323c/capsid-1.2.7.tar.gz#sha256=f8c29fd189cbe6205d2242297bd2b2bc6800555378f2df4365fbb5849b36202f (from https://pypi.org/simple/capsid/), version: 1.2.7
2020-09-20T00:45:45,494   Found link https://files.pythonhosted.org/packages/d2/8e/d359d343c3636eadbfe5c0037a0a0b374e2667a40e7b6a70740e6d4b668c/capsid-1.4.0.tar.gz#sha256=90f4d60a7ed5c47f3b1c06ca4382c665c11053fe17cefc30274e903669bc049d (from https://pypi.org/simple/capsid/), version: 1.4.0
2020-09-20T00:45:45,495   Found link https://files.pythonhosted.org/packages/5d/48/6c97cfcf0870c27e3d0cdf53bc5092edf6b3ed1ec1c8ebb47ec06cab730e/capsid-1.4.1.tar.gz#sha256=80ff6589f4873bf78d1fba2d5f9cb97db022fc56b9828d9d471ce75998035b2d (from https://pypi.org/simple/capsid/), version: 1.4.1
2020-09-20T00:45:45,496   Found link https://files.pythonhosted.org/packages/99/9f/1d4bb2c3e14cddac905da1d71b91990df0f4f4412bc7e0ac420a515531ec/capsid-1.4.2.tar.gz#sha256=5083ecec270eb16b687fc31d573f7835bf6066255e5a137579cf5339634a68d4 (from https://pypi.org/simple/capsid/), version: 1.4.2
2020-09-20T00:45:45,497   Found link https://files.pythonhosted.org/packages/68/99/9f5c79262b95040fe71e548da81262a6003f6d73864106bfd195dd975cd3/capsid-1.4.3.tar.gz#sha256=5f62a05be30aded75d80ad93a95b77ca995d6798d70adc0be0fbb22b7124e78f (from https://pypi.org/simple/capsid/), version: 1.4.3
2020-09-20T00:45:45,498   Found link https://files.pythonhosted.org/packages/03/a4/59b56a05260bcbbb8a550c04b2785ef6b8d869e0e8dec9bc5d5caf45e7c2/capsid-1.6.1.tar.gz#sha256=6dc3a6dffd8b8058c3d0d3b45580895ce90683e748ed11469a97ceaebd0e158b (from https://pypi.org/simple/capsid/), version: 1.6.1
2020-09-20T00:45:45,498   Found link https://files.pythonhosted.org/packages/bb/bc/94b0662d93cd6b1f9976e9c23530995731d14955c4c2c129a9a66e204850/capsid-1.6.2.tar.gz#sha256=33cfdf54ea737ad41c8902c2f6ccb0f9ac182a29414279236ae9cd45235fb41e (from https://pypi.org/simple/capsid/), version: 1.6.2
2020-09-20T00:45:45,512 Given no hashes to check 1 links for project 'capsid': discarding no candidates
2020-09-20T00:45:45,514 Using version 1.1 (newest of versions: 1.1)
2020-09-20T00:45:45,523 Collecting capsid==1.1
2020-09-20T00:45:45,528   Created temporary directory: /tmp/pip-unpack-dg_i67p2
2020-09-20T00:45:45,752   Downloading capsid-1.1.tar.gz (15 kB)
2020-09-20T00:45:45,897   Added capsid==1.1 from https://files.pythonhosted.org/packages/07/a1/eb8e75d4ac7767b2da8f15ca40d3644ead52f5d6c016a31fb01cc91665fb/capsid-1.1.tar.gz#sha256=3351bd15328c925428aa21eb6697eb9e2b11fdfdf5821c83bef2962ed72e8e23 to build tracker '/tmp/pip-req-tracker-gd898me2'
2020-09-20T00:45:45,900     Running setup.py (path:/tmp/pip-wheel-4h2uid_r/capsid/setup.py) egg_info for package capsid
2020-09-20T00:45:45,903     Created temporary directory: /tmp/pip-pip-egg-info-zdjed34o
2020-09-20T00:45:45,904     Running command python setup.py egg_info
2020-09-20T00:45:48,241     running egg_info
2020-09-20T00:45:48,248     creating /tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info
2020-09-20T00:45:48,253     writing top-level names to /tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info/top_level.txt
2020-09-20T00:45:48,255     writing /tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info/PKG-INFO
2020-09-20T00:45:48,260     writing requirements to /tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info/requires.txt
2020-09-20T00:45:48,263     writing dependency_links to /tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info/dependency_links.txt
2020-09-20T00:45:48,267     writing manifest file '/tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info/SOURCES.txt'
2020-09-20T00:45:48,657     reading manifest file '/tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info/SOURCES.txt'
2020-09-20T00:45:48,660     reading manifest template 'MANIFEST.in'
2020-09-20T00:45:48,667     writing manifest file '/tmp/pip-pip-egg-info-zdjed34o/capsid.egg-info/SOURCES.txt'
2020-09-20T00:45:48,809   Source in /tmp/pip-wheel-4h2uid_r/capsid has version 1.1, which satisfies requirement capsid==1.1 from https://files.pythonhosted.org/packages/07/a1/eb8e75d4ac7767b2da8f15ca40d3644ead52f5d6c016a31fb01cc91665fb/capsid-1.1.tar.gz#sha256=3351bd15328c925428aa21eb6697eb9e2b11fdfdf5821c83bef2962ed72e8e23
2020-09-20T00:45:48,811   Removed capsid==1.1 from https://files.pythonhosted.org/packages/07/a1/eb8e75d4ac7767b2da8f15ca40d3644ead52f5d6c016a31fb01cc91665fb/capsid-1.1.tar.gz#sha256=3351bd15328c925428aa21eb6697eb9e2b11fdfdf5821c83bef2962ed72e8e23 from build tracker '/tmp/pip-req-tracker-gd898me2'
2020-09-20T00:45:48,815 Building wheels for collected packages: capsid
2020-09-20T00:45:48,824   Created temporary directory: /tmp/pip-wheel-k2vtiu7z
2020-09-20T00:45:48,825   Building wheel for capsid (setup.py): started
2020-09-20T00:45:48,826   Destination directory: /tmp/pip-wheel-k2vtiu7z
2020-09-20T00:45:48,826   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-4h2uid_r/capsid/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-4h2uid_r/capsid/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-k2vtiu7z
2020-09-20T00:45:51,175   running bdist_wheel
2020-09-20T00:45:51,190   running build
2020-09-20T00:45:51,191   running build_py
2020-09-20T00:45:51,532   creating build
2020-09-20T00:45:51,533   creating build/lib
2020-09-20T00:45:51,534   creating build/lib/capsid
2020-09-20T00:45:51,537   copying capsid/sam2bam.py -> build/lib/capsid
2020-09-20T00:45:51,541   copying capsid/colorize.py -> build/lib/capsid
2020-09-20T00:45:51,546   copying capsid/statistics.py -> build/lib/capsid
2020-09-20T00:45:51,551   copying capsid/subtraction.py -> build/lib/capsid
2020-09-20T00:45:51,557   copying capsid/fasta.py -> build/lib/capsid
2020-09-20T00:45:51,563   copying capsid/__init__.py -> build/lib/capsid
2020-09-20T00:45:51,568   copying capsid/gbloader.py -> build/lib/capsid
2020-09-20T00:45:51,575   copying capsid/configure.py -> build/lib/capsid
2020-09-20T00:45:51,580   running build_scripts
2020-09-20T00:45:51,581   creating build/scripts-3.5
2020-09-20T00:45:51,584   copying and adjusting bin/capsid -> build/scripts-3.5
2020-09-20T00:45:51,588   changing mode of build/scripts-3.5/capsid from 644 to 755
2020-09-20T00:45:51,595   installing to build/bdist.linux-armv7l/wheel
2020-09-20T00:45:51,595   running install
2020-09-20T00:45:51,597   running install_lib
2020-09-20T00:45:51,604   creating build/bdist.linux-armv7l
2020-09-20T00:45:51,605   creating build/bdist.linux-armv7l/wheel
2020-09-20T00:45:51,609   creating build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,611   copying build/lib/capsid/sam2bam.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,616   copying build/lib/capsid/colorize.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,621   copying build/lib/capsid/statistics.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,626   copying build/lib/capsid/subtraction.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,631   copying build/lib/capsid/fasta.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,636   copying build/lib/capsid/__init__.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,641   copying build/lib/capsid/gbloader.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,648   copying build/lib/capsid/configure.py -> build/bdist.linux-armv7l/wheel/capsid
2020-09-20T00:45:51,653   running install_egg_info
2020-09-20T00:45:51,729   running egg_info
2020-09-20T00:45:51,731   writing dependency_links to capsid.egg-info/dependency_links.txt
2020-09-20T00:45:51,735   writing requirements to capsid.egg-info/requires.txt
2020-09-20T00:45:51,739   writing capsid.egg-info/PKG-INFO
2020-09-20T00:45:51,744   writing top-level names to capsid.egg-info/top_level.txt
2020-09-20T00:45:51,755   reading manifest file 'capsid.egg-info/SOURCES.txt'
2020-09-20T00:45:51,759   reading manifest template 'MANIFEST.in'
2020-09-20T00:45:51,766   writing manifest file 'capsid.egg-info/SOURCES.txt'
2020-09-20T00:45:51,769   Copying capsid.egg-info to build/bdist.linux-armv7l/wheel/capsid-1.1-py3.5.egg-info
2020-09-20T00:45:51,803   running install_scripts
2020-09-20T00:45:51,931   creating build/bdist.linux-armv7l/wheel/capsid-1.1.data
2020-09-20T00:45:51,932   creating build/bdist.linux-armv7l/wheel/capsid-1.1.data/scripts
2020-09-20T00:45:51,935   copying build/scripts-3.5/capsid -> build/bdist.linux-armv7l/wheel/capsid-1.1.data/scripts
2020-09-20T00:45:51,940   changing mode of build/bdist.linux-armv7l/wheel/capsid-1.1.data/scripts/capsid to 755
2020-09-20T00:45:52,007   creating build/bdist.linux-armv7l/wheel/capsid-1.1.dist-info/WHEEL
2020-09-20T00:45:52,268   Building wheel for capsid (setup.py): finished with status 'done'
2020-09-20T00:45:52,273   Created wheel for capsid: filename=capsid-1.1-py3-none-any.whl size=22209 sha256=d1077442d64a1f7a6f85668a72d4fc49673007c078cccad49a33a52594a1bc54
2020-09-20T00:45:52,273   Stored in directory: /tmp/pip-ephem-wheel-cache-xs8xprxh/wheels/79/8e/25/2a31dc147e11dad20045d1f040b676e5c442c05d5d06960571
2020-09-20T00:45:52,277 Successfully built capsid
2020-09-20T00:45:52,288 Removed build tracker: '/tmp/pip-req-tracker-gd898me2'