2020-09-20T04:15:15,030 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-20T04:15:15,680 Created temporary directory: /tmp/pip-ephem-wheel-cache-yrsbnhiu
2020-09-20T04:15:15,685 Created temporary directory: /tmp/pip-req-tracker-xon8obvu
2020-09-20T04:15:15,686 Initialized build tracking at /tmp/pip-req-tracker-xon8obvu
2020-09-20T04:15:15,687 Created build tracker: /tmp/pip-req-tracker-xon8obvu
2020-09-20T04:15:15,687 Entered build tracker: /tmp/pip-req-tracker-xon8obvu
2020-09-20T04:15:15,688 Created temporary directory: /tmp/pip-wheel-mu04tuaf
2020-09-20T04:15:15,707 1 location(s) to search for versions of pancake:
2020-09-20T04:15:15,707 * https://pypi.org/simple/pancake/
2020-09-20T04:15:15,708 Fetching project page and analyzing links: https://pypi.org/simple/pancake/
2020-09-20T04:15:15,710 Getting page https://pypi.org/simple/pancake/
2020-09-20T04:15:15,715 Found index url https://pypi.org/simple
2020-09-20T04:15:16,062   Found link https://files.pythonhosted.org/packages/72/50/ff3f8d0718873ca001c3948ca909ca2060c80a66760d6c822e96955caa5c/pancake-1.0.tar.gz#sha256=af12833f795d782db41a47e8aa5a3b70aa2c140143f7414d54b6f2ef6dded784 (from https://pypi.org/simple/pancake/), version: 1.0
2020-09-20T04:15:16,063   Found link https://files.pythonhosted.org/packages/22/49/eacfa7d1d885b02dd42d7a5ed438d06539e07119ca5403934c5867adeefb/pancake-1.1.tar.gz#sha256=e1f545c80a994e46c3cecfb5d3cb783db2039465b901074f44c5accfc33d042b (from https://pypi.org/simple/pancake/), version: 1.1
2020-09-20T04:15:16,064   Found link https://files.pythonhosted.org/packages/10/79/fab3e542d415b007bfc1a1c0db4a3d99423608dac9b7573a43029549f17f/pancake-1.1.1.tar.gz#sha256=4352d5716fb3e5fba581857d7f82129c944c5f1326c445028a91df5094dc9ba9 (from https://pypi.org/simple/pancake/), version: 1.1.1
2020-09-20T04:15:16,065   Found link https://files.pythonhosted.org/packages/c6/ac/1cadba4bf3d0cb647da3d04df10ce8c4b085b50f08efd50117531fdb743c/pancake-1.1.2.tar.gz#sha256=717c29a1d006ca9b0e37b73a171768781107bfc26d8050d4867571be1d844358 (from https://pypi.org/simple/pancake/), version: 1.1.2
2020-09-20T04:15:16,076 Given no hashes to check 1 links for project 'pancake': discarding no candidates
2020-09-20T04:15:16,077 Using version 1.1 (newest of versions: 1.1)
2020-09-20T04:15:16,085 Collecting pancake==1.1
2020-09-20T04:15:16,090   Created temporary directory: /tmp/pip-unpack-yrsj84bz
2020-09-20T04:15:16,181   Downloading pancake-1.1.tar.gz (85 kB)
2020-09-20T04:15:16,404   Added pancake==1.1 from https://files.pythonhosted.org/packages/22/49/eacfa7d1d885b02dd42d7a5ed438d06539e07119ca5403934c5867adeefb/pancake-1.1.tar.gz#sha256=e1f545c80a994e46c3cecfb5d3cb783db2039465b901074f44c5accfc33d042b to build tracker '/tmp/pip-req-tracker-xon8obvu'
2020-09-20T04:15:16,407     Running setup.py (path:/tmp/pip-wheel-mu04tuaf/pancake/setup.py) egg_info for package pancake
2020-09-20T04:15:16,410     Created temporary directory: /tmp/pip-pip-egg-info-dur5y4ir
2020-09-20T04:15:16,411     Running command python setup.py egg_info
2020-09-20T04:15:18,490     running egg_info
2020-09-20T04:15:18,496     creating /tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info
2020-09-20T04:15:18,498     writing requirements to /tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info/requires.txt
2020-09-20T04:15:18,502     writing top-level names to /tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info/top_level.txt
2020-09-20T04:15:18,505     writing dependency_links to /tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info/dependency_links.txt
2020-09-20T04:15:18,508     writing /tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info/PKG-INFO
2020-09-20T04:15:18,514     writing manifest file '/tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info/SOURCES.txt'
2020-09-20T04:15:18,868     reading manifest file '/tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info/SOURCES.txt'
2020-09-20T04:15:18,871     reading manifest template 'MANIFEST.in'
2020-09-20T04:15:18,881     writing manifest file '/tmp/pip-pip-egg-info-dur5y4ir/pancake.egg-info/SOURCES.txt'
2020-09-20T04:15:19,014   Source in /tmp/pip-wheel-mu04tuaf/pancake has version 1.1, which satisfies requirement pancake==1.1 from https://files.pythonhosted.org/packages/22/49/eacfa7d1d885b02dd42d7a5ed438d06539e07119ca5403934c5867adeefb/pancake-1.1.tar.gz#sha256=e1f545c80a994e46c3cecfb5d3cb783db2039465b901074f44c5accfc33d042b
2020-09-20T04:15:19,016   Removed pancake==1.1 from https://files.pythonhosted.org/packages/22/49/eacfa7d1d885b02dd42d7a5ed438d06539e07119ca5403934c5867adeefb/pancake-1.1.tar.gz#sha256=e1f545c80a994e46c3cecfb5d3cb783db2039465b901074f44c5accfc33d042b from build tracker '/tmp/pip-req-tracker-xon8obvu'
2020-09-20T04:15:19,019 Building wheels for collected packages: pancake
2020-09-20T04:15:19,028   Created temporary directory: /tmp/pip-wheel-umf87ghw
2020-09-20T04:15:19,029   Building wheel for pancake (setup.py): started
2020-09-20T04:15:19,030   Destination directory: /tmp/pip-wheel-umf87ghw
2020-09-20T04:15:19,030   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-mu04tuaf/pancake/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-mu04tuaf/pancake/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-umf87ghw
2020-09-20T04:15:21,105   running bdist_wheel
2020-09-20T04:15:21,120   running build
2020-09-20T04:15:21,121   running build_py
2020-09-20T04:15:21,460   creating build
2020-09-20T04:15:21,461   creating build/lib
2020-09-20T04:15:21,462   creating build/lib/pancake
2020-09-20T04:15:21,465   copying pancake/singletons.py -> build/lib/pancake
2020-09-20T04:15:21,470   copying pancake/sf.py -> build/lib/pancake
2020-09-20T04:15:21,474   copying pancake/utils.py -> build/lib/pancake
2020-09-20T04:15:21,480   copying pancake/editops.py -> build/lib/pancake
2020-09-20T04:15:21,484   copying pancake/pangenome.py -> build/lib/pancake
2020-09-20T04:15:21,491   copying pancake/__init__.py -> build/lib/pancake
2020-09-20T04:15:21,499   copying pancake/gv_graphs.py -> build/lib/pancake
2020-09-20T04:15:21,506   copying pancake/alignment.py -> build/lib/pancake
2020-09-20T04:15:21,511   copying pancake/core.py -> build/lib/pancake
2020-09-20T04:15:21,518   copying pancake/setup.py -> build/lib/pancake
2020-09-20T04:15:21,524   copying pancake/chromosome.py -> build/lib/pancake
2020-09-20T04:15:21,529   copying pancake/aliparser.py -> build/lib/pancake
2020-09-20T04:15:21,536   copying pancake/fi.py -> build/lib/pancake
2020-09-20T04:15:21,545   running build_scripts
2020-09-20T04:15:21,546   creating build/scripts-3.5
2020-09-20T04:15:21,551   copying and adjusting bin/pancake -> build/scripts-3.5
2020-09-20T04:15:21,557   changing mode of build/scripts-3.5/pancake from 644 to 755
2020-09-20T04:15:21,563   installing to build/bdist.linux-armv7l/wheel
2020-09-20T04:15:21,564   running install
2020-09-20T04:15:21,566   running install_lib
2020-09-20T04:15:21,573   creating build/bdist.linux-armv7l
2020-09-20T04:15:21,573   creating build/bdist.linux-armv7l/wheel
2020-09-20T04:15:21,578   creating build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,580   copying build/lib/pancake/singletons.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,585   copying build/lib/pancake/sf.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,590   copying build/lib/pancake/utils.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,597   copying build/lib/pancake/editops.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,604   copying build/lib/pancake/pangenome.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,613   copying build/lib/pancake/__init__.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,619   copying build/lib/pancake/gv_graphs.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,624   copying build/lib/pancake/alignment.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,629   copying build/lib/pancake/core.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,635   copying build/lib/pancake/setup.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,640   copying build/lib/pancake/chromosome.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,646   copying build/lib/pancake/aliparser.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,653   copying build/lib/pancake/fi.py -> build/bdist.linux-armv7l/wheel/pancake
2020-09-20T04:15:21,657   running install_egg_info
2020-09-20T04:15:21,700   running egg_info
2020-09-20T04:15:21,701   writing requirements to pancake.egg-info/requires.txt
2020-09-20T04:15:21,704   writing top-level names to pancake.egg-info/top_level.txt
2020-09-20T04:15:21,707   writing dependency_links to pancake.egg-info/dependency_links.txt
2020-09-20T04:15:21,709   writing pancake.egg-info/PKG-INFO
2020-09-20T04:15:21,721   reading manifest file 'pancake.egg-info/SOURCES.txt'
2020-09-20T04:15:21,726   reading manifest template 'MANIFEST.in'
2020-09-20T04:15:21,736   writing manifest file 'pancake.egg-info/SOURCES.txt'
2020-09-20T04:15:21,739   Copying pancake.egg-info to build/bdist.linux-armv7l/wheel/pancake-1.1-py3.5.egg-info
2020-09-20T04:15:21,763   running install_scripts
2020-09-20T04:15:21,944   creating build/bdist.linux-armv7l/wheel/pancake-1.1.data
2020-09-20T04:15:21,944   creating build/bdist.linux-armv7l/wheel/pancake-1.1.data/scripts
2020-09-20T04:15:21,947   copying build/scripts-3.5/pancake -> build/bdist.linux-armv7l/wheel/pancake-1.1.data/scripts
2020-09-20T04:15:21,953   changing mode of build/bdist.linux-armv7l/wheel/pancake-1.1.data/scripts/pancake to 755
2020-09-20T04:15:22,001   creating build/bdist.linux-armv7l/wheel/pancake-1.1.dist-info/WHEEL
2020-09-20T04:15:22,274   Building wheel for pancake (setup.py): finished with status 'done'
2020-09-20T04:15:22,278   Created wheel for pancake: filename=pancake-1.1-py3-none-any.whl size=35734 sha256=b9ea3ef4f0936454bd5df64b407847956c987a8421c87efc046559f4db8ed8a1
2020-09-20T04:15:22,279   Stored in directory: /tmp/pip-ephem-wheel-cache-yrsbnhiu/wheels/ba/f1/4d/c5b3b6b4d2ba5e044d187eb9c6b142fc65e8ead4760889c15f
2020-09-20T04:15:22,283 Successfully built pancake
2020-09-20T04:15:22,296 Removed build tracker: '/tmp/pip-req-tracker-xon8obvu'