2020-09-20T06:31:36,320 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2020-09-20T06:31:36,978 Created temporary directory: /tmp/pip-ephem-wheel-cache-955wgea9 2020-09-20T06:31:36,983 Created temporary directory: /tmp/pip-req-tracker-j9egl8id 2020-09-20T06:31:36,984 Initialized build tracking at /tmp/pip-req-tracker-j9egl8id 2020-09-20T06:31:36,985 Created build tracker: /tmp/pip-req-tracker-j9egl8id 2020-09-20T06:31:36,985 Entered build tracker: /tmp/pip-req-tracker-j9egl8id 2020-09-20T06:31:36,986 Created temporary directory: /tmp/pip-wheel-7s84p_aq 2020-09-20T06:31:37,003 1 location(s) to search for versions of medpy: 2020-09-20T06:31:37,003 * https://pypi.org/simple/medpy/ 2020-09-20T06:31:37,004 Fetching project page and analyzing links: https://pypi.org/simple/medpy/ 2020-09-20T06:31:37,006 Getting page https://pypi.org/simple/medpy/ 2020-09-20T06:31:37,010 Found index url https://pypi.org/simple 2020-09-20T06:31:37,332 Found link https://files.pythonhosted.org/packages/3c/58/2e9ff990bd45e9bd0ca0a0b074431f8f22a17ead90c9e14c12715edc757f/MedPy-0.1.0.tar.gz#sha256=8d40cd11816a637fb12e5eb9cfbfcde7c549d3f98ab2030426fcd177b59be6d7 (from https://pypi.org/simple/medpy/), version: 0.1.0 2020-09-20T06:31:37,333 Found link https://files.pythonhosted.org/packages/96/9f/d3601eb915080c5071628113bada52d2f358d0c7fb518dc92ad426aa3f53/MedPy-0.2.0.tar.gz#sha256=512f6383d0568944f87c2f64891d8cabb444982395f016a6fcaa274484dbab33 (from https://pypi.org/simple/medpy/), version: 0.2.0 2020-09-20T06:31:37,334 Found link https://files.pythonhosted.org/packages/46/9e/376b954e024f930f0e707ac114d91c3118c354c4a547db2846ff5870e650/MedPy-0.2.1.tar.gz#sha256=3a5abb6c20b6e12d0bbe9e671e827444396955ff6be20a0c28978e4fd568e6cd (from https://pypi.org/simple/medpy/), version: 0.2.1 2020-09-20T06:31:37,334 Found link https://files.pythonhosted.org/packages/5f/a1/68212f8c27610458796fd886a58f67715773071dfaa77dd4ccf4527ded42/MedPy-0.2.2.tar.gz#sha256=99786e370440dd3d09b3b01181cffb06eb4509a66d7448197995f5dc84205728 (from https://pypi.org/simple/medpy/), version: 0.2.2 2020-09-20T06:31:37,335 Found link https://files.pythonhosted.org/packages/23/62/b01a85e766a7d04cf1c93b6bc94aca1530c9fe038154d1a6095fcacc1be8/MedPy-0.3.0.tar.gz#sha256=299d1be28df0b9c35e856177ada7555746d5b94a0f7af34dc3c3dd3671252a6a (from https://pypi.org/simple/medpy/), version: 0.3.0 2020-09-20T06:31:37,336 Found link https://files.pythonhosted.org/packages/3b/70/c1fd5dd60242eee81774696ea7ba4caafac2bad8f028bba94b1af83777d7/MedPy-0.4.0.tar.gz#sha256=f8a94937dbb947ab069e767862dc6b86896b153c41ce8ed9369c7d79c0033a88 (from https://pypi.org/simple/medpy/), version: 0.4.0 2020-09-20T06:31:37,347 Given no hashes to check 1 links for project 'medpy': discarding no candidates 2020-09-20T06:31:37,349 Using version 0.2.1 (newest of versions: 0.2.1) 2020-09-20T06:31:37,357 Collecting medpy==0.2.1 2020-09-20T06:31:37,363 Created temporary directory: /tmp/pip-unpack-1zpa_f2y 2020-09-20T06:31:37,716 Downloading MedPy-0.2.1.tar.gz (158 kB) 2020-09-20T06:31:38,541 Added medpy==0.2.1 from https://files.pythonhosted.org/packages/46/9e/376b954e024f930f0e707ac114d91c3118c354c4a547db2846ff5870e650/MedPy-0.2.1.tar.gz#sha256=3a5abb6c20b6e12d0bbe9e671e827444396955ff6be20a0c28978e4fd568e6cd to build tracker '/tmp/pip-req-tracker-j9egl8id' 2020-09-20T06:31:38,543 Running setup.py (path:/tmp/pip-wheel-7s84p_aq/medpy/setup.py) egg_info for package medpy 2020-09-20T06:31:38,545 Created temporary directory: /tmp/pip-pip-egg-info-9bid5hat 2020-09-20T06:31:38,546 Running command python setup.py egg_info 2020-09-20T06:31:40,794 running egg_info 2020-09-20T06:31:40,799 creating /tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info 2020-09-20T06:31:40,803 writing dependency_links to /tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info/dependency_links.txt 2020-09-20T06:31:40,805 writing /tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info/PKG-INFO 2020-09-20T06:31:40,813 writing top-level names to /tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info/top_level.txt 2020-09-20T06:31:40,815 writing requirements to /tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info/requires.txt 2020-09-20T06:31:40,820 writing manifest file '/tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info/SOURCES.txt' 2020-09-20T06:31:41,249 reading manifest file '/tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info/SOURCES.txt' 2020-09-20T06:31:41,253 reading manifest template 'MANIFEST.in' 2020-09-20T06:31:41,266 warning: no files found matching 'lib/maxflow/src/readme' 2020-09-20T06:31:41,285 writing manifest file '/tmp/pip-pip-egg-info-9bid5hat/MedPy.egg-info/SOURCES.txt' 2020-09-20T06:31:41,434 Source in /tmp/pip-wheel-7s84p_aq/medpy has version 0.2.1, which satisfies requirement medpy==0.2.1 from https://files.pythonhosted.org/packages/46/9e/376b954e024f930f0e707ac114d91c3118c354c4a547db2846ff5870e650/MedPy-0.2.1.tar.gz#sha256=3a5abb6c20b6e12d0bbe9e671e827444396955ff6be20a0c28978e4fd568e6cd 2020-09-20T06:31:41,437 Removed medpy==0.2.1 from https://files.pythonhosted.org/packages/46/9e/376b954e024f930f0e707ac114d91c3118c354c4a547db2846ff5870e650/MedPy-0.2.1.tar.gz#sha256=3a5abb6c20b6e12d0bbe9e671e827444396955ff6be20a0c28978e4fd568e6cd from build tracker '/tmp/pip-req-tracker-j9egl8id' 2020-09-20T06:31:41,456 Building wheels for collected packages: medpy 2020-09-20T06:31:41,467 Created temporary directory: /tmp/pip-wheel-n5z_vjgf 2020-09-20T06:31:41,468 Building wheel for medpy (setup.py): started 2020-09-20T06:31:41,469 Destination directory: /tmp/pip-wheel-n5z_vjgf 2020-09-20T06:31:41,469 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-7s84p_aq/medpy/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-7s84p_aq/medpy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-n5z_vjgf 2020-09-20T06:31:43,624 running bdist_wheel 2020-09-20T06:31:43,636 running build 2020-09-20T06:31:43,637 running build_py 2020-09-20T06:31:43,975 creating build 2020-09-20T06:31:43,976 creating build/lib.linux-armv7l-3.5 2020-09-20T06:31:43,977 creating build/lib.linux-armv7l-3.5/medpy 2020-09-20T06:31:43,980 copying medpy/__init__.py -> build/lib.linux-armv7l-3.5/medpy 2020-09-20T06:31:43,986 creating build/lib.linux-armv7l-3.5/medpy/core 2020-09-20T06:31:43,988 copying medpy/core/logger.py -> build/lib.linux-armv7l-3.5/medpy/core 2020-09-20T06:31:43,993 copying medpy/core/exceptions.py -> build/lib.linux-armv7l-3.5/medpy/core 2020-09-20T06:31:43,997 copying medpy/core/__init__.py -> build/lib.linux-armv7l-3.5/medpy/core 2020-09-20T06:31:44,002 creating build/lib.linux-armv7l-3.5/medpy/features 2020-09-20T06:31:44,004 copying medpy/features/histogram.py -> build/lib.linux-armv7l-3.5/medpy/features 2020-09-20T06:31:44,012 copying medpy/features/__init__.py -> build/lib.linux-armv7l-3.5/medpy/features 2020-09-20T06:31:44,017 copying medpy/features/utilities.py -> build/lib.linux-armv7l-3.5/medpy/features 2020-09-20T06:31:44,023 copying medpy/features/intensity.py -> build/lib.linux-armv7l-3.5/medpy/features 2020-09-20T06:31:44,036 creating build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,038 copying medpy/filter/noise.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,045 copying medpy/filter/IntensityRangeStandardization.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,053 copying medpy/filter/MinimaExtraction.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,057 copying medpy/filter/image.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,062 copying medpy/filter/houghtransform.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,067 copying medpy/filter/otsu.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,073 copying medpy/filter/binary.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,079 copying medpy/filter/label.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,085 copying medpy/filter/__init__.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,090 copying medpy/filter/utilities.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,097 copying medpy/filter/smoothing.py -> build/lib.linux-armv7l-3.5/medpy/filter 2020-09-20T06:31:44,105 creating build/lib.linux-armv7l-3.5/medpy/io 2020-09-20T06:31:44,108 copying medpy/io/load.py -> build/lib.linux-armv7l-3.5/medpy/io 2020-09-20T06:31:44,114 copying medpy/io/header.py -> build/lib.linux-armv7l-3.5/medpy/io 2020-09-20T06:31:44,120 copying medpy/io/__init__.py -> build/lib.linux-armv7l-3.5/medpy/io 2020-09-20T06:31:44,124 copying medpy/io/save.py -> build/lib.linux-armv7l-3.5/medpy/io 2020-09-20T06:31:44,131 creating build/lib.linux-armv7l-3.5/medpy/itkvtk 2020-09-20T06:31:44,133 copying medpy/itkvtk/__init__.py -> build/lib.linux-armv7l-3.5/medpy/itkvtk 2020-09-20T06:31:44,141 creating build/lib.linux-armv7l-3.5/medpy/itkvtk/filter 2020-09-20T06:31:44,143 copying medpy/itkvtk/filter/watershed.py -> build/lib.linux-armv7l-3.5/medpy/itkvtk/filter 2020-09-20T06:31:44,149 copying medpy/itkvtk/filter/gradient.py -> build/lib.linux-armv7l-3.5/medpy/itkvtk/filter 2020-09-20T06:31:44,154 copying medpy/itkvtk/filter/__init__.py -> build/lib.linux-armv7l-3.5/medpy/itkvtk/filter 2020-09-20T06:31:44,159 creating build/lib.linux-armv7l-3.5/medpy/itkvtk/utilities 2020-09-20T06:31:44,161 copying medpy/itkvtk/utilities/vtku.py -> build/lib.linux-armv7l-3.5/medpy/itkvtk/utilities 2020-09-20T06:31:44,166 copying medpy/itkvtk/utilities/__init__.py -> build/lib.linux-armv7l-3.5/medpy/itkvtk/utilities 2020-09-20T06:31:44,170 copying medpy/itkvtk/utilities/itku.py -> build/lib.linux-armv7l-3.5/medpy/itkvtk/utilities 2020-09-20T06:31:44,179 creating build/lib.linux-armv7l-3.5/medpy/metric 2020-09-20T06:31:44,181 copying medpy/metric/image.py -> build/lib.linux-armv7l-3.5/medpy/metric 2020-09-20T06:31:44,188 copying medpy/metric/histogram.py -> build/lib.linux-armv7l-3.5/medpy/metric 2020-09-20T06:31:44,196 copying medpy/metric/binary.py -> build/lib.linux-armv7l-3.5/medpy/metric 2020-09-20T06:31:44,206 copying medpy/metric/__init__.py -> build/lib.linux-armv7l-3.5/medpy/metric 2020-09-20T06:31:44,212 creating build/lib.linux-armv7l-3.5/medpy/utilities 2020-09-20T06:31:44,215 copying medpy/utilities/nibabelu.py -> build/lib.linux-armv7l-3.5/medpy/utilities 2020-09-20T06:31:44,219 copying medpy/utilities/__init__.py -> build/lib.linux-armv7l-3.5/medpy/utilities 2020-09-20T06:31:44,224 copying medpy/utilities/argparseu.py -> build/lib.linux-armv7l-3.5/medpy/utilities 2020-09-20T06:31:44,231 creating build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,234 copying medpy/graphcut/generate.py -> build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,242 copying medpy/graphcut/energy_voxel.py -> build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,251 copying medpy/graphcut/graph.py -> build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,259 copying medpy/graphcut/__init__.py -> build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,265 copying medpy/graphcut/energy_label.py -> build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,273 copying medpy/graphcut/write.py -> build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,278 copying medpy/graphcut/wrapper.py -> build/lib.linux-armv7l-3.5/medpy/graphcut 2020-09-20T06:31:44,297 running build_ext 2020-09-20T06:31:44,308 building 'medpy.graphcut.maxflow' extension 2020-09-20T06:31:44,310 creating build/temp.linux-armv7l-3.5 2020-09-20T06:31:44,310 creating build/temp.linux-armv7l-3.5/lib 2020-09-20T06:31:44,312 creating build/temp.linux-armv7l-3.5/lib/maxflow 2020-09-20T06:31:44,314 creating build/temp.linux-armv7l-3.5/lib/maxflow/src 2020-09-20T06:31:44,316 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-U0sDci/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DMAJOR_VERSION=0 -DMINOR_VERSION=1 -I/usr/include/python3.5m -c lib/maxflow/src/maxflow.cpp -o build/temp.linux-armv7l-3.5/lib/maxflow/src/maxflow.o -O0 2020-09-20T06:31:44,348 cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ 2020-09-20T06:31:45,808 lib/maxflow/src/maxflow.cpp: In instantiation of 'flowtype Graph::maxflow(bool, Block*) [with captype = int; tcaptype = int; flowtype = int]': 2020-09-20T06:31:45,810 lib/maxflow/src/instances.inc:12:16: required from here 2020-09-20T06:31:45,811 lib/maxflow/src/maxflow.cpp:484:84: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,811 if (maxflow_iteration == 0 && reuse_trees) { if (error_function) (*error_function)("reuse_trees cannot be used in the first call to maxflow()!"); exit(1); } 2020-09-20T06:31:45,812 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,813 lib/maxflow/src/maxflow.cpp:485:75: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,814 if (changed_list && !reuse_trees) { if (error_function) (*error_function)("changed_list cannot be used without reuse_trees!"); exit(1); } 2020-09-20T06:31:45,815 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,824 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_source_orphan(Graph::node*) [with captype = int; tcaptype = int; flowtype = int]': 2020-09-20T06:31:45,825 lib/maxflow/src/instances.inc:12:16: required from here 2020-09-20T06:31:45,825 lib/maxflow/src/maxflow.cpp:366:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,826 if (i->parent = a0_min) 2020-09-20T06:31:45,827 ^~ 2020-09-20T06:31:45,828 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_sink_orphan(Graph::node*) [with captype = int; tcaptype = int; flowtype = int]': 2020-09-20T06:31:45,829 lib/maxflow/src/instances.inc:12:16: required from here 2020-09-20T06:31:45,830 lib/maxflow/src/maxflow.cpp:443:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,830 if (i->parent = a0_min) 2020-09-20T06:31:45,831 ^~ 2020-09-20T06:31:45,835 lib/maxflow/src/maxflow.cpp: In instantiation of 'flowtype Graph::maxflow(bool, Block*) [with captype = short int; tcaptype = int; flowtype = int]': 2020-09-20T06:31:45,836 lib/maxflow/src/instances.inc:13:16: required from here 2020-09-20T06:31:45,837 lib/maxflow/src/maxflow.cpp:484:84: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,838 if (maxflow_iteration == 0 && reuse_trees) { if (error_function) (*error_function)("reuse_trees cannot be used in the first call to maxflow()!"); exit(1); } 2020-09-20T06:31:45,838 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,839 lib/maxflow/src/maxflow.cpp:485:75: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,840 if (changed_list && !reuse_trees) { if (error_function) (*error_function)("changed_list cannot be used without reuse_trees!"); exit(1); } 2020-09-20T06:31:45,841 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,850 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_source_orphan(Graph::node*) [with captype = short int; tcaptype = int; flowtype = int]': 2020-09-20T06:31:45,851 lib/maxflow/src/instances.inc:13:16: required from here 2020-09-20T06:31:45,852 lib/maxflow/src/maxflow.cpp:366:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,853 if (i->parent = a0_min) 2020-09-20T06:31:45,854 ^~ 2020-09-20T06:31:45,854 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_sink_orphan(Graph::node*) [with captype = short int; tcaptype = int; flowtype = int]': 2020-09-20T06:31:45,855 lib/maxflow/src/instances.inc:13:16: required from here 2020-09-20T06:31:45,856 lib/maxflow/src/maxflow.cpp:443:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,857 if (i->parent = a0_min) 2020-09-20T06:31:45,857 ^~ 2020-09-20T06:31:45,861 lib/maxflow/src/maxflow.cpp: In instantiation of 'flowtype Graph::maxflow(bool, Block*) [with captype = float; tcaptype = float; flowtype = float]': 2020-09-20T06:31:45,862 lib/maxflow/src/instances.inc:14:16: required from here 2020-09-20T06:31:45,863 lib/maxflow/src/maxflow.cpp:484:84: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,864 if (maxflow_iteration == 0 && reuse_trees) { if (error_function) (*error_function)("reuse_trees cannot be used in the first call to maxflow()!"); exit(1); } 2020-09-20T06:31:45,864 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,865 lib/maxflow/src/maxflow.cpp:485:75: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,866 if (changed_list && !reuse_trees) { if (error_function) (*error_function)("changed_list cannot be used without reuse_trees!"); exit(1); } 2020-09-20T06:31:45,867 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,877 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_source_orphan(Graph::node*) [with captype = float; tcaptype = float; flowtype = float]': 2020-09-20T06:31:45,877 lib/maxflow/src/instances.inc:14:16: required from here 2020-09-20T06:31:45,878 lib/maxflow/src/maxflow.cpp:366:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,879 if (i->parent = a0_min) 2020-09-20T06:31:45,880 ^~ 2020-09-20T06:31:45,881 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_sink_orphan(Graph::node*) [with captype = float; tcaptype = float; flowtype = float]': 2020-09-20T06:31:45,881 lib/maxflow/src/instances.inc:14:16: required from here 2020-09-20T06:31:45,882 lib/maxflow/src/maxflow.cpp:443:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,883 if (i->parent = a0_min) 2020-09-20T06:31:45,884 ^~ 2020-09-20T06:31:45,888 lib/maxflow/src/maxflow.cpp: In instantiation of 'flowtype Graph::maxflow(bool, Block*) [with captype = double; tcaptype = double; flowtype = double]': 2020-09-20T06:31:45,889 lib/maxflow/src/instances.inc:15:16: required from here 2020-09-20T06:31:45,890 lib/maxflow/src/maxflow.cpp:484:84: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,890 if (maxflow_iteration == 0 && reuse_trees) { if (error_function) (*error_function)("reuse_trees cannot be used in the first call to maxflow()!"); exit(1); } 2020-09-20T06:31:45,891 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,892 lib/maxflow/src/maxflow.cpp:485:75: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,893 if (changed_list && !reuse_trees) { if (error_function) (*error_function)("changed_list cannot be used without reuse_trees!"); exit(1); } 2020-09-20T06:31:45,894 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,903 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_source_orphan(Graph::node*) [with captype = double; tcaptype = double; flowtype = double]': 2020-09-20T06:31:45,904 lib/maxflow/src/instances.inc:15:16: required from here 2020-09-20T06:31:45,905 lib/maxflow/src/maxflow.cpp:366:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,906 if (i->parent = a0_min) 2020-09-20T06:31:45,906 ^~ 2020-09-20T06:31:45,907 lib/maxflow/src/maxflow.cpp: In instantiation of 'void Graph::process_sink_orphan(Graph::node*) [with captype = double; tcaptype = double; flowtype = double]': 2020-09-20T06:31:45,908 lib/maxflow/src/instances.inc:15:16: required from here 2020-09-20T06:31:45,909 lib/maxflow/src/maxflow.cpp:443:2: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 2020-09-20T06:31:45,910 if (i->parent = a0_min) 2020-09-20T06:31:45,910 ^~ 2020-09-20T06:31:45,933 In file included from lib/maxflow/src/graph.h:42:0, 2020-09-20T06:31:45,933 from lib/maxflow/src/maxflow.cpp:5: 2020-09-20T06:31:45,934 lib/maxflow/src/block.h: In instantiation of 'Type* DBlock::New() [with Type = Graph::nodeptr]': 2020-09-20T06:31:45,935 lib/maxflow/src/maxflow.cpp:84:5: required from 'void Graph::set_orphan_front(Graph::node*) [with captype = int; tcaptype = int; flowtype = int]' 2020-09-20T06:31:45,936 lib/maxflow/src/instances.inc:12:16: required from here 2020-09-20T06:31:45,937 lib/maxflow/src/block.h:223:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,937 if (!first) { if (error_function) (*error_function)("Not enough memory!"); exit(1); } 2020-09-20T06:31:45,938 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,939 lib/maxflow/src/block.h: In instantiation of 'Type* Block::New(int) [with Type = int]': 2020-09-20T06:31:45,940 lib/maxflow/src/maxflow.cpp:110:35: required from 'void Graph::add_to_changed_list(Graph::node*) [with captype = int; tcaptype = int; flowtype = int]' 2020-09-20T06:31:45,941 lib/maxflow/src/instances.inc:12:16: required from here 2020-09-20T06:31:45,942 lib/maxflow/src/block.h:124:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,943 if (!next) { if (error_function) (*error_function)("Not enough memory!"); exit(1); } 2020-09-20T06:31:45,943 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,944 lib/maxflow/src/block.h: In instantiation of 'Type* DBlock::New() [with Type = Graph::nodeptr]': 2020-09-20T06:31:45,945 lib/maxflow/src/maxflow.cpp:84:5: required from 'void Graph::set_orphan_front(Graph::node*) [with captype = short int; tcaptype = int; flowtype = int]' 2020-09-20T06:31:45,946 lib/maxflow/src/instances.inc:13:16: required from here 2020-09-20T06:31:45,947 lib/maxflow/src/block.h:223:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,947 if (!first) { if (error_function) (*error_function)("Not enough memory!"); exit(1); } 2020-09-20T06:31:45,948 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2020-09-20T06:31:45,949 lib/maxflow/src/block.h: In instantiation of 'Type* DBlock::New() [with Type = Graph::nodeptr]': 2020-09-20T06:31:45,950 lib/maxflow/src/maxflow.cpp:84:5: required from 'void Graph::set_orphan_front(Graph::node*) [with captype = float; tcaptype = float; flowtype = float]' 2020-09-20T06:31:45,951 lib/maxflow/src/instances.inc:14:16: required from here 2020-09-20T06:31:45,952 lib/maxflow/src/block.h:223:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:45,952 lib/maxflow/src/block.h: In instantiation of 'Type* DBlock::New() [with Type = Graph::nodeptr]': 2020-09-20T06:31:45,953 lib/maxflow/src/maxflow.cpp:84:5: required from 'void Graph::set_orphan_front(Graph::node*) [with captype = double; tcaptype = double; flowtype = double]' 2020-09-20T06:31:45,954 lib/maxflow/src/instances.inc:15:16: required from here 2020-09-20T06:31:45,955 lib/maxflow/src/block.h:223:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2020-09-20T06:31:47,341 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-U0sDci/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DMAJOR_VERSION=0 -DMINOR_VERSION=1 -I/usr/include/python3.5m -c lib/maxflow/src/wrapper.cpp -o build/temp.linux-armv7l-3.5/lib/maxflow/src/wrapper.o -O0 2020-09-20T06:31:47,378 cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ 2020-09-20T06:31:47,741 lib/maxflow/src/wrapper.cpp:2:28: fatal error: boost/python.hpp: No such file or directory 2020-09-20T06:31:47,742 #include 2020-09-20T06:31:47,743 ^ 2020-09-20T06:31:47,743 compilation terminated. 2020-09-20T06:31:47,748 *************************************************************************** 2020-09-20T06:31:47,749 WARNING: The medpy.graphcut.maxflow external C++ package could not be compiled, all graphcut functionality will be disabled. You might be missing Boost.Python or some build essentials like g++. 2020-09-20T06:31:47,750 Failure information, if any, is above. 2020-09-20T06:31:47,751 I'm retrying the build without the graphcut C++ module now. 2020-09-20T06:31:47,751 *************************************************************************** 2020-09-20T06:31:47,822 running bdist_wheel 2020-09-20T06:31:47,826 running build 2020-09-20T06:31:47,827 running build_py 2020-09-20T06:31:47,830 creating build/lib 2020-09-20T06:31:47,831 creating build/lib/medpy 2020-09-20T06:31:47,833 copying medpy/__init__.py -> build/lib/medpy 2020-09-20T06:31:47,839 creating build/lib/medpy/core 2020-09-20T06:31:47,841 copying medpy/core/logger.py -> build/lib/medpy/core 2020-09-20T06:31:47,846 copying medpy/core/exceptions.py -> build/lib/medpy/core 2020-09-20T06:31:47,850 copying medpy/core/__init__.py -> build/lib/medpy/core 2020-09-20T06:31:47,855 creating build/lib/medpy/features 2020-09-20T06:31:47,857 copying medpy/features/histogram.py -> build/lib/medpy/features 2020-09-20T06:31:47,863 copying medpy/features/__init__.py -> build/lib/medpy/features 2020-09-20T06:31:47,869 copying medpy/features/utilities.py -> build/lib/medpy/features 2020-09-20T06:31:47,875 copying medpy/features/intensity.py -> build/lib/medpy/features 2020-09-20T06:31:47,888 creating build/lib/medpy/filter 2020-09-20T06:31:47,890 copying medpy/filter/noise.py -> build/lib/medpy/filter 2020-09-20T06:31:47,896 copying medpy/filter/IntensityRangeStandardization.py -> build/lib/medpy/filter 2020-09-20T06:31:47,902 copying medpy/filter/MinimaExtraction.py -> build/lib/medpy/filter 2020-09-20T06:31:47,906 copying medpy/filter/image.py -> build/lib/medpy/filter 2020-09-20T06:31:47,913 copying medpy/filter/houghtransform.py -> build/lib/medpy/filter 2020-09-20T06:31:47,920 copying medpy/filter/otsu.py -> build/lib/medpy/filter 2020-09-20T06:31:47,926 copying medpy/filter/binary.py -> build/lib/medpy/filter 2020-09-20T06:31:47,932 copying medpy/filter/label.py -> build/lib/medpy/filter 2020-09-20T06:31:47,938 copying medpy/filter/__init__.py -> build/lib/medpy/filter 2020-09-20T06:31:47,943 copying medpy/filter/utilities.py -> build/lib/medpy/filter 2020-09-20T06:31:47,950 copying medpy/filter/smoothing.py -> build/lib/medpy/filter 2020-09-20T06:31:47,956 creating build/lib/medpy/io 2020-09-20T06:31:47,958 copying medpy/io/load.py -> build/lib/medpy/io 2020-09-20T06:31:47,964 copying medpy/io/header.py -> build/lib/medpy/io 2020-09-20T06:31:47,970 copying medpy/io/__init__.py -> build/lib/medpy/io 2020-09-20T06:31:47,975 copying medpy/io/save.py -> build/lib/medpy/io 2020-09-20T06:31:47,984 creating build/lib/medpy/itkvtk 2020-09-20T06:31:47,986 copying medpy/itkvtk/__init__.py -> build/lib/medpy/itkvtk 2020-09-20T06:31:47,993 creating build/lib/medpy/itkvtk/filter 2020-09-20T06:31:47,995 copying medpy/itkvtk/filter/watershed.py -> build/lib/medpy/itkvtk/filter 2020-09-20T06:31:48,000 copying medpy/itkvtk/filter/gradient.py -> build/lib/medpy/itkvtk/filter 2020-09-20T06:31:48,004 copying medpy/itkvtk/filter/__init__.py -> build/lib/medpy/itkvtk/filter 2020-09-20T06:31:48,009 creating build/lib/medpy/itkvtk/utilities 2020-09-20T06:31:48,012 copying medpy/itkvtk/utilities/vtku.py -> build/lib/medpy/itkvtk/utilities 2020-09-20T06:31:48,019 copying medpy/itkvtk/utilities/__init__.py -> build/lib/medpy/itkvtk/utilities 2020-09-20T06:31:48,024 copying medpy/itkvtk/utilities/itku.py -> build/lib/medpy/itkvtk/utilities 2020-09-20T06:31:48,033 creating build/lib/medpy/metric 2020-09-20T06:31:48,035 copying medpy/metric/image.py -> build/lib/medpy/metric 2020-09-20T06:31:48,040 copying medpy/metric/histogram.py -> build/lib/medpy/metric 2020-09-20T06:31:48,047 copying medpy/metric/binary.py -> build/lib/medpy/metric 2020-09-20T06:31:48,055 copying medpy/metric/__init__.py -> build/lib/medpy/metric 2020-09-20T06:31:48,062 creating build/lib/medpy/utilities 2020-09-20T06:31:48,064 copying medpy/utilities/nibabelu.py -> build/lib/medpy/utilities 2020-09-20T06:31:48,070 copying medpy/utilities/__init__.py -> build/lib/medpy/utilities 2020-09-20T06:31:48,074 copying medpy/utilities/argparseu.py -> build/lib/medpy/utilities 2020-09-20T06:31:48,093 running build_scripts 2020-09-20T06:31:48,094 creating build/scripts-3.5 2020-09-20T06:31:48,097 copying and adjusting bin/medpy_anisotropic_diffusion.py -> build/scripts-3.5 2020-09-20T06:31:48,102 copying and adjusting bin/medpy_apparent_diffusion_coefficient.py -> build/scripts-3.5 2020-09-20T06:31:48,107 copying and adjusting bin/medpy_check_marker_intersection.py -> build/scripts-3.5 2020-09-20T06:31:48,111 copying and adjusting bin/medpy_convert.py -> build/scripts-3.5 2020-09-20T06:31:48,117 copying and adjusting bin/medpy_count_labels.py -> build/scripts-3.5 2020-09-20T06:31:48,123 copying and adjusting bin/medpy_create_empty_volume_by_example.py -> build/scripts-3.5 2020-09-20T06:31:48,128 copying and adjusting bin/medpy_dicom_slices_to_volume.py -> build/scripts-3.5 2020-09-20T06:31:48,134 copying and adjusting bin/medpy_dicom_to_4D.py -> build/scripts-3.5 2020-09-20T06:31:48,141 copying and adjusting bin/medpy_diff.py -> build/scripts-3.5 2020-09-20T06:31:48,147 copying and adjusting bin/medpy_extract_contour.py -> build/scripts-3.5 2020-09-20T06:31:48,153 copying and adjusting bin/medpy_extract_min_max.py -> build/scripts-3.5 2020-09-20T06:31:48,159 copying and adjusting bin/medpy_extract_sub_volume_auto.py -> build/scripts-3.5 2020-09-20T06:31:48,165 copying and adjusting bin/medpy_extract_sub_volume_by_example.py -> build/scripts-3.5 2020-09-20T06:31:48,172 copying and adjusting bin/medpy_extract_sub_volume.py -> build/scripts-3.5 2020-09-20T06:31:48,179 copying and adjusting bin/medpy_gradient.py -> build/scripts-3.5 2020-09-20T06:31:48,185 copying and adjusting bin/medpy_graphcut_label_bgreduced.py -> build/scripts-3.5 2020-09-20T06:31:48,192 copying and adjusting bin/medpy_graphcut_label_w_regional.py -> build/scripts-3.5 2020-09-20T06:31:48,199 copying and adjusting bin/medpy_graphcut_label_wsplit.py -> build/scripts-3.5 2020-09-20T06:31:48,206 copying and adjusting bin/medpy_graphcut_label.py -> build/scripts-3.5 2020-09-20T06:31:48,213 copying and adjusting bin/medpy_graphcut_voxel.py -> build/scripts-3.5 2020-09-20T06:31:48,218 copying and adjusting bin/medpy_grid.py -> build/scripts-3.5 2020-09-20T06:31:48,224 copying and adjusting bin/medpy_info.py -> build/scripts-3.5 2020-09-20T06:31:48,228 copying and adjusting bin/medpy_intensity_range_standardization.py -> build/scripts-3.5 2020-09-20T06:31:48,233 copying and adjusting bin/medpy_intersection.py -> build/scripts-3.5 2020-09-20T06:31:48,240 copying and adjusting bin/medpy_itk_gradient.py -> build/scripts-3.5 2020-09-20T06:31:48,246 copying and adjusting bin/medpy_itk_smoothing.py -> build/scripts-3.5 2020-09-20T06:31:48,252 copying and adjusting bin/medpy_itk_watershed.py -> build/scripts-3.5 2020-09-20T06:31:48,257 copying and adjusting bin/medpy_join_masks.py -> build/scripts-3.5 2020-09-20T06:31:48,262 copying and adjusting bin/medpy_join_xd_to_xplus1d.py -> build/scripts-3.5 2020-09-20T06:31:48,267 copying and adjusting bin/medpy_merge.py -> build/scripts-3.5 2020-09-20T06:31:48,271 copying and adjusting bin/medpy_morphology.py -> build/scripts-3.5 2020-09-20T06:31:48,276 copying and adjusting bin/medpy_reduce.py -> build/scripts-3.5 2020-09-20T06:31:48,283 copying and adjusting bin/medpy_resample.py -> build/scripts-3.5 2020-09-20T06:31:48,289 copying and adjusting bin/medpy_reslice_3d_to_4d.py -> build/scripts-3.5 2020-09-20T06:31:48,295 copying and adjusting bin/medpy_set_pixel_spacing.py -> build/scripts-3.5 2020-09-20T06:31:48,300 copying and adjusting bin/medpy_shrink_image.py -> build/scripts-3.5 2020-09-20T06:31:48,304 copying and adjusting bin/medpy_split_xd_to_xminus1d.py -> build/scripts-3.5 2020-09-20T06:31:48,309 copying and adjusting bin/medpy_stack_sub_volumes.py -> build/scripts-3.5 2020-09-20T06:31:48,314 copying and adjusting bin/medpy_superimposition.py -> build/scripts-3.5 2020-09-20T06:31:48,320 copying and adjusting bin/medpy_swap_dimensions.py -> build/scripts-3.5 2020-09-20T06:31:48,327 copying and adjusting bin/medpy_watershed.py -> build/scripts-3.5 2020-09-20T06:31:48,333 copying and adjusting bin/medpy_zoom_image.py -> build/scripts-3.5 2020-09-20T06:31:48,337 changing mode of build/scripts-3.5/medpy_anisotropic_diffusion.py from 644 to 755 2020-09-20T06:31:48,338 changing mode of build/scripts-3.5/medpy_apparent_diffusion_coefficient.py from 644 to 755 2020-09-20T06:31:48,338 changing mode of build/scripts-3.5/medpy_check_marker_intersection.py from 644 to 755 2020-09-20T06:31:48,339 changing mode of build/scripts-3.5/medpy_convert.py from 644 to 755 2020-09-20T06:31:48,340 changing mode of build/scripts-3.5/medpy_count_labels.py from 644 to 755 2020-09-20T06:31:48,340 changing mode of build/scripts-3.5/medpy_create_empty_volume_by_example.py from 644 to 755 2020-09-20T06:31:48,341 changing mode of build/scripts-3.5/medpy_dicom_slices_to_volume.py from 644 to 755 2020-09-20T06:31:48,342 changing mode of build/scripts-3.5/medpy_dicom_to_4D.py from 644 to 755 2020-09-20T06:31:48,343 changing mode of build/scripts-3.5/medpy_diff.py from 644 to 755 2020-09-20T06:31:48,343 changing mode of build/scripts-3.5/medpy_extract_contour.py from 644 to 755 2020-09-20T06:31:48,344 changing mode of build/scripts-3.5/medpy_extract_min_max.py from 644 to 755 2020-09-20T06:31:48,345 changing mode of build/scripts-3.5/medpy_extract_sub_volume_auto.py from 644 to 755 2020-09-20T06:31:48,345 changing mode of build/scripts-3.5/medpy_extract_sub_volume_by_example.py from 644 to 755 2020-09-20T06:31:48,346 changing mode of build/scripts-3.5/medpy_extract_sub_volume.py from 644 to 755 2020-09-20T06:31:48,347 changing mode of build/scripts-3.5/medpy_gradient.py from 644 to 755 2020-09-20T06:31:48,347 changing mode of build/scripts-3.5/medpy_graphcut_label_bgreduced.py from 644 to 755 2020-09-20T06:31:48,348 changing mode of build/scripts-3.5/medpy_graphcut_label_w_regional.py from 644 to 755 2020-09-20T06:31:48,349 changing mode of build/scripts-3.5/medpy_graphcut_label_wsplit.py from 644 to 755 2020-09-20T06:31:48,349 changing mode of build/scripts-3.5/medpy_graphcut_label.py from 644 to 755 2020-09-20T06:31:48,350 changing mode of build/scripts-3.5/medpy_graphcut_voxel.py from 644 to 755 2020-09-20T06:31:48,351 changing mode of build/scripts-3.5/medpy_grid.py from 644 to 755 2020-09-20T06:31:48,351 changing mode of build/scripts-3.5/medpy_info.py from 644 to 755 2020-09-20T06:31:48,352 changing mode of build/scripts-3.5/medpy_intensity_range_standardization.py from 644 to 755 2020-09-20T06:31:48,353 changing mode of build/scripts-3.5/medpy_intersection.py from 644 to 755 2020-09-20T06:31:48,354 changing mode of build/scripts-3.5/medpy_itk_gradient.py from 644 to 755 2020-09-20T06:31:48,354 changing mode of build/scripts-3.5/medpy_itk_smoothing.py from 644 to 755 2020-09-20T06:31:48,355 changing mode of build/scripts-3.5/medpy_itk_watershed.py from 644 to 755 2020-09-20T06:31:48,356 changing mode of build/scripts-3.5/medpy_join_masks.py from 644 to 755 2020-09-20T06:31:48,356 changing mode of build/scripts-3.5/medpy_join_xd_to_xplus1d.py from 644 to 755 2020-09-20T06:31:48,357 changing mode of build/scripts-3.5/medpy_merge.py from 644 to 755 2020-09-20T06:31:48,358 changing mode of build/scripts-3.5/medpy_morphology.py from 644 to 755 2020-09-20T06:31:48,358 changing mode of build/scripts-3.5/medpy_reduce.py from 644 to 755 2020-09-20T06:31:48,361 changing mode of build/scripts-3.5/medpy_resample.py from 644 to 755 2020-09-20T06:31:48,362 changing mode of build/scripts-3.5/medpy_reslice_3d_to_4d.py from 644 to 755 2020-09-20T06:31:48,363 changing mode of build/scripts-3.5/medpy_set_pixel_spacing.py from 644 to 755 2020-09-20T06:31:48,364 changing mode of build/scripts-3.5/medpy_shrink_image.py from 644 to 755 2020-09-20T06:31:48,365 changing mode of build/scripts-3.5/medpy_split_xd_to_xminus1d.py from 644 to 755 2020-09-20T06:31:48,365 changing mode of build/scripts-3.5/medpy_stack_sub_volumes.py from 644 to 755 2020-09-20T06:31:48,366 changing mode of build/scripts-3.5/medpy_superimposition.py from 644 to 755 2020-09-20T06:31:48,367 changing mode of build/scripts-3.5/medpy_swap_dimensions.py from 644 to 755 2020-09-20T06:31:48,368 changing mode of build/scripts-3.5/medpy_watershed.py from 644 to 755 2020-09-20T06:31:48,368 changing mode of build/scripts-3.5/medpy_zoom_image.py from 644 to 755 2020-09-20T06:31:48,375 installing to build/bdist.linux-armv7l/wheel 2020-09-20T06:31:48,376 running install 2020-09-20T06:31:48,378 running install_lib 2020-09-20T06:31:48,386 creating build/bdist.linux-armv7l 2020-09-20T06:31:48,386 creating build/bdist.linux-armv7l/wheel 2020-09-20T06:31:48,390 creating build/bdist.linux-armv7l/wheel/medpy 2020-09-20T06:31:48,394 creating build/bdist.linux-armv7l/wheel/medpy/utilities 2020-09-20T06:31:48,396 copying build/lib/medpy/utilities/nibabelu.py -> build/bdist.linux-armv7l/wheel/medpy/utilities 2020-09-20T06:31:48,401 copying build/lib/medpy/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/utilities 2020-09-20T06:31:48,405 copying build/lib/medpy/utilities/argparseu.py -> build/bdist.linux-armv7l/wheel/medpy/utilities 2020-09-20T06:31:48,411 creating build/bdist.linux-armv7l/wheel/medpy/io 2020-09-20T06:31:48,413 copying build/lib/medpy/io/load.py -> build/bdist.linux-armv7l/wheel/medpy/io 2020-09-20T06:31:48,420 copying build/lib/medpy/io/header.py -> build/bdist.linux-armv7l/wheel/medpy/io 2020-09-20T06:31:48,427 copying build/lib/medpy/io/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/io 2020-09-20T06:31:48,432 copying build/lib/medpy/io/save.py -> build/bdist.linux-armv7l/wheel/medpy/io 2020-09-20T06:31:48,440 creating build/bdist.linux-armv7l/wheel/medpy/metric 2020-09-20T06:31:48,442 copying build/lib/medpy/metric/image.py -> build/bdist.linux-armv7l/wheel/medpy/metric 2020-09-20T06:31:48,447 copying build/lib/medpy/metric/histogram.py -> build/bdist.linux-armv7l/wheel/medpy/metric 2020-09-20T06:31:48,454 copying build/lib/medpy/metric/binary.py -> build/bdist.linux-armv7l/wheel/medpy/metric 2020-09-20T06:31:48,463 copying build/lib/medpy/metric/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/metric 2020-09-20T06:31:48,470 creating build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,473 copying build/lib/medpy/filter/noise.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,480 copying build/lib/medpy/filter/IntensityRangeStandardization.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,488 copying build/lib/medpy/filter/MinimaExtraction.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,494 copying build/lib/medpy/filter/image.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,500 copying build/lib/medpy/filter/houghtransform.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,505 copying build/lib/medpy/filter/otsu.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,510 copying build/lib/medpy/filter/binary.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,514 copying build/lib/medpy/filter/label.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,519 copying build/lib/medpy/filter/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,549 copying build/lib/medpy/filter/utilities.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,556 copying build/lib/medpy/filter/smoothing.py -> build/bdist.linux-armv7l/wheel/medpy/filter 2020-09-20T06:31:48,564 creating build/bdist.linux-armv7l/wheel/medpy/itkvtk 2020-09-20T06:31:48,568 creating build/bdist.linux-armv7l/wheel/medpy/itkvtk/utilities 2020-09-20T06:31:48,572 copying build/lib/medpy/itkvtk/utilities/vtku.py -> build/bdist.linux-armv7l/wheel/medpy/itkvtk/utilities 2020-09-20T06:31:48,579 copying build/lib/medpy/itkvtk/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/itkvtk/utilities 2020-09-20T06:31:48,584 copying build/lib/medpy/itkvtk/utilities/itku.py -> build/bdist.linux-armv7l/wheel/medpy/itkvtk/utilities 2020-09-20T06:31:48,594 creating build/bdist.linux-armv7l/wheel/medpy/itkvtk/filter 2020-09-20T06:31:48,595 copying build/lib/medpy/itkvtk/filter/watershed.py -> build/bdist.linux-armv7l/wheel/medpy/itkvtk/filter 2020-09-20T06:31:48,600 copying build/lib/medpy/itkvtk/filter/gradient.py -> build/bdist.linux-armv7l/wheel/medpy/itkvtk/filter 2020-09-20T06:31:48,605 copying build/lib/medpy/itkvtk/filter/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/itkvtk/filter 2020-09-20T06:31:48,611 copying build/lib/medpy/itkvtk/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/itkvtk 2020-09-20T06:31:48,618 creating build/bdist.linux-armv7l/wheel/medpy/core 2020-09-20T06:31:48,620 copying build/lib/medpy/core/logger.py -> build/bdist.linux-armv7l/wheel/medpy/core 2020-09-20T06:31:48,626 copying build/lib/medpy/core/exceptions.py -> build/bdist.linux-armv7l/wheel/medpy/core 2020-09-20T06:31:48,631 copying build/lib/medpy/core/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/core 2020-09-20T06:31:48,635 copying build/lib/medpy/__init__.py -> build/bdist.linux-armv7l/wheel/medpy 2020-09-20T06:31:48,640 creating build/bdist.linux-armv7l/wheel/medpy/features 2020-09-20T06:31:48,642 copying build/lib/medpy/features/histogram.py -> build/bdist.linux-armv7l/wheel/medpy/features 2020-09-20T06:31:48,650 copying build/lib/medpy/features/__init__.py -> build/bdist.linux-armv7l/wheel/medpy/features 2020-09-20T06:31:48,656 copying build/lib/medpy/features/utilities.py -> build/bdist.linux-armv7l/wheel/medpy/features 2020-09-20T06:31:48,662 copying build/lib/medpy/features/intensity.py -> build/bdist.linux-armv7l/wheel/medpy/features 2020-09-20T06:31:48,673 running install_egg_info 2020-09-20T06:31:48,714 running egg_info 2020-09-20T06:31:48,717 writing requirements to MedPy.egg-info/requires.txt 2020-09-20T06:31:48,721 writing MedPy.egg-info/PKG-INFO 2020-09-20T06:31:48,729 writing top-level names to MedPy.egg-info/top_level.txt 2020-09-20T06:31:48,732 writing dependency_links to MedPy.egg-info/dependency_links.txt 2020-09-20T06:31:48,754 reading manifest file 'MedPy.egg-info/SOURCES.txt' 2020-09-20T06:31:48,764 reading manifest template 'MANIFEST.in' 2020-09-20T06:31:48,771 warning: no files found matching 'lib/maxflow/src/readme' 2020-09-20T06:31:48,789 writing manifest file 'MedPy.egg-info/SOURCES.txt' 2020-09-20T06:31:48,793 Copying MedPy.egg-info to build/bdist.linux-armv7l/wheel/MedPy-0.2.1-py3.5.egg-info 2020-09-20T06:31:48,822 running install_scripts 2020-09-20T06:31:48,974 creating build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data 2020-09-20T06:31:48,975 creating build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:48,979 copying build/scripts-3.5/medpy_watershed.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:48,985 copying build/scripts-3.5/medpy_morphology.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:48,991 copying build/scripts-3.5/medpy_set_pixel_spacing.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:48,997 copying build/scripts-3.5/medpy_reduce.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,003 copying build/scripts-3.5/medpy_intersection.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,012 copying build/scripts-3.5/medpy_diff.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,019 copying build/scripts-3.5/medpy_extract_sub_volume.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,027 copying build/scripts-3.5/medpy_count_labels.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,033 copying build/scripts-3.5/medpy_resample.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,039 copying build/scripts-3.5/medpy_split_xd_to_xminus1d.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,045 copying build/scripts-3.5/medpy_merge.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,052 copying build/scripts-3.5/medpy_grid.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,061 copying build/scripts-3.5/medpy_itk_gradient.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,067 copying build/scripts-3.5/medpy_dicom_slices_to_volume.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,072 copying build/scripts-3.5/medpy_zoom_image.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,077 copying build/scripts-3.5/medpy_graphcut_label_wsplit.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,107 copying build/scripts-3.5/medpy_check_marker_intersection.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,113 copying build/scripts-3.5/medpy_create_empty_volume_by_example.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,119 copying build/scripts-3.5/medpy_itk_watershed.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,126 copying build/scripts-3.5/medpy_stack_sub_volumes.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,133 copying build/scripts-3.5/medpy_intensity_range_standardization.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,138 copying build/scripts-3.5/medpy_dicom_to_4D.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,144 copying build/scripts-3.5/medpy_info.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,148 copying build/scripts-3.5/medpy_swap_dimensions.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,154 copying build/scripts-3.5/medpy_reslice_3d_to_4d.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,161 copying build/scripts-3.5/medpy_graphcut_voxel.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,168 copying build/scripts-3.5/medpy_extract_min_max.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,174 copying build/scripts-3.5/medpy_join_masks.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,179 copying build/scripts-3.5/medpy_superimposition.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,184 copying build/scripts-3.5/medpy_join_xd_to_xplus1d.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,190 copying build/scripts-3.5/medpy_convert.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,195 copying build/scripts-3.5/medpy_extract_sub_volume_by_example.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,202 copying build/scripts-3.5/medpy_apparent_diffusion_coefficient.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,209 copying build/scripts-3.5/medpy_itk_smoothing.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,215 copying build/scripts-3.5/medpy_shrink_image.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,221 copying build/scripts-3.5/medpy_gradient.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,225 copying build/scripts-3.5/medpy_extract_sub_volume_auto.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,231 copying build/scripts-3.5/medpy_extract_contour.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,237 copying build/scripts-3.5/medpy_graphcut_label_w_regional.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,244 copying build/scripts-3.5/medpy_anisotropic_diffusion.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,250 copying build/scripts-3.5/medpy_graphcut_label.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,257 copying build/scripts-3.5/medpy_graphcut_label_bgreduced.py -> build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts 2020-09-20T06:31:49,263 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_watershed.py to 755 2020-09-20T06:31:49,265 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_morphology.py to 755 2020-09-20T06:31:49,266 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_set_pixel_spacing.py to 755 2020-09-20T06:31:49,267 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_reduce.py to 755 2020-09-20T06:31:49,268 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_intersection.py to 755 2020-09-20T06:31:49,270 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_diff.py to 755 2020-09-20T06:31:49,271 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_extract_sub_volume.py to 755 2020-09-20T06:31:49,272 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_count_labels.py to 755 2020-09-20T06:31:49,273 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_resample.py to 755 2020-09-20T06:31:49,275 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_split_xd_to_xminus1d.py to 755 2020-09-20T06:31:49,276 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_merge.py to 755 2020-09-20T06:31:49,276 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_grid.py to 755 2020-09-20T06:31:49,277 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_itk_gradient.py to 755 2020-09-20T06:31:49,278 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_dicom_slices_to_volume.py to 755 2020-09-20T06:31:49,278 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_zoom_image.py to 755 2020-09-20T06:31:49,279 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_graphcut_label_wsplit.py to 755 2020-09-20T06:31:49,280 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_check_marker_intersection.py to 755 2020-09-20T06:31:49,280 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_create_empty_volume_by_example.py to 755 2020-09-20T06:31:49,281 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_itk_watershed.py to 755 2020-09-20T06:31:49,282 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_stack_sub_volumes.py to 755 2020-09-20T06:31:49,282 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_intensity_range_standardization.py to 755 2020-09-20T06:31:49,283 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_dicom_to_4D.py to 755 2020-09-20T06:31:49,284 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_info.py to 755 2020-09-20T06:31:49,284 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_swap_dimensions.py to 755 2020-09-20T06:31:49,285 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_reslice_3d_to_4d.py to 755 2020-09-20T06:31:49,286 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_graphcut_voxel.py to 755 2020-09-20T06:31:49,286 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_extract_min_max.py to 755 2020-09-20T06:31:49,287 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_join_masks.py to 755 2020-09-20T06:31:49,288 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_superimposition.py to 755 2020-09-20T06:31:49,288 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_join_xd_to_xplus1d.py to 755 2020-09-20T06:31:49,289 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_convert.py to 755 2020-09-20T06:31:49,290 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_extract_sub_volume_by_example.py to 755 2020-09-20T06:31:49,291 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_apparent_diffusion_coefficient.py to 755 2020-09-20T06:31:49,291 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_itk_smoothing.py to 755 2020-09-20T06:31:49,292 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_shrink_image.py to 755 2020-09-20T06:31:49,293 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_gradient.py to 755 2020-09-20T06:31:49,294 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_extract_sub_volume_auto.py to 755 2020-09-20T06:31:49,294 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_extract_contour.py to 755 2020-09-20T06:31:49,295 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_graphcut_label_w_regional.py to 755 2020-09-20T06:31:49,296 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_anisotropic_diffusion.py to 755 2020-09-20T06:31:49,297 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_graphcut_label.py to 755 2020-09-20T06:31:49,297 changing mode of build/bdist.linux-armv7l/wheel/MedPy-0.2.1.data/scripts/medpy_graphcut_label_bgreduced.py to 755 2020-09-20T06:31:49,393 creating build/bdist.linux-armv7l/wheel/MedPy-0.2.1.dist-info/WHEEL 2020-09-20T06:31:49,881 *************************************************************************** 2020-09-20T06:31:49,885 WARNING: The medpy.graphcut.maxflow external C++ package could not be compiled, all graphcut functionality will be disabled. You might be missing Boost.Python or some build essentials like g++. 2020-09-20T06:31:49,886 Plain-Python installation succeeded. 2020-09-20T06:31:49,887 *************************************************************************** 2020-09-20T06:31:50,044 Building wheel for medpy (setup.py): finished with status 'done' 2020-09-20T06:31:50,051 Created wheel for medpy: filename=MedPy-0.2.1-py3-none-any.whl size=186653 sha256=dc24193de530580651f30dd3434379526de0b19ff9f002e63540c5ad1426e826 2020-09-20T06:31:50,052 Stored in directory: /tmp/pip-ephem-wheel-cache-955wgea9/wheels/0f/6f/3e/da81865a0352a3c78c7dfbff46c3694c5e17c12339b6af83a6 2020-09-20T06:31:50,056 Successfully built medpy 2020-09-20T06:31:50,096 Removed build tracker: '/tmp/pip-req-tracker-j9egl8id'