2020-09-20T15:13:50,394 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-20T15:13:51,134 Created temporary directory: /tmp/pip-ephem-wheel-cache-k8uvliki
2020-09-20T15:13:51,139 Created temporary directory: /tmp/pip-req-tracker-3j71fpoc
2020-09-20T15:13:51,140 Initialized build tracking at /tmp/pip-req-tracker-3j71fpoc
2020-09-20T15:13:51,140 Created build tracker: /tmp/pip-req-tracker-3j71fpoc
2020-09-20T15:13:51,141 Entered build tracker: /tmp/pip-req-tracker-3j71fpoc
2020-09-20T15:13:51,142 Created temporary directory: /tmp/pip-wheel-xwrg9_7z
2020-09-20T15:13:51,159 1 location(s) to search for versions of photon-ptm:
2020-09-20T15:13:51,159 * https://pypi.org/simple/photon-ptm/
2020-09-20T15:13:51,160 Fetching project page and analyzing links: https://pypi.org/simple/photon-ptm/
2020-09-20T15:13:51,162 Getting page https://pypi.org/simple/photon-ptm/
2020-09-20T15:13:51,166 Found index url https://pypi.org/simple
2020-09-20T15:13:51,407   Found link https://files.pythonhosted.org/packages/44/cf/99b2ba3a1532a224b1d2ca58df76cfe5744a4c3d3a10cf34c0bacdae80b0/photon_ptm-0.2.0.tar.gz#sha256=37323b9a6c782de66a11a7e980244e8f5b8f6f499a82970bebcb98e214027022 (from https://pypi.org/simple/photon-ptm/), version: 0.2.0
2020-09-20T15:13:51,408   Found link https://files.pythonhosted.org/packages/b2/cc/033880918ac5e59ca5bb2fea598ba1e85550990df30f370d59eed845804e/photon_ptm-0.2.1.tar.gz#sha256=80fe4807a9032cafcea4ca23944cbd17eb4ff15cf1804bb60b9e46d569cf2259 (from https://pypi.org/simple/photon-ptm/), version: 0.2.1
2020-09-20T15:13:51,409   Found link https://files.pythonhosted.org/packages/e5/9a/ed5a90fc79a4f1e6605715b1fbc14e245f7e616156e767e4fb23f24bcaf1/photon_ptm-0.2.2.tar.gz#sha256=1499710d5b85aacf0e9618a78de253c6836e3baa1714d5c90618b5111da9894f (from https://pypi.org/simple/photon-ptm/), version: 0.2.2
2020-09-20T15:13:51,410   Found link https://files.pythonhosted.org/packages/17/0c/5057a42906201cc00b94490c1b4a305b5745147b67e2ea1f2894e1509c8a/photon_ptm-0.2.3.tar.gz#sha256=6b6a374f66dc2d3d742134bab4b98334066eb14984a90bab9bbf3e066c805c97 (from https://pypi.org/simple/photon-ptm/), version: 0.2.3
2020-09-20T15:13:51,411   Found link https://files.pythonhosted.org/packages/c9/f9/f70f048cb9f62cb34d48ed8d1adaabe39424320b693bcce5a8db105829df/photon_ptm-0.2.4.tar.gz#sha256=72fcf8df33ccf1e27455387422d70883fd9cf1324fda3f1a46dc03b1de51c032 (from https://pypi.org/simple/photon-ptm/), version: 0.2.4
2020-09-20T15:13:51,412   Found link https://files.pythonhosted.org/packages/e0/e3/46802b8d193bc76c0a68a536dfe6f425aa64f67b10db79afbb6fab2fc5de/photon_ptm-0.2.5.tar.gz#sha256=7fd86dc30aa20be8d27ef3f9ce66fc8281c0c2b83d206fa892049df298ab92c3 (from https://pypi.org/simple/photon-ptm/), version: 0.2.5
2020-09-20T15:13:51,413   Found link https://files.pythonhosted.org/packages/a6/5c/c35cc366b3437cbf2578889f3fff385d926e7196606a18535835f91ada4a/photon_ptm-0.2.6.tar.gz#sha256=73faafd3e570605545c99a75b1d49a44d915e1442cce20e4a64d38a1e4272b0c (from https://pypi.org/simple/photon-ptm/), version: 0.2.6
2020-09-20T15:13:51,413   Found link https://files.pythonhosted.org/packages/8f/bf/d4bf8497043a39986f7d6b0a7cf58eb0b2402461a1dd70c093a1567bd156/photon_ptm-0.2.7.tar.gz#sha256=09d0790935994fb0da58735ef8cc6b3e71bf67ca019fd0fbf15f21bd9c547eca (from https://pypi.org/simple/photon-ptm/), version: 0.2.7
2020-09-20T15:13:51,414   Found link https://files.pythonhosted.org/packages/49/0b/68bed752a43fd97769e76617c976556b5678dba1a5483d543f3fba148ea1/photon_ptm-0.2.8.tar.gz#sha256=d0cf56ec8204921271db32b1191ca8aa83b231a36d31e6b93705a012a70c27f9 (from https://pypi.org/simple/photon-ptm/), version: 0.2.8
2020-09-20T15:13:51,415   Found link https://files.pythonhosted.org/packages/d3/d1/4ca6e77f2a70985409e46a11321fa3474240d520c64f2dc1fcf09dbab43c/photon_ptm-0.3.0.tar.gz#sha256=df96edc71350622ee5316da2da28e1832a4a8ed2cf03df4860ceaa9f4539fba3 (from https://pypi.org/simple/photon-ptm/), version: 0.3.0
2020-09-20T15:13:51,416   Found link https://files.pythonhosted.org/packages/10/d9/90af00c6f6982471ede984cdead4e7083a2e803dbc4ccecd7cd8703a5175/photon_ptm-0.3.1.tar.gz#sha256=ffbe2381bb1f84a52e6fa82a0cc0afce181ab93c28e4fc587080f4b1a60b0f13 (from https://pypi.org/simple/photon-ptm/), version: 0.3.1
2020-09-20T15:13:51,430 Given no hashes to check 1 links for project 'photon-ptm': discarding no candidates
2020-09-20T15:13:51,431 Using version 0.2.2 (newest of versions: 0.2.2)
2020-09-20T15:13:51,440 Collecting photon-ptm==0.2.2
2020-09-20T15:13:51,445   Created temporary directory: /tmp/pip-unpack-su6tvhh6
2020-09-20T15:13:51,536   Downloading photon_ptm-0.2.2.tar.gz (21 kB)
2020-09-20T15:13:51,727   Added photon-ptm==0.2.2 from https://files.pythonhosted.org/packages/e5/9a/ed5a90fc79a4f1e6605715b1fbc14e245f7e616156e767e4fb23f24bcaf1/photon_ptm-0.2.2.tar.gz#sha256=1499710d5b85aacf0e9618a78de253c6836e3baa1714d5c90618b5111da9894f to build tracker '/tmp/pip-req-tracker-3j71fpoc'
2020-09-20T15:13:51,731     Running setup.py (path:/tmp/pip-wheel-xwrg9_7z/photon-ptm/setup.py) egg_info for package photon-ptm
2020-09-20T15:13:51,733     Created temporary directory: /tmp/pip-pip-egg-info-g7xmvsc7
2020-09-20T15:13:51,734     Running command python setup.py egg_info
2020-09-20T15:13:54,290     running egg_info
2020-09-20T15:13:54,296     creating /tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info
2020-09-20T15:13:54,298     writing /tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info/PKG-INFO
2020-09-20T15:13:54,305     writing top-level names to /tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info/top_level.txt
2020-09-20T15:13:54,309     writing dependency_links to /tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info/dependency_links.txt
2020-09-20T15:13:54,311     writing requirements to /tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info/requires.txt
2020-09-20T15:13:54,315     writing manifest file '/tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info/SOURCES.txt'
2020-09-20T15:13:54,676     reading manifest file '/tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info/SOURCES.txt'
2020-09-20T15:13:54,679     reading manifest template 'MANIFEST.in'
2020-09-20T15:13:54,687     writing manifest file '/tmp/pip-pip-egg-info-g7xmvsc7/photon_ptm.egg-info/SOURCES.txt'
2020-09-20T15:13:54,830   Source in /tmp/pip-wheel-xwrg9_7z/photon-ptm has version 0.2.2, which satisfies requirement photon-ptm==0.2.2 from https://files.pythonhosted.org/packages/e5/9a/ed5a90fc79a4f1e6605715b1fbc14e245f7e616156e767e4fb23f24bcaf1/photon_ptm-0.2.2.tar.gz#sha256=1499710d5b85aacf0e9618a78de253c6836e3baa1714d5c90618b5111da9894f
2020-09-20T15:13:54,832   Removed photon-ptm==0.2.2 from https://files.pythonhosted.org/packages/e5/9a/ed5a90fc79a4f1e6605715b1fbc14e245f7e616156e767e4fb23f24bcaf1/photon_ptm-0.2.2.tar.gz#sha256=1499710d5b85aacf0e9618a78de253c6836e3baa1714d5c90618b5111da9894f from build tracker '/tmp/pip-req-tracker-3j71fpoc'
2020-09-20T15:13:54,838 Building wheels for collected packages: photon-ptm
2020-09-20T15:13:54,846   Created temporary directory: /tmp/pip-wheel-jnctqepx
2020-09-20T15:13:54,847   Building wheel for photon-ptm (setup.py): started
2020-09-20T15:13:54,848   Destination directory: /tmp/pip-wheel-jnctqepx
2020-09-20T15:13:54,849   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-xwrg9_7z/photon-ptm/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-xwrg9_7z/photon-ptm/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-jnctqepx
2020-09-20T15:13:57,222   running bdist_wheel
2020-09-20T15:13:57,237   running build
2020-09-20T15:13:57,238   running build_py
2020-09-20T15:13:57,576   creating build
2020-09-20T15:13:57,577   creating build/lib
2020-09-20T15:13:57,579   creating build/lib/phos
2020-09-20T15:13:57,581   copying phos/version.py -> build/lib/phos
2020-09-20T15:13:57,585   copying phos/__init__.py -> build/lib/phos
2020-09-20T15:13:57,590   copying phos/defaults.py -> build/lib/phos
2020-09-20T15:13:57,595   copying phos/pipeline.py -> build/lib/phos
2020-09-20T15:13:57,601   copying phos/app.py -> build/lib/phos
2020-09-20T15:13:57,610   creating build/lib/phos/data
2020-09-20T15:13:57,613   copying phos/data/functional_sites.py -> build/lib/phos/data
2020-09-20T15:13:57,619   copying phos/data/__init__.py -> build/lib/phos/data
2020-09-20T15:13:57,625   copying phos/data/silac.py -> build/lib/phos/data
2020-09-20T15:13:57,631   copying phos/data/network.py -> build/lib/phos/data
2020-09-20T15:13:57,637   copying phos/data/read.py -> build/lib/phos/data
2020-09-20T15:13:57,645   creating build/lib/phos/algo
2020-09-20T15:13:57,648   copying phos/algo/functional_sites.py -> build/lib/phos/algo
2020-09-20T15:13:57,654   copying phos/algo/__init__.py -> build/lib/phos/algo
2020-09-20T15:13:57,658   copying phos/algo/activity.py -> build/lib/phos/algo
2020-09-20T15:13:57,662   copying phos/algo/anat.py -> build/lib/phos/algo
2020-09-20T15:13:57,668   copying phos/algo/logistic_regression.py -> build/lib/phos/algo
2020-09-20T15:13:57,672   copying phos/algo/subnetwork.py -> build/lib/phos/algo
2020-09-20T15:13:57,680   creating build/lib/phos/util
2020-09-20T15:13:57,683   copying phos/util/io.py -> build/lib/phos/util
2020-09-20T15:13:57,689   copying phos/util/__init__.py -> build/lib/phos/util
2020-09-20T15:13:57,695   copying phos/util/mapping.py -> build/lib/phos/util
2020-09-20T15:13:57,719   installing to build/bdist.linux-armv7l/wheel
2020-09-20T15:13:57,719   running install
2020-09-20T15:13:57,721   running install_lib
2020-09-20T15:13:57,728   creating build/bdist.linux-armv7l
2020-09-20T15:13:57,729   creating build/bdist.linux-armv7l/wheel
2020-09-20T15:13:57,733   creating build/bdist.linux-armv7l/wheel/phos
2020-09-20T15:13:57,736   creating build/bdist.linux-armv7l/wheel/phos/data
2020-09-20T15:13:57,739   copying build/lib/phos/data/functional_sites.py -> build/bdist.linux-armv7l/wheel/phos/data
2020-09-20T15:13:57,744   copying build/lib/phos/data/__init__.py -> build/bdist.linux-armv7l/wheel/phos/data
2020-09-20T15:13:57,748   copying build/lib/phos/data/silac.py -> build/bdist.linux-armv7l/wheel/phos/data
2020-09-20T15:13:57,752   copying build/lib/phos/data/network.py -> build/bdist.linux-armv7l/wheel/phos/data
2020-09-20T15:13:57,756   copying build/lib/phos/data/read.py -> build/bdist.linux-armv7l/wheel/phos/data
2020-09-20T15:13:57,762   copying build/lib/phos/version.py -> build/bdist.linux-armv7l/wheel/phos
2020-09-20T15:13:57,767   copying build/lib/phos/__init__.py -> build/bdist.linux-armv7l/wheel/phos
2020-09-20T15:13:57,772   copying build/lib/phos/defaults.py -> build/bdist.linux-armv7l/wheel/phos
2020-09-20T15:13:57,780   creating build/bdist.linux-armv7l/wheel/phos/algo
2020-09-20T15:13:57,782   copying build/lib/phos/algo/functional_sites.py -> build/bdist.linux-armv7l/wheel/phos/algo
2020-09-20T15:13:57,788   copying build/lib/phos/algo/__init__.py -> build/bdist.linux-armv7l/wheel/phos/algo
2020-09-20T15:13:57,793   copying build/lib/phos/algo/activity.py -> build/bdist.linux-armv7l/wheel/phos/algo
2020-09-20T15:13:57,799   copying build/lib/phos/algo/anat.py -> build/bdist.linux-armv7l/wheel/phos/algo
2020-09-20T15:13:57,805   copying build/lib/phos/algo/logistic_regression.py -> build/bdist.linux-armv7l/wheel/phos/algo
2020-09-20T15:13:57,811   copying build/lib/phos/algo/subnetwork.py -> build/bdist.linux-armv7l/wheel/phos/algo
2020-09-20T15:13:57,819   creating build/bdist.linux-armv7l/wheel/phos/util
2020-09-20T15:13:57,821   copying build/lib/phos/util/io.py -> build/bdist.linux-armv7l/wheel/phos/util
2020-09-20T15:13:57,827   copying build/lib/phos/util/__init__.py -> build/bdist.linux-armv7l/wheel/phos/util
2020-09-20T15:13:57,833   copying build/lib/phos/util/mapping.py -> build/bdist.linux-armv7l/wheel/phos/util
2020-09-20T15:13:57,838   copying build/lib/phos/pipeline.py -> build/bdist.linux-armv7l/wheel/phos
2020-09-20T15:13:57,845   copying build/lib/phos/app.py -> build/bdist.linux-armv7l/wheel/phos
2020-09-20T15:13:57,850   running install_egg_info
2020-09-20T15:13:57,896   running egg_info
2020-09-20T15:13:57,898   writing requirements to photon_ptm.egg-info/requires.txt
2020-09-20T15:13:57,901   writing dependency_links to photon_ptm.egg-info/dependency_links.txt
2020-09-20T15:13:57,904   writing top-level names to photon_ptm.egg-info/top_level.txt
2020-09-20T15:13:57,906   writing photon_ptm.egg-info/PKG-INFO
2020-09-20T15:13:57,922   reading manifest file 'photon_ptm.egg-info/SOURCES.txt'
2020-09-20T15:13:57,926   reading manifest template 'MANIFEST.in'
2020-09-20T15:13:57,934   writing manifest file 'photon_ptm.egg-info/SOURCES.txt'
2020-09-20T15:13:57,937   Copying photon_ptm.egg-info to build/bdist.linux-armv7l/wheel/photon_ptm-0.2.2-py3.5.egg-info
2020-09-20T15:13:57,964   running install_scripts
2020-09-20T15:13:58,171   creating build/bdist.linux-armv7l/wheel/photon_ptm-0.2.2.dist-info/WHEEL
2020-09-20T15:13:58,461   Building wheel for photon-ptm (setup.py): finished with status 'done'
2020-09-20T15:13:58,465   Created wheel for photon-ptm: filename=photon_ptm-0.2.2-py3-none-any.whl size=28333 sha256=db6d8c73c3060418635823e50b7efc6cd6238e39e4b37a7f7e068acbe826023d
2020-09-20T15:13:58,466   Stored in directory: /tmp/pip-ephem-wheel-cache-k8uvliki/wheels/01/33/7f/f8cc99f564a5136c974687d13159b5756efdf3a54f6f5a0123
2020-09-20T15:13:58,470 Successfully built photon-ptm
2020-09-20T15:13:58,482 Removed build tracker: '/tmp/pip-req-tracker-3j71fpoc'