2020-09-20T16:15:16,250 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2020-09-20T16:15:16,999 Created temporary directory: /tmp/pip-ephem-wheel-cache-7otuydxk 2020-09-20T16:15:17,004 Created temporary directory: /tmp/pip-req-tracker-8oynai_q 2020-09-20T16:15:17,005 Initialized build tracking at /tmp/pip-req-tracker-8oynai_q 2020-09-20T16:15:17,005 Created build tracker: /tmp/pip-req-tracker-8oynai_q 2020-09-20T16:15:17,006 Entered build tracker: /tmp/pip-req-tracker-8oynai_q 2020-09-20T16:15:17,007 Created temporary directory: /tmp/pip-wheel-efymjkls 2020-09-20T16:15:17,023 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com 2020-09-20T16:15:17,025 2 location(s) to search for versions of pybel: 2020-09-20T16:15:17,025 * https://pypi.org/simple/pybel/ 2020-09-20T16:15:17,025 * https://pypi.ngc.nvidia.com/pybel/ 2020-09-20T16:15:17,026 Fetching project page and 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https://files.pythonhosted.org/packages/36/71/83124123a048b65e05b5640f993cf242ed726bb30d9f7f02f812e68ddbd3/pybel-0.14.0.tar.gz#sha256=85da4bc8db77f2fdfc322d2e9164d0334f68afa96c2596ba13cc3b5a5c632c5e (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.0 2020-09-20T16:15:17,629 Found link https://files.pythonhosted.org/packages/e9/0e/a7f15ed8c8b075f6320c3fe36787c3513e94bbbfc6e05a251db5c480641a/pybel-0.14.1-py3-none-any.whl#sha256=518d091cae1e7ae8ea72aedb328c9dced772ee08a3e5f586c8b1600aa55e7019 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.1 2020-09-20T16:15:17,631 Found link https://files.pythonhosted.org/packages/95/7c/e3769712d5d31fb85eadda8585c12f25ad62b25ff6b96ab1c44d8c0e4957/pybel-0.14.1.tar.gz#sha256=b3cddf554d5e94835d20b88fc419a2026cc680d0de04933577dbdbe74e7136d8 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.1 2020-09-20T16:15:17,633 Found link https://files.pythonhosted.org/packages/35/b2/1a4625e7e590948b2d3302eedf7d833e6f07377010da6b879954049cb6b2/pybel-0.14.2-py3-none-any.whl#sha256=3c9521db9ba5f0166bf0589d194f84ccaa383542a12256fa75bed27ca6de72af (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.2 2020-09-20T16:15:17,635 Found link https://files.pythonhosted.org/packages/7f/68/404dd8290f1bca9a3d6e1f886263d0461fbba25e067b861d167f5119e8fa/pybel-0.14.2.tar.gz#sha256=82d52a9f0b3f1a7ce63e2b208b7fab0ef79aa015baf2d7229896580d499b35de (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.2 2020-09-20T16:15:17,637 Found link https://files.pythonhosted.org/packages/98/cc/f2c7002d4c5866abc4743340160aa36220bad53137c4cda6b000c24823e6/pybel-0.14.3-py3-none-any.whl#sha256=7175454b3d84aeebd28919d697b652297537b0985a71a5a02890e596405c78c1 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.3 2020-09-20T16:15:17,639 Found link https://files.pythonhosted.org/packages/4e/96/5724c3292bd73bdc7ead9969f3b8c8ed64eb2e22445330134e8a9bd1a7bf/pybel-0.14.3.tar.gz#sha256=ac3abffbb08b1b6ae41804a95e368a08623e900eafafa7bbf573a42fa1ced7a7 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.3 2020-09-20T16:15:17,641 Found link https://files.pythonhosted.org/packages/93/36/4ab480a768c62496952f8b3f90a98ef6116daf4960ae2d3ddd4403d2ec08/pybel-0.14.4-py3-none-any.whl#sha256=c6bc50b40c289fbfb283a12e2d739b3586b5f1d0c80b2ed3553326f43320dad6 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.4 2020-09-20T16:15:17,642 Found link https://files.pythonhosted.org/packages/7f/53/5b7085c497e8d6834dca0febe2ca095bfa351e88cbb6d78451c9c55a33d3/pybel-0.14.4.tar.gz#sha256=b77b3445328fb2d1ceb3578c948e6be25d49158c64e801dce1fd7445760694b0 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.4 2020-09-20T16:15:17,644 Found link https://files.pythonhosted.org/packages/41/ea/ac7235ea4e9dc757e5713e3d176758532c44bba9d5da237517b2401b11cb/pybel-0.14.5-py3-none-any.whl#sha256=4baa69a3e44217f0c7fdb1c3d9307ccba6027b7f3f4dfb4a152731e9865b4d2d (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.5 2020-09-20T16:15:17,646 Found link https://files.pythonhosted.org/packages/24/cc/74fc9c23de564cbccc038aa90d4e68c9040ee497a4f2ad2664dd66336f66/pybel-0.14.5.tar.gz#sha256=deb77bf32cae3a919a9c157635804bdef2c42cbb0e0883dd015b05d0ce3149a1 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.5 2020-09-20T16:15:17,648 Found link https://files.pythonhosted.org/packages/79/3e/781d44a604c6e062c28a767fe7b62bf478f6ca24d4af991de3ec3e8def2e/pybel-0.14.6-py3-none-any.whl#sha256=cdb264e90aba045f4ec4ba0dab4d3a4aaea0caf51cda3c6fc596853717468070 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.6 2020-09-20T16:15:17,650 Found link https://files.pythonhosted.org/packages/8b/69/4615da1ecd37bffd6bca6f0791e859b29e00010da725d7c67a29ca10b31d/pybel-0.14.6.tar.gz#sha256=73e41f4bec440233a76e37304fde196c83b5f23fb910c9de38337914233aa869 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.6 2020-09-20T16:15:17,652 Found link https://files.pythonhosted.org/packages/82/ff/44e9d578b6bf1b04ab8e0dfba410a4c40e2a771c704db0798cdd6a12cb0e/pybel-0.14.7-py3-none-any.whl#sha256=89a27adbdf292742fce4ee2dce5f36c1a71db0c7ad0745d040d9acd26f344992 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.7 2020-09-20T16:15:17,654 Found link https://files.pythonhosted.org/packages/9c/57/71ce92c8a7e138669f0b98694d279352665048c4191ae7e49ad95b6898cd/pybel-0.14.7.tar.gz#sha256=390109dc141f3498a9e97ea2e9525845caab65c6df9e8c79a0542cec2352feb1 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.7 2020-09-20T16:15:17,656 Found link https://files.pythonhosted.org/packages/9b/36/f4a51624d302a2da8b1468434ea226293bde042cf556d8ceb93ed337cd10/pybel-0.14.8-py3-none-any.whl#sha256=4fa04fba17356801469105393217a10b25901384a652697f0c88a7550497ac52 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.8 2020-09-20T16:15:17,658 Found link https://files.pythonhosted.org/packages/48/10/6d98e6204b6f3dd712b7e27b69bffeeea3fb18c371fb6e78a4985d44e2bb/pybel-0.14.8.tar.gz#sha256=d35df841b1497416bcf0d4fd91622be66f029e35270107bca5a0e44d38620bdd (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.8 2020-09-20T16:15:17,660 Found link https://files.pythonhosted.org/packages/67/0f/1e84d1c37e1c5e09b465731d63029801c790a172bcd95202eb1da14a6c5c/pybel-0.14.9-py3-none-any.whl#sha256=d1ea8a5c9f26d65f3e3472dff732112b722e6149ed9d95a8119182a4973eb966 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.9 2020-09-20T16:15:17,661 Found link https://files.pythonhosted.org/packages/78/d6/c8ce8e7937f138ea59e3c7bfaf3e7f7fe613beaa908dfa105c7576d9b387/pybel-0.14.9.tar.gz#sha256=082a4480fd576d5287ffa84505eb80f5840daef84d9f764ace466eb0b49f3230 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.9 2020-09-20T16:15:17,663 Found link https://files.pythonhosted.org/packages/8b/bd/106a7178cb860d1a36bac3520c96f3c9509c8f22586fe1cd0a58605bff13/pybel-0.14.10-py3-none-any.whl#sha256=36cb32d5261077aae2573d3b1d05544174a69e16e5babf25f9d9514e5c41cd26 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.10 2020-09-20T16:15:17,665 Found link https://files.pythonhosted.org/packages/09/79/2051b18f36164aaace2cc09ea2ecfabe6cdaaac0003721ce4f297348023a/pybel-0.14.10.tar.gz#sha256=47992711ffea0fa7870d2be733a1a9248dfe2b3867ff2e616899bd0ffbc667b9 (from https://pypi.org/simple/pybel/) (requires-python:>=3.5), version: 0.14.10 2020-09-20T16:15:17,666 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/pybel/ 2020-09-20T16:15:17,667 Getting page https://pypi.ngc.nvidia.com/pybel/ 2020-09-20T16:15:17,670 Found index url https://pypi.ngc.nvidia.com 2020-09-20T16:15:18,363 Could not fetch URL https://pypi.ngc.nvidia.com/pybel/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/pybel/ - skipping 2020-09-20T16:15:18,436 Given no hashes to check 1 links for project 'pybel': discarding no candidates 2020-09-20T16:15:18,441 Using version 0.11.1 (newest of versions: 0.11.1) 2020-09-20T16:15:18,451 Collecting pybel==0.11.1 2020-09-20T16:15:18,457 Created temporary directory: /tmp/pip-unpack-efprdtwq 2020-09-20T16:15:18,558 Downloading PyBEL-0.11.1.tar.gz (420 kB) 2020-09-20T16:15:20,233 Added pybel==0.11.1 from https://files.pythonhosted.org/packages/57/ff/160e1a9dee998a14a5d7451ab848514d59cf65d2c23586aef3c1042c7062/PyBEL-0.11.1.tar.gz#sha256=9b37bc3be859dba93713403cb55159189f6e2b76d8750e37cef67157fea94654 to build tracker '/tmp/pip-req-tracker-8oynai_q' 2020-09-20T16:15:20,235 Running setup.py (path:/tmp/pip-wheel-efymjkls/pybel/setup.py) egg_info for package pybel 2020-09-20T16:15:20,236 Created temporary directory: /tmp/pip-pip-egg-info-6jef_5ww 2020-09-20T16:15:20,237 Running command python setup.py egg_info 2020-09-20T16:15:22,755 running egg_info 2020-09-20T16:15:22,760 creating /tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info 2020-09-20T16:15:22,762 writing dependency_links to /tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/dependency_links.txt 2020-09-20T16:15:22,766 writing requirements to /tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/requires.txt 2020-09-20T16:15:22,769 writing top-level names to /tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/top_level.txt 2020-09-20T16:15:22,771 writing entry points to /tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/entry_points.txt 2020-09-20T16:15:22,773 writing /tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/PKG-INFO 2020-09-20T16:15:22,781 writing manifest file '/tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/SOURCES.txt' 2020-09-20T16:15:23,157 reading manifest file '/tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/SOURCES.txt' 2020-09-20T16:15:23,160 reading manifest template 'MANIFEST.in' 2020-09-20T16:15:23,195 no previously-included directories found matching 'scripts' 2020-09-20T16:15:23,280 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2020-09-20T16:15:23,285 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2020-09-20T16:15:23,291 warning: no previously-included files matching '*.so' found anywhere in distribution 2020-09-20T16:15:23,294 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2020-09-20T16:15:23,297 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2020-09-20T16:15:23,300 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2020-09-20T16:15:23,302 warning: no previously-included files found matching '.bumpversion.cfg' 2020-09-20T16:15:23,333 writing manifest file '/tmp/pip-pip-egg-info-6jef_5ww/PyBEL.egg-info/SOURCES.txt' 2020-09-20T16:15:23,478 Source in /tmp/pip-wheel-efymjkls/pybel has version 0.11.1, which satisfies requirement pybel==0.11.1 from https://files.pythonhosted.org/packages/57/ff/160e1a9dee998a14a5d7451ab848514d59cf65d2c23586aef3c1042c7062/PyBEL-0.11.1.tar.gz#sha256=9b37bc3be859dba93713403cb55159189f6e2b76d8750e37cef67157fea94654 2020-09-20T16:15:23,480 Removed pybel==0.11.1 from https://files.pythonhosted.org/packages/57/ff/160e1a9dee998a14a5d7451ab848514d59cf65d2c23586aef3c1042c7062/PyBEL-0.11.1.tar.gz#sha256=9b37bc3be859dba93713403cb55159189f6e2b76d8750e37cef67157fea94654 from build tracker '/tmp/pip-req-tracker-8oynai_q' 2020-09-20T16:15:23,487 Building wheels for collected packages: pybel 2020-09-20T16:15:23,496 Created temporary directory: /tmp/pip-wheel-edjstvf3 2020-09-20T16:15:23,497 Building wheel for pybel (setup.py): started 2020-09-20T16:15:23,498 Destination directory: /tmp/pip-wheel-edjstvf3 2020-09-20T16:15:23,498 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-efymjkls/pybel/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-efymjkls/pybel/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-edjstvf3 2020-09-20T16:15:25,950 running bdist_wheel 2020-09-20T16:15:25,966 running build 2020-09-20T16:15:25,967 running build_py 2020-09-20T16:15:26,308 creating build 2020-09-20T16:15:26,309 creating build/lib 2020-09-20T16:15:26,310 creating build/lib/pybel 2020-09-20T16:15:26,313 copying src/pybel/utils.py -> build/lib/pybel 2020-09-20T16:15:26,319 copying src/pybel/canonicalize.py -> build/lib/pybel 2020-09-20T16:15:26,326 copying src/pybel/cli.py -> build/lib/pybel 2020-09-20T16:15:26,332 copying src/pybel/__main__.py -> build/lib/pybel 2020-09-20T16:15:26,336 copying src/pybel/tokens.py -> build/lib/pybel 2020-09-20T16:15:26,344 copying src/pybel/language.py -> build/lib/pybel 2020-09-20T16:15:26,351 copying src/pybel/exceptions.py -> build/lib/pybel 2020-09-20T16:15:26,357 copying src/pybel/constants.py -> build/lib/pybel 2020-09-20T16:15:26,364 copying src/pybel/__init__.py -> build/lib/pybel 2020-09-20T16:15:26,369 copying src/pybel/exthook.py -> build/lib/pybel 2020-09-20T16:15:26,375 creating build/lib/pybel/io 2020-09-20T16:15:26,377 copying src/pybel/io/utils.py -> build/lib/pybel/io 2020-09-20T16:15:26,382 copying src/pybel/io/indra.py -> build/lib/pybel/io 2020-09-20T16:15:26,386 copying src/pybel/io/lines.py -> build/lib/pybel/io 2020-09-20T16:15:26,391 copying src/pybel/io/jgif.py -> build/lib/pybel/io 2020-09-20T16:15:26,396 copying src/pybel/io/neo4j.py -> build/lib/pybel/io 2020-09-20T16:15:26,402 copying src/pybel/io/gpickle.py -> build/lib/pybel/io 2020-09-20T16:15:26,408 copying src/pybel/io/ndex_utils.py -> build/lib/pybel/io 2020-09-20T16:15:26,414 copying src/pybel/io/line_utils.py -> build/lib/pybel/io 2020-09-20T16:15:26,420 copying src/pybel/io/nodelink.py -> build/lib/pybel/io 2020-09-20T16:15:26,425 copying src/pybel/io/exc.py -> build/lib/pybel/io 2020-09-20T16:15:26,429 copying src/pybel/io/__init__.py -> build/lib/pybel/io 2020-09-20T16:15:26,433 copying src/pybel/io/cx.py -> build/lib/pybel/io 2020-09-20T16:15:26,439 copying src/pybel/io/extras.py -> build/lib/pybel/io 2020-09-20T16:15:26,444 copying src/pybel/io/web.py -> build/lib/pybel/io 2020-09-20T16:15:26,450 creating build/lib/pybel/resources 2020-09-20T16:15:26,452 copying src/pybel/resources/utils.py -> build/lib/pybel/resources 2020-09-20T16:15:26,457 copying src/pybel/resources/document.py -> build/lib/pybel/resources 2020-09-20T16:15:26,464 copying src/pybel/resources/constants.py -> build/lib/pybel/resources 2020-09-20T16:15:26,470 copying src/pybel/resources/exc.py -> build/lib/pybel/resources 2020-09-20T16:15:26,476 copying src/pybel/resources/arty.py -> build/lib/pybel/resources 2020-09-20T16:15:26,482 copying src/pybel/resources/__init__.py -> build/lib/pybel/resources 2020-09-20T16:15:26,487 copying src/pybel/resources/deploy.py -> build/lib/pybel/resources 2020-09-20T16:15:26,492 copying src/pybel/resources/defaults.py -> build/lib/pybel/resources 2020-09-20T16:15:26,498 creating build/lib/pybel/parser 2020-09-20T16:15:26,500 copying src/pybel/parser/utils.py -> build/lib/pybel/parser 2020-09-20T16:15:26,505 copying src/pybel/parser/parse_control.py -> build/lib/pybel/parser 2020-09-20T16:15:26,511 copying src/pybel/parser/parse_identifier.py -> build/lib/pybel/parser 2020-09-20T16:15:26,516 copying src/pybel/parser/baseparser.py -> build/lib/pybel/parser 2020-09-20T16:15:26,520 copying src/pybel/parser/parse_metadata.py -> build/lib/pybel/parser 2020-09-20T16:15:26,527 copying src/pybel/parser/exc.py -> build/lib/pybel/parser 2020-09-20T16:15:26,535 copying src/pybel/parser/__init__.py -> build/lib/pybel/parser 2020-09-20T16:15:26,540 copying src/pybel/parser/parse_bel.py -> build/lib/pybel/parser 2020-09-20T16:15:26,550 creating build/lib/pybel/struct 2020-09-20T16:15:26,552 copying src/pybel/struct/utils.py -> build/lib/pybel/struct 2020-09-20T16:15:26,557 copying src/pybel/struct/graph.py -> build/lib/pybel/struct 2020-09-20T16:15:26,565 copying src/pybel/struct/operations.py -> build/lib/pybel/struct 2020-09-20T16:15:26,570 copying src/pybel/struct/__init__.py -> build/lib/pybel/struct 2020-09-20T16:15:26,576 creating build/lib/pybel/manager 2020-09-20T16:15:26,578 copying src/pybel/manager/utils.py -> build/lib/pybel/manager 2020-09-20T16:15:26,583 copying src/pybel/manager/base_manager.py -> build/lib/pybel/manager 2020-09-20T16:15:26,588 copying src/pybel/manager/database_io.py -> build/lib/pybel/manager 2020-09-20T16:15:26,592 copying src/pybel/manager/query_manager.py -> build/lib/pybel/manager 2020-09-20T16:15:26,598 copying src/pybel/manager/exc.py -> build/lib/pybel/manager 2020-09-20T16:15:26,602 copying src/pybel/manager/make_json_serializable.py -> build/lib/pybel/manager 2020-09-20T16:15:26,606 copying src/pybel/manager/__init__.py -> build/lib/pybel/manager 2020-09-20T16:15:26,610 copying src/pybel/manager/lookup_manager.py -> build/lib/pybel/manager 2020-09-20T16:15:26,614 copying src/pybel/manager/cache_manager.py -> build/lib/pybel/manager 2020-09-20T16:15:26,625 copying src/pybel/manager/models.py -> build/lib/pybel/manager 2020-09-20T16:15:26,632 copying src/pybel/manager/defaults.py -> build/lib/pybel/manager 2020-09-20T16:15:26,637 copying src/pybel/manager/citation_utils.py -> build/lib/pybel/manager 2020-09-20T16:15:26,644 creating build/lib/pybel/dsl 2020-09-20T16:15:26,646 copying src/pybel/dsl/utils.py -> build/lib/pybel/dsl 2020-09-20T16:15:26,651 copying src/pybel/dsl/nodes.py -> build/lib/pybel/dsl 2020-09-20T16:15:26,657 copying src/pybel/dsl/exc.py -> build/lib/pybel/dsl 2020-09-20T16:15:26,661 copying src/pybel/dsl/__init__.py -> build/lib/pybel/dsl 2020-09-20T16:15:26,666 copying src/pybel/dsl/namespaces.py -> build/lib/pybel/dsl 2020-09-20T16:15:26,670 copying src/pybel/dsl/edges.py -> build/lib/pybel/dsl 2020-09-20T16:15:26,676 creating build/lib/pybel/examples 2020-09-20T16:15:26,678 copying src/pybel/examples/braf_example.py -> build/lib/pybel/examples 2020-09-20T16:15:26,682 copying src/pybel/examples/statin_example.py -> build/lib/pybel/examples 2020-09-20T16:15:26,687 copying src/pybel/examples/egf_example.py -> build/lib/pybel/examples 2020-09-20T16:15:26,692 copying src/pybel/examples/homology_example.py -> build/lib/pybel/examples 2020-09-20T16:15:26,697 copying src/pybel/examples/__init__.py -> build/lib/pybel/examples 2020-09-20T16:15:26,701 copying src/pybel/examples/sialic_acid_example.py -> build/lib/pybel/examples 2020-09-20T16:15:26,707 creating build/lib/pybel/ext 2020-09-20T16:15:26,709 copying src/pybel/ext/__init__.py -> build/lib/pybel/ext 2020-09-20T16:15:26,715 creating build/lib/pybel/resources/definitions 2020-09-20T16:15:26,717 copying src/pybel/resources/definitions/definitions.py -> build/lib/pybel/resources/definitions 2020-09-20T16:15:26,722 copying src/pybel/resources/definitions/annotation.py -> build/lib/pybel/resources/definitions 2020-09-20T16:15:26,727 copying src/pybel/resources/definitions/__init__.py -> build/lib/pybel/resources/definitions 2020-09-20T16:15:26,731 copying src/pybel/resources/definitions/write_utils.py -> build/lib/pybel/resources/definitions 2020-09-20T16:15:26,736 copying src/pybel/resources/definitions/namespace.py -> build/lib/pybel/resources/definitions 2020-09-20T16:15:26,744 creating build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,746 copying src/pybel/parser/modifiers/fragment.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,752 copying src/pybel/parser/modifiers/constants.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,758 copying src/pybel/parser/modifiers/gene_modification.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,764 copying src/pybel/parser/modifiers/__init__.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,770 copying src/pybel/parser/modifiers/variant.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,774 copying src/pybel/parser/modifiers/fusion.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,779 copying src/pybel/parser/modifiers/gene_substitution.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,784 copying src/pybel/parser/modifiers/protein_modification.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,790 copying src/pybel/parser/modifiers/location.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,794 copying src/pybel/parser/modifiers/protein_substitution.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,798 copying src/pybel/parser/modifiers/truncation.py -> build/lib/pybel/parser/modifiers 2020-09-20T16:15:26,804 creating build/lib/pybel/struct/mutation 2020-09-20T16:15:26,806 copying src/pybel/struct/mutation/metadata.py -> build/lib/pybel/struct/mutation 2020-09-20T16:15:26,811 copying src/pybel/struct/mutation/__init__.py -> build/lib/pybel/struct/mutation 2020-09-20T16:15:26,815 copying src/pybel/struct/mutation/transfer.py -> build/lib/pybel/struct/mutation 2020-09-20T16:15:26,821 creating build/lib/pybel/struct/filters 2020-09-20T16:15:26,823 copying src/pybel/struct/filters/utils.py -> build/lib/pybel/struct/filters 2020-09-20T16:15:26,828 copying src/pybel/struct/filters/node_predicates.py -> build/lib/pybel/struct/filters 2020-09-20T16:15:26,836 copying src/pybel/struct/filters/node_filters.py -> build/lib/pybel/struct/filters 2020-09-20T16:15:26,843 copying src/pybel/struct/filters/edge_predicates.py -> build/lib/pybel/struct/filters 2020-09-20T16:15:26,849 copying src/pybel/struct/filters/edge_predicate_builders.py -> build/lib/pybel/struct/filters 2020-09-20T16:15:26,854 copying src/pybel/struct/filters/edge_filters.py -> build/lib/pybel/struct/filters 2020-09-20T16:15:26,859 copying src/pybel/struct/filters/__init__.py -> build/lib/pybel/struct/filters 2020-09-20T16:15:26,864 creating build/lib/pybel/struct/summary 2020-09-20T16:15:26,867 copying src/pybel/struct/summary/errors.py -> build/lib/pybel/struct/summary 2020-09-20T16:15:26,871 copying src/pybel/struct/summary/provenance.py -> build/lib/pybel/struct/summary 2020-09-20T16:15:26,875 copying src/pybel/struct/summary/__init__.py -> build/lib/pybel/struct/summary 2020-09-20T16:15:26,880 copying src/pybel/struct/summary/edge_summary.py -> build/lib/pybel/struct/summary 2020-09-20T16:15:26,884 copying src/pybel/struct/summary/node_summary.py -> build/lib/pybel/struct/summary 2020-09-20T16:15:26,922 installing to build/bdist.linux-armv7l/wheel 2020-09-20T16:15:26,922 running install 2020-09-20T16:15:26,924 running install_lib 2020-09-20T16:15:26,934 creating build/bdist.linux-armv7l 2020-09-20T16:15:26,935 creating build/bdist.linux-armv7l/wheel 2020-09-20T16:15:26,939 creating build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:26,941 copying build/lib/pybel/utils.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:26,948 creating build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,950 copying build/lib/pybel/io/utils.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,955 copying build/lib/pybel/io/indra.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,960 copying build/lib/pybel/io/lines.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,966 copying build/lib/pybel/io/jgif.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,973 copying build/lib/pybel/io/neo4j.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,979 copying build/lib/pybel/io/gpickle.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,983 copying build/lib/pybel/io/ndex_utils.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,988 copying build/lib/pybel/io/line_utils.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,993 copying build/lib/pybel/io/nodelink.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:26,997 copying build/lib/pybel/io/exc.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:27,003 copying build/lib/pybel/io/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:27,008 copying build/lib/pybel/io/cx.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:27,016 copying build/lib/pybel/io/extras.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:27,021 copying build/lib/pybel/io/web.py -> build/bdist.linux-armv7l/wheel/pybel/io 2020-09-20T16:15:27,026 copying build/lib/pybel/canonicalize.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,031 copying build/lib/pybel/cli.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,039 creating build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,041 copying build/lib/pybel/resources/utils.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,045 copying build/lib/pybel/resources/document.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,052 creating build/bdist.linux-armv7l/wheel/pybel/resources/definitions 2020-09-20T16:15:27,054 copying build/lib/pybel/resources/definitions/definitions.py -> build/bdist.linux-armv7l/wheel/pybel/resources/definitions 2020-09-20T16:15:27,060 copying build/lib/pybel/resources/definitions/annotation.py -> build/bdist.linux-armv7l/wheel/pybel/resources/definitions 2020-09-20T16:15:27,066 copying build/lib/pybel/resources/definitions/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/resources/definitions 2020-09-20T16:15:27,072 copying build/lib/pybel/resources/definitions/write_utils.py -> build/bdist.linux-armv7l/wheel/pybel/resources/definitions 2020-09-20T16:15:27,078 copying build/lib/pybel/resources/definitions/namespace.py -> build/bdist.linux-armv7l/wheel/pybel/resources/definitions 2020-09-20T16:15:27,084 copying build/lib/pybel/resources/constants.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,089 copying build/lib/pybel/resources/exc.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,093 copying build/lib/pybel/resources/arty.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,098 copying build/lib/pybel/resources/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,103 copying build/lib/pybel/resources/deploy.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,110 copying build/lib/pybel/resources/defaults.py -> build/bdist.linux-armv7l/wheel/pybel/resources 2020-09-20T16:15:27,117 copying build/lib/pybel/__main__.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,123 copying build/lib/pybel/tokens.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,130 copying build/lib/pybel/language.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,138 creating build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,140 copying build/lib/pybel/parser/utils.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,148 copying build/lib/pybel/parser/parse_control.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,157 copying build/lib/pybel/parser/parse_identifier.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,166 creating build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,168 copying build/lib/pybel/parser/modifiers/fragment.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,175 copying build/lib/pybel/parser/modifiers/constants.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,180 copying build/lib/pybel/parser/modifiers/gene_modification.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,186 copying build/lib/pybel/parser/modifiers/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,192 copying build/lib/pybel/parser/modifiers/variant.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,197 copying build/lib/pybel/parser/modifiers/fusion.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,203 copying build/lib/pybel/parser/modifiers/gene_substitution.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,209 copying build/lib/pybel/parser/modifiers/protein_modification.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,216 copying build/lib/pybel/parser/modifiers/location.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,221 copying build/lib/pybel/parser/modifiers/protein_substitution.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,227 copying build/lib/pybel/parser/modifiers/truncation.py -> build/bdist.linux-armv7l/wheel/pybel/parser/modifiers 2020-09-20T16:15:27,233 copying build/lib/pybel/parser/baseparser.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,239 copying build/lib/pybel/parser/parse_metadata.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,247 copying build/lib/pybel/parser/exc.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,254 copying build/lib/pybel/parser/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,259 copying build/lib/pybel/parser/parse_bel.py -> build/bdist.linux-armv7l/wheel/pybel/parser 2020-09-20T16:15:27,269 copying build/lib/pybel/exceptions.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,275 copying build/lib/pybel/constants.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,284 creating build/bdist.linux-armv7l/wheel/pybel/struct 2020-09-20T16:15:27,289 creating build/bdist.linux-armv7l/wheel/pybel/struct/mutation 2020-09-20T16:15:27,292 copying build/lib/pybel/struct/mutation/metadata.py -> build/bdist.linux-armv7l/wheel/pybel/struct/mutation 2020-09-20T16:15:27,298 copying build/lib/pybel/struct/mutation/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/struct/mutation 2020-09-20T16:15:27,303 copying build/lib/pybel/struct/mutation/transfer.py -> build/bdist.linux-armv7l/wheel/pybel/struct/mutation 2020-09-20T16:15:27,309 copying build/lib/pybel/struct/utils.py -> build/bdist.linux-armv7l/wheel/pybel/struct 2020-09-20T16:15:27,317 creating build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,319 copying build/lib/pybel/struct/filters/utils.py -> build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,325 copying build/lib/pybel/struct/filters/node_predicates.py -> build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,333 copying build/lib/pybel/struct/filters/node_filters.py -> build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,339 copying build/lib/pybel/struct/filters/edge_predicates.py -> build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,347 copying build/lib/pybel/struct/filters/edge_predicate_builders.py -> build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,352 copying build/lib/pybel/struct/filters/edge_filters.py -> build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,359 copying build/lib/pybel/struct/filters/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/struct/filters 2020-09-20T16:15:27,365 copying build/lib/pybel/struct/graph.py -> build/bdist.linux-armv7l/wheel/pybel/struct 2020-09-20T16:15:27,373 copying build/lib/pybel/struct/operations.py -> build/bdist.linux-armv7l/wheel/pybel/struct 2020-09-20T16:15:27,382 creating build/bdist.linux-armv7l/wheel/pybel/struct/summary 2020-09-20T16:15:27,384 copying build/lib/pybel/struct/summary/errors.py -> build/bdist.linux-armv7l/wheel/pybel/struct/summary 2020-09-20T16:15:27,390 copying build/lib/pybel/struct/summary/provenance.py -> build/bdist.linux-armv7l/wheel/pybel/struct/summary 2020-09-20T16:15:27,396 copying build/lib/pybel/struct/summary/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/struct/summary 2020-09-20T16:15:27,401 copying build/lib/pybel/struct/summary/edge_summary.py -> build/bdist.linux-armv7l/wheel/pybel/struct/summary 2020-09-20T16:15:27,407 copying build/lib/pybel/struct/summary/node_summary.py -> build/bdist.linux-armv7l/wheel/pybel/struct/summary 2020-09-20T16:15:27,412 copying build/lib/pybel/struct/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/struct 2020-09-20T16:15:27,417 creating build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,419 copying build/lib/pybel/manager/utils.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,424 copying build/lib/pybel/manager/base_manager.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,430 copying build/lib/pybel/manager/database_io.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,435 copying build/lib/pybel/manager/query_manager.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,442 copying build/lib/pybel/manager/exc.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,448 copying build/lib/pybel/manager/make_json_serializable.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,455 copying build/lib/pybel/manager/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,462 copying build/lib/pybel/manager/lookup_manager.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,469 copying build/lib/pybel/manager/cache_manager.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,480 copying build/lib/pybel/manager/models.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,490 copying build/lib/pybel/manager/defaults.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,498 copying build/lib/pybel/manager/citation_utils.py -> build/bdist.linux-armv7l/wheel/pybel/manager 2020-09-20T16:15:27,507 copying build/lib/pybel/__init__.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,515 creating build/bdist.linux-armv7l/wheel/pybel/dsl 2020-09-20T16:15:27,517 copying build/lib/pybel/dsl/utils.py -> build/bdist.linux-armv7l/wheel/pybel/dsl 2020-09-20T16:15:27,523 copying build/lib/pybel/dsl/nodes.py -> build/bdist.linux-armv7l/wheel/pybel/dsl 2020-09-20T16:15:27,531 copying build/lib/pybel/dsl/exc.py -> build/bdist.linux-armv7l/wheel/pybel/dsl 2020-09-20T16:15:27,536 copying build/lib/pybel/dsl/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/dsl 2020-09-20T16:15:27,540 copying build/lib/pybel/dsl/namespaces.py -> build/bdist.linux-armv7l/wheel/pybel/dsl 2020-09-20T16:15:27,545 copying build/lib/pybel/dsl/edges.py -> build/bdist.linux-armv7l/wheel/pybel/dsl 2020-09-20T16:15:27,551 creating build/bdist.linux-armv7l/wheel/pybel/examples 2020-09-20T16:15:27,554 copying build/lib/pybel/examples/braf_example.py -> build/bdist.linux-armv7l/wheel/pybel/examples 2020-09-20T16:15:27,560 copying build/lib/pybel/examples/statin_example.py -> build/bdist.linux-armv7l/wheel/pybel/examples 2020-09-20T16:15:27,565 copying build/lib/pybel/examples/egf_example.py -> build/bdist.linux-armv7l/wheel/pybel/examples 2020-09-20T16:15:27,572 copying build/lib/pybel/examples/homology_example.py -> build/bdist.linux-armv7l/wheel/pybel/examples 2020-09-20T16:15:27,579 copying build/lib/pybel/examples/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/examples 2020-09-20T16:15:27,585 copying build/lib/pybel/examples/sialic_acid_example.py -> build/bdist.linux-armv7l/wheel/pybel/examples 2020-09-20T16:15:27,593 creating build/bdist.linux-armv7l/wheel/pybel/ext 2020-09-20T16:15:27,596 copying build/lib/pybel/ext/__init__.py -> build/bdist.linux-armv7l/wheel/pybel/ext 2020-09-20T16:15:27,602 copying build/lib/pybel/exthook.py -> build/bdist.linux-armv7l/wheel/pybel 2020-09-20T16:15:27,607 running install_egg_info 2020-09-20T16:15:27,656 running egg_info 2020-09-20T16:15:27,658 writing requirements to src/PyBEL.egg-info/requires.txt 2020-09-20T16:15:27,661 writing dependency_links to src/PyBEL.egg-info/dependency_links.txt 2020-09-20T16:15:27,663 writing top-level names to src/PyBEL.egg-info/top_level.txt 2020-09-20T16:15:27,666 writing src/PyBEL.egg-info/PKG-INFO 2020-09-20T16:15:27,673 writing entry points to src/PyBEL.egg-info/entry_points.txt 2020-09-20T16:15:27,714 reading manifest file 'src/PyBEL.egg-info/SOURCES.txt' 2020-09-20T16:15:27,749 reading manifest template 'MANIFEST.in' 2020-09-20T16:15:27,786 no previously-included directories found matching 'scripts' 2020-09-20T16:15:27,850 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2020-09-20T16:15:27,854 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2020-09-20T16:15:27,858 warning: no previously-included files matching '*.so' found anywhere in distribution 2020-09-20T16:15:27,862 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2020-09-20T16:15:27,865 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2020-09-20T16:15:27,870 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2020-09-20T16:15:27,872 warning: no previously-included files found matching '.bumpversion.cfg' 2020-09-20T16:15:27,913 writing manifest file 'src/PyBEL.egg-info/SOURCES.txt' 2020-09-20T16:15:27,917 Copying src/PyBEL.egg-info to build/bdist.linux-armv7l/wheel/PyBEL-0.11.1-py3.5.egg-info 2020-09-20T16:15:27,951 running install_scripts 2020-09-20T16:15:28,196 creating build/bdist.linux-armv7l/wheel/PyBEL-0.11.1.dist-info/WHEEL 2020-09-20T16:15:28,970 Building wheel for pybel (setup.py): finished with status 'done' 2020-09-20T16:15:28,977 Created wheel for pybel: filename=PyBEL-0.11.1-py2.py3-none-any.whl size=180110 sha256=389dab4168c3ef4e3c52523024c59cc5ac9e7a6b904399a656e1829f6e7aaf55 2020-09-20T16:15:28,978 Stored in directory: /tmp/pip-ephem-wheel-cache-7otuydxk/wheels/1a/17/fe/77717269ee8c9a8f8bbc0bd2b16e46707c0da12b27d476d641 2020-09-20T16:15:28,982 Successfully built pybel 2020-09-20T16:15:29,020 Removed build tracker: '/tmp/pip-req-tracker-8oynai_q'