2020-09-20T17:02:15,927 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-09-20T17:02:16,632 Created temporary directory: /tmp/pip-ephem-wheel-cache-9wjzjy9z
2020-09-20T17:02:16,637 Created temporary directory: /tmp/pip-req-tracker-ha6tprcm
2020-09-20T17:02:16,637 Initialized build tracking at /tmp/pip-req-tracker-ha6tprcm
2020-09-20T17:02:16,638 Created build tracker: /tmp/pip-req-tracker-ha6tprcm
2020-09-20T17:02:16,638 Entered build tracker: /tmp/pip-req-tracker-ha6tprcm
2020-09-20T17:02:16,640 Created temporary directory: /tmp/pip-wheel-0z3_zbxd
2020-09-20T17:02:16,661 1 location(s) to search for versions of cluster-vcf-records:
2020-09-20T17:02:16,661 * https://pypi.org/simple/cluster-vcf-records/
2020-09-20T17:02:16,662 Fetching project page and analyzing links: https://pypi.org/simple/cluster-vcf-records/
2020-09-20T17:02:16,664 Getting page https://pypi.org/simple/cluster-vcf-records/
2020-09-20T17:02:16,668 Found index url https://pypi.org/simple
2020-09-20T17:02:17,022   Found link https://files.pythonhosted.org/packages/d4/d6/3734f0c79f2dadbfaa33e4275aa95fbf52274813912478c11ac4d930bee2/cluster_vcf_records-0.0.1.tar.gz#sha256=86cc8c67ed4322c02192b8b4aa650b62c83f47659585f208e2716f97a86a77e0 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.0.1
2020-09-20T17:02:17,023   Found link https://files.pythonhosted.org/packages/07/d6/5ae0d95aec080f0f52e27c82feae8249fd06a8c171e966608379810eaf39/cluster_vcf_records-0.0.2.tar.gz#sha256=364801fa48862cc1fe588ff75e1edc516ccbc5a9648b445ffbead4ca544fd0d9 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.0.2
2020-09-20T17:02:17,024   Found link https://files.pythonhosted.org/packages/13/ff/71d7571094b3e073094a7bbe049155a8fa4b563c227b2ed3d1b4fd8a96d8/cluster_vcf_records-0.1.0.tar.gz#sha256=f6aa7c5bad77cb8563bc5752982fef230955ec46675120412d37158ababe8395 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.1.0
2020-09-20T17:02:17,025   Found link https://files.pythonhosted.org/packages/e3/5f/3088a036d0009fdaa8a2eb1418f5d4044047b177957c05d0c7a100e30947/cluster_vcf_records-0.1.1.tar.gz#sha256=6c7f3bcf1aab0b3827392255887abd7aa62f5d0dc2135acafce69589f10152cf (from https://pypi.org/simple/cluster-vcf-records/), version: 0.1.1
2020-09-20T17:02:17,026   Found link https://files.pythonhosted.org/packages/b0/fd/0a4240bbde2c9723d691e8442979b0e06e5370df76cfc32fb520e9ae8c85/cluster_vcf_records-0.2.0.tar.gz#sha256=711cda817534505d3f51be5d06430809c71e8f3d2cfd91c0d99598da481bfebc (from https://pypi.org/simple/cluster-vcf-records/), version: 0.2.0
2020-09-20T17:02:17,027   Found link https://files.pythonhosted.org/packages/b7/77/7be4d17a9e2b7b858c37df6a17bb9101eb010871c8cb093b7a15e55f264c/cluster_vcf_records-0.3.0.tar.gz#sha256=7f40e2bc217252a9a88a0ce8f9c09bc4ddb67dbe059cf358a64dc23976d9c80e (from https://pypi.org/simple/cluster-vcf-records/), version: 0.3.0
2020-09-20T17:02:17,028   Found link https://files.pythonhosted.org/packages/15/33/d52a1e64629ea30992734b4e90975a49aa500e1a88e6673bc3db8e03b9b8/cluster_vcf_records-0.4.0.tar.gz#sha256=8b45e1d01b18290464150925a38f32fd422ccca6c0646a9e23f1ffe3d68ca9c6 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.4.0
2020-09-20T17:02:17,029   Found link https://files.pythonhosted.org/packages/44/44/8b5fb3c47e9dea72312d939835a6b5cc722dc43e2b44f8fad9524a30d191/cluster_vcf_records-0.5.0.tar.gz#sha256=ca35bc4dee213fdcf760f3e29db1caf93f671c91e9660f387acaf0cbc03f0f52 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.5.0
2020-09-20T17:02:17,030   Found link https://files.pythonhosted.org/packages/c9/d2/3f0e93e234ec0ada5f478541a37ef906f7e195a5f88682ea3837d6bfe4f1/cluster_vcf_records-0.6.0.tar.gz#sha256=dd957b2a6bf7a9d3b39025d68acbc6424da7bf9a4780ff224288fe350c5e978e (from https://pypi.org/simple/cluster-vcf-records/), version: 0.6.0
2020-09-20T17:02:17,031   Found link https://files.pythonhosted.org/packages/61/df/e34953b73a2bf60eabef09d692e542ff548a64caad980a64dbcc855818bb/cluster_vcf_records-0.7.0.tar.gz#sha256=435464a0338454e0eb733333fd67bcfce58ced00dd09156979350949fc1f25db (from https://pypi.org/simple/cluster-vcf-records/), version: 0.7.0
2020-09-20T17:02:17,032   Found link https://files.pythonhosted.org/packages/77/0a/6a1d791a1bb0761c1c312797126f4de0a80c59acc553b1b0e52e17e1fa11/cluster_vcf_records-0.8.0.tar.gz#sha256=9b63e8444d3dfb6e24c0a70386b7b6ae1d090992ab833adbe6b6af0e96d848b2 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.8.0
2020-09-20T17:02:17,033   Found link https://files.pythonhosted.org/packages/64/c3/fd6ba91869b276fb6bf45d83cbb4fd7a7f3bdfb7cb392736736a58d1c41a/cluster_vcf_records-0.9.0.tar.gz#sha256=9becdc62ff76fcd08ad7add440e6c743d57f7bbf56fb2dd434d50fa15a0e3e96 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.9.0
2020-09-20T17:02:17,034   Found link https://files.pythonhosted.org/packages/14/32/d1255812dae7b551262654f607066bbefc317b257da455ee7d076b8c2f97/cluster_vcf_records-0.9.1.tar.gz#sha256=6b666785977c520a1085b7eb98c9001a6b2db6c97f88c32569266477873618e2 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.9.1
2020-09-20T17:02:17,035   Found link https://files.pythonhosted.org/packages/e4/b3/396dafc9a5d836c117d583e59d82adea05f4d0475fddbd2cf6673fb471b3/cluster_vcf_records-0.9.2.tar.gz#sha256=9716b4c6455507f60f3ca05ee5b004fe0668447e57505c608637163af44b07d3 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.9.2
2020-09-20T17:02:17,035   Found link https://files.pythonhosted.org/packages/62/70/651131ff130fe09097850fb2c29ace1850d61e9e6ded694fd056fe437707/cluster_vcf_records-0.10.0.tar.gz#sha256=2e7626489c7e68eb347551b21a9259c54dd4d95fdc2d5c2e6faaf3bf675c510a (from https://pypi.org/simple/cluster-vcf-records/), version: 0.10.0
2020-09-20T17:02:17,036   Found link https://files.pythonhosted.org/packages/37/2f/d6e129baac826e79de9f4d12f6027083b9189756fb2e2c319d00e26b152c/cluster_vcf_records-0.10.1.tar.gz#sha256=82bf3d239815704f5ff15f955203012ae9759877edfe920a56c9f4ed136f28d2 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.10.1
2020-09-20T17:02:17,037   Found link https://files.pythonhosted.org/packages/7c/dd/9713cc807713741c7e7af33fab7063767ff6085f87bc322a529da14a27d5/cluster_vcf_records-0.10.2.tar.gz#sha256=1d080b26e03f78e14e4b12523a1bba9de060f272a40d36c16fc731f902530873 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.10.2
2020-09-20T17:02:17,038   Found link https://files.pythonhosted.org/packages/80/57/f5d28a7e7335fc3e0e8bb5a211ee9be423ecac7cefcbc5a60855560faf40/cluster_vcf_records-0.10.3.tar.gz#sha256=7abc9bee6eb2edae6e7c7bc84c5cf6ef058a8f8137ac1a6c597a1534e2fabefd (from https://pypi.org/simple/cluster-vcf-records/), version: 0.10.3
2020-09-20T17:02:17,039   Found link https://files.pythonhosted.org/packages/b4/99/417301de923ebd3ee2e43f19065b1ca74f7c938f5b221a9128b154c2ba49/cluster_vcf_records-0.11.0.tar.gz#sha256=5739559ca9e450e3561a6d44d09c92c5c8fbd877aae80a6ce5cf180a0ef13e97 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.11.0
2020-09-20T17:02:17,040   Found link https://files.pythonhosted.org/packages/38/1c/bad8897f068b01f835d11c7a3b99ba8d50e39d7008bc488945f248ad31d8/cluster_vcf_records-0.11.1.tar.gz#sha256=49140120a495a15cb503c6e0136a2875507b927c6bd11df498be0a100058f5cb (from https://pypi.org/simple/cluster-vcf-records/), version: 0.11.1
2020-09-20T17:02:17,041   Found link https://files.pythonhosted.org/packages/67/87/3e5da6c41fc1b0de4e54bcdbed8f1f9f0d5e2b18c4a316b1b60d967d7b06/cluster_vcf_records-0.12.0.tar.gz#sha256=3871924d34ab1da01e4ffebdc9240679eff7d4e9fd9249b701db5042c4c46432 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.12.0
2020-09-20T17:02:17,042   Found link https://files.pythonhosted.org/packages/82/7b/63bd64b438464d011bf26a3303a931480e4fefa0550a249990b560f18782/cluster_vcf_records-0.12.1.tar.gz#sha256=d8d8d4585a41e375bc53406e6400805c3c1da2a88c96d4d7c00ed55ac1277e88 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.12.1
2020-09-20T17:02:17,043   Found link https://files.pythonhosted.org/packages/c3/c2/b6bb2126318ce4da477ba936d4998ef8aa4ec9e6311770b5557c2b0a3a35/cluster_vcf_records-0.12.2.tar.gz#sha256=10741b6c0f96aa55415b4125008fdfe14d6084705a19f96a2365806328e7eb65 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.12.2
2020-09-20T17:02:17,044   Found link https://files.pythonhosted.org/packages/67/56/291c0ec5c6dc4308b079819161594225cdf2dbb88f8af84dcdc33fa2357a/cluster_vcf_records-0.12.3.tar.gz#sha256=45f02153262b1020959180d08893ad50aa80e1b6a72b14a716e6c19bae5cde12 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.12.3
2020-09-20T17:02:17,045   Found link https://files.pythonhosted.org/packages/5e/4b/2b26fb2bcd744f4d5c07529de9a6221117d4b013434a4c5f7273ba87845b/cluster_vcf_records-0.12.4.tar.gz#sha256=116032bab09c2205ad7fba47e6181b52a383973d6d065e207046de56ce347fa9 (from https://pypi.org/simple/cluster-vcf-records/), version: 0.12.4
2020-09-20T17:02:17,066 Given no hashes to check 1 links for project 'cluster-vcf-records': discarding no candidates
2020-09-20T17:02:17,068 Using version 0.6.0 (newest of versions: 0.6.0)
2020-09-20T17:02:17,076 Collecting cluster-vcf-records==0.6.0
2020-09-20T17:02:17,082   Created temporary directory: /tmp/pip-unpack-kl8uqpt6
2020-09-20T17:02:17,334   Downloading cluster_vcf_records-0.6.0.tar.gz (11 kB)
2020-09-20T17:02:17,428   Added cluster-vcf-records==0.6.0 from https://files.pythonhosted.org/packages/c9/d2/3f0e93e234ec0ada5f478541a37ef906f7e195a5f88682ea3837d6bfe4f1/cluster_vcf_records-0.6.0.tar.gz#sha256=dd957b2a6bf7a9d3b39025d68acbc6424da7bf9a4780ff224288fe350c5e978e to build tracker '/tmp/pip-req-tracker-ha6tprcm'
2020-09-20T17:02:17,432     Running setup.py (path:/tmp/pip-wheel-0z3_zbxd/cluster-vcf-records/setup.py) egg_info for package cluster-vcf-records
2020-09-20T17:02:17,434     Created temporary directory: /tmp/pip-pip-egg-info-andkc4xs
2020-09-20T17:02:17,435     Running command python setup.py egg_info
2020-09-20T17:02:19,586     running egg_info
2020-09-20T17:02:19,592     creating /tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info
2020-09-20T17:02:19,594     writing dependency_links to /tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info/dependency_links.txt
2020-09-20T17:02:19,598     writing requirements to /tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info/requires.txt
2020-09-20T17:02:19,601     writing /tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info/PKG-INFO
2020-09-20T17:02:19,605     writing top-level names to /tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info/top_level.txt
2020-09-20T17:02:19,610     writing manifest file '/tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info/SOURCES.txt'
2020-09-20T17:02:19,971     reading manifest file '/tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info/SOURCES.txt'
2020-09-20T17:02:19,979     writing manifest file '/tmp/pip-pip-egg-info-andkc4xs/cluster_vcf_records.egg-info/SOURCES.txt'
2020-09-20T17:02:20,112   Source in /tmp/pip-wheel-0z3_zbxd/cluster-vcf-records has version 0.6.0, which satisfies requirement cluster-vcf-records==0.6.0 from https://files.pythonhosted.org/packages/c9/d2/3f0e93e234ec0ada5f478541a37ef906f7e195a5f88682ea3837d6bfe4f1/cluster_vcf_records-0.6.0.tar.gz#sha256=dd957b2a6bf7a9d3b39025d68acbc6424da7bf9a4780ff224288fe350c5e978e
2020-09-20T17:02:20,114   Removed cluster-vcf-records==0.6.0 from https://files.pythonhosted.org/packages/c9/d2/3f0e93e234ec0ada5f478541a37ef906f7e195a5f88682ea3837d6bfe4f1/cluster_vcf_records-0.6.0.tar.gz#sha256=dd957b2a6bf7a9d3b39025d68acbc6424da7bf9a4780ff224288fe350c5e978e from build tracker '/tmp/pip-req-tracker-ha6tprcm'
2020-09-20T17:02:20,118 Building wheels for collected packages: cluster-vcf-records
2020-09-20T17:02:20,127   Created temporary directory: /tmp/pip-wheel-xrde_21w
2020-09-20T17:02:20,128   Building wheel for cluster-vcf-records (setup.py): started
2020-09-20T17:02:20,129   Destination directory: /tmp/pip-wheel-xrde_21w
2020-09-20T17:02:20,129   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-0z3_zbxd/cluster-vcf-records/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-0z3_zbxd/cluster-vcf-records/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-xrde_21w
2020-09-20T17:02:22,281   running bdist_wheel
2020-09-20T17:02:22,296   running build
2020-09-20T17:02:22,297   running build_py
2020-09-20T17:02:22,642   creating build
2020-09-20T17:02:22,643   creating build/lib
2020-09-20T17:02:22,644   creating build/lib/cluster_vcf_records
2020-09-20T17:02:22,647   copying cluster_vcf_records/vcf_record_cluster.py -> build/lib/cluster_vcf_records
2020-09-20T17:02:22,653   copying cluster_vcf_records/vcf_file_read.py -> build/lib/cluster_vcf_records
2020-09-20T17:02:22,659   copying cluster_vcf_records/vcf_clusterer.py -> build/lib/cluster_vcf_records
2020-09-20T17:02:22,665   copying cluster_vcf_records/__init__.py -> build/lib/cluster_vcf_records
2020-09-20T17:02:22,670   copying cluster_vcf_records/vcf_record.py -> build/lib/cluster_vcf_records
2020-09-20T17:02:22,687   installing to build/bdist.linux-armv7l/wheel
2020-09-20T17:02:22,688   running install
2020-09-20T17:02:22,690   running install_lib
2020-09-20T17:02:22,697   creating build/bdist.linux-armv7l
2020-09-20T17:02:22,698   creating build/bdist.linux-armv7l/wheel
2020-09-20T17:02:22,701   creating build/bdist.linux-armv7l/wheel/cluster_vcf_records
2020-09-20T17:02:22,704   copying build/lib/cluster_vcf_records/vcf_record_cluster.py -> build/bdist.linux-armv7l/wheel/cluster_vcf_records
2020-09-20T17:02:22,710   copying build/lib/cluster_vcf_records/vcf_file_read.py -> build/bdist.linux-armv7l/wheel/cluster_vcf_records
2020-09-20T17:02:22,715   copying build/lib/cluster_vcf_records/vcf_clusterer.py -> build/bdist.linux-armv7l/wheel/cluster_vcf_records
2020-09-20T17:02:22,721   copying build/lib/cluster_vcf_records/__init__.py -> build/bdist.linux-armv7l/wheel/cluster_vcf_records
2020-09-20T17:02:22,725   copying build/lib/cluster_vcf_records/vcf_record.py -> build/bdist.linux-armv7l/wheel/cluster_vcf_records
2020-09-20T17:02:22,732   running install_egg_info
2020-09-20T17:02:22,781   running egg_info
2020-09-20T17:02:22,784   writing top-level names to cluster_vcf_records.egg-info/top_level.txt
2020-09-20T17:02:22,786   writing dependency_links to cluster_vcf_records.egg-info/dependency_links.txt
2020-09-20T17:02:22,789   writing cluster_vcf_records.egg-info/PKG-INFO
2020-09-20T17:02:22,793   writing requirements to cluster_vcf_records.egg-info/requires.txt
2020-09-20T17:02:22,802   reading manifest file 'cluster_vcf_records.egg-info/SOURCES.txt'
2020-09-20T17:02:22,812   writing manifest file 'cluster_vcf_records.egg-info/SOURCES.txt'
2020-09-20T17:02:22,815   Copying cluster_vcf_records.egg-info to build/bdist.linux-armv7l/wheel/cluster_vcf_records-0.6.0-py3.5.egg-info
2020-09-20T17:02:22,840   running install_scripts
2020-09-20T17:02:23,024   creating build/bdist.linux-armv7l/wheel/cluster_vcf_records-0.6.0.dist-info/WHEEL
2020-09-20T17:02:23,244   Building wheel for cluster-vcf-records (setup.py): finished with status 'done'
2020-09-20T17:02:23,248   Created wheel for cluster-vcf-records: filename=cluster_vcf_records-0.6.0-py3-none-any.whl size=14346 sha256=63df4f536c0c2feab0cb8e44d01762369827714560d2fc8f0800c88a48e8884f
2020-09-20T17:02:23,249   Stored in directory: /tmp/pip-ephem-wheel-cache-9wjzjy9z/wheels/2e/0c/29/44d91274d357cd3f98971401b4748f1b2666ef649a22bbf7d1
2020-09-20T17:02:23,253 Successfully built cluster-vcf-records
2020-09-20T17:02:23,263 Removed build tracker: '/tmp/pip-req-tracker-ha6tprcm'