2020-09-28T12:45:52,266 Created temporary directory: /tmp/pip-ephem-wheel-cache-a8thohwr
2020-09-28T12:45:52,269 Created temporary directory: /tmp/pip-req-tracker-ded2ig9a
2020-09-28T12:45:52,270 Initialized build tracking at /tmp/pip-req-tracker-ded2ig9a
2020-09-28T12:45:52,270 Created build tracker: /tmp/pip-req-tracker-ded2ig9a
2020-09-28T12:45:52,270 Entered build tracker: /tmp/pip-req-tracker-ded2ig9a
2020-09-28T12:45:52,271 Created temporary directory: /tmp/pip-wheel-pw8_ppi5
2020-09-28T12:45:52,284 1 location(s) to search for versions of adaptivepele:
2020-09-28T12:45:52,284 * https://pypi.org/simple/adaptivepele/
2020-09-28T12:45:52,285 Fetching project page and analyzing links: https://pypi.org/simple/adaptivepele/
2020-09-28T12:45:52,286 Getting page https://pypi.org/simple/adaptivepele/
2020-09-28T12:45:52,288 Found index url https://pypi.org/simple
2020-09-28T12:45:52,376   Found link https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 (from https://pypi.org/simple/adaptivepele/), version: 1.5.1
2020-09-28T12:45:52,376   Found link https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz#sha256=7df75c5c57821492d1ba86e44d41b65e6a9105afe6048e85e993741579683848 (from https://pypi.org/simple/adaptivepele/), version: 1.5.2
2020-09-28T12:45:52,376   Found link https://files.pythonhosted.org/packages/48/3b/f12bfdcfd7f0fdcb2f58d659ff94c26666767eec4ca8454750a3241c395e/AdaptivePELE-1.6.tar.gz#sha256=afc51a35222361e6c0caf880e1d52e91b5658dbe4740f82a3460a97ebaa48bf5 (from https://pypi.org/simple/adaptivepele/), version: 1.6
2020-09-28T12:45:52,377   Found link https://files.pythonhosted.org/packages/d0/1b/f731952d133f4a684ae4376f67513af80d1f759b9ef4d6137767e0fc8ed9/AdaptivePELE-1.6.2.tar.gz#sha256=01891c877f6615a876c61c6bf1d68930d4af63750eb3f1a4e7e23ff0f962bbd5 (from https://pypi.org/simple/adaptivepele/), version: 1.6.2
2020-09-28T12:45:52,377   Found link https://files.pythonhosted.org/packages/25/2c/65b787dc210294855b8f27abeb4a7761f25fce34e0b8bfd56779c679440d/AdaptivePELE-1.6.3.tar.gz#sha256=34be232bc04bde2dcc4ebd900dd9c71e6f25eed93b7c875463c07d3dd8ce1aa9 (from https://pypi.org/simple/adaptivepele/), version: 1.6.3
2020-09-28T12:45:52,381 Given no hashes to check 1 links for project 'adaptivepele': discarding no candidates
2020-09-28T12:45:52,382 Using version 1.6.3 (newest of versions: 1.6.3)
2020-09-28T12:45:52,385 Collecting adaptivepele==1.6.3
2020-09-28T12:45:52,387   Created temporary directory: /tmp/pip-unpack-e8su3djq
2020-09-28T12:45:52,455   Downloading AdaptivePELE-1.6.3.tar.gz (7.3 MB)
2020-09-28T12:45:55,286   Added adaptivepele==1.6.3 from https://files.pythonhosted.org/packages/25/2c/65b787dc210294855b8f27abeb4a7761f25fce34e0b8bfd56779c679440d/AdaptivePELE-1.6.3.tar.gz#sha256=34be232bc04bde2dcc4ebd900dd9c71e6f25eed93b7c875463c07d3dd8ce1aa9 to build tracker '/tmp/pip-req-tracker-ded2ig9a'
2020-09-28T12:45:55,288     Running setup.py (path:/tmp/pip-wheel-pw8_ppi5/adaptivepele/setup.py) egg_info for package adaptivepele
2020-09-28T12:45:55,288     Created temporary directory: /tmp/pip-pip-egg-info-mjcin2gw
2020-09-28T12:45:55,289     Running command python setup.py egg_info
2020-09-28T12:45:56,810     Warning: 'classifiers' should be a list, got type 'tuple'
2020-09-28T12:45:56,905     running egg_info
2020-09-28T12:45:56,908     creating /tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info
2020-09-28T12:45:56,909     writing /tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info/PKG-INFO
2020-09-28T12:45:56,912     writing dependency_links to /tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info/dependency_links.txt
2020-09-28T12:45:56,915     writing requirements to /tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info/requires.txt
2020-09-28T12:45:56,917     writing top-level names to /tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info/top_level.txt
2020-09-28T12:45:56,919     writing manifest file '/tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info/SOURCES.txt'
2020-09-28T12:45:57,071     reading manifest file '/tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info/SOURCES.txt'
2020-09-28T12:45:57,073     reading manifest template 'MANIFEST.in'
2020-09-28T12:45:57,129     writing manifest file '/tmp/pip-pip-egg-info-mjcin2gw/AdaptivePELE.egg-info/SOURCES.txt'
2020-09-28T12:45:57,233   Source in /tmp/pip-wheel-pw8_ppi5/adaptivepele has version 1.6.3, which satisfies requirement adaptivepele==1.6.3 from https://files.pythonhosted.org/packages/25/2c/65b787dc210294855b8f27abeb4a7761f25fce34e0b8bfd56779c679440d/AdaptivePELE-1.6.3.tar.gz#sha256=34be232bc04bde2dcc4ebd900dd9c71e6f25eed93b7c875463c07d3dd8ce1aa9
2020-09-28T12:45:57,234   Removed adaptivepele==1.6.3 from https://files.pythonhosted.org/packages/25/2c/65b787dc210294855b8f27abeb4a7761f25fce34e0b8bfd56779c679440d/AdaptivePELE-1.6.3.tar.gz#sha256=34be232bc04bde2dcc4ebd900dd9c71e6f25eed93b7c875463c07d3dd8ce1aa9 from build tracker '/tmp/pip-req-tracker-ded2ig9a'
2020-09-28T12:45:57,236 Building wheels for collected packages: adaptivepele
2020-09-28T12:45:57,241   Created temporary directory: /tmp/pip-wheel-o4oy0i2v
2020-09-28T12:45:57,242   Building wheel for adaptivepele (setup.py): started
2020-09-28T12:45:57,242   Destination directory: /tmp/pip-wheel-o4oy0i2v
2020-09-28T12:45:57,242   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-pw8_ppi5/adaptivepele/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-pw8_ppi5/adaptivepele/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-o4oy0i2v
2020-09-28T12:45:58,547   Warning: 'classifiers' should be a list, got type 'tuple'
2020-09-28T12:45:58,655   running bdist_wheel
2020-09-28T12:45:58,660   running build
2020-09-28T12:45:58,660   running build_py
2020-09-28T12:45:58,781   creating build
2020-09-28T12:45:58,781   creating build/lib.linux-armv7l-3.7
2020-09-28T12:45:58,782   creating build/lib.linux-armv7l-3.7/AdaptivePELE
2020-09-28T12:45:58,784   copying AdaptivePELE/runAllTests.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2020-09-28T12:45:58,786   copying AdaptivePELE/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2020-09-28T12:45:58,787   copying AdaptivePELE/adaptiveSampling.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2020-09-28T12:45:58,791   copying AdaptivePELE/makeRelease.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2020-09-28T12:45:58,793   copying AdaptivePELE/automateRoundsAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2020-09-28T12:45:58,795   creating build/lib.linux-armv7l-3.7/AdaptivePELE/atomset
2020-09-28T12:45:58,796   copying AdaptivePELE/atomset/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/atomset
2020-09-28T12:45:58,798   copying AdaptivePELE/atomset/setup.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/atomset
2020-09-28T12:45:58,800   creating build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2020-09-28T12:45:58,801   copying AdaptivePELE/constants/symmetries.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2020-09-28T12:45:58,803   copying AdaptivePELE/constants/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2020-09-28T12:45:58,805   copying AdaptivePELE/constants/blockNames.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2020-09-28T12:45:58,807   copying AdaptivePELE/constants/constants.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2020-09-28T12:45:58,811   creating build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2020-09-28T12:45:58,812   copying AdaptivePELE/spawning/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2020-09-28T12:45:58,814   copying AdaptivePELE/spawning/spawning.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2020-09-28T12:45:58,818   copying AdaptivePELE/spawning/spawningTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2020-09-28T12:45:58,820   copying AdaptivePELE/spawning/densitycalculatortypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2020-09-28T12:45:58,823   copying AdaptivePELE/spawning/densitycalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2020-09-28T12:45:58,826   creating build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2020-09-28T12:45:58,827   copying AdaptivePELE/validator/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2020-09-28T12:45:58,829   copying AdaptivePELE/validator/validatorBlockNames.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2020-09-28T12:45:58,832   copying AdaptivePELE/validator/controlFileValidator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2020-09-28T12:45:58,836   creating build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2020-09-28T12:45:58,837   copying AdaptivePELE/clustering/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2020-09-28T12:45:58,839   copying AdaptivePELE/clustering/thresholdcalculatortypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2020-09-28T12:45:58,841   copying AdaptivePELE/clustering/thresholdcalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2020-09-28T12:45:58,844   copying AdaptivePELE/clustering/clustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2020-09-28T12:45:58,849   copying AdaptivePELE/clustering/clusteringTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2020-09-28T12:45:58,853   creating build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,854   copying AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,856   copying AdaptivePELE/freeEnergies/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,858   copying AdaptivePELE/freeEnergies/prepareMSMFolders.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,860   copying AdaptivePELE/freeEnergies/computeDGGrid.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,863   copying AdaptivePELE/freeEnergies/estimateDGAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,865   copying AdaptivePELE/freeEnergies/extendTrajectories.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,868   copying AdaptivePELE/freeEnergies/checkDetailedBalance.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,871   copying AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,873   copying AdaptivePELE/freeEnergies/getRepresentativeStructures.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,876   copying AdaptivePELE/freeEnergies/cluster.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,878   copying AdaptivePELE/freeEnergies/calculateDGiterations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,881   copying AdaptivePELE/freeEnergies/runMarkovChainModel.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,883   copying AdaptivePELE/freeEnergies/ownBuildMSM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,886   copying AdaptivePELE/freeEnergies/estimateDG.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,889   copying AdaptivePELE/freeEnergies/extractCoords.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,892   copying AdaptivePELE/freeEnergies/computeDeltaG.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,895   copying AdaptivePELE/freeEnergies/estimate.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,897   copying AdaptivePELE/freeEnergies/utilitiesFreeEnergies.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:45:58,901   creating build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,902   copying AdaptivePELE/utilities/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,904   copying AdaptivePELE/utilities/clusteringUtilities.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,906   copying AdaptivePELE/utilities/PDBLoader.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,910   copying AdaptivePELE/utilities/utilities.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,914   copying AdaptivePELE/utilities/generate_topology_object.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,918   copying AdaptivePELE/utilities/synchronization.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,921   copying AdaptivePELE/utilities/conda_deployment.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2020-09-28T12:45:58,924   creating build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2020-09-28T12:45:58,925   copying AdaptivePELE/simulation/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2020-09-28T12:45:58,927   copying AdaptivePELE/simulation/simulationTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2020-09-28T12:45:58,929   copying AdaptivePELE/simulation/simulationrunner.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2020-09-28T12:45:58,934   copying AdaptivePELE/simulation/openmm_simulations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2020-09-28T12:45:58,939   creating build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,940   copying AdaptivePELE/tests/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,942   copying AdaptivePELE/tests/testThresholdcalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,944   copying AdaptivePELE/tests/testMD_CUDA.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,947   copying AdaptivePELE/tests/testAdaptiveSampling.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,949   copying AdaptivePELE/tests/testClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,952   copying AdaptivePELE/tests/testAtomset.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,955   copying AdaptivePELE/tests/testReporter.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,958   copying AdaptivePELE/tests/testMD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,960   copying AdaptivePELE/tests/testDensityCalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,964   copying AdaptivePELE/tests/testSpawning.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2020-09-28T12:45:58,970   creating build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,971   copying AdaptivePELE/analysis/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,973   copying AdaptivePELE/analysis/clusters_lagtime_grid.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,976   copying AdaptivePELE/analysis/histCM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,978   copying AdaptivePELE/analysis/identifyClusterSnapshot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,981   copying AdaptivePELE/analysis/generateBox.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,983   copying AdaptivePELE/analysis/splitTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,985   copying AdaptivePELE/analysis/plotRMSF.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,988   copying AdaptivePELE/analysis/analyse.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,991   copying AdaptivePELE/analysis/standarize_MD_energies.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,993   copying AdaptivePELE/analysis/analysis_utils.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,995   copying AdaptivePELE/analysis/extract_ligand_traj.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:58,998   copying AdaptivePELE/analysis/writeTrajToSnapshot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,000   copying AdaptivePELE/analysis/convertTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,002   copying AdaptivePELE/analysis/crossValidationClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,005   copying AdaptivePELE/analysis/interactivePlot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,007   copying AdaptivePELE/analysis/unbinding.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,010   copying AdaptivePELE/analysis/simple_postprocessing.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,012   copying AdaptivePELE/analysis/correctRMSD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,015   copying AdaptivePELE/analysis/plotAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,018   copying AdaptivePELE/analysis/cluster.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,020   copying AdaptivePELE/analysis/calculateSASAvalues.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,023   copying AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,026   copying AdaptivePELE/analysis/reportSimulation.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,028   copying AdaptivePELE/analysis/compareClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,031   copying AdaptivePELE/analysis/makePNGs.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,033   copying AdaptivePELE/analysis/simulationToCsv.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,036   copying AdaptivePELE/analysis/findfirstbindingevent.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,038   copying AdaptivePELE/analysis/clusterAdaptiveRun.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,041   copying AdaptivePELE/analysis/autoCorrelation.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,044   copying AdaptivePELE/analysis/plotSpawningClusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,046   copying AdaptivePELE/analysis/analyseClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,048   copying AdaptivePELE/analysis/count_clusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,051   copying AdaptivePELE/analysis/pathwayRMSD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,054   copying AdaptivePELE/analysis/trajectory_processing.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,056   copying AdaptivePELE/analysis/plot3DNetwork.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,059   copying AdaptivePELE/analysis/writeNetworkFiles.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,061   copying AdaptivePELE/analysis/bestStructs.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,064   copying AdaptivePELE/analysis/selectOnPlot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,066   copying AdaptivePELE/analysis/networkCM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,069   copying AdaptivePELE/analysis/numberOfClusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,072   copying AdaptivePELE/analysis/writeClusteringStructures.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,074   copying AdaptivePELE/analysis/dehidratate_and_align.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,076   copying AdaptivePELE/analysis/filter_by_radius.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,079   copying AdaptivePELE/analysis/addRejectedSteps.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,081   copying AdaptivePELE/analysis/calculateDistances.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,083   copying AdaptivePELE/analysis/foldersFirstBindingEvent.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2020-09-28T12:45:59,100   running build_ext
2020-09-28T12:45:59,106   cythoning AdaptivePELE/atomset/atomset.pyx to AdaptivePELE/atomset/atomset.c
2020-09-28T12:45:59,726   /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-pw8_ppi5/adaptivepele/AdaptivePELE/atomset/atomset.pxd
2020-09-28T12:45:59,726     tree = Parsing.p_module(s, pxd, full_module_name)
2020-09-28T12:46:02,152   skipping 'AdaptivePELE/atomset/SymmetryContactMapEvaluator.c' Cython extension (up-to-date)
2020-09-28T12:46:02,152   skipping 'AdaptivePELE/atomset/RMSDCalculator.c' Cython extension (up-to-date)
2020-09-28T12:46:02,153   skipping 'AdaptivePELE/freeEnergies/utils.c' Cython extension (up-to-date)
2020-09-28T12:46:02,153   building 'AdaptivePELE.atomset.atomset' extension
2020-09-28T12:46:02,154   creating build/temp.linux-armv7l-3.7
2020-09-28T12:46:02,154   creating build/temp.linux-armv7l-3.7/AdaptivePELE
2020-09-28T12:46:02,155   creating build/temp.linux-armv7l-3.7/AdaptivePELE/atomset
2020-09-28T12:46:02,155   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/atomset/atomset.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.o
2020-09-28T12:46:02,533   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-09-28T12:46:02,534                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-09-28T12:46:02,534                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-09-28T12:46:02,534                    from AdaptivePELE/atomset/atomset.c:610:
2020-09-28T12:46:02,534   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-09-28T12:46:02,535    #warning "Using deprecated NumPy API, disable it with " \
2020-09-28T12:46:02,535     ^~~~~~~
2020-09-28T12:46:33,143   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.cpython-37m-arm-linux-gnueabihf.so
2020-09-28T12:46:33,409   building 'AdaptivePELE.atomset.SymmetryContactMapEvaluator' extension
2020-09-28T12:46:33,409   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/atomset/SymmetryContactMapEvaluator.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.o
2020-09-28T12:46:33,749   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-09-28T12:46:33,750                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-09-28T12:46:33,750                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-09-28T12:46:33,750                    from AdaptivePELE/atomset/SymmetryContactMapEvaluator.c:610:
2020-09-28T12:46:33,751   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-09-28T12:46:33,751    #warning "Using deprecated NumPy API, disable it with " \
2020-09-28T12:46:33,751     ^~~~~~~
2020-09-28T12:46:46,388   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-37m-arm-linux-gnueabihf.so
2020-09-28T12:46:46,567   building 'AdaptivePELE.atomset.RMSDCalculator' extension
2020-09-28T12:46:46,567   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/atomset/RMSDCalculator.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.o
2020-09-28T12:46:46,905   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-09-28T12:46:46,906                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-09-28T12:46:46,906                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-09-28T12:46:46,906                    from AdaptivePELE/atomset/RMSDCalculator.c:610:
2020-09-28T12:46:46,907   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-09-28T12:46:46,907    #warning "Using deprecated NumPy API, disable it with " \
2020-09-28T12:46:46,907     ^~~~~~~
2020-09-28T12:46:54,532   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.cpython-37m-arm-linux-gnueabihf.so
2020-09-28T12:46:54,690   building 'AdaptivePELE.freeEnergies.utils' extension
2020-09-28T12:46:54,691   creating build/temp.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2020-09-28T12:46:54,691   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/freeEnergies -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/freeEnergies/utils.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.o
2020-09-28T12:46:55,035   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-09-28T12:46:55,035                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-09-28T12:46:55,035                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-09-28T12:46:55,036                    from AdaptivePELE/freeEnergies/utils.c:610:
2020-09-28T12:46:55,036   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-09-28T12:46:55,036    #warning "Using deprecated NumPy API, disable it with " \
2020-09-28T12:46:55,036     ^~~~~~~
2020-09-28T12:47:11,011   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.cpython-37m-arm-linux-gnueabihf.so
2020-09-28T12:47:11,222   installing to build/bdist.linux-armv7l/wheel
2020-09-28T12:47:11,223   running install
2020-09-28T12:47:11,224   running install_lib
2020-09-28T12:47:11,230   creating build/bdist.linux-armv7l
2020-09-28T12:47:11,230   creating build/bdist.linux-armv7l/wheel
2020-09-28T12:47:11,232   creating build/bdist.linux-armv7l/wheel/AdaptivePELE
2020-09-28T12:47:11,234   copying build/lib.linux-armv7l-3.7/AdaptivePELE/runAllTests.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2020-09-28T12:47:11,237   copying build/lib.linux-armv7l-3.7/AdaptivePELE/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2020-09-28T12:47:11,240   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2020-09-28T12:47:11,241   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2020-09-28T12:47:11,243   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2020-09-28T12:47:11,258   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2020-09-28T12:47:11,307   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/setup.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2020-09-28T12:47:11,309   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2020-09-28T12:47:11,330   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2020-09-28T12:47:11,331   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/symmetries.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2020-09-28T12:47:11,334   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2020-09-28T12:47:11,336   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/blockNames.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2020-09-28T12:47:11,340   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/constants.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2020-09-28T12:47:11,343   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2020-09-28T12:47:11,344   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2020-09-28T12:47:11,347   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/spawning.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2020-09-28T12:47:11,352   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/spawningTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2020-09-28T12:47:11,354   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/densitycalculatortypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2020-09-28T12:47:11,357   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/densitycalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2020-09-28T12:47:11,360   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2020-09-28T12:47:11,361   copying build/lib.linux-armv7l-3.7/AdaptivePELE/validator/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2020-09-28T12:47:11,364   copying build/lib.linux-armv7l-3.7/AdaptivePELE/validator/validatorBlockNames.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2020-09-28T12:47:11,367   copying build/lib.linux-armv7l-3.7/AdaptivePELE/validator/controlFileValidator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2020-09-28T12:47:11,370   copying build/lib.linux-armv7l-3.7/AdaptivePELE/adaptiveSampling.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2020-09-28T12:47:11,374   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2020-09-28T12:47:11,375   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2020-09-28T12:47:11,378   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/thresholdcalculatortypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2020-09-28T12:47:11,380   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/thresholdcalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2020-09-28T12:47:11,383   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/clustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2020-09-28T12:47:11,389   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/clusteringTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2020-09-28T12:47:11,392   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,394   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,396   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,398   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/prepareMSMFolders.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,401   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/computeDGGrid.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,404   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/estimateDGAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,406   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/extendTrajectories.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,409   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/checkDetailedBalance.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,412   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,415   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/getRepresentativeStructures.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,417   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/cluster.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,420   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,452   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/calculateDGiterations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,454   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/runMarkovChainModel.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,457   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/ownBuildMSM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,460   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/estimateDG.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,463   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/extractCoords.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,467   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/computeDeltaG.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,470   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/estimate.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,473   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utilitiesFreeEnergies.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2020-09-28T12:47:11,476   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,478   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,480   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/clusteringUtilities.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,482   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/PDBLoader.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,486   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/utilities.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,489   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/generate_topology_object.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,492   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/synchronization.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,495   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/conda_deployment.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2020-09-28T12:47:11,497   copying build/lib.linux-armv7l-3.7/AdaptivePELE/makeRelease.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2020-09-28T12:47:11,500   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2020-09-28T12:47:11,501   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2020-09-28T12:47:11,504   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/simulationTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2020-09-28T12:47:11,506   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/simulationrunner.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2020-09-28T12:47:11,511   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/openmm_simulations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2020-09-28T12:47:11,516   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,517   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,519   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testThresholdcalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,522   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testMD_CUDA.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,524   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testAdaptiveSampling.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,527   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,530   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testAtomset.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,533   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testReporter.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,536   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testMD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,538   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testDensityCalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,541   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testSpawning.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2020-09-28T12:47:11,546   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,547   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,550   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/clusters_lagtime_grid.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,553   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/histCM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,555   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/identifyClusterSnapshot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,558   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/generateBox.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,560   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/splitTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,563   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plotRMSF.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,566   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/analyse.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,568   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/standarize_MD_energies.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,571   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/analysis_utils.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,574   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/extract_ligand_traj.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,576   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/writeTrajToSnapshot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,579   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/convertTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,581   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/crossValidationClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,584   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/interactivePlot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,587   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/unbinding.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,590   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/simple_postprocessing.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,592   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/correctRMSD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,595   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plotAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,598   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/cluster.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,601   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/calculateSASAvalues.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,604   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,607   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/reportSimulation.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,610   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/compareClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,613   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/makePNGs.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,616   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/simulationToCsv.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,618   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/findfirstbindingevent.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,621   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/clusterAdaptiveRun.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,624   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/autoCorrelation.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,627   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plotSpawningClusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,630   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/analyseClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,632   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/count_clusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,635   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/pathwayRMSD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,637   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/trajectory_processing.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,640   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plot3DNetwork.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,643   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/writeNetworkFiles.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,645   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/bestStructs.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,648   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/selectOnPlot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,651   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/networkCM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,653   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/numberOfClusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,656   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/writeClusteringStructures.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,658   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/dehidratate_and_align.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,661   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/filter_by_radius.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,663   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/addRejectedSteps.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,666   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/calculateDistances.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,668   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/foldersFirstBindingEvent.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2020-09-28T12:47:11,671   copying build/lib.linux-armv7l-3.7/AdaptivePELE/automateRoundsAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2020-09-28T12:47:11,673   running install_egg_info
2020-09-28T12:47:11,700   running egg_info
2020-09-28T12:47:11,701   writing AdaptivePELE.egg-info/PKG-INFO
2020-09-28T12:47:11,703   writing dependency_links to AdaptivePELE.egg-info/dependency_links.txt
2020-09-28T12:47:11,706   writing requirements to AdaptivePELE.egg-info/requires.txt
2020-09-28T12:47:11,707   writing top-level names to AdaptivePELE.egg-info/top_level.txt
2020-09-28T12:47:11,744   reading manifest file 'AdaptivePELE.egg-info/SOURCES.txt'
2020-09-28T12:47:11,752   reading manifest template 'MANIFEST.in'
2020-09-28T12:47:11,813   writing manifest file 'AdaptivePELE.egg-info/SOURCES.txt'
2020-09-28T12:47:11,815   Copying AdaptivePELE.egg-info to build/bdist.linux-armv7l/wheel/AdaptivePELE-1.6.3-py3.7.egg-info
2020-09-28T12:47:11,829   running install_scripts
2020-09-28T12:47:11,885   creating build/bdist.linux-armv7l/wheel/AdaptivePELE-1.6.3.dist-info/WHEEL
2020-09-28T12:47:11,887   creating '/tmp/pip-wheel-o4oy0i2v/AdaptivePELE-1.6.3-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-09-28T12:47:11,890   adding 'AdaptivePELE/__init__.py'
2020-09-28T12:47:11,894   adding 'AdaptivePELE/adaptiveSampling.py'
2020-09-28T12:47:11,896   adding 'AdaptivePELE/automateRoundsAdaptive.py'
2020-09-28T12:47:11,897   adding 'AdaptivePELE/makeRelease.py'
2020-09-28T12:47:11,898   adding 'AdaptivePELE/runAllTests.py'
2020-09-28T12:47:11,901   adding 'AdaptivePELE/analysis/__init__.py'
2020-09-28T12:47:11,902   adding 'AdaptivePELE/analysis/addRejectedSteps.py'
2020-09-28T12:47:11,903   adding 'AdaptivePELE/analysis/analyse.py'
2020-09-28T12:47:11,905   adding 'AdaptivePELE/analysis/analyseClustering.py'
2020-09-28T12:47:11,906   adding 'AdaptivePELE/analysis/analysis_utils.py'
2020-09-28T12:47:11,908   adding 'AdaptivePELE/analysis/autoCorrelation.py'
2020-09-28T12:47:11,909   adding 'AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py'
2020-09-28T12:47:11,911   adding 'AdaptivePELE/analysis/bestStructs.py'
2020-09-28T12:47:11,913   adding 'AdaptivePELE/analysis/calculateDistances.py'
2020-09-28T12:47:11,914   adding 'AdaptivePELE/analysis/calculateSASAvalues.py'
2020-09-28T12:47:11,917   adding 'AdaptivePELE/analysis/cluster.py'
2020-09-28T12:47:11,919   adding 'AdaptivePELE/analysis/clusterAdaptiveRun.py'
2020-09-28T12:47:11,920   adding 'AdaptivePELE/analysis/clusters_lagtime_grid.py'
2020-09-28T12:47:11,922   adding 'AdaptivePELE/analysis/compareClustering.py'
2020-09-28T12:47:11,923   adding 'AdaptivePELE/analysis/convertTrajectory.py'
2020-09-28T12:47:11,925   adding 'AdaptivePELE/analysis/correctRMSD.py'
2020-09-28T12:47:11,927   adding 'AdaptivePELE/analysis/count_clusters.py'
2020-09-28T12:47:11,928   adding 'AdaptivePELE/analysis/crossValidationClustering.py'
2020-09-28T12:47:11,929   adding 'AdaptivePELE/analysis/dehidratate_and_align.py'
2020-09-28T12:47:11,931   adding 'AdaptivePELE/analysis/extract_ligand_traj.py'
2020-09-28T12:47:11,932   adding 'AdaptivePELE/analysis/filter_by_radius.py'
2020-09-28T12:47:11,933   adding 'AdaptivePELE/analysis/findfirstbindingevent.py'
2020-09-28T12:47:11,935   adding 'AdaptivePELE/analysis/foldersFirstBindingEvent.py'
2020-09-28T12:47:11,936   adding 'AdaptivePELE/analysis/generateBox.py'
2020-09-28T12:47:11,937   adding 'AdaptivePELE/analysis/histCM.py'
2020-09-28T12:47:11,939   adding 'AdaptivePELE/analysis/identifyClusterSnapshot.py'
2020-09-28T12:47:11,942   adding 'AdaptivePELE/analysis/interactivePlot.py'
2020-09-28T12:47:11,943   adding 'AdaptivePELE/analysis/makePNGs.py'
2020-09-28T12:47:11,944   adding 'AdaptivePELE/analysis/networkCM.py'
2020-09-28T12:47:11,946   adding 'AdaptivePELE/analysis/numberOfClusters.py'
2020-09-28T12:47:11,947   adding 'AdaptivePELE/analysis/pathwayRMSD.py'
2020-09-28T12:47:11,949   adding 'AdaptivePELE/analysis/plot3DNetwork.py'
2020-09-28T12:47:11,951   adding 'AdaptivePELE/analysis/plotAdaptive.py'
2020-09-28T12:47:11,952   adding 'AdaptivePELE/analysis/plotRMSF.py'
2020-09-28T12:47:11,954   adding 'AdaptivePELE/analysis/plotSpawningClusters.py'
2020-09-28T12:47:11,955   adding 'AdaptivePELE/analysis/reportSimulation.py'
2020-09-28T12:47:11,958   adding 'AdaptivePELE/analysis/selectOnPlot.py'
2020-09-28T12:47:11,959   adding 'AdaptivePELE/analysis/simple_postprocessing.py'
2020-09-28T12:47:11,960   adding 'AdaptivePELE/analysis/simulationToCsv.py'
2020-09-28T12:47:11,962   adding 'AdaptivePELE/analysis/splitTrajectory.py'
2020-09-28T12:47:11,963   adding 'AdaptivePELE/analysis/standarize_MD_energies.py'
2020-09-28T12:47:11,965   adding 'AdaptivePELE/analysis/trajectory_processing.py'
2020-09-28T12:47:11,966   adding 'AdaptivePELE/analysis/unbinding.py'
2020-09-28T12:47:11,967   adding 'AdaptivePELE/analysis/writeClusteringStructures.py'
2020-09-28T12:47:11,969   adding 'AdaptivePELE/analysis/writeNetworkFiles.py'
2020-09-28T12:47:11,970   adding 'AdaptivePELE/analysis/writeTrajToSnapshot.py'
2020-09-28T12:47:12,054   adding 'AdaptivePELE/atomset/RMSDCalculator.cpython-37m-arm-linux-gnueabihf.so'
2020-09-28T12:47:12,196   adding 'AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-37m-arm-linux-gnueabihf.so'
2020-09-28T12:47:12,201   adding 'AdaptivePELE/atomset/__init__.py'
2020-09-28T12:47:12,504   adding 'AdaptivePELE/atomset/atomset.cpython-37m-arm-linux-gnueabihf.so'
2020-09-28T12:47:12,516   adding 'AdaptivePELE/atomset/setup.py'
2020-09-28T12:47:12,518   adding 'AdaptivePELE/clustering/__init__.py'
2020-09-28T12:47:12,528   adding 'AdaptivePELE/clustering/clustering.py'
2020-09-28T12:47:12,529   adding 'AdaptivePELE/clustering/clusteringTypes.py'
2020-09-28T12:47:12,531   adding 'AdaptivePELE/clustering/thresholdcalculator.py'
2020-09-28T12:47:12,532   adding 'AdaptivePELE/clustering/thresholdcalculatortypes.py'
2020-09-28T12:47:12,534   adding 'AdaptivePELE/constants/__init__.py'
2020-09-28T12:47:12,535   adding 'AdaptivePELE/constants/blockNames.py'
2020-09-28T12:47:12,537   adding 'AdaptivePELE/constants/constants.py'
2020-09-28T12:47:12,538   adding 'AdaptivePELE/constants/symmetries.py'
2020-09-28T12:47:12,540   adding 'AdaptivePELE/freeEnergies/__init__.py'
2020-09-28T12:47:12,542   adding 'AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py'
2020-09-28T12:47:12,543   adding 'AdaptivePELE/freeEnergies/calculateDGiterations.py'
2020-09-28T12:47:12,545   adding 'AdaptivePELE/freeEnergies/checkDetailedBalance.py'
2020-09-28T12:47:12,546   adding 'AdaptivePELE/freeEnergies/cluster.py'
2020-09-28T12:47:12,548   adding 'AdaptivePELE/freeEnergies/computeDGGrid.py'
2020-09-28T12:47:12,550   adding 'AdaptivePELE/freeEnergies/computeDeltaG.py'
2020-09-28T12:47:12,552   adding 'AdaptivePELE/freeEnergies/estimate.py'
2020-09-28T12:47:12,554   adding 'AdaptivePELE/freeEnergies/estimateDG.py'
2020-09-28T12:47:12,556   adding 'AdaptivePELE/freeEnergies/estimateDGAdaptive.py'
2020-09-28T12:47:12,557   adding 'AdaptivePELE/freeEnergies/extendTrajectories.py'
2020-09-28T12:47:12,561   adding 'AdaptivePELE/freeEnergies/extractCoords.py'
2020-09-28T12:47:12,562   adding 'AdaptivePELE/freeEnergies/getRepresentativeStructures.py'
2020-09-28T12:47:12,564   adding 'AdaptivePELE/freeEnergies/ownBuildMSM.py'
2020-09-28T12:47:12,565   adding 'AdaptivePELE/freeEnergies/prepareMSMFolders.py'
2020-09-28T12:47:12,567   adding 'AdaptivePELE/freeEnergies/runMarkovChainModel.py'
2020-09-28T12:47:12,568   adding 'AdaptivePELE/freeEnergies/utilitiesFreeEnergies.py'
2020-09-28T12:47:12,760   adding 'AdaptivePELE/freeEnergies/utils.cpython-37m-arm-linux-gnueabihf.so'
2020-09-28T12:47:12,767   adding 'AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py'
2020-09-28T12:47:12,768   adding 'AdaptivePELE/simulation/__init__.py'
2020-09-28T12:47:12,773   adding 'AdaptivePELE/simulation/openmm_simulations.py'
2020-09-28T12:47:12,774   adding 'AdaptivePELE/simulation/simulationTypes.py'
2020-09-28T12:47:12,783   adding 'AdaptivePELE/simulation/simulationrunner.py'
2020-09-28T12:47:12,785   adding 'AdaptivePELE/spawning/__init__.py'
2020-09-28T12:47:12,786   adding 'AdaptivePELE/spawning/densitycalculator.py'
2020-09-28T12:47:12,787   adding 'AdaptivePELE/spawning/densitycalculatortypes.py'
2020-09-28T12:47:12,793   adding 'AdaptivePELE/spawning/spawning.py'
2020-09-28T12:47:12,795   adding 'AdaptivePELE/spawning/spawningTypes.py'
2020-09-28T12:47:12,797   adding 'AdaptivePELE/tests/__init__.py'
2020-09-28T12:47:12,798   adding 'AdaptivePELE/tests/testAdaptiveSampling.py'
2020-09-28T12:47:12,801   adding 'AdaptivePELE/tests/testAtomset.py'
2020-09-28T12:47:12,802   adding 'AdaptivePELE/tests/testClustering.py'
2020-09-28T12:47:12,803   adding 'AdaptivePELE/tests/testDensityCalculator.py'
2020-09-28T12:47:12,805   adding 'AdaptivePELE/tests/testMD.py'
2020-09-28T12:47:12,806   adding 'AdaptivePELE/tests/testMD_CUDA.py'
2020-09-28T12:47:12,807   adding 'AdaptivePELE/tests/testReporter.py'
2020-09-28T12:47:12,809   adding 'AdaptivePELE/tests/testSpawning.py'
2020-09-28T12:47:12,810   adding 'AdaptivePELE/tests/testThresholdcalculator.py'
2020-09-28T12:47:12,814   adding 'AdaptivePELE/utilities/PDBLoader.py'
2020-09-28T12:47:12,816   adding 'AdaptivePELE/utilities/__init__.py'
2020-09-28T12:47:12,817   adding 'AdaptivePELE/utilities/clusteringUtilities.py'
2020-09-28T12:47:12,818   adding 'AdaptivePELE/utilities/conda_deployment.py'
2020-09-28T12:47:12,819   adding 'AdaptivePELE/utilities/generate_topology_object.py'
2020-09-28T12:47:12,821   adding 'AdaptivePELE/utilities/synchronization.py'
2020-09-28T12:47:12,825   adding 'AdaptivePELE/utilities/utilities.py'
2020-09-28T12:47:12,827   adding 'AdaptivePELE/validator/__init__.py'
2020-09-28T12:47:12,828   adding 'AdaptivePELE/validator/controlFileValidator.py'
2020-09-28T12:47:12,830   adding 'AdaptivePELE/validator/validatorBlockNames.py'
2020-09-28T12:47:12,832   adding 'AdaptivePELE-1.6.3.dist-info/METADATA'
2020-09-28T12:47:12,833   adding 'AdaptivePELE-1.6.3.dist-info/WHEEL'
2020-09-28T12:47:12,834   adding 'AdaptivePELE-1.6.3.dist-info/top_level.txt'
2020-09-28T12:47:12,835   adding 'AdaptivePELE-1.6.3.dist-info/RECORD'
2020-09-28T12:47:12,861   removing build/bdist.linux-armv7l/wheel
2020-09-28T12:47:13,201   Building wheel for adaptivepele (setup.py): finished with status 'done'
2020-09-28T12:47:13,220   Created wheel for adaptivepele: filename=AdaptivePELE-1.6.3-cp37-cp37m-linux_armv7l.whl size=1621659 sha256=fc72f5016a0826fbe3b3a251f574c128cfffc1e1080f6ef21d32ae9134214087
2020-09-28T12:47:13,221   Stored in directory: /tmp/pip-ephem-wheel-cache-a8thohwr/wheels/74/fd/09/3226aa9dcc9ceaa6c4a0b7b87d7b80a475f165aa59e61eb4cf
2020-09-28T12:47:13,223 Successfully built adaptivepele
2020-09-28T12:47:13,283 Removed build tracker: '/tmp/pip-req-tracker-ded2ig9a'