2020-10-03T12:09:29,840 Created temporary directory: /tmp/pip-ephem-wheel-cache-nit16ip5
2020-10-03T12:09:29,843 Created temporary directory: /tmp/pip-req-tracker-uodrj92g
2020-10-03T12:09:29,843 Initialized build tracking at /tmp/pip-req-tracker-uodrj92g
2020-10-03T12:09:29,844 Created build tracker: /tmp/pip-req-tracker-uodrj92g
2020-10-03T12:09:29,844 Entered build tracker: /tmp/pip-req-tracker-uodrj92g
2020-10-03T12:09:29,844 Created temporary directory: /tmp/pip-wheel-l3ip60kl
2020-10-03T12:09:29,853 1 location(s) to search for versions of toil-cvflag:
2020-10-03T12:09:29,853 * https://pypi.org/simple/toil-cvflag/
2020-10-03T12:09:29,853 Fetching project page and analyzing links: https://pypi.org/simple/toil-cvflag/
2020-10-03T12:09:29,854 Getting page https://pypi.org/simple/toil-cvflag/
2020-10-03T12:09:29,855 Found index url https://pypi.org/simple
2020-10-03T12:09:29,944   Skipping link: none of the wheel's tags match: py2-none-any: https://files.pythonhosted.org/packages/26/79/66da42ae625f66c41775a44b2cae4ccd7e3d96bb1dfe0eb435b69184a2dc/toil_cvflag-1.0.0-py2-none-any.whl#sha256=d6fe362adea50a0e40de89c30ced882f1a9e8c91d3b6ccce70f9ec326ede0305 (from https://pypi.org/simple/toil-cvflag/)
2020-10-03T12:09:29,945   Found link https://files.pythonhosted.org/packages/5a/55/e0074e6a0feae8c5631c7e5becaca834aac285832607566ce745496fa7b6/toil_cvflag-1.0.0.tar.gz#sha256=60b93ce294988d5d6e8646e7f36a4a543665a4c48a1702c7888952917d2780b5 (from https://pypi.org/simple/toil-cvflag/), version: 1.0.0
2020-10-03T12:09:29,945 Given no hashes to check 1 links for project 'toil-cvflag': discarding no candidates
2020-10-03T12:09:29,946 Using version 1.0.0 (newest of versions: 1.0.0)
2020-10-03T12:09:29,950 Collecting toil-cvflag==1.0.0
2020-10-03T12:09:29,952   Created temporary directory: /tmp/pip-unpack-9057d_n4
2020-10-03T12:09:29,990   Downloading toil_cvflag-1.0.0.tar.gz (22 kB)
2020-10-03T12:09:30,069   Added toil-cvflag==1.0.0 from https://files.pythonhosted.org/packages/5a/55/e0074e6a0feae8c5631c7e5becaca834aac285832607566ce745496fa7b6/toil_cvflag-1.0.0.tar.gz#sha256=60b93ce294988d5d6e8646e7f36a4a543665a4c48a1702c7888952917d2780b5 to build tracker '/tmp/pip-req-tracker-uodrj92g'
2020-10-03T12:09:30,070     Running setup.py (path:/tmp/pip-wheel-l3ip60kl/toil-cvflag/setup.py) egg_info for package toil-cvflag
2020-10-03T12:09:30,071     Created temporary directory: /tmp/pip-pip-egg-info-wkkms782
2020-10-03T12:09:30,071     Running command python setup.py egg_info
2020-10-03T12:09:33,559     running egg_info
2020-10-03T12:09:33,562     creating /tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info
2020-10-03T12:09:33,563     writing /tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/PKG-INFO
2020-10-03T12:09:33,565     writing dependency_links to /tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/dependency_links.txt
2020-10-03T12:09:33,567     writing entry points to /tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/entry_points.txt
2020-10-03T12:09:33,568     writing requirements to /tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/requires.txt
2020-10-03T12:09:33,569     writing top-level names to /tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/top_level.txt
2020-10-03T12:09:33,571     writing manifest file '/tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/SOURCES.txt'
2020-10-03T12:09:33,710     reading manifest file '/tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/SOURCES.txt'
2020-10-03T12:09:33,712     reading manifest template 'MANIFEST.in'
2020-10-03T12:09:33,713     warning: no previously-included files matching '*.dylib' found anywhere in distribution
2020-10-03T12:09:33,714     warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2020-10-03T12:09:33,714     warning: no previously-included files matching '*.so' found anywhere in distribution
2020-10-03T12:09:33,715     warning: no previously-included files matching '__pycache__' found anywhere in distribution
2020-10-03T12:09:33,715     warning: no files found matching 'VERSION'
2020-10-03T12:09:33,725     writing manifest file '/tmp/pip-pip-egg-info-wkkms782/toil_cvflag.egg-info/SOURCES.txt'
2020-10-03T12:09:33,804   Source in /tmp/pip-wheel-l3ip60kl/toil-cvflag has version 1.0.0, which satisfies requirement toil-cvflag==1.0.0 from https://files.pythonhosted.org/packages/5a/55/e0074e6a0feae8c5631c7e5becaca834aac285832607566ce745496fa7b6/toil_cvflag-1.0.0.tar.gz#sha256=60b93ce294988d5d6e8646e7f36a4a543665a4c48a1702c7888952917d2780b5
2020-10-03T12:09:33,805   Removed toil-cvflag==1.0.0 from https://files.pythonhosted.org/packages/5a/55/e0074e6a0feae8c5631c7e5becaca834aac285832607566ce745496fa7b6/toil_cvflag-1.0.0.tar.gz#sha256=60b93ce294988d5d6e8646e7f36a4a543665a4c48a1702c7888952917d2780b5 from build tracker '/tmp/pip-req-tracker-uodrj92g'
2020-10-03T12:09:33,806 Building wheels for collected packages: toil-cvflag
2020-10-03T12:09:33,811   Created temporary directory: /tmp/pip-wheel-n4o1rhdq
2020-10-03T12:09:33,812   Building wheel for toil-cvflag (setup.py): started
2020-10-03T12:09:33,812   Destination directory: /tmp/pip-wheel-n4o1rhdq
2020-10-03T12:09:33,812   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-l3ip60kl/toil-cvflag/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-l3ip60kl/toil-cvflag/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-n4o1rhdq
2020-10-03T12:09:35,243   running bdist_wheel
2020-10-03T12:09:35,245   running build
2020-10-03T12:09:35,246   running build_py
2020-10-03T12:09:35,365   creating build
2020-10-03T12:09:35,365   creating build/lib
2020-10-03T12:09:35,366   creating build/lib/tests
2020-10-03T12:09:35,368   copying tests/test_cli.py -> build/lib/tests
2020-10-03T12:09:35,370   copying tests/test_version.py -> build/lib/tests
2020-10-03T12:09:35,372   copying tests/test_utils.py -> build/lib/tests
2020-10-03T12:09:35,374   copying tests/utils.py -> build/lib/tests
2020-10-03T12:09:35,376   copying tests/__init__.py -> build/lib/tests
2020-10-03T12:09:35,378   copying tests/test_commands.py -> build/lib/tests
2020-10-03T12:09:35,380   copying tests/test_validators.py -> build/lib/tests
2020-10-03T12:09:35,383   creating build/lib/toil_cvflag
2020-10-03T12:09:35,383   copying toil_cvflag/__main__.py -> build/lib/toil_cvflag
2020-10-03T12:09:35,386   copying toil_cvflag/exceptions.py -> build/lib/toil_cvflag
2020-10-03T12:09:35,387   copying toil_cvflag/commands.py -> build/lib/toil_cvflag
2020-10-03T12:09:35,390   copying toil_cvflag/utils.py -> build/lib/toil_cvflag
2020-10-03T12:09:35,392   copying toil_cvflag/__init__.py -> build/lib/toil_cvflag
2020-10-03T12:09:35,394   copying toil_cvflag/cli.py -> build/lib/toil_cvflag
2020-10-03T12:09:35,397   copying toil_cvflag/validators.py -> build/lib/toil_cvflag
2020-10-03T12:09:35,399   running egg_info
2020-10-03T12:09:35,402   writing toil_cvflag.egg-info/PKG-INFO
2020-10-03T12:09:35,405   writing dependency_links to toil_cvflag.egg-info/dependency_links.txt
2020-10-03T12:09:35,407   writing entry points to toil_cvflag.egg-info/entry_points.txt
2020-10-03T12:09:35,409   writing requirements to toil_cvflag.egg-info/requires.txt
2020-10-03T12:09:35,410   writing top-level names to toil_cvflag.egg-info/top_level.txt
2020-10-03T12:09:35,418   reading manifest file 'toil_cvflag.egg-info/SOURCES.txt'
2020-10-03T12:09:35,421   reading manifest template 'MANIFEST.in'
2020-10-03T12:09:35,422   warning: no previously-included files matching '*.dylib' found anywhere in distribution
2020-10-03T12:09:35,423   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2020-10-03T12:09:35,424   warning: no previously-included files matching '*.so' found anywhere in distribution
2020-10-03T12:09:35,425   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2020-10-03T12:09:35,425   warning: no files found matching 'VERSION'
2020-10-03T12:09:35,439   writing manifest file 'toil_cvflag.egg-info/SOURCES.txt'
2020-10-03T12:09:35,442   copying toil_cvflag/VERSION -> build/lib/toil_cvflag
2020-10-03T12:09:35,445   creating build/lib/toil_cvflag/caveman_utils
2020-10-03T12:09:35,446   copying toil_cvflag/caveman_utils/cgpFlagCaVEMan_custom.pl -> build/lib/toil_cvflag/caveman_utils
2020-10-03T12:09:35,452   copying toil_cvflag/caveman_utils/flag.to.vcf.custom.convert.ini -> build/lib/toil_cvflag/caveman_utils
2020-10-03T12:09:35,455   copying toil_cvflag/caveman_utils/flag.vcf.custom.config.ini -> build/lib/toil_cvflag/caveman_utils
2020-10-03T12:09:35,459   creating build/lib/toil_cvflag/data
2020-10-03T12:09:35,460   copying toil_cvflag/data/README.md -> build/lib/toil_cvflag/data
2020-10-03T12:09:35,467   installing to build/bdist.linux-armv7l/wheel
2020-10-03T12:09:35,468   running install
2020-10-03T12:09:35,469   running install_lib
2020-10-03T12:09:35,474   creating build/bdist.linux-armv7l
2020-10-03T12:09:35,475   creating build/bdist.linux-armv7l/wheel
2020-10-03T12:09:35,477   creating build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,478   copying build/lib/tests/test_cli.py -> build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,481   copying build/lib/tests/test_version.py -> build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,483   copying build/lib/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,486   copying build/lib/tests/utils.py -> build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,488   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,490   copying build/lib/tests/test_commands.py -> build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,492   copying build/lib/tests/test_validators.py -> build/bdist.linux-armv7l/wheel/tests
2020-10-03T12:09:35,496   creating build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,497   copying build/lib/toil_cvflag/__main__.py -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,499   copying build/lib/toil_cvflag/VERSION -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,503   creating build/bdist.linux-armv7l/wheel/toil_cvflag/data
2020-10-03T12:09:35,504   copying build/lib/toil_cvflag/data/README.md -> build/bdist.linux-armv7l/wheel/toil_cvflag/data
2020-10-03T12:09:35,506   copying build/lib/toil_cvflag/exceptions.py -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,509   copying build/lib/toil_cvflag/commands.py -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,512   creating build/bdist.linux-armv7l/wheel/toil_cvflag/caveman_utils
2020-10-03T12:09:35,514   copying build/lib/toil_cvflag/caveman_utils/cgpFlagCaVEMan_custom.pl -> build/bdist.linux-armv7l/wheel/toil_cvflag/caveman_utils
2020-10-03T12:09:35,517   copying build/lib/toil_cvflag/caveman_utils/flag.to.vcf.custom.convert.ini -> build/bdist.linux-armv7l/wheel/toil_cvflag/caveman_utils
2020-10-03T12:09:35,520   copying build/lib/toil_cvflag/caveman_utils/flag.vcf.custom.config.ini -> build/bdist.linux-armv7l/wheel/toil_cvflag/caveman_utils
2020-10-03T12:09:35,523   copying build/lib/toil_cvflag/utils.py -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,525   copying build/lib/toil_cvflag/__init__.py -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,528   copying build/lib/toil_cvflag/cli.py -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,530   copying build/lib/toil_cvflag/validators.py -> build/bdist.linux-armv7l/wheel/toil_cvflag
2020-10-03T12:09:35,532   running install_egg_info
2020-10-03T12:09:35,536   Copying toil_cvflag.egg-info to build/bdist.linux-armv7l/wheel/toil_cvflag-1.0.0-py3.7.egg-info
2020-10-03T12:09:35,553   running install_scripts
2020-10-03T12:09:35,597   creating build/bdist.linux-armv7l/wheel/toil_cvflag-1.0.0.dist-info/WHEEL
2020-10-03T12:09:35,600   creating '/tmp/pip-wheel-n4o1rhdq/toil_cvflag-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-10-03T12:09:35,604   adding 'tests/__init__.py'
2020-10-03T12:09:35,605   adding 'tests/test_cli.py'
2020-10-03T12:09:35,607   adding 'tests/test_commands.py'
2020-10-03T12:09:35,609   adding 'tests/test_utils.py'
2020-10-03T12:09:35,610   adding 'tests/test_validators.py'
2020-10-03T12:09:35,612   adding 'tests/test_version.py'
2020-10-03T12:09:35,613   adding 'tests/utils.py'
2020-10-03T12:09:35,615   adding 'toil_cvflag/VERSION'
2020-10-03T12:09:35,617   adding 'toil_cvflag/__init__.py'
2020-10-03T12:09:35,618   adding 'toil_cvflag/__main__.py'
2020-10-03T12:09:35,620   adding 'toil_cvflag/cli.py'
2020-10-03T12:09:35,622   adding 'toil_cvflag/commands.py'
2020-10-03T12:09:35,624   adding 'toil_cvflag/exceptions.py'
2020-10-03T12:09:35,625   adding 'toil_cvflag/utils.py'
2020-10-03T12:09:35,627   adding 'toil_cvflag/validators.py'
2020-10-03T12:09:35,634   adding 'toil_cvflag/caveman_utils/cgpFlagCaVEMan_custom.pl'
2020-10-03T12:09:35,636   adding 'toil_cvflag/caveman_utils/flag.to.vcf.custom.convert.ini'
2020-10-03T12:09:35,638   adding 'toil_cvflag/caveman_utils/flag.vcf.custom.config.ini'
2020-10-03T12:09:35,640   adding 'toil_cvflag/data/README.md'
2020-10-03T12:09:35,642   adding 'toil_cvflag-1.0.0.dist-info/METADATA'
2020-10-03T12:09:35,643   adding 'toil_cvflag-1.0.0.dist-info/WHEEL'
2020-10-03T12:09:35,643   adding 'toil_cvflag-1.0.0.dist-info/entry_points.txt'
2020-10-03T12:09:35,644   adding 'toil_cvflag-1.0.0.dist-info/top_level.txt'
2020-10-03T12:09:35,645   adding 'toil_cvflag-1.0.0.dist-info/RECORD'
2020-10-03T12:09:35,646   removing build/bdist.linux-armv7l/wheel
2020-10-03T12:09:35,730   Building wheel for toil-cvflag (setup.py): finished with status 'done'
2020-10-03T12:09:35,732   Created wheel for toil-cvflag: filename=toil_cvflag-1.0.0-py3-none-any.whl size=25319 sha256=f324e3982ce290c4295f34c963e342ba625be05c4a245941ed891b494324a54e
2020-10-03T12:09:35,733   Stored in directory: /tmp/pip-ephem-wheel-cache-nit16ip5/wheels/72/04/23/b8a01226b7cc91f314e152a3812eb85c313d8dad2193d931f3
2020-10-03T12:09:35,735 Successfully built toil-cvflag
2020-10-03T12:09:35,740 Removed build tracker: '/tmp/pip-req-tracker-uodrj92g'