2020-10-03T12:36:34,985 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2020-10-03T12:36:35,624 Created temporary directory: /tmp/pip-ephem-wheel-cache-zymbl_y3 2020-10-03T12:36:35,628 Created temporary directory: /tmp/pip-req-tracker-gi5k0rnb 2020-10-03T12:36:35,629 Initialized build tracking at /tmp/pip-req-tracker-gi5k0rnb 2020-10-03T12:36:35,629 Created build tracker: /tmp/pip-req-tracker-gi5k0rnb 2020-10-03T12:36:35,630 Entered build tracker: /tmp/pip-req-tracker-gi5k0rnb 2020-10-03T12:36:35,631 Created temporary directory: /tmp/pip-wheel-yzi32pf6 2020-10-03T12:36:35,648 1 location(s) to search for versions of scipion-app: 2020-10-03T12:36:35,648 * https://pypi.org/simple/scipion-app/ 2020-10-03T12:36:35,648 Fetching project page and analyzing links: https://pypi.org/simple/scipion-app/ 2020-10-03T12:36:35,650 Getting page https://pypi.org/simple/scipion-app/ 2020-10-03T12:36:35,654 Found index url https://pypi.org/simple 2020-10-03T12:36:35,948 Found link https://files.pythonhosted.org/packages/66/64/85ffad3617ea776896aa24dfcb51d367c193220dd174de03ef85fd6edfb8/scipion-app-3.0.1a1.tar.gz#sha256=3fecc093f7a45d37a1334e9407335e998f147914ca979a3a03a1cb75550fee82 (from https://pypi.org/simple/scipion-app/), version: 3.0.1a1 2020-10-03T12:36:35,949 Found link https://files.pythonhosted.org/packages/f7/0f/1b7c5a73e2dc09c3cda15b2d74cfe148d8dde4d1e2a76f0a78d0a5bdfde2/scipion-app-3.0.1b1.tar.gz#sha256=02b04def46f6ca4da2d3ad9281a5ec350c61e2ac9d94079f039cf408069011a7 (from https://pypi.org/simple/scipion-app/), version: 3.0.1b1 2020-10-03T12:36:35,950 Found link https://files.pythonhosted.org/packages/5e/b0/42badd16859b81e21e22bfac06f3e894670a9e72880f9ec31311b4472044/scipion-app-3.0.1b3.tar.gz#sha256=2e41a119c154c08af28f6d1d861737cf51c21a9ac450ca5537662c600c06011f (from https://pypi.org/simple/scipion-app/), version: 3.0.1b3 2020-10-03T12:36:35,951 Found link https://files.pythonhosted.org/packages/f8/ff/37eb320a0e119c42601df5d2de4bc774c24f2a4ee75415b8e69bb33f8d48/scipion-app-3.0.1.tar.gz#sha256=411c3325a836fdf52ce84d348292472f31969a10708e272188732f5d2ec8f300 (from https://pypi.org/simple/scipion-app/), version: 3.0.1 2020-10-03T12:36:35,951 Found link https://files.pythonhosted.org/packages/45/3b/71079f1a346fd9851fdb14d3021444183072a03eec00c4ec1ee0c501f2cb/scipion-app-3.0.2.tar.gz#sha256=9b91efe665eb3478ebe8f2c1b19ce3be7910a69864e957c04cc6b7ca8390b1d9 (from https://pypi.org/simple/scipion-app/), version: 3.0.2 2020-10-03T12:36:35,952 Found link https://files.pythonhosted.org/packages/80/4f/d2ab1ca12d4121d87a5321a41a25af6ae6d50f470ca61586c7b0041fb0ff/scipion-app-3.0.3.tar.gz#sha256=0aac3aa97a0634422dee2bf702bc7dae8d941a80c4e91a699b9b10180790e36b (from https://pypi.org/simple/scipion-app/), version: 3.0.3 2020-10-03T12:36:35,953 Found link https://files.pythonhosted.org/packages/71/6f/17dd5727fbd6e9a0279c3c6e3bbc171d085d3c7495232f4dd6fdd623b958/scipion-app-3.0.4.tar.gz#sha256=96f0157ff547dfef55d92911c93ee4ffbbaa479c3a18784762d057bc8af22957 (from https://pypi.org/simple/scipion-app/), version: 3.0.4 2020-10-03T12:36:35,963 Given no hashes to check 1 links for project 'scipion-app': discarding no candidates 2020-10-03T12:36:35,964 Using version 3.0.4 (newest of versions: 3.0.4) 2020-10-03T12:36:35,971 Collecting scipion-app==3.0.4 2020-10-03T12:36:35,976 Created temporary directory: /tmp/pip-unpack-wguufm9s 2020-10-03T12:36:36,194 Downloading scipion-app-3.0.4.tar.gz (72 kB) 2020-10-03T12:36:36,437 Added scipion-app==3.0.4 from https://files.pythonhosted.org/packages/71/6f/17dd5727fbd6e9a0279c3c6e3bbc171d085d3c7495232f4dd6fdd623b958/scipion-app-3.0.4.tar.gz#sha256=96f0157ff547dfef55d92911c93ee4ffbbaa479c3a18784762d057bc8af22957 to build tracker '/tmp/pip-req-tracker-gi5k0rnb' 2020-10-03T12:36:36,439 Running setup.py (path:/tmp/pip-wheel-yzi32pf6/scipion-app/setup.py) egg_info for package scipion-app 2020-10-03T12:36:36,440 Created temporary directory: /tmp/pip-pip-egg-info-c6s5vf6q 2020-10-03T12:36:36,441 Running command python setup.py egg_info 2020-10-03T12:36:38,477 running egg_info 2020-10-03T12:36:38,482 creating /tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info 2020-10-03T12:36:38,485 writing entry points to /tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/entry_points.txt 2020-10-03T12:36:38,487 writing /tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/PKG-INFO 2020-10-03T12:36:38,491 writing requirements to /tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/requires.txt 2020-10-03T12:36:38,493 writing top-level names to /tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/top_level.txt 2020-10-03T12:36:38,495 writing dependency_links to /tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/dependency_links.txt 2020-10-03T12:36:38,498 writing manifest file '/tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/SOURCES.txt' 2020-10-03T12:36:38,813 reading manifest file '/tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/SOURCES.txt' 2020-10-03T12:36:38,816 reading manifest template 'MANIFEST.in' 2020-10-03T12:36:38,820 warning: no files found matching 'LICENSE' 2020-10-03T12:36:38,826 writing manifest file '/tmp/pip-pip-egg-info-c6s5vf6q/scipion_app.egg-info/SOURCES.txt' 2020-10-03T12:36:38,953 Source in /tmp/pip-wheel-yzi32pf6/scipion-app has version 3.0.4, which satisfies requirement scipion-app==3.0.4 from https://files.pythonhosted.org/packages/71/6f/17dd5727fbd6e9a0279c3c6e3bbc171d085d3c7495232f4dd6fdd623b958/scipion-app-3.0.4.tar.gz#sha256=96f0157ff547dfef55d92911c93ee4ffbbaa479c3a18784762d057bc8af22957 2020-10-03T12:36:38,956 Removed scipion-app==3.0.4 from https://files.pythonhosted.org/packages/71/6f/17dd5727fbd6e9a0279c3c6e3bbc171d085d3c7495232f4dd6fdd623b958/scipion-app-3.0.4.tar.gz#sha256=96f0157ff547dfef55d92911c93ee4ffbbaa479c3a18784762d057bc8af22957 from build tracker '/tmp/pip-req-tracker-gi5k0rnb' 2020-10-03T12:36:38,959 Building wheels for collected packages: scipion-app 2020-10-03T12:36:38,966 Created temporary directory: /tmp/pip-wheel-obvmengf 2020-10-03T12:36:38,967 Building wheel for scipion-app (setup.py): started 2020-10-03T12:36:38,967 Destination directory: /tmp/pip-wheel-obvmengf 2020-10-03T12:36:38,968 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-yzi32pf6/scipion-app/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-yzi32pf6/scipion-app/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-obvmengf 2020-10-03T12:36:41,030 running bdist_wheel 2020-10-03T12:36:41,044 running build 2020-10-03T12:36:41,045 running build_py 2020-10-03T12:36:41,340 creating build 2020-10-03T12:36:41,341 creating build/lib 2020-10-03T12:36:41,342 creating build/lib/scipion 2020-10-03T12:36:41,344 copying scipion/guiplugin.py -> build/lib/scipion 2020-10-03T12:36:41,347 copying scipion/__main__.py -> build/lib/scipion 2020-10-03T12:36:41,351 copying scipion/__init__.py -> build/lib/scipion 2020-10-03T12:36:41,354 copying scipion/utils.py -> build/lib/scipion 2020-10-03T12:36:41,357 copying scipion/constants.py -> build/lib/scipion 2020-10-03T12:36:41,362 creating build/lib/scipion/install 2020-10-03T12:36:41,364 copying scipion/install/inspect-plugins.py -> build/lib/scipion/install 2020-10-03T12:36:41,368 copying scipion/install/change_rpath.py -> build/lib/scipion/install 2020-10-03T12:36:41,371 copying scipion/install/install_plugin.py -> build/lib/scipion/install 2020-10-03T12:36:41,376 copying scipion/install/clean.py -> build/lib/scipion/install 2020-10-03T12:36:41,379 copying scipion/install/tar.py -> build/lib/scipion/install 2020-10-03T12:36:41,382 copying scipion/install/upgrade_release.py -> build/lib/scipion/install 2020-10-03T12:36:41,385 copying scipion/install/__init__.py -> build/lib/scipion/install 2020-10-03T12:36:41,388 copying scipion/install/plugin_manager.py -> build/lib/scipion/install 2020-10-03T12:36:41,394 copying scipion/install/update_manager.py -> build/lib/scipion/install 2020-10-03T12:36:41,398 copying scipion/install/funcs.py -> build/lib/scipion/install 2020-10-03T12:36:41,403 copying scipion/install/plugin_funcs.py -> build/lib/scipion/install 2020-10-03T12:36:41,407 copying scipion/install/find_deps.py -> build/lib/scipion/install 2020-10-03T12:36:41,412 creating build/lib/scipion/scripts 2020-10-03T12:36:41,414 copying scipion/scripts/kickoff.py -> build/lib/scipion/scripts 2020-10-03T12:36:41,420 copying scipion/scripts/__init__.py -> build/lib/scipion/scripts 2020-10-03T12:36:41,423 copying scipion/scripts/tutorial.py -> build/lib/scipion/scripts 2020-10-03T12:36:41,428 copying scipion/scripts/config.py -> build/lib/scipion/scripts 2020-10-03T12:36:41,433 copying scipion/scripts/fontbrowser.py -> build/lib/scipion/scripts 2020-10-03T12:36:41,443 creating build/lib/scipion/templates 2020-10-03T12:36:41,445 copying scipion/templates/scipionbox.template -> build/lib/scipion/templates 2020-10-03T12:36:41,450 copying scipion/templates/protocols.template -> build/lib/scipion/templates 2020-10-03T12:36:41,455 copying scipion/templates/scipion.template -> build/lib/scipion/templates 2020-10-03T12:36:41,460 copying scipion/templates/hosts.template -> build/lib/scipion/templates 2020-10-03T12:36:41,465 copying scipion/templates/workflow_tutorial_intro.json -> build/lib/scipion/templates 2020-10-03T12:36:41,470 copying scipion/templates/workflow_betagal2.json -> build/lib/scipion/templates 2020-10-03T12:36:41,475 copying scipion/templates/workflow_betagal1.json -> build/lib/scipion/templates 2020-10-03T12:36:41,492 installing to build/bdist.linux-armv7l/wheel 2020-10-03T12:36:41,493 running install 2020-10-03T12:36:41,495 running install_lib 2020-10-03T12:36:41,504 creating build/bdist.linux-armv7l 2020-10-03T12:36:41,505 creating build/bdist.linux-armv7l/wheel 2020-10-03T12:36:41,508 creating build/bdist.linux-armv7l/wheel/scipion 2020-10-03T12:36:41,512 creating build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,513 copying build/lib/scipion/install/inspect-plugins.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,518 copying build/lib/scipion/install/change_rpath.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,523 copying build/lib/scipion/install/install_plugin.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,528 copying build/lib/scipion/install/clean.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,531 copying build/lib/scipion/install/tar.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,535 copying build/lib/scipion/install/upgrade_release.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,539 copying build/lib/scipion/install/__init__.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,543 copying build/lib/scipion/install/plugin_manager.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,550 copying build/lib/scipion/install/update_manager.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,554 copying build/lib/scipion/install/funcs.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,560 copying build/lib/scipion/install/plugin_funcs.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,565 copying build/lib/scipion/install/find_deps.py -> build/bdist.linux-armv7l/wheel/scipion/install 2020-10-03T12:36:41,570 copying build/lib/scipion/guiplugin.py -> build/bdist.linux-armv7l/wheel/scipion 2020-10-03T12:36:41,574 copying build/lib/scipion/__main__.py -> build/bdist.linux-armv7l/wheel/scipion 2020-10-03T12:36:41,579 creating build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,581 copying build/lib/scipion/templates/workflow_tutorial_intro.json -> build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,586 copying build/lib/scipion/templates/scipionbox.template -> build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,591 copying build/lib/scipion/templates/protocols.template -> build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,595 copying build/lib/scipion/templates/scipion.template -> build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,600 copying build/lib/scipion/templates/hosts.template -> build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,604 copying build/lib/scipion/templates/workflow_betagal2.json -> build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,608 copying build/lib/scipion/templates/workflow_betagal1.json -> build/bdist.linux-armv7l/wheel/scipion/templates 2020-10-03T12:36:41,613 copying build/lib/scipion/__init__.py -> build/bdist.linux-armv7l/wheel/scipion 2020-10-03T12:36:41,617 copying build/lib/scipion/utils.py -> build/bdist.linux-armv7l/wheel/scipion 2020-10-03T12:36:41,621 creating build/bdist.linux-armv7l/wheel/scipion/scripts 2020-10-03T12:36:41,623 copying build/lib/scipion/scripts/kickoff.py -> build/bdist.linux-armv7l/wheel/scipion/scripts 2020-10-03T12:36:41,627 copying build/lib/scipion/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/scipion/scripts 2020-10-03T12:36:41,630 copying build/lib/scipion/scripts/tutorial.py -> build/bdist.linux-armv7l/wheel/scipion/scripts 2020-10-03T12:36:41,634 copying build/lib/scipion/scripts/config.py -> build/bdist.linux-armv7l/wheel/scipion/scripts 2020-10-03T12:36:41,638 copying build/lib/scipion/scripts/fontbrowser.py -> build/bdist.linux-armv7l/wheel/scipion/scripts 2020-10-03T12:36:41,642 copying build/lib/scipion/constants.py -> build/bdist.linux-armv7l/wheel/scipion 2020-10-03T12:36:41,645 running install_egg_info 2020-10-03T12:36:41,685 running egg_info 2020-10-03T12:36:41,686 writing scipion_app.egg-info/PKG-INFO 2020-10-03T12:36:41,690 writing dependency_links to scipion_app.egg-info/dependency_links.txt 2020-10-03T12:36:41,693 writing entry points to scipion_app.egg-info/entry_points.txt 2020-10-03T12:36:41,694 writing requirements to scipion_app.egg-info/requires.txt 2020-10-03T12:36:41,696 writing top-level names to scipion_app.egg-info/top_level.txt 2020-10-03T12:36:41,707 reading manifest file 'scipion_app.egg-info/SOURCES.txt' 2020-10-03T12:36:41,712 reading manifest template 'MANIFEST.in' 2020-10-03T12:36:41,715 warning: no files found matching 'LICENSE' 2020-10-03T12:36:41,723 writing manifest file 'scipion_app.egg-info/SOURCES.txt' 2020-10-03T12:36:41,726 Copying scipion_app.egg-info to build/bdist.linux-armv7l/wheel/scipion_app-3.0.4-py3.5.egg-info 2020-10-03T12:36:41,745 running install_scripts 2020-10-03T12:36:41,903 creating build/bdist.linux-armv7l/wheel/scipion_app-3.0.4.dist-info/WHEEL 2020-10-03T12:36:42,209 Building wheel for scipion-app (setup.py): finished with status 'done' 2020-10-03T12:36:42,214 Created wheel for scipion-app: filename=scipion_app-3.0.4-py3-none-any.whl size=74683 sha256=6aaa84bd97fec9468e59d9a8cbff472313d56fcac717ee644001c8319540df00 2020-10-03T12:36:42,215 Stored in directory: /tmp/pip-ephem-wheel-cache-zymbl_y3/wheels/2a/9c/7d/8bd88276c6f13fe0f974c3bd90044ad008173cf3e5d741738e 2020-10-03T12:36:42,218 Successfully built scipion-app 2020-10-03T12:36:42,358 Removed build tracker: '/tmp/pip-req-tracker-gi5k0rnb'