2020-10-06T22:44:49,515 Created temporary directory: /tmp/pip-ephem-wheel-cache-zx095xcc 2020-10-06T22:44:49,518 Created temporary directory: /tmp/pip-req-tracker-mjd4zv36 2020-10-06T22:44:49,518 Initialized build tracking at /tmp/pip-req-tracker-mjd4zv36 2020-10-06T22:44:49,518 Created build tracker: /tmp/pip-req-tracker-mjd4zv36 2020-10-06T22:44:49,519 Entered build tracker: /tmp/pip-req-tracker-mjd4zv36 2020-10-06T22:44:49,519 Created temporary directory: /tmp/pip-wheel-y4go6ouq 2020-10-06T22:44:49,527 1 location(s) to search for versions of metawibele: 2020-10-06T22:44:49,527 * https://pypi.org/simple/metawibele/ 2020-10-06T22:44:49,528 Fetching project page and analyzing links: https://pypi.org/simple/metawibele/ 2020-10-06T22:44:49,528 Getting page https://pypi.org/simple/metawibele/ 2020-10-06T22:44:49,529 Found index url https://pypi.org/simple 2020-10-06T22:44:49,615 Found link https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 (from https://pypi.org/simple/metawibele/), version: 0.3.5 2020-10-06T22:44:49,615 Found link https://files.pythonhosted.org/packages/c8/13/b19f1456a883f66cbe84a9994809a7b474c95920e502ab105b350d4a0d76/metawibele-0.3.6.tar.gz#sha256=801791f1cb8c79b56b2c484829304330894de9814a805405ecf715cd7cd30763 (from https://pypi.org/simple/metawibele/), version: 0.3.6 2020-10-06T22:44:49,615 Found link https://files.pythonhosted.org/packages/7c/19/af84f2863d296edd894ff917a516fabb124e1921b4ca6d5bc9fa0fffb969/metawibele-0.3.7.tar.gz#sha256=26607eb78cf3bf472f5dc45577bab9db80764ee5f08482a18feb2f235e1403b0 (from https://pypi.org/simple/metawibele/), version: 0.3.7 2020-10-06T22:44:49,616 Found link https://files.pythonhosted.org/packages/c4/35/1d22d02f5576d1aa6f5e8c82ad8ff231d9e1364c56e10554cff9dab80dc0/metawibele-0.3.8.tar.gz#sha256=6b3aa05104b5be76014d82a9ff92439ba798a9e3be501fac37b5276d05e27a8d (from https://pypi.org/simple/metawibele/), version: 0.3.8 2020-10-06T22:44:49,620 Given no hashes to check 1 links for project 'metawibele': discarding no candidates 2020-10-06T22:44:49,621 Using version 0.3.8 (newest of versions: 0.3.8) 2020-10-06T22:44:49,624 Collecting metawibele==0.3.8 2020-10-06T22:44:49,626 Created temporary directory: /tmp/pip-unpack-zslsrv4e 2020-10-06T22:44:49,664 Downloading metawibele-0.3.8.tar.gz (81.2 MB) 2020-10-06T22:45:00,775 Added metawibele==0.3.8 from https://files.pythonhosted.org/packages/c4/35/1d22d02f5576d1aa6f5e8c82ad8ff231d9e1364c56e10554cff9dab80dc0/metawibele-0.3.8.tar.gz#sha256=6b3aa05104b5be76014d82a9ff92439ba798a9e3be501fac37b5276d05e27a8d to build tracker '/tmp/pip-req-tracker-mjd4zv36' 2020-10-06T22:45:00,777 Running setup.py (path:/tmp/pip-wheel-y4go6ouq/metawibele/setup.py) egg_info for package metawibele 2020-10-06T22:45:00,777 Created temporary directory: /tmp/pip-pip-egg-info-lhw2ftud 2020-10-06T22:45:00,778 Running command python setup.py egg_info 2020-10-06T22:45:01,718 running egg_info 2020-10-06T22:45:01,720 creating /tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info 2020-10-06T22:45:01,721 writing /tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info/PKG-INFO 2020-10-06T22:45:01,724 writing dependency_links to /tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info/dependency_links.txt 2020-10-06T22:45:01,728 writing entry points to /tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info/entry_points.txt 2020-10-06T22:45:01,729 writing top-level names to /tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info/top_level.txt 2020-10-06T22:45:01,731 writing manifest file '/tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info/SOURCES.txt' 2020-10-06T22:45:01,881 reading manifest file '/tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info/SOURCES.txt' 2020-10-06T22:45:01,883 reading manifest template 'MANIFEST.in' 2020-10-06T22:45:01,884 warning: no files found matching 'readme.md' 2020-10-06T22:45:01,914 writing manifest file '/tmp/pip-pip-egg-info-lhw2ftud/metawibele.egg-info/SOURCES.txt' 2020-10-06T22:45:01,986 Source in /tmp/pip-wheel-y4go6ouq/metawibele has version 0.3.8, which satisfies requirement metawibele==0.3.8 from https://files.pythonhosted.org/packages/c4/35/1d22d02f5576d1aa6f5e8c82ad8ff231d9e1364c56e10554cff9dab80dc0/metawibele-0.3.8.tar.gz#sha256=6b3aa05104b5be76014d82a9ff92439ba798a9e3be501fac37b5276d05e27a8d 2020-10-06T22:45:01,987 Removed metawibele==0.3.8 from https://files.pythonhosted.org/packages/c4/35/1d22d02f5576d1aa6f5e8c82ad8ff231d9e1364c56e10554cff9dab80dc0/metawibele-0.3.8.tar.gz#sha256=6b3aa05104b5be76014d82a9ff92439ba798a9e3be501fac37b5276d05e27a8d from build tracker '/tmp/pip-req-tracker-mjd4zv36' 2020-10-06T22:45:01,990 Building wheels for collected packages: metawibele 2020-10-06T22:45:01,994 Created temporary directory: /tmp/pip-wheel-1apxb2vc 2020-10-06T22:45:01,995 Building wheel for metawibele (setup.py): started 2020-10-06T22:45:01,995 Destination directory: /tmp/pip-wheel-1apxb2vc 2020-10-06T22:45:01,996 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-y4go6ouq/metawibele/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-y4go6ouq/metawibele/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1apxb2vc 2020-10-06T22:45:02,964 running bdist_wheel 2020-10-06T22:45:02,968 running build 2020-10-06T22:45:02,969 running build_py 2020-10-06T22:45:03,095 creating build 2020-10-06T22:45:03,095 creating build/lib 2020-10-06T22:45:03,096 creating build/lib/metawibele 2020-10-06T22:45:03,097 copying metawibele/__init__.py -> build/lib/metawibele 2020-10-06T22:45:03,098 copying metawibele/utilities.py -> build/lib/metawibele 2020-10-06T22:45:03,101 copying metawibele/check.py -> build/lib/metawibele 2020-10-06T22:45:03,103 copying metawibele/config.py -> build/lib/metawibele 2020-10-06T22:45:03,105 copying metawibele/metawibele.py -> build/lib/metawibele 2020-10-06T22:45:03,108 creating build/lib/metawibele/common 2020-10-06T22:45:03,109 copying metawibele/common/prepare_uniref_annotation.py -> build/lib/metawibele/common 2020-10-06T22:45:03,112 copying metawibele/common/prepare_uniprot_annotation.py -> build/lib/metawibele/common 2020-10-06T22:45:03,115 copying metawibele/common/__init__.py -> build/lib/metawibele/common 2020-10-06T22:45:03,116 copying metawibele/common/filter_clusters.py -> build/lib/metawibele/common 2020-10-06T22:45:03,118 copying metawibele/common/download_config_file.py -> build/lib/metawibele/common 2020-10-06T22:45:03,121 copying metawibele/common/join_family_abundance.py -> build/lib/metawibele/common 2020-10-06T22:45:03,123 copying metawibele/common/abundance_normalization.py -> build/lib/metawibele/common 2020-10-06T22:45:03,126 copying metawibele/common/split_fasta_file.py -> build/lib/metawibele/common 2020-10-06T22:45:03,128 copying metawibele/common/abundance_RPK.py -> build/lib/metawibele/common 2020-10-06T22:45:03,130 copying metawibele/common/filter_prevalence.py -> build/lib/metawibele/common 2020-10-06T22:45:03,133 copying metawibele/common/extract_uniprot_pfam.py -> build/lib/metawibele/common 2020-10-06T22:45:03,135 copying metawibele/common/abundance_smoothing.py -> build/lib/metawibele/common 2020-10-06T22:45:03,138 copying metawibele/common/utils.py -> build/lib/metawibele/common 2020-10-06T22:45:03,141 copying metawibele/common/prepare_domain_databases.py -> build/lib/metawibele/common 2020-10-06T22:45:03,144 copying metawibele/common/download_database.py -> build/lib/metawibele/common 2020-10-06T22:45:03,146 copying metawibele/common/prepare_uniprot_taxonomy.py -> build/lib/metawibele/common 2020-10-06T22:45:03,149 copying metawibele/common/combine_abundance_annotation.py -> build/lib/metawibele/common 2020-10-06T22:45:03,152 copying metawibele/common/extract_abundance_feature_subset.py -> build/lib/metawibele/common 2020-10-06T22:45:03,155 copying metawibele/common/split_family_abundance.py -> build/lib/metawibele/common 2020-10-06T22:45:03,157 copying metawibele/common/transpose.py -> build/lib/metawibele/common 2020-10-06T22:45:03,159 copying metawibele/common/extract_abundance_sample_subset.py -> build/lib/metawibele/common 2020-10-06T22:45:03,162 copying metawibele/common/abundance_filtering.py -> build/lib/metawibele/common 2020-10-06T22:45:03,165 creating build/lib/metawibele/tasks 2020-10-06T22:45:03,166 copying metawibele/tasks/__init__.py -> build/lib/metawibele/tasks 2020-10-06T22:45:03,169 copying metawibele/tasks/prioritization.py -> build/lib/metawibele/tasks 2020-10-06T22:45:03,171 copying metawibele/tasks/characterization.py -> build/lib/metawibele/tasks 2020-10-06T22:45:03,176 creating build/lib/metawibele/prioritize 2020-10-06T22:45:03,177 copying metawibele/prioritize/__init__.py -> build/lib/metawibele/prioritize 2020-10-06T22:45:03,180 copying metawibele/prioritize/finalize_prioritization.py -> build/lib/metawibele/prioritize 2020-10-06T22:45:03,182 copying metawibele/prioritize/filter_prioritization.py -> build/lib/metawibele/prioritize 2020-10-06T22:45:03,185 copying metawibele/prioritize/quantify_prioritization.py -> build/lib/metawibele/prioritize 2020-10-06T22:45:03,190 creating build/lib/metawibele/tools 2020-10-06T22:45:03,191 copying metawibele/tools/__init__.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,193 copying metawibele/tools/extract_complete_ORF_seq.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,195 copying metawibele/tools/gene_catalog_abundance.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,198 copying metawibele/tools/gene_abundance_indexRef.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,200 copying metawibele/tools/extract_non_redundance_seq.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,202 copying metawibele/tools/format_protein_sequences.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,205 copying metawibele/tools/extract_protein_coding_genes.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,207 copying metawibele/tools/extract_cluster_CD_hit.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,210 copying metawibele/tools/combine_gene_sequences.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,212 copying metawibele/tools/preprocessing_tasks.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,215 copying metawibele/tools/format_contig_sequences.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,217 copying metawibele/tools/gene_abundance.py -> build/lib/metawibele/tools 2020-10-06T22:45:03,223 creating build/lib/metawibele/characterize 2020-10-06T22:45:03,224 copying metawibele/characterize/__init__.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,226 copying metawibele/characterize/pfam2go.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,228 copying metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,231 copying metawibele/characterize/psortb_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,234 copying metawibele/characterize/maaslin2_summary.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,237 copying metawibele/characterize/denovo_TM_SP.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,239 copying metawibele/characterize/uniref_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,242 copying metawibele/characterize/msp_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,244 copying metawibele/characterize/interproscan_signalp_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,247 copying metawibele/characterize/uniref_annotator.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,250 copying metawibele/characterize/psortb_protein.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,252 copying metawibele/characterize/ddi_DOMINE_ann.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,255 copying metawibele/characterize/psortb_annotator.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,257 copying metawibele/characterize/sum_to_protein_family_abundance.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,260 copying metawibele/characterize/maaslin2_collection.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,263 copying metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,265 copying metawibele/characterize/mspminer_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,268 copying metawibele/characterize/utils.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,271 copying metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,273 copying metawibele/characterize/uniref_protein.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,276 copying metawibele/characterize/maaslin2_annotator.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,278 copying metawibele/characterize/interproscan_annotator.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,280 copying metawibele/characterize/interproscan_protein.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,283 copying metawibele/characterize/summary_function_annotation.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,286 copying metawibele/characterize/mspminer_msp.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,288 copying metawibele/characterize/interproscan_pfam_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,291 copying metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,293 copying metawibele/characterize/abundance_annotator.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,296 copying metawibele/characterize/interproscan_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,299 copying metawibele/characterize/mspminer_protein.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,301 copying metawibele/characterize/finalize_annotation.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,304 copying metawibele/characterize/maaslin2.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,307 copying metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,309 copying metawibele/characterize/ddi_DOMINE_protein.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,312 copying metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,314 copying metawibele/characterize/interproscan_phobius_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,317 copying metawibele/characterize/summary_protein_uniref_annotation.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,320 copying metawibele/characterize/ddi_DOMINE_protein_family.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,323 copying metawibele/characterize/summary_all_annotation.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,325 copying metawibele/characterize/metadata_format.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,327 copying metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,330 copying metawibele/characterize/uniref_annotator_stat.py -> build/lib/metawibele/characterize 2020-10-06T22:45:03,339 creating build/lib/metawibele/workflows 2020-10-06T22:45:03,340 copying metawibele/workflows/characterize.py -> build/lib/metawibele/workflows 2020-10-06T22:45:03,344 copying metawibele/workflows/prioritize.py -> build/lib/metawibele/workflows 2020-10-06T22:45:03,347 copying metawibele/workflows/preprocess.py -> build/lib/metawibele/workflows 2020-10-06T22:45:03,350 creating build/lib/metawibele/configs 2020-10-06T22:45:03,351 copying metawibele/configs/metawibele.cfg -> build/lib/metawibele/configs 2020-10-06T22:45:03,354 copying metawibele/configs/characterization.cfg -> build/lib/metawibele/configs 2020-10-06T22:45:03,357 copying metawibele/configs/MSPminer_setting.cfg -> build/lib/metawibele/configs 2020-10-06T22:45:03,359 copying metawibele/configs/prioritization.cfg -> build/lib/metawibele/configs 2020-10-06T22:45:03,362 creating build/lib/metawibele/data 2020-10-06T22:45:03,363 creating build/lib/metawibele/data/domain 2020-10-06T22:45:03,364 copying metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,368 copying metawibele/data/domain/pfam_descriptions.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,378 copying metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,384 copying metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,392 copying metawibele/data/domain/gene_ontology.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,398 copying metawibele/data/domain/INTERACTION.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,404 copying metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,458 copying metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,462 copying metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,474 copying metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:03,484 copying metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:04,076 copying metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/lib/metawibele/data/domain 2020-10-06T22:45:04,082 copying metawibele/data/domain/README.txt -> build/lib/metawibele/data/domain 2020-10-06T22:45:04,084 creating build/lib/metawibele/data/uniref 2020-10-06T22:45:04,085 copying metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/lib/metawibele/data/uniref 2020-10-06T22:45:04,089 copying metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/lib/metawibele/data/uniref 2020-10-06T22:45:04,165 copying metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/lib/metawibele/data/uniref 2020-10-06T22:45:04,317 copying metawibele/data/uniref/README.txt -> build/lib/metawibele/data/uniref 2020-10-06T22:45:04,321 copying metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/lib/metawibele/data/uniref 2020-10-06T22:45:05,286 creating build/lib/metawibele/data/misc 2020-10-06T22:45:05,288 copying metawibele/data/misc/vignette_function.tsv -> build/lib/metawibele/data/misc 2020-10-06T22:45:05,290 creating build/lib/metawibele/Rscripts 2020-10-06T22:45:05,291 copying metawibele/Rscripts/maaslin2_utils.R -> build/lib/metawibele/Rscripts 2020-10-06T22:45:05,294 copying metawibele/Rscripts/pcl_utils.R -> build/lib/metawibele/Rscripts 2020-10-06T22:45:05,304 running build_scripts 2020-10-06T22:45:05,304 creating build/scripts-3.7 2020-10-06T22:45:05,306 copying and adjusting metawibele/workflows/characterize.py -> build/scripts-3.7 2020-10-06T22:45:05,309 copying and adjusting metawibele/workflows/prioritize.py -> build/scripts-3.7 2020-10-06T22:45:05,311 copying and adjusting metawibele/workflows/preprocess.py -> build/scripts-3.7 2020-10-06T22:45:05,313 changing mode of build/scripts-3.7/characterize.py from 644 to 755 2020-10-06T22:45:05,314 changing mode of build/scripts-3.7/prioritize.py from 644 to 755 2020-10-06T22:45:05,314 changing mode of build/scripts-3.7/preprocess.py from 644 to 755 2020-10-06T22:45:05,315 installing to build/bdist.linux-armv7l/wheel 2020-10-06T22:45:05,315 running install 2020-10-06T22:45:05,317 running install_lib 2020-10-06T22:45:05,322 creating build/bdist.linux-armv7l 2020-10-06T22:45:05,322 creating build/bdist.linux-armv7l/wheel 2020-10-06T22:45:05,325 creating build/bdist.linux-armv7l/wheel/metawibele 2020-10-06T22:45:05,327 creating build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-10-06T22:45:05,328 copying build/lib/metawibele/workflows/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-10-06T22:45:05,331 copying build/lib/metawibele/workflows/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-10-06T22:45:05,334 copying build/lib/metawibele/workflows/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-10-06T22:45:05,338 creating build/bdist.linux-armv7l/wheel/metawibele/data 2020-10-06T22:45:05,340 creating build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-10-06T22:45:05,341 copying build/lib/metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-10-06T22:45:05,345 copying build/lib/metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-10-06T22:45:05,401 copying build/lib/metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-10-06T22:45:05,458 copying build/lib/metawibele/data/uniref/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-10-06T22:45:05,460 copying build/lib/metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-10-06T22:45:06,419 creating build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,420 copying build/lib/metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,423 copying build/lib/metawibele/data/domain/pfam_descriptions.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,431 copying build/lib/metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,436 copying build/lib/metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,443 copying build/lib/metawibele/data/domain/gene_ontology.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,447 copying build/lib/metawibele/data/domain/INTERACTION.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,454 copying build/lib/metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,509 copying build/lib/metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,514 copying build/lib/metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,521 copying build/lib/metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:06,530 copying build/lib/metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:07,118 copying build/lib/metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:07,124 copying build/lib/metawibele/data/domain/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-10-06T22:45:07,126 creating build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-10-06T22:45:07,127 copying build/lib/metawibele/data/misc/vignette_function.tsv -> build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-10-06T22:45:07,130 copying build/lib/metawibele/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-10-06T22:45:07,132 copying build/lib/metawibele/utilities.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-10-06T22:45:07,136 creating build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,137 copying build/lib/metawibele/common/prepare_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,140 copying build/lib/metawibele/common/prepare_uniprot_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,143 copying build/lib/metawibele/common/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,145 copying build/lib/metawibele/common/filter_clusters.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,147 copying build/lib/metawibele/common/download_config_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,150 copying build/lib/metawibele/common/join_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,152 copying build/lib/metawibele/common/abundance_normalization.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,155 copying build/lib/metawibele/common/split_fasta_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,158 copying build/lib/metawibele/common/abundance_RPK.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,160 copying build/lib/metawibele/common/filter_prevalence.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,163 copying build/lib/metawibele/common/extract_uniprot_pfam.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,166 copying build/lib/metawibele/common/abundance_smoothing.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,168 copying build/lib/metawibele/common/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,171 copying build/lib/metawibele/common/prepare_domain_databases.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,174 copying build/lib/metawibele/common/download_database.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,177 copying build/lib/metawibele/common/prepare_uniprot_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,180 copying build/lib/metawibele/common/combine_abundance_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,183 copying build/lib/metawibele/common/extract_abundance_feature_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,185 copying build/lib/metawibele/common/split_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,188 copying build/lib/metawibele/common/transpose.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,190 copying build/lib/metawibele/common/extract_abundance_sample_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,193 copying build/lib/metawibele/common/abundance_filtering.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-10-06T22:45:07,195 copying build/lib/metawibele/check.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-10-06T22:45:07,199 creating build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-10-06T22:45:07,200 copying build/lib/metawibele/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-10-06T22:45:07,202 copying build/lib/metawibele/tasks/prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-10-06T22:45:07,205 copying build/lib/metawibele/tasks/characterization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-10-06T22:45:07,212 creating build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-10-06T22:45:07,213 copying build/lib/metawibele/prioritize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-10-06T22:45:07,215 copying build/lib/metawibele/prioritize/finalize_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-10-06T22:45:07,219 copying build/lib/metawibele/prioritize/filter_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-10-06T22:45:07,222 copying build/lib/metawibele/prioritize/quantify_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-10-06T22:45:07,226 creating build/bdist.linux-armv7l/wheel/metawibele/configs 2020-10-06T22:45:07,227 copying build/lib/metawibele/configs/metawibele.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-10-06T22:45:07,230 copying build/lib/metawibele/configs/characterization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-10-06T22:45:07,233 copying build/lib/metawibele/configs/MSPminer_setting.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-10-06T22:45:07,235 copying build/lib/metawibele/configs/prioritization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-10-06T22:45:07,238 copying build/lib/metawibele/config.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-10-06T22:45:07,241 copying build/lib/metawibele/metawibele.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-10-06T22:45:07,244 creating build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,246 copying build/lib/metawibele/tools/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,248 copying build/lib/metawibele/tools/extract_complete_ORF_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,250 copying build/lib/metawibele/tools/gene_catalog_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,253 copying build/lib/metawibele/tools/gene_abundance_indexRef.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,255 copying build/lib/metawibele/tools/extract_non_redundance_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,258 copying build/lib/metawibele/tools/format_protein_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,261 copying build/lib/metawibele/tools/extract_protein_coding_genes.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,263 copying build/lib/metawibele/tools/extract_cluster_CD_hit.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,266 copying build/lib/metawibele/tools/combine_gene_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,269 copying build/lib/metawibele/tools/preprocessing_tasks.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,272 copying build/lib/metawibele/tools/format_contig_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,275 copying build/lib/metawibele/tools/gene_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-10-06T22:45:07,279 creating build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,280 copying build/lib/metawibele/characterize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,283 copying build/lib/metawibele/characterize/pfam2go.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,286 copying build/lib/metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,289 copying build/lib/metawibele/characterize/psortb_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,292 copying build/lib/metawibele/characterize/maaslin2_summary.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,295 copying build/lib/metawibele/characterize/denovo_TM_SP.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,298 copying build/lib/metawibele/characterize/uniref_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,301 copying build/lib/metawibele/characterize/msp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,304 copying build/lib/metawibele/characterize/interproscan_signalp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,307 copying build/lib/metawibele/characterize/uniref_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,310 copying build/lib/metawibele/characterize/psortb_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,313 copying build/lib/metawibele/characterize/ddi_DOMINE_ann.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,316 copying build/lib/metawibele/characterize/psortb_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,318 copying build/lib/metawibele/characterize/sum_to_protein_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,321 copying build/lib/metawibele/characterize/maaslin2_collection.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,324 copying build/lib/metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,328 copying build/lib/metawibele/characterize/mspminer_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,331 copying build/lib/metawibele/characterize/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,334 copying build/lib/metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,336 copying build/lib/metawibele/characterize/uniref_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,339 copying build/lib/metawibele/characterize/maaslin2_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,342 copying build/lib/metawibele/characterize/interproscan_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,345 copying build/lib/metawibele/characterize/interproscan_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,348 copying build/lib/metawibele/characterize/summary_function_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,351 copying build/lib/metawibele/characterize/mspminer_msp.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,353 copying build/lib/metawibele/characterize/interproscan_pfam_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,356 copying build/lib/metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,359 copying build/lib/metawibele/characterize/abundance_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,362 copying build/lib/metawibele/characterize/interproscan_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,365 copying build/lib/metawibele/characterize/mspminer_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,368 copying build/lib/metawibele/characterize/finalize_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,371 copying build/lib/metawibele/characterize/maaslin2.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,374 copying build/lib/metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,377 copying build/lib/metawibele/characterize/ddi_DOMINE_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,381 copying build/lib/metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,384 copying build/lib/metawibele/characterize/interproscan_phobius_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,387 copying build/lib/metawibele/characterize/summary_protein_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,390 copying build/lib/metawibele/characterize/ddi_DOMINE_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,393 copying build/lib/metawibele/characterize/summary_all_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,396 copying build/lib/metawibele/characterize/metadata_format.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,399 copying build/lib/metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,402 copying build/lib/metawibele/characterize/uniref_annotator_stat.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-10-06T22:45:07,406 creating build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-10-06T22:45:07,407 copying build/lib/metawibele/Rscripts/maaslin2_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-10-06T22:45:07,410 copying build/lib/metawibele/Rscripts/pcl_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-10-06T22:45:07,414 running install_egg_info 2020-10-06T22:45:07,434 running egg_info 2020-10-06T22:45:07,435 writing metawibele.egg-info/PKG-INFO 2020-10-06T22:45:07,438 writing dependency_links to metawibele.egg-info/dependency_links.txt 2020-10-06T22:45:07,443 writing entry points to metawibele.egg-info/entry_points.txt 2020-10-06T22:45:07,445 writing top-level names to metawibele.egg-info/top_level.txt 2020-10-06T22:45:07,463 reading manifest file 'metawibele.egg-info/SOURCES.txt' 2020-10-06T22:45:07,470 reading manifest template 'MANIFEST.in' 2020-10-06T22:45:07,471 warning: no files found matching 'readme.md' 2020-10-06T22:45:07,509 writing manifest file 'metawibele.egg-info/SOURCES.txt' 2020-10-06T22:45:07,511 Copying metawibele.egg-info to build/bdist.linux-armv7l/wheel/metawibele-0.3.8-py3.7.egg-info 2020-10-06T22:45:07,526 running install_scripts 2020-10-06T22:45:07,558 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data 2020-10-06T22:45:07,559 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data/scripts 2020-10-06T22:45:07,560 copying build/scripts-3.7/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data/scripts 2020-10-06T22:45:07,563 copying build/scripts-3.7/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data/scripts 2020-10-06T22:45:07,566 copying build/scripts-3.7/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data/scripts 2020-10-06T22:45:07,568 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data/scripts/characterize.py to 755 2020-10-06T22:45:07,568 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data/scripts/prioritize.py to 755 2020-10-06T22:45:07,569 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.8.data/scripts/preprocess.py to 755 2020-10-06T22:45:07,590 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2020-10-06T22:45:07,598 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.8.dist-info/WHEEL 2020-10-06T22:45:07,601 creating '/tmp/pip-wheel-1apxb2vc/metawibele-0.3.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-10-06T22:45:07,607 adding 'metawibele/__init__.py' 2020-10-06T22:45:07,609 adding 'metawibele/check.py' 2020-10-06T22:45:07,613 adding 'metawibele/config.py' 2020-10-06T22:45:07,615 adding 'metawibele/metawibele.py' 2020-10-06T22:45:07,618 adding 'metawibele/utilities.py' 2020-10-06T22:45:07,621 adding 'metawibele/Rscripts/maaslin2_utils.R' 2020-10-06T22:45:07,627 adding 'metawibele/Rscripts/pcl_utils.R' 2020-10-06T22:45:07,630 adding 'metawibele/characterize/__init__.py' 2020-10-06T22:45:07,632 adding 'metawibele/characterize/abundance_annotator.py' 2020-10-06T22:45:07,634 adding 'metawibele/characterize/ddi_DOMINE_ExpAtlas.py' 2020-10-06T22:45:07,636 adding 'metawibele/characterize/ddi_DOMINE_SIFTS.py' 2020-10-06T22:45:07,637 adding 'metawibele/characterize/ddi_DOMINE_ann.py' 2020-10-06T22:45:07,639 adding 'metawibele/characterize/ddi_DOMINE_protein.py' 2020-10-06T22:45:07,641 adding 'metawibele/characterize/ddi_DOMINE_protein_family.py' 2020-10-06T22:45:07,643 adding 'metawibele/characterize/denovo_TM_SP.py' 2020-10-06T22:45:07,645 adding 'metawibele/characterize/finalize_annotation.py' 2020-10-06T22:45:07,647 adding 'metawibele/characterize/interproscan_annotator.py' 2020-10-06T22:45:07,649 adding 'metawibele/characterize/interproscan_pfam_protein_family.py' 2020-10-06T22:45:07,651 adding 'metawibele/characterize/interproscan_phobius_protein_family.py' 2020-10-06T22:45:07,652 adding 'metawibele/characterize/interproscan_protein.py' 2020-10-06T22:45:07,654 adding 'metawibele/characterize/interproscan_protein_family.py' 2020-10-06T22:45:07,656 adding 'metawibele/characterize/interproscan_signalp_protein_family.py' 2020-10-06T22:45:07,658 adding 'metawibele/characterize/interproscan_tmhmm_protein_family.py' 2020-10-06T22:45:07,660 adding 'metawibele/characterize/maaslin2.py' 2020-10-06T22:45:07,661 adding 'metawibele/characterize/maaslin2_annotator.py' 2020-10-06T22:45:07,664 adding 'metawibele/characterize/maaslin2_collection.py' 2020-10-06T22:45:07,666 adding 'metawibele/characterize/maaslin2_summary.py' 2020-10-06T22:45:07,668 adding 'metawibele/characterize/metadata_format.py' 2020-10-06T22:45:07,670 adding 'metawibele/characterize/msp_protein_family.py' 2020-10-06T22:45:07,671 adding 'metawibele/characterize/mspminer_msp.py' 2020-10-06T22:45:07,673 adding 'metawibele/characterize/mspminer_msp_taxonomy_annotation.py' 2020-10-06T22:45:07,675 adding 'metawibele/characterize/mspminer_msp_uniref_annotation.py' 2020-10-06T22:45:07,676 adding 'metawibele/characterize/mspminer_protein.py' 2020-10-06T22:45:07,679 adding 'metawibele/characterize/mspminer_protein_family.py' 2020-10-06T22:45:07,681 adding 'metawibele/characterize/mspminer_protein_family_taxonomy.py' 2020-10-06T22:45:07,683 adding 'metawibele/characterize/pfam2go.py' 2020-10-06T22:45:07,684 adding 'metawibele/characterize/psortb_annotator.py' 2020-10-06T22:45:07,686 adding 'metawibele/characterize/psortb_protein.py' 2020-10-06T22:45:07,688 adding 'metawibele/characterize/psortb_protein_family.py' 2020-10-06T22:45:07,689 adding 'metawibele/characterize/sum_to_protein_family_abundance.py' 2020-10-06T22:45:07,691 adding 'metawibele/characterize/summary_all_annotation.py' 2020-10-06T22:45:07,693 adding 'metawibele/characterize/summary_function_annotation.py' 2020-10-06T22:45:07,696 adding 'metawibele/characterize/summary_protein_family_uniref_annotation.py' 2020-10-06T22:45:07,698 adding 'metawibele/characterize/summary_protein_uniref_annotation.py' 2020-10-06T22:45:07,700 adding 'metawibele/characterize/uniref_annotator.py' 2020-10-06T22:45:07,702 adding 'metawibele/characterize/uniref_annotator_stat.py' 2020-10-06T22:45:07,704 adding 'metawibele/characterize/uniref_protein.py' 2020-10-06T22:45:07,706 adding 'metawibele/characterize/uniref_protein_family.py' 2020-10-06T22:45:07,708 adding 'metawibele/characterize/utils.py' 2020-10-06T22:45:07,711 adding 'metawibele/common/__init__.py' 2020-10-06T22:45:07,712 adding 'metawibele/common/abundance_RPK.py' 2020-10-06T22:45:07,713 adding 'metawibele/common/abundance_filtering.py' 2020-10-06T22:45:07,715 adding 'metawibele/common/abundance_normalization.py' 2020-10-06T22:45:07,717 adding 'metawibele/common/abundance_smoothing.py' 2020-10-06T22:45:07,718 adding 'metawibele/common/combine_abundance_annotation.py' 2020-10-06T22:45:07,720 adding 'metawibele/common/download_config_file.py' 2020-10-06T22:45:07,721 adding 'metawibele/common/download_database.py' 2020-10-06T22:45:07,723 adding 'metawibele/common/extract_abundance_feature_subset.py' 2020-10-06T22:45:07,724 adding 'metawibele/common/extract_abundance_sample_subset.py' 2020-10-06T22:45:07,725 adding 'metawibele/common/extract_uniprot_pfam.py' 2020-10-06T22:45:07,727 adding 'metawibele/common/filter_clusters.py' 2020-10-06T22:45:07,728 adding 'metawibele/common/filter_prevalence.py' 2020-10-06T22:45:07,729 adding 'metawibele/common/join_family_abundance.py' 2020-10-06T22:45:07,731 adding 'metawibele/common/prepare_domain_databases.py' 2020-10-06T22:45:07,733 adding 'metawibele/common/prepare_uniprot_annotation.py' 2020-10-06T22:45:07,734 adding 'metawibele/common/prepare_uniprot_taxonomy.py' 2020-10-06T22:45:07,736 adding 'metawibele/common/prepare_uniref_annotation.py' 2020-10-06T22:45:07,738 adding 'metawibele/common/split_family_abundance.py' 2020-10-06T22:45:07,739 adding 'metawibele/common/split_fasta_file.py' 2020-10-06T22:45:07,741 adding 'metawibele/common/transpose.py' 2020-10-06T22:45:07,743 adding 'metawibele/common/utils.py' 2020-10-06T22:45:07,745 adding 'metawibele/configs/MSPminer_setting.cfg' 2020-10-06T22:45:07,746 adding 'metawibele/configs/characterization.cfg' 2020-10-06T22:45:07,747 adding 'metawibele/configs/metawibele.cfg' 2020-10-06T22:45:07,749 adding 'metawibele/configs/prioritization.cfg' 2020-10-06T22:45:07,770 adding 'metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz' 2020-10-06T22:45:07,784 adding 'metawibele/data/domain/Encode_sigmoid_colon.txt.gz' 2020-10-06T22:45:07,800 adding 'metawibele/data/domain/FANTOM5_colon_rectum.txt.gz' 2020-10-06T22:45:07,820 adding 'metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz' 2020-10-06T22:45:07,825 adding 'metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz' 2020-10-06T22:45:07,834 adding 'metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz' 2020-10-06T22:45:07,851 adding 'metawibele/data/domain/INTERACTION.txt.gz' 2020-10-06T22:45:07,866 adding 'metawibele/data/domain/Illumina_Body_Map_colon.txt.gz' 2020-10-06T22:45:07,868 adding 'metawibele/data/domain/README.txt' 2020-10-06T22:45:07,878 adding 'metawibele/data/domain/gene_ontology.txt.gz' 2020-10-06T22:45:08,143 adding 'metawibele/data/domain/pdb_chain_pfam.tsv.gz' 2020-10-06T22:45:11,094 adding 'metawibele/data/domain/pdb_chain_taxonomy.tsv.gz' 2020-10-06T22:45:11,288 adding 'metawibele/data/domain/pfam_descriptions.txt.gz' 2020-10-06T22:45:11,292 adding 'metawibele/data/misc/vignette_function.tsv' 2020-10-06T22:45:11,293 adding 'metawibele/data/uniref/README.txt' 2020-10-06T22:45:11,532 adding 'metawibele/data/uniref/uniprot_human_pfam.tsv.gz' 2020-10-06T22:45:11,549 adding 'metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz' 2020-10-06T22:45:11,740 adding 'metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz' 2020-10-06T22:45:16,940 adding 'metawibele/data/uniref/uniprot_taxonomy.tsv.gz' 2020-10-06T22:45:17,256 adding 'metawibele/prioritize/__init__.py' 2020-10-06T22:45:17,509 adding 'metawibele/prioritize/filter_prioritization.py' 2020-10-06T22:45:17,510 adding 'metawibele/prioritize/finalize_prioritization.py' 2020-10-06T22:45:17,510 adding 'metawibele/prioritize/quantify_prioritization.py' 2020-10-06T22:45:17,510 adding 'metawibele/tasks/__init__.py' 2020-10-06T22:45:17,510 adding 'metawibele/tasks/characterization.py' 2020-10-06T22:45:17,511 adding 'metawibele/tasks/prioritization.py' 2020-10-06T22:45:17,511 adding 'metawibele/tools/__init__.py' 2020-10-06T22:45:17,511 adding 'metawibele/tools/combine_gene_sequences.py' 2020-10-06T22:45:17,511 adding 'metawibele/tools/extract_cluster_CD_hit.py' 2020-10-06T22:45:17,512 adding 'metawibele/tools/extract_complete_ORF_seq.py' 2020-10-06T22:45:17,512 adding 'metawibele/tools/extract_non_redundance_seq.py' 2020-10-06T22:45:17,512 adding 'metawibele/tools/extract_protein_coding_genes.py' 2020-10-06T22:45:17,512 adding 'metawibele/tools/format_contig_sequences.py' 2020-10-06T22:45:17,513 adding 'metawibele/tools/format_protein_sequences.py' 2020-10-06T22:45:17,513 adding 'metawibele/tools/gene_abundance.py' 2020-10-06T22:45:17,513 adding 'metawibele/tools/gene_abundance_indexRef.py' 2020-10-06T22:45:17,513 adding 'metawibele/tools/gene_catalog_abundance.py' 2020-10-06T22:45:17,513 adding 'metawibele/tools/preprocessing_tasks.py' 2020-10-06T22:45:17,514 adding 'metawibele/workflows/characterize.py' 2020-10-06T22:45:17,514 adding 'metawibele/workflows/preprocess.py' 2020-10-06T22:45:17,514 adding 'metawibele/workflows/prioritize.py' 2020-10-06T22:45:17,514 adding 'metawibele-0.3.8.data/scripts/characterize.py' 2020-10-06T22:45:17,515 adding 'metawibele-0.3.8.data/scripts/preprocess.py' 2020-10-06T22:45:17,515 adding 'metawibele-0.3.8.data/scripts/prioritize.py' 2020-10-06T22:45:17,515 adding 'metawibele-0.3.8.dist-info/LICENSE' 2020-10-06T22:45:17,515 adding 'metawibele-0.3.8.dist-info/METADATA' 2020-10-06T22:45:17,515 adding 'metawibele-0.3.8.dist-info/WHEEL' 2020-10-06T22:45:17,516 adding 'metawibele-0.3.8.dist-info/entry_points.txt' 2020-10-06T22:45:17,516 adding 'metawibele-0.3.8.dist-info/top_level.txt' 2020-10-06T22:45:17,516 adding 'metawibele-0.3.8.dist-info/RECORD' 2020-10-06T22:45:17,987 removing build/bdist.linux-armv7l/wheel 2020-10-06T22:45:18,138 Building wheel for metawibele (setup.py): finished with status 'done' 2020-10-06T22:45:18,877 Created wheel for metawibele: filename=metawibele-0.3.8-py3-none-any.whl size=72576274 sha256=24bd645d52d57f0b4c26fbb00aef3c88337c65a659c6446727dfbe72fc6447ac 2020-10-06T22:45:18,877 Stored in directory: /tmp/pip-ephem-wheel-cache-zx095xcc/wheels/e9/94/76/a41f14ca5b484a1319765d05c27173f307597fd60553564e81 2020-10-06T22:45:18,880 Successfully built metawibele 2020-10-06T22:45:20,919 Removed build tracker: '/tmp/pip-req-tracker-mjd4zv36'