2020-10-07T17:58:11,497 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2020-10-07T17:58:12,225 Created temporary directory: /tmp/pip-ephem-wheel-cache-howzimtq 2020-10-07T17:58:12,230 Created temporary directory: /tmp/pip-req-tracker-5970pa6g 2020-10-07T17:58:12,231 Initialized build tracking at /tmp/pip-req-tracker-5970pa6g 2020-10-07T17:58:12,231 Created build tracker: /tmp/pip-req-tracker-5970pa6g 2020-10-07T17:58:12,231 Entered build tracker: /tmp/pip-req-tracker-5970pa6g 2020-10-07T17:58:12,233 Created temporary directory: /tmp/pip-wheel-oau4fc06 2020-10-07T17:58:12,252 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com 2020-10-07T17:58:12,255 2 location(s) to search for versions of seqsearch: 2020-10-07T17:58:12,255 * https://pypi.org/simple/seqsearch/ 2020-10-07T17:58:12,255 * https://pypi.ngc.nvidia.com/seqsearch/ 2020-10-07T17:58:12,255 Fetching project page and analyzing links: https://pypi.org/simple/seqsearch/ 2020-10-07T17:58:12,258 Getting page https://pypi.org/simple/seqsearch/ 2020-10-07T17:58:12,262 Found index url https://pypi.org/simple 2020-10-07T17:58:12,587 Found link https://files.pythonhosted.org/packages/b9/86/394e50b0351bd0d7ef82cda2e6728c5b94276ed1b0f63965050591a2eb69/seqsearch-1.0.1.tar.gz#sha256=5ee0bc0374bfbc83aa5ded7e65e561693a48f32a884f2711e69c2af016e50020 (from https://pypi.org/simple/seqsearch/), version: 1.0.1 2020-10-07T17:58:12,588 Found link https://files.pythonhosted.org/packages/4d/4e/8937a47fc27123c9f1db94abdcfcc88930fddd2a037a317c0ab3366822fa/seqsearch-1.0.3.tar.gz#sha256=0589b39aee4c22fb4972f581705f349e61db535fa08fabc6573b3da31fd8bbee (from https://pypi.org/simple/seqsearch/), version: 1.0.3 2020-10-07T17:58:12,589 Found link https://files.pythonhosted.org/packages/03/82/b0b08e0505b0c2bb7b4cbf120408949e215c001ec9d8e25a0945524984c0/seqsearch-1.2.1.tar.gz#sha256=80f0f8cf8612da93fbb1ae4145b4488e56bc05ad9ee3827ddbfdb34cf1671a24 (from https://pypi.org/simple/seqsearch/), version: 1.2.1 2020-10-07T17:58:12,590 Found link https://files.pythonhosted.org/packages/0e/f1/08aeaa1106b81b97da68a29e713f886f09bce613d8835be87ca9a3ab06d9/seqsearch-1.2.3.tar.gz#sha256=ae040fbc5c4bcf5a740fdfe9c6aa35405e9883628b9a095433efb8b0254a5ef9 (from https://pypi.org/simple/seqsearch/), version: 1.2.3 2020-10-07T17:58:12,591 Found link https://files.pythonhosted.org/packages/44/ac/402f17f7ea655766744e4ba7ea98d0a4720d74108fb516866a86d02dfe74/seqsearch-1.2.5.tar.gz#sha256=ae84b06de6faf54669f266509f7227f93a9d96f5aff8a161124e4202253e5315 (from https://pypi.org/simple/seqsearch/), version: 1.2.5 2020-10-07T17:58:12,592 Found link https://files.pythonhosted.org/packages/8c/d7/5cc74bd2a475ee31ec780a99a033d759da8d8ec986f312564aa1c49a5716/seqsearch-1.2.7.tar.gz#sha256=e1bda575ab3e4212957843042d137bf05b2658d640d81e9992c327145a2f8dd5 (from https://pypi.org/simple/seqsearch/), version: 1.2.7 2020-10-07T17:58:12,593 Found link https://files.pythonhosted.org/packages/85/40/27dfb84f51427fc02d55b817c2bae24cf67f26e32273c14c7fb761493110/seqsearch-1.2.9.tar.gz#sha256=2c8aa9bf83cb003a83d0b9f11716992f883f6bcd3d575fa16849e88a197361a1 (from https://pypi.org/simple/seqsearch/), version: 1.2.9 2020-10-07T17:58:12,594 Found link https://files.pythonhosted.org/packages/07/52/9fd17d7fbd40dbdedaf21e430d295031cca26a946658e6a9c124bc411122/seqsearch-1.3.1.tar.gz#sha256=9116a7a7d35081e297db9c2b9e7bb83ff39f0b9237e58485913795ed6a09dc39 (from https://pypi.org/simple/seqsearch/), version: 1.3.1 2020-10-07T17:58:12,595 Found link https://files.pythonhosted.org/packages/be/a3/12081ec889f28df1481c6af8cad2c02a2c758737dfb55e1c3aea484738f7/seqsearch-1.3.3.tar.gz#sha256=d109f43bc52d11106611e14e05bbc435b582aea202428cc1074f817b7603a2a1 (from https://pypi.org/simple/seqsearch/), version: 1.3.3 2020-10-07T17:58:12,595 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/seqsearch/ 2020-10-07T17:58:12,596 Getting page https://pypi.ngc.nvidia.com/seqsearch/ 2020-10-07T17:58:12,599 Found index url https://pypi.ngc.nvidia.com 2020-10-07T17:58:13,648 Could not fetch URL https://pypi.ngc.nvidia.com/seqsearch/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/seqsearch/ - skipping 2020-10-07T17:58:13,668 Given no hashes to check 1 links for project 'seqsearch': discarding no candidates 2020-10-07T17:58:13,669 Using version 1.3.3 (newest of versions: 1.3.3) 2020-10-07T17:58:13,678 Collecting seqsearch==1.3.3 2020-10-07T17:58:13,683 Created temporary directory: /tmp/pip-unpack-tucxuhqr 2020-10-07T17:58:13,929 Downloading seqsearch-1.3.3.tar.gz (20 kB) 2020-10-07T17:58:14,165 Added seqsearch==1.3.3 from https://files.pythonhosted.org/packages/be/a3/12081ec889f28df1481c6af8cad2c02a2c758737dfb55e1c3aea484738f7/seqsearch-1.3.3.tar.gz#sha256=d109f43bc52d11106611e14e05bbc435b582aea202428cc1074f817b7603a2a1 to build tracker '/tmp/pip-req-tracker-5970pa6g' 2020-10-07T17:58:14,168 Running setup.py (path:/tmp/pip-wheel-oau4fc06/seqsearch/setup.py) egg_info for package seqsearch 2020-10-07T17:58:14,169 Created temporary directory: /tmp/pip-pip-egg-info-e7wxcxpp 2020-10-07T17:58:14,170 Running command python setup.py egg_info 2020-10-07T17:58:16,639 running egg_info 2020-10-07T17:58:16,645 creating /tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info 2020-10-07T17:58:16,647 writing /tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info/PKG-INFO 2020-10-07T17:58:16,653 writing requirements to /tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info/requires.txt 2020-10-07T17:58:16,656 writing dependency_links to /tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info/dependency_links.txt 2020-10-07T17:58:16,658 writing top-level names to /tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info/top_level.txt 2020-10-07T17:58:16,663 writing manifest file '/tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info/SOURCES.txt' 2020-10-07T17:58:17,027 reading manifest file '/tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info/SOURCES.txt' 2020-10-07T17:58:17,030 reading manifest template 'MANIFEST.in' 2020-10-07T17:58:17,038 writing manifest file '/tmp/pip-pip-egg-info-e7wxcxpp/seqsearch.egg-info/SOURCES.txt' 2020-10-07T17:58:17,178 Source in /tmp/pip-wheel-oau4fc06/seqsearch has version 1.3.3, which satisfies requirement seqsearch==1.3.3 from https://files.pythonhosted.org/packages/be/a3/12081ec889f28df1481c6af8cad2c02a2c758737dfb55e1c3aea484738f7/seqsearch-1.3.3.tar.gz#sha256=d109f43bc52d11106611e14e05bbc435b582aea202428cc1074f817b7603a2a1 2020-10-07T17:58:17,180 Removed seqsearch==1.3.3 from https://files.pythonhosted.org/packages/be/a3/12081ec889f28df1481c6af8cad2c02a2c758737dfb55e1c3aea484738f7/seqsearch-1.3.3.tar.gz#sha256=d109f43bc52d11106611e14e05bbc435b582aea202428cc1074f817b7603a2a1 from build tracker '/tmp/pip-req-tracker-5970pa6g' 2020-10-07T17:58:17,186 Building wheels for collected packages: seqsearch 2020-10-07T17:58:17,198 Created temporary directory: /tmp/pip-wheel-omx4b6pn 2020-10-07T17:58:17,200 Building wheel for seqsearch (setup.py): started 2020-10-07T17:58:17,201 Destination directory: /tmp/pip-wheel-omx4b6pn 2020-10-07T17:58:17,202 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-oau4fc06/seqsearch/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-oau4fc06/seqsearch/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-omx4b6pn 2020-10-07T17:58:19,565 running bdist_wheel 2020-10-07T17:58:19,582 running build 2020-10-07T17:58:19,583 running build_py 2020-10-07T17:58:19,919 creating build 2020-10-07T17:58:19,920 creating build/lib 2020-10-07T17:58:19,921 creating build/lib/seqsearch 2020-10-07T17:58:19,924 copying seqsearch/__init__.py -> build/lib/seqsearch 2020-10-07T17:58:19,931 creating build/lib/seqsearch/databases 2020-10-07T17:58:19,933 copying seqsearch/databases/ncbi_16s.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,938 copying seqsearch/databases/tigrfam.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,942 copying seqsearch/databases/nt.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,947 copying seqsearch/databases/string.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,952 copying seqsearch/databases/refseq.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,958 copying seqsearch/databases/pr_two.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,964 copying seqsearch/databases/silva.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,969 copying seqsearch/databases/__init__.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,976 copying seqsearch/databases/pfam.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,983 copying seqsearch/databases/foraminifera.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,989 copying seqsearch/databases/nr.py -> build/lib/seqsearch/databases 2020-10-07T17:58:19,998 creating build/lib/seqsearch/search 2020-10-07T17:58:20,001 copying seqsearch/search/hmmer.py -> build/lib/seqsearch/search 2020-10-07T17:58:20,008 copying seqsearch/search/ncbi.py -> build/lib/seqsearch/search 2020-10-07T17:58:20,014 copying seqsearch/search/vsearch.py -> build/lib/seqsearch/search 2020-10-07T17:58:20,020 copying seqsearch/search/blast.py -> build/lib/seqsearch/search 2020-10-07T17:58:20,027 copying seqsearch/search/__init__.py -> build/lib/seqsearch/search 2020-10-07T17:58:20,034 copying seqsearch/search/parallel.py -> build/lib/seqsearch/search 2020-10-07T17:58:20,043 creating build/lib/seqsearch/databases/mothur 2020-10-07T17:58:20,046 copying seqsearch/databases/mothur/greengenes.py -> build/lib/seqsearch/databases/mothur 2020-10-07T17:58:20,053 copying seqsearch/databases/mothur/silva.py -> build/lib/seqsearch/databases/mothur 2020-10-07T17:58:20,058 copying seqsearch/databases/mothur/__init__.py -> build/lib/seqsearch/databases/mothur 2020-10-07T17:58:20,063 copying seqsearch/databases/mothur/rdp.py -> build/lib/seqsearch/databases/mothur 2020-10-07T17:58:20,068 running egg_info 2020-10-07T17:58:20,101 writing seqsearch.egg-info/PKG-INFO 2020-10-07T17:58:20,105 writing requirements to seqsearch.egg-info/requires.txt 2020-10-07T17:58:20,108 writing dependency_links to seqsearch.egg-info/dependency_links.txt 2020-10-07T17:58:20,112 writing top-level names to seqsearch.egg-info/top_level.txt 2020-10-07T17:58:20,130 reading manifest file 'seqsearch.egg-info/SOURCES.txt' 2020-10-07T17:58:20,138 reading manifest template 'MANIFEST.in' 2020-10-07T17:58:20,148 writing manifest file 'seqsearch.egg-info/SOURCES.txt' 2020-10-07T17:58:20,165 installing to build/bdist.linux-armv7l/wheel 2020-10-07T17:58:20,166 running install 2020-10-07T17:58:20,168 running install_lib 2020-10-07T17:58:20,176 creating build/bdist.linux-armv7l 2020-10-07T17:58:20,177 creating build/bdist.linux-armv7l/wheel 2020-10-07T17:58:20,181 creating build/bdist.linux-armv7l/wheel/seqsearch 2020-10-07T17:58:20,185 creating build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,188 copying build/lib/seqsearch/databases/ncbi_16s.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,192 copying build/lib/seqsearch/databases/tigrfam.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,198 creating build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2020-10-07T17:58:20,200 copying build/lib/seqsearch/databases/mothur/greengenes.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2020-10-07T17:58:20,206 copying build/lib/seqsearch/databases/mothur/silva.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2020-10-07T17:58:20,212 copying build/lib/seqsearch/databases/mothur/__init__.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2020-10-07T17:58:20,216 copying build/lib/seqsearch/databases/mothur/rdp.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases/mothur 2020-10-07T17:58:20,222 copying build/lib/seqsearch/databases/nt.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,228 copying build/lib/seqsearch/databases/string.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,234 copying build/lib/seqsearch/databases/refseq.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,240 copying build/lib/seqsearch/databases/pr_two.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,246 copying build/lib/seqsearch/databases/silva.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,251 copying build/lib/seqsearch/databases/__init__.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,258 copying build/lib/seqsearch/databases/pfam.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,265 copying build/lib/seqsearch/databases/foraminifera.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,270 copying build/lib/seqsearch/databases/nr.py -> build/bdist.linux-armv7l/wheel/seqsearch/databases 2020-10-07T17:58:20,279 creating build/bdist.linux-armv7l/wheel/seqsearch/search 2020-10-07T17:58:20,285 copying build/lib/seqsearch/search/hmmer.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2020-10-07T17:58:20,290 copying build/lib/seqsearch/search/ncbi.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2020-10-07T17:58:20,296 copying build/lib/seqsearch/search/vsearch.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2020-10-07T17:58:20,302 copying build/lib/seqsearch/search/blast.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2020-10-07T17:58:20,308 copying build/lib/seqsearch/search/__init__.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2020-10-07T17:58:20,314 copying build/lib/seqsearch/search/parallel.py -> build/bdist.linux-armv7l/wheel/seqsearch/search 2020-10-07T17:58:20,319 copying build/lib/seqsearch/__init__.py -> build/bdist.linux-armv7l/wheel/seqsearch 2020-10-07T17:58:20,322 running install_egg_info 2020-10-07T17:58:20,348 Copying seqsearch.egg-info to build/bdist.linux-armv7l/wheel/seqsearch-1.3.3-py3.5.egg-info 2020-10-07T17:58:20,375 running install_scripts 2020-10-07T17:58:20,571 creating build/bdist.linux-armv7l/wheel/seqsearch-1.3.3.dist-info/WHEEL 2020-10-07T17:58:20,879 Building wheel for seqsearch (setup.py): finished with status 'done' 2020-10-07T17:58:20,884 Created wheel for seqsearch: filename=seqsearch-1.3.3-py3-none-any.whl size=32864 sha256=e74ba931bc2230cad6ec26fe2a5aad89bca4437a742e0d326274d5bf0fb62905 2020-10-07T17:58:20,885 Stored in directory: /tmp/pip-ephem-wheel-cache-howzimtq/wheels/32/ae/ad/a21849e3469975729f86636899902c9c9d2aeea8dca6185c58 2020-10-07T17:58:20,889 Successfully built seqsearch 2020-10-07T17:58:20,901 Removed build tracker: '/tmp/pip-req-tracker-5970pa6g'