2020-10-20T21:10:44,002 Created temporary directory: /tmp/pip-ephem-wheel-cache-rioldrbm 2020-10-20T21:10:44,004 Created temporary directory: /tmp/pip-req-tracker-mfzf33x9 2020-10-20T21:10:44,005 Initialized build tracking at /tmp/pip-req-tracker-mfzf33x9 2020-10-20T21:10:44,005 Created build tracker: /tmp/pip-req-tracker-mfzf33x9 2020-10-20T21:10:44,005 Entered build tracker: /tmp/pip-req-tracker-mfzf33x9 2020-10-20T21:10:44,006 Created temporary directory: /tmp/pip-wheel-relkwdx8 2020-10-20T21:10:44,016 1 location(s) to search for versions of cidc-ngs-pipeline-api: 2020-10-20T21:10:44,016 * https://pypi.org/simple/cidc-ngs-pipeline-api/ 2020-10-20T21:10:44,016 Fetching project page and analyzing links: https://pypi.org/simple/cidc-ngs-pipeline-api/ 2020-10-20T21:10:44,017 Getting page https://pypi.org/simple/cidc-ngs-pipeline-api/ 2020-10-20T21:10:44,018 Found index url https://pypi.org/simple 2020-10-20T21:10:44,107 Found link https://files.pythonhosted.org/packages/eb/72/048ba0fefabe1a6113dda9f0dd2ef49e48baa3a2192a383fe0f7f81c301b/cidc_ngs_pipeline_api-0.1.0.tar.gz#sha256=329a3c40250acbbac0c692c3c54241917546105fd227df9994c1fcf2da42bff5 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.0 2020-10-20T21:10:44,107 Found link https://files.pythonhosted.org/packages/9c/a5/33b4625004f55b0de43870d1ed4d15a1a006f7007e8653c70966254a7ea7/cidc_ngs_pipeline_api-0.1.1.tar.gz#sha256=0e0f6e94e05b22145c5a47573bfd5d58449bf7e4f87cf552b7cadfdabf9863ea (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.1 2020-10-20T21:10:44,108 Found link https://files.pythonhosted.org/packages/53/7f/eea842e5d587200410294d40f7917fc2c62dee8956547bfb89bafb00d6e7/cidc_ngs_pipeline_api-0.1.2.tar.gz#sha256=79c4b9690bec471648278566682a9f09ffc71a2c5eb57e57741ea359f87ab4af (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.2 2020-10-20T21:10:44,109 Found link https://files.pythonhosted.org/packages/28/b3/a8ee852b1bec956480c6c975bf61b08be23c22abc84c0111b1312d528dc1/cidc_ngs_pipeline_api-0.1.3.tar.gz#sha256=c2a9197d8f020fed8914b0c6e505d7793ba82cde83a9d0746631a735efb93801 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.3 2020-10-20T21:10:44,113 Given no hashes to check 1 links for project 'cidc-ngs-pipeline-api': discarding no candidates 2020-10-20T21:10:44,114 Using version 0.1.3 (newest of versions: 0.1.3) 2020-10-20T21:10:44,117 Collecting cidc-ngs-pipeline-api==0.1.3 2020-10-20T21:10:44,119 Created temporary directory: /tmp/pip-unpack-uub4vq83 2020-10-20T21:10:44,304 Downloading cidc_ngs_pipeline_api-0.1.3.tar.gz (1.3 MB) 2020-10-20T21:10:44,571 Added cidc-ngs-pipeline-api==0.1.3 from https://files.pythonhosted.org/packages/28/b3/a8ee852b1bec956480c6c975bf61b08be23c22abc84c0111b1312d528dc1/cidc_ngs_pipeline_api-0.1.3.tar.gz#sha256=c2a9197d8f020fed8914b0c6e505d7793ba82cde83a9d0746631a735efb93801 to build tracker '/tmp/pip-req-tracker-mfzf33x9' 2020-10-20T21:10:44,572 Running setup.py (path:/tmp/pip-wheel-relkwdx8/cidc-ngs-pipeline-api/setup.py) egg_info for package cidc-ngs-pipeline-api 2020-10-20T21:10:44,573 Created temporary directory: /tmp/pip-pip-egg-info-ewei0iiy 2020-10-20T21:10:44,574 Running command python setup.py egg_info 2020-10-20T21:10:45,485 running egg_info 2020-10-20T21:10:45,488 creating /tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info 2020-10-20T21:10:45,489 writing /tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info/PKG-INFO 2020-10-20T21:10:45,492 writing dependency_links to /tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info/dependency_links.txt 2020-10-20T21:10:45,494 writing requirements to /tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info/requires.txt 2020-10-20T21:10:45,495 writing top-level names to /tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info/top_level.txt 2020-10-20T21:10:45,497 writing manifest file '/tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-10-20T21:10:45,638 reading manifest file '/tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-10-20T21:10:45,639 reading manifest template 'MANIFEST.in' 2020-10-20T21:10:45,646 writing manifest file '/tmp/pip-pip-egg-info-ewei0iiy/cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-10-20T21:10:45,707 Source in /tmp/pip-wheel-relkwdx8/cidc-ngs-pipeline-api has version 0.1.3, which satisfies requirement cidc-ngs-pipeline-api==0.1.3 from https://files.pythonhosted.org/packages/28/b3/a8ee852b1bec956480c6c975bf61b08be23c22abc84c0111b1312d528dc1/cidc_ngs_pipeline_api-0.1.3.tar.gz#sha256=c2a9197d8f020fed8914b0c6e505d7793ba82cde83a9d0746631a735efb93801 2020-10-20T21:10:45,708 Removed cidc-ngs-pipeline-api==0.1.3 from https://files.pythonhosted.org/packages/28/b3/a8ee852b1bec956480c6c975bf61b08be23c22abc84c0111b1312d528dc1/cidc_ngs_pipeline_api-0.1.3.tar.gz#sha256=c2a9197d8f020fed8914b0c6e505d7793ba82cde83a9d0746631a735efb93801 from build tracker '/tmp/pip-req-tracker-mfzf33x9' 2020-10-20T21:10:45,710 Building wheels for collected packages: cidc-ngs-pipeline-api 2020-10-20T21:10:45,715 Created temporary directory: /tmp/pip-wheel-4uhs8qqn 2020-10-20T21:10:45,716 Building wheel for cidc-ngs-pipeline-api (setup.py): started 2020-10-20T21:10:45,716 Destination directory: /tmp/pip-wheel-4uhs8qqn 2020-10-20T21:10:45,716 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-relkwdx8/cidc-ngs-pipeline-api/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-relkwdx8/cidc-ngs-pipeline-api/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-4uhs8qqn 2020-10-20T21:10:46,621 running bdist_wheel 2020-10-20T21:10:46,627 running build 2020-10-20T21:10:46,627 running build_py 2020-10-20T21:10:46,758 creating build 2020-10-20T21:10:46,758 creating build/lib 2020-10-20T21:10:46,759 creating build/lib/cidc_ngs_pipeline_api 2020-10-20T21:10:46,760 copying cidc_ngs_pipeline_api/__init__.py -> build/lib/cidc_ngs_pipeline_api 2020-10-20T21:10:46,761 running egg_info 2020-10-20T21:10:46,774 writing cidc_ngs_pipeline_api.egg-info/PKG-INFO 2020-10-20T21:10:46,776 writing dependency_links to cidc_ngs_pipeline_api.egg-info/dependency_links.txt 2020-10-20T21:10:46,778 writing requirements to cidc_ngs_pipeline_api.egg-info/requires.txt 2020-10-20T21:10:46,779 writing top-level names to cidc_ngs_pipeline_api.egg-info/top_level.txt 2020-10-20T21:10:46,783 reading manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-10-20T21:10:46,785 reading manifest template 'MANIFEST.in' 2020-10-20T21:10:46,792 writing manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-10-20T21:10:46,796 copying cidc_ngs_pipeline_api/output_API.schema.json -> build/lib/cidc_ngs_pipeline_api 2020-10-20T21:10:46,798 creating build/lib/cidc_ngs_pipeline_api/__pycache__ 2020-10-20T21:10:46,799 copying cidc_ngs_pipeline_api/__pycache__/__init__.cpython-36.pyc -> build/lib/cidc_ngs_pipeline_api/__pycache__ 2020-10-20T21:10:46,801 copying cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/lib/cidc_ngs_pipeline_api/__pycache__ 2020-10-20T21:10:46,803 creating build/lib/cidc_ngs_pipeline_api/chips 2020-10-20T21:10:46,804 copying cidc_ngs_pipeline_api/chips/chips.md -> build/lib/cidc_ngs_pipeline_api/chips 2020-10-20T21:10:46,806 copying cidc_ngs_pipeline_api/chips/chips_output_API.json -> build/lib/cidc_ngs_pipeline_api/chips 2020-10-20T21:10:46,808 creating build/lib/cidc_ngs_pipeline_api/chips/imgs 2020-10-20T21:10:46,809 copying cidc_ngs_pipeline_api/chips/imgs/chips.png -> build/lib/cidc_ngs_pipeline_api/chips/imgs 2020-10-20T21:10:46,840 creating build/lib/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,841 copying cidc_ngs_pipeline_api/rna/rna.md -> build/lib/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,844 copying cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/lib/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,846 copying cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/lib/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,849 creating build/lib/cidc_ngs_pipeline_api/rna/imgs 2020-10-20T21:10:46,850 copying cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/lib/cidc_ngs_pipeline_api/rna/imgs 2020-10-20T21:10:46,868 creating build/lib/cidc_ngs_pipeline_api/tcr 2020-10-20T21:10:46,869 copying cidc_ngs_pipeline_api/tcr/tcr.md -> build/lib/cidc_ngs_pipeline_api/tcr 2020-10-20T21:10:46,872 creating build/lib/cidc_ngs_pipeline_api/tcr/imgs 2020-10-20T21:10:46,873 copying cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/lib/cidc_ngs_pipeline_api/tcr/imgs 2020-10-20T21:10:46,881 creating build/lib/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,882 copying cidc_ngs_pipeline_api/wes/wes.md -> build/lib/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,885 copying cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/lib/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,888 copying cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/lib/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,895 installing to build/bdist.linux-armv7l/wheel 2020-10-20T21:10:46,895 running install 2020-10-20T21:10:46,896 running install_lib 2020-10-20T21:10:46,901 creating build/bdist.linux-armv7l 2020-10-20T21:10:46,901 creating build/bdist.linux-armv7l/wheel 2020-10-20T21:10:46,903 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api 2020-10-20T21:10:46,905 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,907 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs 2020-10-20T21:10:46,908 copying build/lib/cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs 2020-10-20T21:10:46,923 copying build/lib/cidc_ngs_pipeline_api/rna/rna.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,925 copying build/lib/cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,927 copying build/lib/cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-10-20T21:10:46,929 copying build/lib/cidc_ngs_pipeline_api/output_API.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api 2020-10-20T21:10:46,931 copying build/lib/cidc_ngs_pipeline_api/__init__.py -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api 2020-10-20T21:10:46,934 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips 2020-10-20T21:10:46,935 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips/imgs 2020-10-20T21:10:46,936 copying build/lib/cidc_ngs_pipeline_api/chips/imgs/chips.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips/imgs 2020-10-20T21:10:46,959 copying build/lib/cidc_ngs_pipeline_api/chips/chips.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips 2020-10-20T21:10:46,961 copying build/lib/cidc_ngs_pipeline_api/chips/chips_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips 2020-10-20T21:10:46,964 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__ 2020-10-20T21:10:46,965 copying build/lib/cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__ 2020-10-20T21:10:46,968 copying build/lib/cidc_ngs_pipeline_api/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__ 2020-10-20T21:10:46,971 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,971 copying build/lib/cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,975 copying build/lib/cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,977 copying build/lib/cidc_ngs_pipeline_api/wes/wes.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-10-20T21:10:46,980 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr 2020-10-20T21:10:46,982 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs 2020-10-20T21:10:46,983 copying build/lib/cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs 2020-10-20T21:10:46,992 copying build/lib/cidc_ngs_pipeline_api/tcr/tcr.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr 2020-10-20T21:10:46,994 running install_egg_info 2020-10-20T21:10:47,002 Copying cidc_ngs_pipeline_api.egg-info to build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.3-py3.7.egg-info 2020-10-20T21:10:47,014 running install_scripts 2020-10-20T21:10:47,093 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.3.dist-info/WHEEL 2020-10-20T21:10:47,096 creating '/tmp/pip-wheel-4uhs8qqn/cidc_ngs_pipeline_api-0.1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-10-20T21:10:47,098 adding 'cidc_ngs_pipeline_api/__init__.py' 2020-10-20T21:10:47,099 adding 'cidc_ngs_pipeline_api/output_API.schema.json' 2020-10-20T21:10:47,101 adding 'cidc_ngs_pipeline_api/__pycache__/__init__.cpython-36.pyc' 2020-10-20T21:10:47,103 adding 'cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc' 2020-10-20T21:10:47,105 adding 'cidc_ngs_pipeline_api/chips/chips.md' 2020-10-20T21:10:47,107 adding 'cidc_ngs_pipeline_api/chips/chips_output_API.json' 2020-10-20T21:10:47,197 adding 'cidc_ngs_pipeline_api/chips/imgs/chips.png' 2020-10-20T21:10:47,204 adding 'cidc_ngs_pipeline_api/rna/rna.md' 2020-10-20T21:10:47,205 adding 'cidc_ngs_pipeline_api/rna/rna_config.schema.json' 2020-10-20T21:10:47,206 adding 'cidc_ngs_pipeline_api/rna/rna_output_API.json' 2020-10-20T21:10:47,261 adding 'cidc_ngs_pipeline_api/rna/imgs/RIMA.png' 2020-10-20T21:10:47,265 adding 'cidc_ngs_pipeline_api/tcr/tcr.md' 2020-10-20T21:10:47,285 adding 'cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png' 2020-10-20T21:10:47,288 adding 'cidc_ngs_pipeline_api/wes/wes.md' 2020-10-20T21:10:47,289 adding 'cidc_ngs_pipeline_api/wes/wes_config.schema.json' 2020-10-20T21:10:47,291 adding 'cidc_ngs_pipeline_api/wes/wes_output_API.json' 2020-10-20T21:10:47,293 adding 'cidc_ngs_pipeline_api-0.1.3.dist-info/METADATA' 2020-10-20T21:10:47,294 adding 'cidc_ngs_pipeline_api-0.1.3.dist-info/WHEEL' 2020-10-20T21:10:47,295 adding 'cidc_ngs_pipeline_api-0.1.3.dist-info/top_level.txt' 2020-10-20T21:10:47,295 adding 'cidc_ngs_pipeline_api-0.1.3.dist-info/RECORD' 2020-10-20T21:10:47,321 removing build/bdist.linux-armv7l/wheel 2020-10-20T21:10:47,403 Building wheel for cidc-ngs-pipeline-api (setup.py): finished with status 'done' 2020-10-20T21:10:47,420 Created wheel for cidc-ngs-pipeline-api: filename=cidc_ngs_pipeline_api-0.1.3-py3-none-any.whl size=1260821 sha256=84f6e63c8d0e4b5d15de07393cdc599b8e92bcd963f489f77e3672fad846d7ee 2020-10-20T21:10:47,420 Stored in directory: /tmp/pip-ephem-wheel-cache-rioldrbm/wheels/bc/09/03/7d53753e55ab9cdba574adb3e672f3391e7456cd8f6577f4c1 2020-10-20T21:10:47,424 Successfully built cidc-ngs-pipeline-api 2020-10-20T21:10:47,488 Removed build tracker: '/tmp/pip-req-tracker-mfzf33x9'