2020-10-21T14:54:45,015 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2020-10-21T14:54:45,696 Created temporary directory: /tmp/pip-ephem-wheel-cache-lyp5ra54 2020-10-21T14:54:45,701 Created temporary directory: /tmp/pip-req-tracker-pvcgbsmx 2020-10-21T14:54:45,702 Initialized build tracking at /tmp/pip-req-tracker-pvcgbsmx 2020-10-21T14:54:45,702 Created build tracker: /tmp/pip-req-tracker-pvcgbsmx 2020-10-21T14:54:45,703 Entered build tracker: /tmp/pip-req-tracker-pvcgbsmx 2020-10-21T14:54:45,704 Created temporary directory: /tmp/pip-wheel-9q7wp0ho 2020-10-21T14:54:45,723 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com 2020-10-21T14:54:45,726 2 location(s) to search for versions of rcsb-utils-chemref: 2020-10-21T14:54:45,726 * https://pypi.org/simple/rcsb-utils-chemref/ 2020-10-21T14:54:45,726 * https://pypi.ngc.nvidia.com/rcsb-utils-chemref/ 2020-10-21T14:54:45,727 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chemref/ 2020-10-21T14:54:45,729 Getting page https://pypi.org/simple/rcsb-utils-chemref/ 2020-10-21T14:54:45,733 Found index url https://pypi.org/simple 2020-10-21T14:54:46,171 Found link https://files.pythonhosted.org/packages/53/8a/66f539da562ca4c3a22aa913820c6fb65e854e5826bee8722f0d21808d24/rcsb.utils.chemref-0.11-py2.py3-none-any.whl#sha256=e0d3862a7015b3d5d5ec109632d3279f698c339ff45c12d760ae940598ba639e (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.11 2020-10-21T14:54:46,172 Found link https://files.pythonhosted.org/packages/ad/2c/7b8cca87ce5f2f2f767eda200e6bd5339ded78c08ffc45d7f18ca32209fb/rcsb.utils.chemref-0.11.tar.gz#sha256=bc259c7011908db093cf9e45a579000e2add93f2296a0179a54e5fe4871ae7f7 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.11 2020-10-21T14:54:46,174 Found link 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https://developer.download.nvidia.com/compute/redist/rcsb-utils-chemref/ - skipping 2020-10-21T14:54:47,399 Given no hashes to check 1 links for project 'rcsb-utils-chemref': discarding no candidates 2020-10-21T14:54:47,403 Using version 0.58 (newest of versions: 0.58) 2020-10-21T14:54:47,412 Collecting rcsb-utils-chemref==0.58 2020-10-21T14:54:47,417 Created temporary directory: /tmp/pip-unpack-kfdo0onz 2020-10-21T14:54:47,649 Downloading rcsb.utils.chemref-0.58.tar.gz (29 kB) 2020-10-21T14:54:47,848 Added rcsb-utils-chemref==0.58 from https://files.pythonhosted.org/packages/92/24/fcf2b07bea96eea7d0dca6218e833f9f38661bef90d213c726e65d9884ef/rcsb.utils.chemref-0.58.tar.gz#sha256=0f08377d6adfcd6a61a69be2cf7451f6ec7e924b48979bf72f3d308d255b1ee4 to build tracker '/tmp/pip-req-tracker-pvcgbsmx' 2020-10-21T14:54:47,850 Running setup.py (path:/tmp/pip-wheel-9q7wp0ho/rcsb-utils-chemref/setup.py) egg_info for package rcsb-utils-chemref 2020-10-21T14:54:47,851 Created temporary directory: /tmp/pip-pip-egg-info-sb0rwphu 2020-10-21T14:54:47,852 Running command python setup.py egg_info 2020-10-21T14:54:50,049 running egg_info 2020-10-21T14:54:50,055 creating /tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info 2020-10-21T14:54:50,057 writing /tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/PKG-INFO 2020-10-21T14:54:50,063 writing requirements to /tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/requires.txt 2020-10-21T14:54:50,066 writing entry points to /tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/entry_points.txt 2020-10-21T14:54:50,070 writing dependency_links to /tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/dependency_links.txt 2020-10-21T14:54:50,072 writing top-level names to /tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/top_level.txt 2020-10-21T14:54:50,076 writing manifest file '/tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/SOURCES.txt' 2020-10-21T14:54:50,455 reading manifest file '/tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/SOURCES.txt' 2020-10-21T14:54:50,459 reading manifest template 'MANIFEST.in' 2020-10-21T14:54:50,467 writing manifest file '/tmp/pip-pip-egg-info-sb0rwphu/rcsb.utils.chemref.egg-info/SOURCES.txt' 2020-10-21T14:54:50,601 Source in /tmp/pip-wheel-9q7wp0ho/rcsb-utils-chemref has version 0.58, which satisfies requirement rcsb-utils-chemref==0.58 from https://files.pythonhosted.org/packages/92/24/fcf2b07bea96eea7d0dca6218e833f9f38661bef90d213c726e65d9884ef/rcsb.utils.chemref-0.58.tar.gz#sha256=0f08377d6adfcd6a61a69be2cf7451f6ec7e924b48979bf72f3d308d255b1ee4 2020-10-21T14:54:50,602 Removed rcsb-utils-chemref==0.58 from https://files.pythonhosted.org/packages/92/24/fcf2b07bea96eea7d0dca6218e833f9f38661bef90d213c726e65d9884ef/rcsb.utils.chemref-0.58.tar.gz#sha256=0f08377d6adfcd6a61a69be2cf7451f6ec7e924b48979bf72f3d308d255b1ee4 from build tracker '/tmp/pip-req-tracker-pvcgbsmx' 2020-10-21T14:54:50,606 Building wheels for collected packages: rcsb-utils-chemref 2020-10-21T14:54:50,616 Created temporary directory: /tmp/pip-wheel-54w9t_wu 2020-10-21T14:54:50,617 Building wheel for rcsb-utils-chemref (setup.py): started 2020-10-21T14:54:50,618 Destination directory: /tmp/pip-wheel-54w9t_wu 2020-10-21T14:54:50,618 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9q7wp0ho/rcsb-utils-chemref/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9q7wp0ho/rcsb-utils-chemref/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-54w9t_wu 2020-10-21T14:54:52,836 running bdist_wheel 2020-10-21T14:54:52,852 running build 2020-10-21T14:54:52,852 running build_py 2020-10-21T14:54:53,194 creating build 2020-10-21T14:54:53,195 creating build/lib 2020-10-21T14:54:53,196 creating build/lib/rcsb 2020-10-21T14:54:53,199 copying rcsb/__init__.py -> build/lib/rcsb 2020-10-21T14:54:53,205 creating build/lib/rcsb/utils 2020-10-21T14:54:53,207 copying rcsb/utils/__init__.py -> build/lib/rcsb/utils 2020-10-21T14:54:53,214 creating build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,216 copying rcsb/utils/chemref/PsiModProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,222 copying rcsb/utils/chemref/PharosReadSqlDump.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,227 copying rcsb/utils/chemref/PubChemProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,234 copying rcsb/utils/chemref/ChemCompModelProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,241 copying rcsb/utils/chemref/ResidProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,248 copying rcsb/utils/chemref/ResidReader.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,254 copying rcsb/utils/chemref/ChemCompProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,261 copying rcsb/utils/chemref/AtcProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,268 copying rcsb/utils/chemref/DrugBankProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,275 copying rcsb/utils/chemref/__init__.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,280 copying rcsb/utils/chemref/DrugBankReader.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,288 copying rcsb/utils/chemref/PharosProvider.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,295 copying rcsb/utils/chemref/PubChemUtils.py -> build/lib/rcsb/utils/chemref 2020-10-21T14:54:53,327 installing to build/bdist.linux-armv7l/wheel 2020-10-21T14:54:53,328 running install 2020-10-21T14:54:53,330 running install_lib 2020-10-21T14:54:53,338 creating build/bdist.linux-armv7l 2020-10-21T14:54:53,339 creating build/bdist.linux-armv7l/wheel 2020-10-21T14:54:53,342 creating build/bdist.linux-armv7l/wheel/rcsb 2020-10-21T14:54:53,346 creating build/bdist.linux-armv7l/wheel/rcsb/utils 2020-10-21T14:54:53,350 creating build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,352 copying build/lib/rcsb/utils/chemref/PsiModProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,358 copying build/lib/rcsb/utils/chemref/PharosReadSqlDump.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,362 copying build/lib/rcsb/utils/chemref/PubChemProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,367 copying build/lib/rcsb/utils/chemref/ChemCompModelProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,374 copying build/lib/rcsb/utils/chemref/ResidProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,381 copying build/lib/rcsb/utils/chemref/ResidReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,387 copying build/lib/rcsb/utils/chemref/ChemCompProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,394 copying build/lib/rcsb/utils/chemref/AtcProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,402 copying build/lib/rcsb/utils/chemref/DrugBankProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,409 copying build/lib/rcsb/utils/chemref/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,414 copying build/lib/rcsb/utils/chemref/DrugBankReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,422 copying build/lib/rcsb/utils/chemref/PharosProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,429 copying build/lib/rcsb/utils/chemref/PubChemUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref 2020-10-21T14:54:53,441 copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils 2020-10-21T14:54:53,446 copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb 2020-10-21T14:54:53,451 running install_egg_info 2020-10-21T14:54:53,507 running egg_info 2020-10-21T14:54:53,508 writing rcsb.utils.chemref.egg-info/PKG-INFO 2020-10-21T14:54:53,512 writing top-level names to rcsb.utils.chemref.egg-info/top_level.txt 2020-10-21T14:54:53,515 writing dependency_links to rcsb.utils.chemref.egg-info/dependency_links.txt 2020-10-21T14:54:53,518 writing entry points to rcsb.utils.chemref.egg-info/entry_points.txt 2020-10-21T14:54:53,521 writing requirements to rcsb.utils.chemref.egg-info/requires.txt 2020-10-21T14:54:53,533 reading manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt' 2020-10-21T14:54:53,538 reading manifest template 'MANIFEST.in' 2020-10-21T14:54:53,547 writing manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt' 2020-10-21T14:54:53,550 Copying rcsb.utils.chemref.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.58-py3.5.egg-info 2020-10-21T14:54:53,587 running install_scripts 2020-10-21T14:54:53,817 creating build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.58.dist-info/WHEEL 2020-10-21T14:54:54,111 Building wheel for rcsb-utils-chemref (setup.py): finished with status 'done' 2020-10-21T14:54:54,116 Created wheel for rcsb-utils-chemref: filename=rcsb.utils.chemref-0.58-py2.py3-none-any.whl size=36051 sha256=24ca0210cef3ae203bcae8e8992f4a2aabe1b5e5bea42e8085f1263d84daf647 2020-10-21T14:54:54,117 Stored in directory: /tmp/pip-ephem-wheel-cache-lyp5ra54/wheels/32/6c/7e/be5cfa8b0e584ff87e119ccdec5684732ca17b6a89506198ef 2020-10-21T14:54:54,121 Successfully built rcsb-utils-chemref 2020-10-21T14:54:54,134 Removed build tracker: '/tmp/pip-req-tracker-pvcgbsmx'