2020-11-07T18:28:59,597 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-11-07T18:29:00,263 Created temporary directory: /tmp/pip-ephem-wheel-cache-y3a2amkt
2020-11-07T18:29:00,268 Created temporary directory: /tmp/pip-req-tracker-_2ezu38m
2020-11-07T18:29:00,269 Initialized build tracking at /tmp/pip-req-tracker-_2ezu38m
2020-11-07T18:29:00,269 Created build tracker: /tmp/pip-req-tracker-_2ezu38m
2020-11-07T18:29:00,270 Entered build tracker: /tmp/pip-req-tracker-_2ezu38m
2020-11-07T18:29:00,271 Created temporary directory: /tmp/pip-wheel-k04zmno4
2020-11-07T18:29:00,290 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-11-07T18:29:00,293 2 location(s) to search for versions of rcsb-utils-seqalign:
2020-11-07T18:29:00,293 * https://pypi.org/simple/rcsb-utils-seqalign/
2020-11-07T18:29:00,293 * https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/
2020-11-07T18:29:00,294 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-seqalign/
2020-11-07T18:29:00,296 Getting page https://pypi.org/simple/rcsb-utils-seqalign/
2020-11-07T18:29:00,300 Found index url https://pypi.org/simple
2020-11-07T18:29:00,617   Found link https://files.pythonhosted.org/packages/c8/dc/20ee48aa2b8d5b8f7ba02d87a4702ef388ad2c394a4215c83100d4c896c9/rcsb.utils.seqalign-0.11.tar.gz#sha256=1d467855fd6c304f2946bf763f2f0a4b19a4ed95fa044d0412607694ae03756e (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.11
2020-11-07T18:29:00,618   Found link https://files.pythonhosted.org/packages/c9/bf/b407af97089162727da9b2ad2871bbdbe45107c9c29c9115bad99bef81ad/rcsb.utils.seqalign-0.12.tar.gz#sha256=43fa21ed04ba740aabfb0ef041ed764fc8eb3524e6a60bdc64d8102e0f088164 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.12
2020-11-07T18:29:00,619   Found link https://files.pythonhosted.org/packages/ba/ee/e9c40273994fc159b3052f1841017bea6688345570f6977b40f842dd771b/rcsb.utils.seqalign-0.13.tar.gz#sha256=30164c3691c515cc3f3699f5ff8aa9bcc3ae442c993c5429e96024676f73b6b9 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.13
2020-11-07T18:29:00,620 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/
2020-11-07T18:29:00,621 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/
2020-11-07T18:29:00,623 Found index url https://pypi.ngc.nvidia.com
2020-11-07T18:29:01,630 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-seqalign/ - skipping
2020-11-07T18:29:01,641 Given no hashes to check 1 links for project 'rcsb-utils-seqalign': discarding no candidates
2020-11-07T18:29:01,642 Using version 0.13 (newest of versions: 0.13)
2020-11-07T18:29:01,652 Collecting rcsb-utils-seqalign==0.13
2020-11-07T18:29:01,658   Created temporary directory: /tmp/pip-unpack-3nkbuj1g
2020-11-07T18:29:01,887   Downloading rcsb.utils.seqalign-0.13.tar.gz (11 kB)
2020-11-07T18:29:02,011   Added rcsb-utils-seqalign==0.13 from https://files.pythonhosted.org/packages/ba/ee/e9c40273994fc159b3052f1841017bea6688345570f6977b40f842dd771b/rcsb.utils.seqalign-0.13.tar.gz#sha256=30164c3691c515cc3f3699f5ff8aa9bcc3ae442c993c5429e96024676f73b6b9 to build tracker '/tmp/pip-req-tracker-_2ezu38m'
2020-11-07T18:29:02,014     Running setup.py (path:/tmp/pip-wheel-k04zmno4/rcsb-utils-seqalign/setup.py) egg_info for package rcsb-utils-seqalign
2020-11-07T18:29:02,017     Created temporary directory: /tmp/pip-pip-egg-info-4cucsbh0
2020-11-07T18:29:02,018     Running command python setup.py egg_info
2020-11-07T18:29:04,196     running egg_info
2020-11-07T18:29:04,202     creating /tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info
2020-11-07T18:29:04,204     writing /tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/PKG-INFO
2020-11-07T18:29:04,211     writing entry points to /tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/entry_points.txt
2020-11-07T18:29:04,214     writing top-level names to /tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/top_level.txt
2020-11-07T18:29:04,216     writing requirements to /tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/requires.txt
2020-11-07T18:29:04,218     writing dependency_links to /tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/dependency_links.txt
2020-11-07T18:29:04,223     writing manifest file '/tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-07T18:29:04,600     reading manifest file '/tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-07T18:29:04,609     writing manifest file '/tmp/pip-pip-egg-info-4cucsbh0/rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-07T18:29:04,745   Source in /tmp/pip-wheel-k04zmno4/rcsb-utils-seqalign has version 0.13, which satisfies requirement rcsb-utils-seqalign==0.13 from https://files.pythonhosted.org/packages/ba/ee/e9c40273994fc159b3052f1841017bea6688345570f6977b40f842dd771b/rcsb.utils.seqalign-0.13.tar.gz#sha256=30164c3691c515cc3f3699f5ff8aa9bcc3ae442c993c5429e96024676f73b6b9
2020-11-07T18:29:04,747   Removed rcsb-utils-seqalign==0.13 from https://files.pythonhosted.org/packages/ba/ee/e9c40273994fc159b3052f1841017bea6688345570f6977b40f842dd771b/rcsb.utils.seqalign-0.13.tar.gz#sha256=30164c3691c515cc3f3699f5ff8aa9bcc3ae442c993c5429e96024676f73b6b9 from build tracker '/tmp/pip-req-tracker-_2ezu38m'
2020-11-07T18:29:04,751 Building wheels for collected packages: rcsb-utils-seqalign
2020-11-07T18:29:04,760   Created temporary directory: /tmp/pip-wheel-1dc36wzv
2020-11-07T18:29:04,761   Building wheel for rcsb-utils-seqalign (setup.py): started
2020-11-07T18:29:04,762   Destination directory: /tmp/pip-wheel-1dc36wzv
2020-11-07T18:29:04,763   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-k04zmno4/rcsb-utils-seqalign/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-k04zmno4/rcsb-utils-seqalign/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1dc36wzv
2020-11-07T18:29:06,945   running bdist_wheel
2020-11-07T18:29:06,961   running build
2020-11-07T18:29:06,962   running build_py
2020-11-07T18:29:07,301   creating build
2020-11-07T18:29:07,302   creating build/lib
2020-11-07T18:29:07,303   creating build/lib/rcsb
2020-11-07T18:29:07,306   copying rcsb/__init__.py -> build/lib/rcsb
2020-11-07T18:29:07,311   creating build/lib/rcsb/utils
2020-11-07T18:29:07,313   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-11-07T18:29:07,320   creating build/lib/rcsb/utils/seqalign
2020-11-07T18:29:07,322   copying rcsb/utils/seqalign/MiscUtils.py -> build/lib/rcsb/utils/seqalign
2020-11-07T18:29:07,331   copying rcsb/utils/seqalign/__init__.py -> build/lib/rcsb/utils/seqalign
2020-11-07T18:29:07,337   copying rcsb/utils/seqalign/MMseqsUtils.py -> build/lib/rcsb/utils/seqalign
2020-11-07T18:29:07,368   installing to build/bdist.linux-armv7l/wheel
2020-11-07T18:29:07,369   running install
2020-11-07T18:29:07,371   running install_lib
2020-11-07T18:29:07,379   creating build/bdist.linux-armv7l
2020-11-07T18:29:07,380   creating build/bdist.linux-armv7l/wheel
2020-11-07T18:29:07,384   creating build/bdist.linux-armv7l/wheel/rcsb
2020-11-07T18:29:07,387   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-11-07T18:29:07,390   creating build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-07T18:29:07,393   copying build/lib/rcsb/utils/seqalign/MiscUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-07T18:29:07,402   copying build/lib/rcsb/utils/seqalign/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-07T18:29:07,408   copying build/lib/rcsb/utils/seqalign/MMseqsUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-07T18:29:07,416   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-11-07T18:29:07,422   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-11-07T18:29:07,426   running install_egg_info
2020-11-07T18:29:07,474   running egg_info
2020-11-07T18:29:07,476   writing entry points to rcsb.utils.seqalign.egg-info/entry_points.txt
2020-11-07T18:29:07,478   writing rcsb.utils.seqalign.egg-info/PKG-INFO
2020-11-07T18:29:07,482   writing top-level names to rcsb.utils.seqalign.egg-info/top_level.txt
2020-11-07T18:29:07,484   writing dependency_links to rcsb.utils.seqalign.egg-info/dependency_links.txt
2020-11-07T18:29:07,487   writing requirements to rcsb.utils.seqalign.egg-info/requires.txt
2020-11-07T18:29:07,498   reading manifest file 'rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-07T18:29:07,508   writing manifest file 'rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-07T18:29:07,511   Copying rcsb.utils.seqalign.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.seqalign-0.13-py3.5.egg-info
2020-11-07T18:29:07,550   running install_scripts
2020-11-07T18:29:07,764   creating build/bdist.linux-armv7l/wheel/rcsb.utils.seqalign-0.13.dist-info/WHEEL
2020-11-07T18:29:08,011   Building wheel for rcsb-utils-seqalign (setup.py): finished with status 'done'
2020-11-07T18:29:08,015   Created wheel for rcsb-utils-seqalign: filename=rcsb.utils.seqalign-0.13-py2.py3-none-any.whl size=13309 sha256=0e360d26eeab28a108e41fac8af8bd624f3102991ee3397f8a244c16f19797c6
2020-11-07T18:29:08,016   Stored in directory: /tmp/pip-ephem-wheel-cache-y3a2amkt/wheels/4f/49/0a/48788bcb6bbc582131dea8a1d48eb0011e8a4acccb7dbf30a3
2020-11-07T18:29:08,020 Successfully built rcsb-utils-seqalign
2020-11-07T18:29:08,029 Removed build tracker: '/tmp/pip-req-tracker-_2ezu38m'