2020-11-09T20:26:00,456 Created temporary directory: /tmp/pip-ephem-wheel-cache-aroge63_
2020-11-09T20:26:00,458 Created temporary directory: /tmp/pip-req-tracker-99zflxrs
2020-11-09T20:26:00,459 Initialized build tracking at /tmp/pip-req-tracker-99zflxrs
2020-11-09T20:26:00,459 Created build tracker: /tmp/pip-req-tracker-99zflxrs
2020-11-09T20:26:00,459 Entered build tracker: /tmp/pip-req-tracker-99zflxrs
2020-11-09T20:26:00,460 Created temporary directory: /tmp/pip-wheel-bl9fodbf
2020-11-09T20:26:00,470 1 location(s) to search for versions of megalodon:
2020-11-09T20:26:00,470 * https://pypi.org/simple/megalodon/
2020-11-09T20:26:00,471 Fetching project page and analyzing links: https://pypi.org/simple/megalodon/
2020-11-09T20:26:00,471 Getting page https://pypi.org/simple/megalodon/
2020-11-09T20:26:00,473 Found index url https://pypi.org/simple
2020-11-09T20:26:00,577   Skipping link: none of the wheel's tags match: cp37-cp37m-macosx_10_14_x86_64: https://files.pythonhosted.org/packages/fe/5f/fc169f4470c2ab9a3d0dcf7b0eba0752a950494eb6587cbe3425724bcbaa/megalodon-1.0.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=de244047d7a7d1f08a86fbed509d20eeed709187f84e765d9b9a4f5359364a30 (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,578   Found link https://files.pythonhosted.org/packages/9b/94/e9a546cb3958043d7378b0d1b5eebe01ca3923db3de08a10ef230e27dff5/megalodon-1.0.0.tar.gz#sha256=a547c80eb95763ecf13fed66023953fa8fe6c98082e9e249ef0f859772f01ccc (from https://pypi.org/simple/megalodon/), version: 1.0.0
2020-11-09T20:26:00,578   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/15/da/db7e0d83c7237552d45289530e9418d460c7a994f0d2b6a1735f98f62ecf/megalodon-2.0.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=bcea1352257f402f82787a2494ebc02f35503c15edd739fe8663f1417447be13 (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,579   Found link https://files.pythonhosted.org/packages/1d/e0/6a40deaac257dacfb2c31c056b37abd76e8ddfc8e852ea5117cb3d67b220/megalodon-2.0.0.tar.gz#sha256=28deb452ba87cfdf116bcdbc2e6335ab3220d363a7f545594d43c60cf8e9040c (from https://pypi.org/simple/megalodon/), version: 2.0.0
2020-11-09T20:26:00,579   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/33/7c/bfd056d9b7d5a618f61d28fe44d2402a16b6a959f9a30cd13f8dc7046e4c/megalodon-2.1.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=1052edf69302c8d018bdde48d6673c03364255acdfde0aa9938997fee66f7fbe (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,579   Found link https://files.pythonhosted.org/packages/aa/cc/b3c81dc70660c4e043180ea7535b8b42dd8724cddd784dbeb039ff2bf0c5/megalodon-2.1.0.tar.gz#sha256=1e6db96a9d14a1041b435f4cf0fdd19a0809490efd4c2d4dae7eeaa2423db3a3 (from https://pypi.org/simple/megalodon/), version: 2.1.0
2020-11-09T20:26:00,580   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/82/eb/8a50a84306188acf8c4dc1855184d652e6497a11343769b2d6b474a96d66/megalodon-2.2.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=d138a85f21444a1105bc8c056b92e44a3866692291d7af3d76f87dcab8f986b1 (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,580   Found link https://files.pythonhosted.org/packages/74/a9/32eb1037cb5e427a433a648e02fd0e3e137d8803320858190e7b2fec74a7/megalodon-2.2.0.tar.gz#sha256=0f057644f21ce76ea8b50625e297c9f9449e0710a9423387c4d7da43b4e13115 (from https://pypi.org/simple/megalodon/), version: 2.2.0
2020-11-09T20:26:00,581   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/82/27/2831a1d28162814e76b2e8a11fce724981e8859d1bc01f6466c242c4aca8/megalodon-2.2.1-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=2cad064accda0a6aef3ac728fc3a1bdd4016145eb16cb322b542b0312cdb5cd5 (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,581   Found link https://files.pythonhosted.org/packages/af/83/f12260694514be27333adb79165bc3958b59909eb21495b918a98e0e6f07/megalodon-2.2.1.tar.gz#sha256=33f3fdeae806a34fc9a0e2b3cb5b4d5bf7c1822c6eb00f9ed8a3cd2fb1327ef7 (from https://pypi.org/simple/megalodon/), version: 2.2.1
2020-11-09T20:26:00,581   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/23/94/863df7fd77e1944284db39b53c3cc1f70e0f8fcbf6986d2a88e6f4d580e8/megalodon-2.2.2-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=0d097cc1fef40f8687647b5b2762567b845af016da396720bdd831e205ee8a17 (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,581   Found link https://files.pythonhosted.org/packages/9e/46/69945645195a2fb592946734e200065f4789a25d58083d8c3abf9892a81f/megalodon-2.2.2.tar.gz#sha256=e4c1e59951187bee9113cbaa34e1b7e1481cd4445e7086e05e2f87ed2fdcff4b (from https://pypi.org/simple/megalodon/), version: 2.2.2
2020-11-09T20:26:00,582   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/45/a6/2823df05db649df59c68dd45cf096fbfbfc329ef1d0f7ebec4f8d9f22aba/megalodon-2.2.3-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=5d0a7ac3aa6682e765b65ccf21287f19adb13136c5bbf1df2261d3977ae8477d (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,582   Found link https://files.pythonhosted.org/packages/4e/ef/da0e43132c1e0eb419591aa7827c4283599e58693d0b62234154b82596ae/megalodon-2.2.3.tar.gz#sha256=15da8761287df96251e08960fbf4bb1d1f2acc35ed8f824923845db78e3e1d90 (from https://pypi.org/simple/megalodon/), version: 2.2.3
2020-11-09T20:26:00,583   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/68/ae/04258dc7767930aa202d1bde4b85ab85d7198e309aeac9dd87022622feb2/megalodon-2.2.4-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=bc8f2941db875a09c831c8f9430fbef8192827ace981eb64f7dd28d3a9ee6351 (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,583   Found link https://files.pythonhosted.org/packages/f2/1a/4cbec97bcedb05c100398b752bccc14078a7bb7d72e4c3dd9adf96280818/megalodon-2.2.4.tar.gz#sha256=a882b2a388c82fdcc150de46f9dc10d5253afe7e44e419896ac1c5783b50531c (from https://pypi.org/simple/megalodon/), version: 2.2.4
2020-11-09T20:26:00,583   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/19/dd/f9468b176d7205983acd0815d8e5c8c261befeac8ada2b56b1ecb993bb68/megalodon-2.2.5-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=d5997afe79945d93c64b6d7c9e43abec8e8ea6855b46d9310e591d6b80c1a1b4 (from https://pypi.org/simple/megalodon/)
2020-11-09T20:26:00,583   Found link https://files.pythonhosted.org/packages/16/ae/a874438ab41e90ab0cef6dd27dacfdafde85d1e53919d16a6cf7179db5a0/megalodon-2.2.5.tar.gz#sha256=2e1d518defaabc15a1e95ace2738823cee1d6394066b4208527bb4d75bcf624a (from https://pypi.org/simple/megalodon/), version: 2.2.5
2020-11-09T20:26:00,585 Given no hashes to check 1 links for project 'megalodon': discarding no candidates
2020-11-09T20:26:00,586 Using version 2.2.5 (newest of versions: 2.2.5)
2020-11-09T20:26:00,590 Collecting megalodon==2.2.5
2020-11-09T20:26:00,591   Created temporary directory: /tmp/pip-unpack-tpgnuuiy
2020-11-09T20:26:00,643   Downloading megalodon-2.2.5.tar.gz (7.8 MB)
2020-11-09T20:26:02,334   Added megalodon==2.2.5 from https://files.pythonhosted.org/packages/16/ae/a874438ab41e90ab0cef6dd27dacfdafde85d1e53919d16a6cf7179db5a0/megalodon-2.2.5.tar.gz#sha256=2e1d518defaabc15a1e95ace2738823cee1d6394066b4208527bb4d75bcf624a to build tracker '/tmp/pip-req-tracker-99zflxrs'
2020-11-09T20:26:02,336     Running setup.py (path:/tmp/pip-wheel-bl9fodbf/megalodon/setup.py) egg_info for package megalodon
2020-11-09T20:26:02,336     Created temporary directory: /tmp/pip-pip-egg-info-mihszs84
2020-11-09T20:26:02,337     Running command python setup.py egg_info
2020-11-09T20:26:03,562     running egg_info
2020-11-09T20:26:03,564     creating /tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info
2020-11-09T20:26:03,565     writing /tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/PKG-INFO
2020-11-09T20:26:03,569     writing dependency_links to /tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/dependency_links.txt
2020-11-09T20:26:03,571     writing entry points to /tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/entry_points.txt
2020-11-09T20:26:03,572     writing requirements to /tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/requires.txt
2020-11-09T20:26:03,573     writing top-level names to /tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/top_level.txt
2020-11-09T20:26:03,575     writing manifest file '/tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/SOURCES.txt'
2020-11-09T20:26:03,941     reading manifest file '/tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/SOURCES.txt'
2020-11-09T20:26:03,943     reading manifest template 'MANIFEST.in'
2020-11-09T20:26:03,949     writing manifest file '/tmp/pip-pip-egg-info-mihszs84/megalodon.egg-info/SOURCES.txt'
2020-11-09T20:26:04,050   Source in /tmp/pip-wheel-bl9fodbf/megalodon has version 2.2.5, which satisfies requirement megalodon==2.2.5 from https://files.pythonhosted.org/packages/16/ae/a874438ab41e90ab0cef6dd27dacfdafde85d1e53919d16a6cf7179db5a0/megalodon-2.2.5.tar.gz#sha256=2e1d518defaabc15a1e95ace2738823cee1d6394066b4208527bb4d75bcf624a
2020-11-09T20:26:04,051   Removed megalodon==2.2.5 from https://files.pythonhosted.org/packages/16/ae/a874438ab41e90ab0cef6dd27dacfdafde85d1e53919d16a6cf7179db5a0/megalodon-2.2.5.tar.gz#sha256=2e1d518defaabc15a1e95ace2738823cee1d6394066b4208527bb4d75bcf624a from build tracker '/tmp/pip-req-tracker-99zflxrs'
2020-11-09T20:26:04,054 Building wheels for collected packages: megalodon
2020-11-09T20:26:04,059   Created temporary directory: /tmp/pip-wheel-bsp_laad
2020-11-09T20:26:04,059   Building wheel for megalodon (setup.py): started
2020-11-09T20:26:04,059   Destination directory: /tmp/pip-wheel-bsp_laad
2020-11-09T20:26:04,060   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-bl9fodbf/megalodon/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-bl9fodbf/megalodon/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bsp_laad
2020-11-09T20:26:05,276   running bdist_wheel
2020-11-09T20:26:05,283   running build
2020-11-09T20:26:05,283   running build_py
2020-11-09T20:26:05,409   creating build
2020-11-09T20:26:05,409   creating build/lib.linux-armv7l-3.7
2020-11-09T20:26:05,410   creating build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,411   copying megalodon/logging.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,413   copying megalodon/mapping.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,416   copying megalodon/fast5_io.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,419   copying megalodon/megalodon.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,422   copying megalodon/_version.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,424   copying megalodon/megalodon_helper.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,427   copying megalodon/mods.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,431   copying megalodon/__init__.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,433   copying megalodon/calibration.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,436   copying megalodon/backends.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,439   copying megalodon/signal_mapping.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,442   copying megalodon/megalodon_multiprocessing.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,444   copying megalodon/aggregate.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,447   copying megalodon/__main__.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,449   copying megalodon/variants.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-09T20:26:05,456   creating build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,457   copying megalodon_extras/_extras_parsers.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,460   copying megalodon_extras/variants_index_database.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,462   copying megalodon_extras/validate_aggregated_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,465   copying megalodon_extras/validate_results.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,467   copying megalodon_extras/phase_variants_whatshap_filter.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,469   copying megalodon_extras/per_read_text_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,471   copying megalodon_extras/variants_resolve.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,473   copying megalodon_extras/modified_bases_estimate_threshold.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,476   copying megalodon_extras/variants_heterozygous_factor.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,478   copying megalodon_extras/modified_bases_index_database.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,480   copying megalodon_extras/modified_bases_describe_alphabet.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,482   copying megalodon_extras/modified_bases_split_by_motif.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,485   copying megalodon_extras/merge_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,487   copying megalodon_extras/__init__.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,489   copying megalodon_extras/calibrate_merge_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,491   copying megalodon_extras/merge_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,494   copying megalodon_extras/calibrate_generate_modified_base_stats.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,497   copying megalodon_extras/calibrate_generate_variant_stats.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,500   copying megalodon_extras/per_read_text_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,503   copying megalodon_extras/modified_bases_create_ground_truth.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,505   copying megalodon_extras/validate_compare_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,508   copying megalodon_extras/calibrate_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,512   copying megalodon_extras/merge_aggregated_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,515   copying megalodon_extras/modified_bases_update_database.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,517   copying megalodon_extras/phase_variants_extract_haplotype_reads.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,525   copying megalodon_extras/variants_atomize.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,528   copying megalodon_extras/aggregate_run.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,531   copying megalodon_extras/phase_variants_merge_haploid_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,533   copying megalodon_extras/calibrate_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,536   copying megalodon_extras/__main__.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,538   copying megalodon_extras/modified_bases_per_site_thresholds.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-09T20:26:05,558   creating build/lib.linux-armv7l-3.7/megalodon/model_data
2020-11-09T20:26:05,558   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:05,559   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:05,565   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:05,591   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:05,598   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:05,606   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:05,607   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:05,612   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:05,639   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:05,648   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:05,651   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-09T20:26:05,652   copying megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-09T20:26:05,680   copying megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-09T20:26:05,688   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-09T20:26:05,689   copying megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-09T20:26:05,717   copying megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-09T20:26:05,728   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:05,729   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:05,735   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:05,779   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:05,787   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:05,794   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-09T20:26:05,795   copying megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-09T20:26:05,820   copying megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-09T20:26:05,827   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:05,828   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:05,832   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:05,854   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:05,861   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:05,868   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-09T20:26:05,868   copying megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-09T20:26:05,889   copying megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-09T20:26:05,897   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-09T20:26:05,898   copying megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-09T20:26:05,923   copying megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-09T20:26:05,929   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:05,930   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:05,934   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:05,962   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:05,969   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:05,971   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-09T20:26:05,972   copying megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-09T20:26:05,993   copying megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-09T20:26:06,002   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-09T20:26:06,003   copying megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-09T20:26:06,032   copying megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-09T20:26:06,038   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:06,039   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:06,043   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:06,072   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:06,080   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:06,085   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-09T20:26:06,086   copying megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-09T20:26:06,117   copying megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-09T20:26:06,127   running build_ext
2020-11-09T20:26:06,328   cythoning megalodon/_decode.pyx to megalodon/_decode.c
2020-11-09T20:26:09,087   building 'megalodon.decode' extension
2020-11-09T20:26:09,087   creating build/temp.linux-armv7l-3.7
2020-11-09T20:26:09,088   creating build/temp.linux-armv7l-3.7/megalodon
2020-11-09T20:26:09,089   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c megalodon/_decode.c -o build/temp.linux-armv7l-3.7/megalodon/_decode.o -std=c99
2020-11-09T20:26:09,527   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-11-09T20:26:09,527                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-11-09T20:26:09,528                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-11-09T20:26:09,528                    from megalodon/_decode.c:612:
2020-11-09T20:26:09,528   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-11-09T20:26:09,528    #warning "Using deprecated NumPy API, disable it with " \
2020-11-09T20:26:09,529     ^~~~~~~
2020-11-09T20:26:19,815   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/megalodon/_decode.o -o build/lib.linux-armv7l-3.7/megalodon/decode.cpython-37m-arm-linux-gnueabihf.so
2020-11-09T20:26:19,991   installing to build/bdist.linux-armv7l/wheel
2020-11-09T20:26:19,992   running install
2020-11-09T20:26:19,993   running install_lib
2020-11-09T20:26:19,998   creating build/bdist.linux-armv7l
2020-11-09T20:26:19,998   creating build/bdist.linux-armv7l/wheel
2020-11-09T20:26:20,001   creating build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,003   copying build/lib.linux-armv7l-3.7/megalodon_extras/_extras_parsers.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,007   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_index_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,009   copying build/lib.linux-armv7l-3.7/megalodon_extras/validate_aggregated_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,012   copying build/lib.linux-armv7l-3.7/megalodon_extras/validate_results.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,015   copying build/lib.linux-armv7l-3.7/megalodon_extras/phase_variants_whatshap_filter.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,017   copying build/lib.linux-armv7l-3.7/megalodon_extras/per_read_text_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,019   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_resolve.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,022   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_estimate_threshold.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,024   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_heterozygous_factor.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,027   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_index_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,030   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_describe_alphabet.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,032   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_split_by_motif.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,035   copying build/lib.linux-armv7l-3.7/megalodon_extras/merge_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,038   copying build/lib.linux-armv7l-3.7/megalodon_extras/__init__.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,040   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_merge_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,042   copying build/lib.linux-armv7l-3.7/megalodon_extras/merge_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,046   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_generate_modified_base_stats.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,049   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_generate_variant_stats.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,053   copying build/lib.linux-armv7l-3.7/megalodon_extras/per_read_text_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,055   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_create_ground_truth.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,058   copying build/lib.linux-armv7l-3.7/megalodon_extras/validate_compare_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,061   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,064   copying build/lib.linux-armv7l-3.7/megalodon_extras/merge_aggregated_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,067   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_update_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,070   copying build/lib.linux-armv7l-3.7/megalodon_extras/phase_variants_extract_haplotype_reads.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,072   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_atomize.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,074   copying build/lib.linux-armv7l-3.7/megalodon_extras/aggregate_run.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,077   copying build/lib.linux-armv7l-3.7/megalodon_extras/phase_variants_merge_haploid_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,080   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,083   copying build/lib.linux-armv7l-3.7/megalodon_extras/__main__.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,086   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_per_site_thresholds.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-09T20:26:20,092   creating build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,093   copying build/lib.linux-armv7l-3.7/megalodon/logging.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,096   copying build/lib.linux-armv7l-3.7/megalodon/mapping.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,100   copying build/lib.linux-armv7l-3.7/megalodon/decode.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,119   copying build/lib.linux-armv7l-3.7/megalodon/fast5_io.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,124   copying build/lib.linux-armv7l-3.7/megalodon/megalodon.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,129   copying build/lib.linux-armv7l-3.7/megalodon/_version.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,131   copying build/lib.linux-armv7l-3.7/megalodon/megalodon_helper.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,134   copying build/lib.linux-armv7l-3.7/megalodon/mods.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,139   copying build/lib.linux-armv7l-3.7/megalodon/__init__.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,141   copying build/lib.linux-armv7l-3.7/megalodon/calibration.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,144   copying build/lib.linux-armv7l-3.7/megalodon/backends.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,148   copying build/lib.linux-armv7l-3.7/megalodon/signal_mapping.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,151   copying build/lib.linux-armv7l-3.7/megalodon/megalodon_multiprocessing.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,153   copying build/lib.linux-armv7l-3.7/megalodon/aggregate.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,157   copying build/lib.linux-armv7l-3.7/megalodon/__main__.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,160   copying build/lib.linux-armv7l-3.7/megalodon/variants.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-09T20:26:20,166   creating build/bdist.linux-armv7l/wheel/megalodon/model_data
2020-11-09T20:26:20,168   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:20,169   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:20,176   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:20,204   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:20,213   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-09T20:26:20,221   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:20,223   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:20,228   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:20,253   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:20,260   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-09T20:26:20,264   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-09T20:26:20,265   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-09T20:26:20,287   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-09T20:26:20,296   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-09T20:26:20,298   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-09T20:26:20,325   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-09T20:26:20,336   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:20,337   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:20,343   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:20,374   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:20,382   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-09T20:26:20,389   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-09T20:26:20,390   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-09T20:26:20,415   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-09T20:26:20,424   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:20,425   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:20,429   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:20,458   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:20,466   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-09T20:26:20,473   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-09T20:26:20,474   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-09T20:26:20,500   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-09T20:26:20,510   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-09T20:26:20,511   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-09T20:26:20,542   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-09T20:26:20,550   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,551   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,555   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,579   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,586   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,593   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-09T20:26:20,594   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-09T20:26:20,620   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-09T20:26:20,629   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-09T20:26:20,631   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-09T20:26:20,657   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-09T20:26:20,665   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,665   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,669   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,696   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,703   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-09T20:26:20,707   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-09T20:26:20,708   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-09T20:26:20,740   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-09T20:26:20,748   running install_egg_info
2020-11-09T20:26:20,770   running egg_info
2020-11-09T20:26:20,771   writing megalodon.egg-info/PKG-INFO
2020-11-09T20:26:20,774   writing dependency_links to megalodon.egg-info/dependency_links.txt
2020-11-09T20:26:20,776   writing entry points to megalodon.egg-info/entry_points.txt
2020-11-09T20:26:20,778   writing requirements to megalodon.egg-info/requires.txt
2020-11-09T20:26:20,779   writing top-level names to megalodon.egg-info/top_level.txt
2020-11-09T20:26:20,806   reading manifest file 'megalodon.egg-info/SOURCES.txt'
2020-11-09T20:26:20,811   reading manifest template 'MANIFEST.in'
2020-11-09T20:26:20,822   writing manifest file 'megalodon.egg-info/SOURCES.txt'
2020-11-09T20:26:20,825   Copying megalodon.egg-info to build/bdist.linux-armv7l/wheel/megalodon-2.2.5-py3.7.egg-info
2020-11-09T20:26:20,843   running install_scripts
2020-11-09T20:26:20,917   adding license file "LICENCE.txt" (matched pattern "LICEN[CS]E*")
2020-11-09T20:26:20,924   creating build/bdist.linux-armv7l/wheel/megalodon-2.2.5.dist-info/WHEEL
2020-11-09T20:26:20,928   creating '/tmp/pip-wheel-bsp_laad/megalodon-2.2.5-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-11-09T20:26:20,931   adding 'megalodon/__init__.py'
2020-11-09T20:26:20,934   adding 'megalodon/__main__.py'
2020-11-09T20:26:20,936   adding 'megalodon/_version.py'
2020-11-09T20:26:20,938   adding 'megalodon/aggregate.py'
2020-11-09T20:26:20,945   adding 'megalodon/backends.py'
2020-11-09T20:26:20,948   adding 'megalodon/calibration.py'
2020-11-09T20:26:21,067   adding 'megalodon/decode.cpython-37m-arm-linux-gnueabihf.so'
2020-11-09T20:26:21,072   adding 'megalodon/fast5_io.py'
2020-11-09T20:26:21,074   adding 'megalodon/logging.py'
2020-11-09T20:26:21,076   adding 'megalodon/mapping.py'
2020-11-09T20:26:21,083   adding 'megalodon/megalodon.py'
2020-11-09T20:26:21,087   adding 'megalodon/megalodon_helper.py'
2020-11-09T20:26:21,089   adding 'megalodon/megalodon_multiprocessing.py'
2020-11-09T20:26:21,101   adding 'megalodon/mods.py'
2020-11-09T20:26:21,103   adding 'megalodon/signal_mapping.py'
2020-11-09T20:26:21,114   adding 'megalodon/variants.py'
2020-11-09T20:26:21,177   adding 'megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,203   adding 'megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,253   adding 'megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,281   adding 'megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,329   adding 'megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,357   adding 'megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,408   adding 'megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,436   adding 'megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,495   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,522   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,577   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,604   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,664   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,691   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,742   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,770   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,780   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz'
2020-11-09T20:26:21,802   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf'
2020-11-09T20:26:21,862   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:21,891   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:21,901   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz'
2020-11-09T20:26:21,923   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf'
2020-11-09T20:26:21,978   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:22,007   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:22,015   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz'
2020-11-09T20:26:22,020   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-09T20:26:22,065   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:22,093   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:22,102   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz'
2020-11-09T20:26:22,123   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-09T20:26:22,176   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:22,203   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:22,209   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz'
2020-11-09T20:26:22,212   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-09T20:26:22,259   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:22,286   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:22,292   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz'
2020-11-09T20:26:22,295   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-09T20:26:22,336   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz'
2020-11-09T20:26:22,364   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-09T20:26:22,368   adding 'megalodon_extras/__init__.py'
2020-11-09T20:26:22,370   adding 'megalodon_extras/__main__.py'
2020-11-09T20:26:22,374   adding 'megalodon_extras/_extras_parsers.py'
2020-11-09T20:26:22,375   adding 'megalodon_extras/aggregate_run.py'
2020-11-09T20:26:22,377   adding 'megalodon_extras/calibrate_generate_modified_base_stats.py'
2020-11-09T20:26:22,379   adding 'megalodon_extras/calibrate_generate_variant_stats.py'
2020-11-09T20:26:22,381   adding 'megalodon_extras/calibrate_merge_modified_bases.py'
2020-11-09T20:26:22,383   adding 'megalodon_extras/calibrate_modified_bases.py'
2020-11-09T20:26:22,385   adding 'megalodon_extras/calibrate_variants.py'
2020-11-09T20:26:22,386   adding 'megalodon_extras/merge_aggregated_modified_bases.py'
2020-11-09T20:26:22,388   adding 'megalodon_extras/merge_modified_bases.py'
2020-11-09T20:26:22,390   adding 'megalodon_extras/merge_variants.py'
2020-11-09T20:26:22,391   adding 'megalodon_extras/modified_bases_create_ground_truth.py'
2020-11-09T20:26:22,393   adding 'megalodon_extras/modified_bases_describe_alphabet.py'
2020-11-09T20:26:22,394   adding 'megalodon_extras/modified_bases_estimate_threshold.py'
2020-11-09T20:26:22,395   adding 'megalodon_extras/modified_bases_index_database.py'
2020-11-09T20:26:22,397   adding 'megalodon_extras/modified_bases_per_site_thresholds.py'
2020-11-09T20:26:22,399   adding 'megalodon_extras/modified_bases_split_by_motif.py'
2020-11-09T20:26:22,400   adding 'megalodon_extras/modified_bases_update_database.py'
2020-11-09T20:26:22,401   adding 'megalodon_extras/per_read_text_modified_bases.py'
2020-11-09T20:26:22,403   adding 'megalodon_extras/per_read_text_variants.py'
2020-11-09T20:26:22,404   adding 'megalodon_extras/phase_variants_extract_haplotype_reads.py'
2020-11-09T20:26:22,406   adding 'megalodon_extras/phase_variants_merge_haploid_variants.py'
2020-11-09T20:26:22,408   adding 'megalodon_extras/phase_variants_whatshap_filter.py'
2020-11-09T20:26:22,409   adding 'megalodon_extras/validate_aggregated_modified_bases.py'
2020-11-09T20:26:22,411   adding 'megalodon_extras/validate_compare_modified_bases.py'
2020-11-09T20:26:22,414   adding 'megalodon_extras/validate_results.py'
2020-11-09T20:26:22,416   adding 'megalodon_extras/variants_atomize.py'
2020-11-09T20:26:22,417   adding 'megalodon_extras/variants_heterozygous_factor.py'
2020-11-09T20:26:22,419   adding 'megalodon_extras/variants_index_database.py'
2020-11-09T20:26:22,421   adding 'megalodon_extras/variants_resolve.py'
2020-11-09T20:26:22,423   adding 'megalodon-2.2.5.dist-info/LICENCE.txt'
2020-11-09T20:26:22,426   adding 'megalodon-2.2.5.dist-info/METADATA'
2020-11-09T20:26:22,427   adding 'megalodon-2.2.5.dist-info/WHEEL'
2020-11-09T20:26:22,428   adding 'megalodon-2.2.5.dist-info/entry_points.txt'
2020-11-09T20:26:22,429   adding 'megalodon-2.2.5.dist-info/top_level.txt'
2020-11-09T20:26:22,430   adding 'megalodon-2.2.5.dist-info/RECORD'
2020-11-09T20:26:22,582   removing build/bdist.linux-armv7l/wheel
2020-11-09T20:26:22,888   Building wheel for megalodon (setup.py): finished with status 'done'
2020-11-09T20:26:22,982   Created wheel for megalodon: filename=megalodon-2.2.5-cp37-cp37m-linux_armv7l.whl size=8061705 sha256=fa127076a60ee8612766c8cfa2e3d297574e87b1b99e8a5b416210bcf71f65cd
2020-11-09T20:26:22,983   Stored in directory: /tmp/pip-ephem-wheel-cache-aroge63_/wheels/7c/35/83/87ef62b604f2207e08c8f9abca41d87fa88c70ca2dd6667207
2020-11-09T20:26:22,985 Successfully built megalodon
2020-11-09T20:26:23,220 Removed build tracker: '/tmp/pip-req-tracker-99zflxrs'