2020-11-12T01:17:09,280 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-11-12T01:17:09,963 Created temporary directory: /tmp/pip-ephem-wheel-cache-u4pf00kg
2020-11-12T01:17:09,968 Created temporary directory: /tmp/pip-req-tracker-lpbp9srd
2020-11-12T01:17:09,969 Initialized build tracking at /tmp/pip-req-tracker-lpbp9srd
2020-11-12T01:17:09,970 Created build tracker: /tmp/pip-req-tracker-lpbp9srd
2020-11-12T01:17:09,970 Entered build tracker: /tmp/pip-req-tracker-lpbp9srd
2020-11-12T01:17:09,972 Created temporary directory: /tmp/pip-wheel-pd2dkats
2020-11-12T01:17:09,991 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-11-12T01:17:09,994 2 location(s) to search for versions of rcsb-utils-seqalign:
2020-11-12T01:17:09,994 * https://pypi.org/simple/rcsb-utils-seqalign/
2020-11-12T01:17:09,994 * https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/
2020-11-12T01:17:09,995 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-seqalign/
2020-11-12T01:17:09,997 Getting page https://pypi.org/simple/rcsb-utils-seqalign/
2020-11-12T01:17:10,001 Found index url https://pypi.org/simple
2020-11-12T01:17:10,326   Found link https://files.pythonhosted.org/packages/c8/dc/20ee48aa2b8d5b8f7ba02d87a4702ef388ad2c394a4215c83100d4c896c9/rcsb.utils.seqalign-0.11.tar.gz#sha256=1d467855fd6c304f2946bf763f2f0a4b19a4ed95fa044d0412607694ae03756e (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.11
2020-11-12T01:17:10,327   Found link https://files.pythonhosted.org/packages/c9/bf/b407af97089162727da9b2ad2871bbdbe45107c9c29c9115bad99bef81ad/rcsb.utils.seqalign-0.12.tar.gz#sha256=43fa21ed04ba740aabfb0ef041ed764fc8eb3524e6a60bdc64d8102e0f088164 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.12
2020-11-12T01:17:10,328   Found link https://files.pythonhosted.org/packages/ba/ee/e9c40273994fc159b3052f1841017bea6688345570f6977b40f842dd771b/rcsb.utils.seqalign-0.13.tar.gz#sha256=30164c3691c515cc3f3699f5ff8aa9bcc3ae442c993c5429e96024676f73b6b9 (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.13
2020-11-12T01:17:10,328   Found link https://files.pythonhosted.org/packages/b8/5e/8b841436c6f45b2aebfccdfc731284020c6b41acd51aecc64ffb692b6fb3/rcsb.utils.seqalign-0.14.tar.gz#sha256=5435ee3a0ec96207abb0c027d4b30d507a55ff8a1bf63be33c6ac7bd5eca213c (from https://pypi.org/simple/rcsb-utils-seqalign/), version: 0.14
2020-11-12T01:17:10,329 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/
2020-11-12T01:17:10,330 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/
2020-11-12T01:17:10,332 Found index url https://pypi.ngc.nvidia.com
2020-11-12T01:17:11,307 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-seqalign/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-seqalign/ - skipping
2020-11-12T01:17:11,326 Given no hashes to check 1 links for project 'rcsb-utils-seqalign': discarding no candidates
2020-11-12T01:17:11,329 Using version 0.14 (newest of versions: 0.14)
2020-11-12T01:17:11,338 Collecting rcsb-utils-seqalign==0.14
2020-11-12T01:17:11,343   Created temporary directory: /tmp/pip-unpack-_s_rvfp2
2020-11-12T01:17:11,603   Downloading rcsb.utils.seqalign-0.14.tar.gz (12 kB)
2020-11-12T01:17:11,729   Added rcsb-utils-seqalign==0.14 from https://files.pythonhosted.org/packages/b8/5e/8b841436c6f45b2aebfccdfc731284020c6b41acd51aecc64ffb692b6fb3/rcsb.utils.seqalign-0.14.tar.gz#sha256=5435ee3a0ec96207abb0c027d4b30d507a55ff8a1bf63be33c6ac7bd5eca213c to build tracker '/tmp/pip-req-tracker-lpbp9srd'
2020-11-12T01:17:11,733     Running setup.py (path:/tmp/pip-wheel-pd2dkats/rcsb-utils-seqalign/setup.py) egg_info for package rcsb-utils-seqalign
2020-11-12T01:17:11,735     Created temporary directory: /tmp/pip-pip-egg-info-pojbwsos
2020-11-12T01:17:11,737     Running command python setup.py egg_info
2020-11-12T01:17:13,920     running egg_info
2020-11-12T01:17:13,926     creating /tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info
2020-11-12T01:17:13,928     writing /tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/PKG-INFO
2020-11-12T01:17:13,935     writing dependency_links to /tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/dependency_links.txt
2020-11-12T01:17:13,938     writing entry points to /tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/entry_points.txt
2020-11-12T01:17:13,940     writing requirements to /tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/requires.txt
2020-11-12T01:17:13,942     writing top-level names to /tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/top_level.txt
2020-11-12T01:17:13,946     writing manifest file '/tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-12T01:17:14,323     reading manifest file '/tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-12T01:17:14,332     writing manifest file '/tmp/pip-pip-egg-info-pojbwsos/rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-12T01:17:14,467   Source in /tmp/pip-wheel-pd2dkats/rcsb-utils-seqalign has version 0.14, which satisfies requirement rcsb-utils-seqalign==0.14 from https://files.pythonhosted.org/packages/b8/5e/8b841436c6f45b2aebfccdfc731284020c6b41acd51aecc64ffb692b6fb3/rcsb.utils.seqalign-0.14.tar.gz#sha256=5435ee3a0ec96207abb0c027d4b30d507a55ff8a1bf63be33c6ac7bd5eca213c
2020-11-12T01:17:14,469   Removed rcsb-utils-seqalign==0.14 from https://files.pythonhosted.org/packages/b8/5e/8b841436c6f45b2aebfccdfc731284020c6b41acd51aecc64ffb692b6fb3/rcsb.utils.seqalign-0.14.tar.gz#sha256=5435ee3a0ec96207abb0c027d4b30d507a55ff8a1bf63be33c6ac7bd5eca213c from build tracker '/tmp/pip-req-tracker-lpbp9srd'
2020-11-12T01:17:14,473 Building wheels for collected packages: rcsb-utils-seqalign
2020-11-12T01:17:14,482   Created temporary directory: /tmp/pip-wheel-k8fg86nq
2020-11-12T01:17:14,483   Building wheel for rcsb-utils-seqalign (setup.py): started
2020-11-12T01:17:14,484   Destination directory: /tmp/pip-wheel-k8fg86nq
2020-11-12T01:17:14,485   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-pd2dkats/rcsb-utils-seqalign/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-pd2dkats/rcsb-utils-seqalign/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-k8fg86nq
2020-11-12T01:17:16,639   running bdist_wheel
2020-11-12T01:17:16,654   running build
2020-11-12T01:17:16,655   running build_py
2020-11-12T01:17:16,991   creating build
2020-11-12T01:17:16,992   creating build/lib
2020-11-12T01:17:16,993   creating build/lib/rcsb
2020-11-12T01:17:16,996   copying rcsb/__init__.py -> build/lib/rcsb
2020-11-12T01:17:17,002   creating build/lib/rcsb/utils
2020-11-12T01:17:17,004   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-11-12T01:17:17,009   creating build/lib/rcsb/utils/seqalign
2020-11-12T01:17:17,011   copying rcsb/utils/seqalign/MiscUtils.py -> build/lib/rcsb/utils/seqalign
2020-11-12T01:17:17,020   copying rcsb/utils/seqalign/__init__.py -> build/lib/rcsb/utils/seqalign
2020-11-12T01:17:17,025   copying rcsb/utils/seqalign/MMseqsUtils.py -> build/lib/rcsb/utils/seqalign
2020-11-12T01:17:17,054   installing to build/bdist.linux-armv7l/wheel
2020-11-12T01:17:17,055   running install
2020-11-12T01:17:17,057   running install_lib
2020-11-12T01:17:17,065   creating build/bdist.linux-armv7l
2020-11-12T01:17:17,066   creating build/bdist.linux-armv7l/wheel
2020-11-12T01:17:17,070   creating build/bdist.linux-armv7l/wheel/rcsb
2020-11-12T01:17:17,073   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-11-12T01:17:17,076   creating build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-12T01:17:17,079   copying build/lib/rcsb/utils/seqalign/MiscUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-12T01:17:17,090   copying build/lib/rcsb/utils/seqalign/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-12T01:17:17,096   copying build/lib/rcsb/utils/seqalign/MMseqsUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/seqalign
2020-11-12T01:17:17,103   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-11-12T01:17:17,108   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-11-12T01:17:17,111   running install_egg_info
2020-11-12T01:17:17,164   running egg_info
2020-11-12T01:17:17,165   writing rcsb.utils.seqalign.egg-info/PKG-INFO
2020-11-12T01:17:17,169   writing requirements to rcsb.utils.seqalign.egg-info/requires.txt
2020-11-12T01:17:17,172   writing entry points to rcsb.utils.seqalign.egg-info/entry_points.txt
2020-11-12T01:17:17,174   writing top-level names to rcsb.utils.seqalign.egg-info/top_level.txt
2020-11-12T01:17:17,177   writing dependency_links to rcsb.utils.seqalign.egg-info/dependency_links.txt
2020-11-12T01:17:17,191   reading manifest file 'rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-12T01:17:17,208   writing manifest file 'rcsb.utils.seqalign.egg-info/SOURCES.txt'
2020-11-12T01:17:17,211   Copying rcsb.utils.seqalign.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.seqalign-0.14-py3.5.egg-info
2020-11-12T01:17:17,248   running install_scripts
2020-11-12T01:17:17,463   creating build/bdist.linux-armv7l/wheel/rcsb.utils.seqalign-0.14.dist-info/WHEEL
2020-11-12T01:17:17,687   Building wheel for rcsb-utils-seqalign (setup.py): finished with status 'done'
2020-11-12T01:17:17,691   Created wheel for rcsb-utils-seqalign: filename=rcsb.utils.seqalign-0.14-py2.py3-none-any.whl size=13886 sha256=86c3d2572c99d05f03366a7730ba5a096c7844ed5c0e10e5a0ba0f1bbd2f93e0
2020-11-12T01:17:17,692   Stored in directory: /tmp/pip-ephem-wheel-cache-u4pf00kg/wheels/61/1d/c0/25e82749b30990f23031e8f3c8e851f208ef9f66320184df56
2020-11-12T01:17:17,696 Successfully built rcsb-utils-seqalign
2020-11-12T01:17:17,705 Removed build tracker: '/tmp/pip-req-tracker-lpbp9srd'