2020-11-21T10:39:22,723 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-11-21T10:39:23,468 Created temporary directory: /tmp/pip-ephem-wheel-cache-kgs5riac
2020-11-21T10:39:23,473 Created temporary directory: /tmp/pip-req-tracker-wb7b1xv8
2020-11-21T10:39:23,474 Initialized build tracking at /tmp/pip-req-tracker-wb7b1xv8
2020-11-21T10:39:23,474 Created build tracker: /tmp/pip-req-tracker-wb7b1xv8
2020-11-21T10:39:23,474 Entered build tracker: /tmp/pip-req-tracker-wb7b1xv8
2020-11-21T10:39:23,476 Created temporary directory: /tmp/pip-wheel-ekyj7z5n
2020-11-21T10:39:23,496 1 location(s) to search for versions of ngspeciesid:
2020-11-21T10:39:23,496 * https://pypi.org/simple/ngspeciesid/
2020-11-21T10:39:23,496 Fetching project page and analyzing links: https://pypi.org/simple/ngspeciesid/
2020-11-21T10:39:23,498 Getting page https://pypi.org/simple/ngspeciesid/
2020-11-21T10:39:23,503 Found index url https://pypi.org/simple
2020-11-21T10:39:23,836   Found link https://files.pythonhosted.org/packages/6a/36/004295f9713c4aa555a1660eedbb8b4a0149008c11717a1ee7354fe57b60/NGSpeciesID-0.0.6.tar.gz#sha256=3355c1d6ef0af87b184dd91bc6180acbeb938a22482d177363c0b5df92e5bdb8 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.6
2020-11-21T10:39:23,840   Found link https://files.pythonhosted.org/packages/7c/1a/52799599834d2cbc63ed1ca0601ce1da0e15b5cf2f141c5f3107297ee582/NGSpeciesID-0.0.7.tar.gz#sha256=12a0639e7e861dfe2f7768da8b2afb33ae4f71e3b885b4e840e2a53f3d55bccc (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.7
2020-11-21T10:39:23,843   Found link https://files.pythonhosted.org/packages/bc/06/6934c1b84d54d508104b9341c20b020da9499dc45e45e989d74c2d11895d/NGSpeciesID-0.0.8.tar.gz#sha256=c4eed7522ae000ce53f22836e72ce8bd366944eacdd1f19a164b24feed2e0e70 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8
2020-11-21T10:39:23,846   Found link https://files.pythonhosted.org/packages/ff/9a/d8d6d8f7d6d1f9f321706037c774d8526e212f9caa434a1d437daab4790c/NGSpeciesID-0.0.8.1.tar.gz#sha256=0db47cdfa14d797e508d724327feab3bf97bd9b951a1b3390916451eb4959d0a (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.1
2020-11-21T10:39:23,849   Found link https://files.pythonhosted.org/packages/7b/25/4a9b63178b237c13d86b6e26793c11cdc59bb2d37d5be811a5993587d5e7/NGSpeciesID-0.0.8.2.tar.gz#sha256=78891df6876ebe8451c3ee3216f7d239612cb9752794a6b2b4ce006be4cce219 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.2
2020-11-21T10:39:23,853   Found link https://files.pythonhosted.org/packages/93/dc/b38af0940880db8ed632646c1dc1a25e08b77609e94cebd50e15ed38de83/NGSpeciesID-0.0.8.3.tar.gz#sha256=9e227f2af24749c8024f3093ba5b75b605d6c0aebe74d376b1f2964a7ce91d1a (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.3
2020-11-21T10:39:23,856   Found link https://files.pythonhosted.org/packages/39/e1/d40090f96a93fe6d072a933488601d46d21420cd4fae6275acc5143612cc/NGSpeciesID-0.0.8.4.tar.gz#sha256=8e1192ec629ea904ff235642f2a6af1185721d14a1fe4c041112b82b7111cf5c (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.4
2020-11-21T10:39:23,859   Found link https://files.pythonhosted.org/packages/ec/07/dc75e54295ffded7699031c71eb386593a4c1a68f873324514c586bdb584/NGSpeciesID-0.0.8.5.tar.gz#sha256=fca9646553a6cc2515eb3a3a4d2a30fdf9bd1207584d7e6478c0a041cd7bce5e (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.5
2020-11-21T10:39:23,862   Found link https://files.pythonhosted.org/packages/e0/90/7c799e22046edd46142b5b2c47ef37dc083d712dede4bf543e4f00487ab8/NGSpeciesID-0.0.9.tar.gz#sha256=41b6ae2a72f81aa883739dfceb5199bbf0d6365a10a5ac0b5aa4985a507a3412 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.9
2020-11-21T10:39:23,865   Found link https://files.pythonhosted.org/packages/da/9a/4df36af60da248a8b32e1251316f1693e9076a44d780891c3c6fd42a0bf9/NGSpeciesID-0.0.9.1.tar.gz#sha256=4f4300bac0d15b234f07fb571a4ef10a3e1dafe5a36883c5df877a8608bf1a10 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.9.1
2020-11-21T10:39:23,868   Found link https://files.pythonhosted.org/packages/1a/8a/e9f06e79019630da1231974cb164239a117e6680dc38529db29f9837956e/NGSpeciesID-0.1.0.0.tar.gz#sha256=9c800922c173b86fd776285355978bed121f8d9581fdcac8652a2f66cb5d6f5b (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.1.0.0
2020-11-21T10:39:23,871   Found link https://files.pythonhosted.org/packages/e0/c6/3e1a3f50be7c81c853c5117dae8a8992c52c3c348610e0c554323541d5b5/NGSpeciesID-0.1.0.1.tar.gz#sha256=24b5c892a8d3c4b963b19eecffcc5573c52bec0833c7c9eb96de9a07b6a6117b (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.1.0.1
2020-11-21T10:39:23,886 Given no hashes to check 1 links for project 'ngspeciesid': discarding no candidates
2020-11-21T10:39:23,887 Using version 0.1.0.1 (newest of versions: 0.1.0.1)
2020-11-21T10:39:23,896 Collecting ngspeciesid==0.1.0.1
2020-11-21T10:39:23,901   Created temporary directory: /tmp/pip-unpack-31jnneex
2020-11-21T10:39:24,190   Downloading NGSpeciesID-0.1.0.1.tar.gz (545 kB)
2020-11-21T10:39:24,735   Added ngspeciesid==0.1.0.1 from https://files.pythonhosted.org/packages/e0/c6/3e1a3f50be7c81c853c5117dae8a8992c52c3c348610e0c554323541d5b5/NGSpeciesID-0.1.0.1.tar.gz#sha256=24b5c892a8d3c4b963b19eecffcc5573c52bec0833c7c9eb96de9a07b6a6117b to build tracker '/tmp/pip-req-tracker-wb7b1xv8'
2020-11-21T10:39:24,739     Running setup.py (path:/tmp/pip-wheel-ekyj7z5n/ngspeciesid/setup.py) egg_info for package ngspeciesid
2020-11-21T10:39:24,741     Created temporary directory: /tmp/pip-pip-egg-info-m73jbd9_
2020-11-21T10:39:24,742     Running command python setup.py egg_info
2020-11-21T10:39:27,203     running egg_info
2020-11-21T10:39:27,208     creating /tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info
2020-11-21T10:39:27,211     writing /tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info/PKG-INFO
2020-11-21T10:39:27,218     writing requirements to /tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info/requires.txt
2020-11-21T10:39:27,221     writing dependency_links to /tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info/dependency_links.txt
2020-11-21T10:39:27,223     writing top-level names to /tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info/top_level.txt
2020-11-21T10:39:27,227     writing manifest file '/tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info/SOURCES.txt'
2020-11-21T10:39:27,597     reading manifest file '/tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info/SOURCES.txt'
2020-11-21T10:39:27,600     reading manifest template 'MANIFEST.in'
2020-11-21T10:39:27,607     writing manifest file '/tmp/pip-pip-egg-info-m73jbd9_/NGSpeciesID.egg-info/SOURCES.txt'
2020-11-21T10:39:27,750   Source in /tmp/pip-wheel-ekyj7z5n/ngspeciesid has version 0.1.0.1, which satisfies requirement ngspeciesid==0.1.0.1 from https://files.pythonhosted.org/packages/e0/c6/3e1a3f50be7c81c853c5117dae8a8992c52c3c348610e0c554323541d5b5/NGSpeciesID-0.1.0.1.tar.gz#sha256=24b5c892a8d3c4b963b19eecffcc5573c52bec0833c7c9eb96de9a07b6a6117b
2020-11-21T10:39:27,751   Removed ngspeciesid==0.1.0.1 from https://files.pythonhosted.org/packages/e0/c6/3e1a3f50be7c81c853c5117dae8a8992c52c3c348610e0c554323541d5b5/NGSpeciesID-0.1.0.1.tar.gz#sha256=24b5c892a8d3c4b963b19eecffcc5573c52bec0833c7c9eb96de9a07b6a6117b from build tracker '/tmp/pip-req-tracker-wb7b1xv8'
2020-11-21T10:39:27,766 Building wheels for collected packages: ngspeciesid
2020-11-21T10:39:27,778   Created temporary directory: /tmp/pip-wheel-ahni76bs
2020-11-21T10:39:27,779   Building wheel for ngspeciesid (setup.py): started
2020-11-21T10:39:27,780   Destination directory: /tmp/pip-wheel-ahni76bs
2020-11-21T10:39:27,780   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ekyj7z5n/ngspeciesid/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ekyj7z5n/ngspeciesid/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ahni76bs
2020-11-21T10:39:30,188   running bdist_wheel
2020-11-21T10:39:30,204   running build
2020-11-21T10:39:30,204   running build_py
2020-11-21T10:39:30,545   creating build
2020-11-21T10:39:30,546   creating build/lib
2020-11-21T10:39:30,548   creating build/lib/modules
2020-11-21T10:39:30,551   copying modules/barcode_trimmer.py -> build/lib/modules
2020-11-21T10:39:30,556   copying modules/help_functions.py -> build/lib/modules
2020-11-21T10:39:30,561   copying modules/consensus.py -> build/lib/modules
2020-11-21T10:39:30,567   copying modules/p_minimizers_shared.py -> build/lib/modules
2020-11-21T10:39:30,738   copying modules/get_sorted_fastq_for_cluster.py -> build/lib/modules
2020-11-21T10:39:30,744   copying modules/cluster.py -> build/lib/modules
2020-11-21T10:39:30,750   copying modules/__init__.py -> build/lib/modules
2020-11-21T10:39:30,753   copying modules/parallelize.py -> build/lib/modules
2020-11-21T10:39:30,763   running build_scripts
2020-11-21T10:39:30,764   creating build/scripts-3.5
2020-11-21T10:39:30,769   copying and adjusting NGSpeciesID -> build/scripts-3.5
2020-11-21T10:39:30,775   changing mode of build/scripts-3.5/NGSpeciesID from 644 to 755
2020-11-21T10:39:30,783   installing to build/bdist.linux-armv7l/wheel
2020-11-21T10:39:30,784   running install
2020-11-21T10:39:30,786   running install_lib
2020-11-21T10:39:30,794   creating build/bdist.linux-armv7l
2020-11-21T10:39:30,795   creating build/bdist.linux-armv7l/wheel
2020-11-21T10:39:30,799   creating build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:30,801   copying build/lib/modules/barcode_trimmer.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:30,806   copying build/lib/modules/help_functions.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:30,811   copying build/lib/modules/consensus.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:30,817   copying build/lib/modules/p_minimizers_shared.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:30,994   copying build/lib/modules/get_sorted_fastq_for_cluster.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:31,000   copying build/lib/modules/cluster.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:31,009   copying build/lib/modules/__init__.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:31,014   copying build/lib/modules/parallelize.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-21T10:39:31,019   running install_egg_info
2020-11-21T10:39:31,065   running egg_info
2020-11-21T10:39:31,067   writing NGSpeciesID.egg-info/PKG-INFO
2020-11-21T10:39:31,073   writing dependency_links to NGSpeciesID.egg-info/dependency_links.txt
2020-11-21T10:39:31,076   writing top-level names to NGSpeciesID.egg-info/top_level.txt
2020-11-21T10:39:31,078   writing requirements to NGSpeciesID.egg-info/requires.txt
2020-11-21T10:39:31,089   reading manifest file 'NGSpeciesID.egg-info/SOURCES.txt'
2020-11-21T10:39:31,094   reading manifest template 'MANIFEST.in'
2020-11-21T10:39:31,101   writing manifest file 'NGSpeciesID.egg-info/SOURCES.txt'
2020-11-21T10:39:31,104   Copying NGSpeciesID.egg-info to build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.0.1-py3.5.egg-info
2020-11-21T10:39:31,133   running install_scripts
2020-11-21T10:39:31,267   creating build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.0.1.data
2020-11-21T10:39:31,267   creating build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.0.1.data/scripts
2020-11-21T10:39:31,270   copying build/scripts-3.5/NGSpeciesID -> build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.0.1.data/scripts
2020-11-21T10:39:31,276   changing mode of build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.0.1.data/scripts/NGSpeciesID to 755
2020-11-21T10:39:31,341   creating build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.0.1.dist-info/WHEEL
2020-11-21T10:39:32,123   Building wheel for ngspeciesid (setup.py): finished with status 'done'
2020-11-21T10:39:32,137   Created wheel for ngspeciesid: filename=NGSpeciesID-0.1.0.1-py2.py3-none-any.whl size=558013 sha256=fb926281262b66bffdcaf148ab73572a35733104221237f809afb8747c035fb8
2020-11-21T10:39:32,137   Stored in directory: /tmp/pip-ephem-wheel-cache-kgs5riac/wheels/b4/11/9e/ced5a32638c92c6c05c64e9c4562bbd9cb2d44784dcca97f6e
2020-11-21T10:39:32,141 Successfully built ngspeciesid
2020-11-21T10:39:32,244 Removed build tracker: '/tmp/pip-req-tracker-wb7b1xv8'