2020-11-25T20:58:50,824 Created temporary directory: /tmp/pip-ephem-wheel-cache-b4t0tp8w
2020-11-25T20:58:50,827 Created temporary directory: /tmp/pip-req-tracker-343io8g0
2020-11-25T20:58:50,828 Initialized build tracking at /tmp/pip-req-tracker-343io8g0
2020-11-25T20:58:50,828 Created build tracker: /tmp/pip-req-tracker-343io8g0
2020-11-25T20:58:50,828 Entered build tracker: /tmp/pip-req-tracker-343io8g0
2020-11-25T20:58:50,829 Created temporary directory: /tmp/pip-wheel-6vtyeu1h
2020-11-25T20:58:50,838 1 location(s) to search for versions of megalodon:
2020-11-25T20:58:50,838 * https://pypi.org/simple/megalodon/
2020-11-25T20:58:50,838 Fetching project page and analyzing links: https://pypi.org/simple/megalodon/
2020-11-25T20:58:50,839 Getting page https://pypi.org/simple/megalodon/
2020-11-25T20:58:50,841 Found index url https://pypi.org/simple
2020-11-25T20:58:50,948   Skipping link: none of the wheel's tags match: cp37-cp37m-macosx_10_14_x86_64: https://files.pythonhosted.org/packages/fe/5f/fc169f4470c2ab9a3d0dcf7b0eba0752a950494eb6587cbe3425724bcbaa/megalodon-1.0.0-cp37-cp37m-macosx_10_14_x86_64.whl#sha256=de244047d7a7d1f08a86fbed509d20eeed709187f84e765d9b9a4f5359364a30 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,949   Found link https://files.pythonhosted.org/packages/9b/94/e9a546cb3958043d7378b0d1b5eebe01ca3923db3de08a10ef230e27dff5/megalodon-1.0.0.tar.gz#sha256=a547c80eb95763ecf13fed66023953fa8fe6c98082e9e249ef0f859772f01ccc (from https://pypi.org/simple/megalodon/), version: 1.0.0
2020-11-25T20:58:50,949   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/15/da/db7e0d83c7237552d45289530e9418d460c7a994f0d2b6a1735f98f62ecf/megalodon-2.0.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=bcea1352257f402f82787a2494ebc02f35503c15edd739fe8663f1417447be13 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,949   Found link https://files.pythonhosted.org/packages/1d/e0/6a40deaac257dacfb2c31c056b37abd76e8ddfc8e852ea5117cb3d67b220/megalodon-2.0.0.tar.gz#sha256=28deb452ba87cfdf116bcdbc2e6335ab3220d363a7f545594d43c60cf8e9040c (from https://pypi.org/simple/megalodon/), version: 2.0.0
2020-11-25T20:58:50,950   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/33/7c/bfd056d9b7d5a618f61d28fe44d2402a16b6a959f9a30cd13f8dc7046e4c/megalodon-2.1.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=1052edf69302c8d018bdde48d6673c03364255acdfde0aa9938997fee66f7fbe (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,950   Found link https://files.pythonhosted.org/packages/aa/cc/b3c81dc70660c4e043180ea7535b8b42dd8724cddd784dbeb039ff2bf0c5/megalodon-2.1.0.tar.gz#sha256=1e6db96a9d14a1041b435f4cf0fdd19a0809490efd4c2d4dae7eeaa2423db3a3 (from https://pypi.org/simple/megalodon/), version: 2.1.0
2020-11-25T20:58:50,951   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/82/eb/8a50a84306188acf8c4dc1855184d652e6497a11343769b2d6b474a96d66/megalodon-2.2.0-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=d138a85f21444a1105bc8c056b92e44a3866692291d7af3d76f87dcab8f986b1 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,951   Found link https://files.pythonhosted.org/packages/74/a9/32eb1037cb5e427a433a648e02fd0e3e137d8803320858190e7b2fec74a7/megalodon-2.2.0.tar.gz#sha256=0f057644f21ce76ea8b50625e297c9f9449e0710a9423387c4d7da43b4e13115 (from https://pypi.org/simple/megalodon/), version: 2.2.0
2020-11-25T20:58:50,951   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/82/27/2831a1d28162814e76b2e8a11fce724981e8859d1bc01f6466c242c4aca8/megalodon-2.2.1-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=2cad064accda0a6aef3ac728fc3a1bdd4016145eb16cb322b542b0312cdb5cd5 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,952   Found link https://files.pythonhosted.org/packages/af/83/f12260694514be27333adb79165bc3958b59909eb21495b918a98e0e6f07/megalodon-2.2.1.tar.gz#sha256=33f3fdeae806a34fc9a0e2b3cb5b4d5bf7c1822c6eb00f9ed8a3cd2fb1327ef7 (from https://pypi.org/simple/megalodon/), version: 2.2.1
2020-11-25T20:58:50,952   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/23/94/863df7fd77e1944284db39b53c3cc1f70e0f8fcbf6986d2a88e6f4d580e8/megalodon-2.2.2-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=0d097cc1fef40f8687647b5b2762567b845af016da396720bdd831e205ee8a17 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,952   Found link https://files.pythonhosted.org/packages/9e/46/69945645195a2fb592946734e200065f4789a25d58083d8c3abf9892a81f/megalodon-2.2.2.tar.gz#sha256=e4c1e59951187bee9113cbaa34e1b7e1481cd4445e7086e05e2f87ed2fdcff4b (from https://pypi.org/simple/megalodon/), version: 2.2.2
2020-11-25T20:58:50,953   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/45/a6/2823df05db649df59c68dd45cf096fbfbfc329ef1d0f7ebec4f8d9f22aba/megalodon-2.2.3-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=5d0a7ac3aa6682e765b65ccf21287f19adb13136c5bbf1df2261d3977ae8477d (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,953   Found link https://files.pythonhosted.org/packages/4e/ef/da0e43132c1e0eb419591aa7827c4283599e58693d0b62234154b82596ae/megalodon-2.2.3.tar.gz#sha256=15da8761287df96251e08960fbf4bb1d1f2acc35ed8f824923845db78e3e1d90 (from https://pypi.org/simple/megalodon/), version: 2.2.3
2020-11-25T20:58:50,953   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/68/ae/04258dc7767930aa202d1bde4b85ab85d7198e309aeac9dd87022622feb2/megalodon-2.2.4-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=bc8f2941db875a09c831c8f9430fbef8192827ace981eb64f7dd28d3a9ee6351 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,954   Found link https://files.pythonhosted.org/packages/f2/1a/4cbec97bcedb05c100398b752bccc14078a7bb7d72e4c3dd9adf96280818/megalodon-2.2.4.tar.gz#sha256=a882b2a388c82fdcc150de46f9dc10d5253afe7e44e419896ac1c5783b50531c (from https://pypi.org/simple/megalodon/), version: 2.2.4
2020-11-25T20:58:50,954   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/19/dd/f9468b176d7205983acd0815d8e5c8c261befeac8ada2b56b1ecb993bb68/megalodon-2.2.5-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=d5997afe79945d93c64b6d7c9e43abec8e8ea6855b46d9310e591d6b80c1a1b4 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,954   Found link https://files.pythonhosted.org/packages/16/ae/a874438ab41e90ab0cef6dd27dacfdafde85d1e53919d16a6cf7179db5a0/megalodon-2.2.5.tar.gz#sha256=2e1d518defaabc15a1e95ace2738823cee1d6394066b4208527bb4d75bcf624a (from https://pypi.org/simple/megalodon/), version: 2.2.5
2020-11-25T20:58:50,955   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/a5/62/9b0b3ea25b343f382552662ebfe57635b614f8a2377ffd5023c211936cc1/megalodon-2.2.6-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=b6c509cd7e3cdf1577a133d1341b21be7ca2532da296b4be037c430f99244357 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,955   Found link https://files.pythonhosted.org/packages/e5/b2/d811ca419757cbba76ddc27bfa2d6737697ff84154452b854ed45bff00cd/megalodon-2.2.6.tar.gz#sha256=771c3a3c75ed77e5ff992ee351d7ae1b9098a9f9b0d5fd802a0dc3a917ebc309 (from https://pypi.org/simple/megalodon/), version: 2.2.6
2020-11-25T20:58:50,955   Skipping link: none of the wheel's tags match: cp36-cp36m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/c9/b4/f5d093c9af006cf796dabdbc11c1e35d948f0614ded7d2287c59edf176f5/megalodon-2.2.7-cp36-cp36m-macosx_10_9_x86_64.whl#sha256=39e7f53cf7edc33b9db185ad25d710fbb146f376c9b2a18e040532f3eabf6d22 (from https://pypi.org/simple/megalodon/)
2020-11-25T20:58:50,956   Found link https://files.pythonhosted.org/packages/8f/3a/0dddaefaafd13b422c47b29b6eb8244e063cf1913a6c93bb266f81ba28b0/megalodon-2.2.7.tar.gz#sha256=1b94f36b0832e46a357fdeaa1dd69ba8fcc12db323fec92fc82099bec561e953 (from https://pypi.org/simple/megalodon/), version: 2.2.7
2020-11-25T20:58:50,958 Given no hashes to check 1 links for project 'megalodon': discarding no candidates
2020-11-25T20:58:50,958 Using version 2.2.7 (newest of versions: 2.2.7)
2020-11-25T20:58:50,962 Collecting megalodon==2.2.7
2020-11-25T20:58:50,964   Created temporary directory: /tmp/pip-unpack-pau7scj4
2020-11-25T20:58:51,006   Downloading megalodon-2.2.7.tar.gz (8.0 MB)
2020-11-25T20:58:53,126   Added megalodon==2.2.7 from https://files.pythonhosted.org/packages/8f/3a/0dddaefaafd13b422c47b29b6eb8244e063cf1913a6c93bb266f81ba28b0/megalodon-2.2.7.tar.gz#sha256=1b94f36b0832e46a357fdeaa1dd69ba8fcc12db323fec92fc82099bec561e953 to build tracker '/tmp/pip-req-tracker-343io8g0'
2020-11-25T20:58:53,127     Running setup.py (path:/tmp/pip-wheel-6vtyeu1h/megalodon/setup.py) egg_info for package megalodon
2020-11-25T20:58:53,128     Created temporary directory: /tmp/pip-pip-egg-info-je87vgv7
2020-11-25T20:58:53,128     Running command python setup.py egg_info
2020-11-25T20:58:54,327     running egg_info
2020-11-25T20:58:54,329     creating /tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info
2020-11-25T20:58:54,330     writing /tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/PKG-INFO
2020-11-25T20:58:54,334     writing dependency_links to /tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/dependency_links.txt
2020-11-25T20:58:54,335     writing entry points to /tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/entry_points.txt
2020-11-25T20:58:54,337     writing requirements to /tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/requires.txt
2020-11-25T20:58:54,338     writing top-level names to /tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/top_level.txt
2020-11-25T20:58:54,340     writing manifest file '/tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/SOURCES.txt'
2020-11-25T20:58:54,720     reading manifest file '/tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/SOURCES.txt'
2020-11-25T20:58:54,722     reading manifest template 'MANIFEST.in'
2020-11-25T20:58:54,728     writing manifest file '/tmp/pip-pip-egg-info-je87vgv7/megalodon.egg-info/SOURCES.txt'
2020-11-25T20:58:54,830   Source in /tmp/pip-wheel-6vtyeu1h/megalodon has version 2.2.7, which satisfies requirement megalodon==2.2.7 from https://files.pythonhosted.org/packages/8f/3a/0dddaefaafd13b422c47b29b6eb8244e063cf1913a6c93bb266f81ba28b0/megalodon-2.2.7.tar.gz#sha256=1b94f36b0832e46a357fdeaa1dd69ba8fcc12db323fec92fc82099bec561e953
2020-11-25T20:58:54,831   Removed megalodon==2.2.7 from https://files.pythonhosted.org/packages/8f/3a/0dddaefaafd13b422c47b29b6eb8244e063cf1913a6c93bb266f81ba28b0/megalodon-2.2.7.tar.gz#sha256=1b94f36b0832e46a357fdeaa1dd69ba8fcc12db323fec92fc82099bec561e953 from build tracker '/tmp/pip-req-tracker-343io8g0'
2020-11-25T20:58:54,834 Building wheels for collected packages: megalodon
2020-11-25T20:58:54,838   Created temporary directory: /tmp/pip-wheel-ee4bpn79
2020-11-25T20:58:54,839   Building wheel for megalodon (setup.py): started
2020-11-25T20:58:54,839   Destination directory: /tmp/pip-wheel-ee4bpn79
2020-11-25T20:58:54,839   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-6vtyeu1h/megalodon/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-6vtyeu1h/megalodon/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ee4bpn79
2020-11-25T20:58:56,008   running bdist_wheel
2020-11-25T20:58:56,015   running build
2020-11-25T20:58:56,015   running build_py
2020-11-25T20:58:56,141   creating build
2020-11-25T20:58:56,141   creating build/lib.linux-armv7l-3.7
2020-11-25T20:58:56,142   creating build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,143   copying megalodon/fast5_io.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,146   copying megalodon/__init__.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,148   copying megalodon/mods.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,152   copying megalodon/signal_mapping.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,154   copying megalodon/__main__.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,157   copying megalodon/aggregate.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,159   copying megalodon/_version.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,161   copying megalodon/mapping.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,163   copying megalodon/megalodon_multiprocessing.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,165   copying megalodon/backends.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,169   copying megalodon/megalodon.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,173   copying megalodon/calibration.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,175   copying megalodon/logging.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,178   copying megalodon/megalodon_helper.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,181   copying megalodon/variants.py -> build/lib.linux-armv7l-3.7/megalodon
2020-11-25T20:58:56,189   creating build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,190   copying megalodon_extras/calibrate_generate_variant_stats.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,193   copying megalodon_extras/modified_bases_estimate_threshold.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,195   copying megalodon_extras/modified_bases_describe_alphabet.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,197   copying megalodon_extras/__init__.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,199   copying megalodon_extras/aggregate_run.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,201   copying megalodon_extras/phase_variants_whatshap_filter.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,204   copying megalodon_extras/calibrate_generate_modified_base_stats.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,206   copying megalodon_extras/modified_bases_create_motif_bed.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,208   copying megalodon_extras/modified_bases_per_site_thresholds.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,211   copying megalodon_extras/per_read_text_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,213   copying megalodon_extras/__main__.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,216   copying megalodon_extras/variants_index_database.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,218   copying megalodon_extras/merge_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,220   copying megalodon_extras/calibrate_merge_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,222   copying megalodon_extras/validate_results.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,225   copying megalodon_extras/merge_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,228   copying megalodon_extras/validate_compare_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,230   copying megalodon_extras/phase_variants_merge_haploid_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,233   copying megalodon_extras/variants_resolve.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,236   copying megalodon_extras/calibrate_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,238   copying megalodon_extras/merge_aggregated_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,240   copying megalodon_extras/phase_variants_extract_haplotype_reads.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,242   copying megalodon_extras/variants_atomize.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,245   copying megalodon_extras/modified_bases_create_ground_truth.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,247   copying megalodon_extras/variants_heterozygous_factor.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,249   copying megalodon_extras/_extras_parsers.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,253   copying megalodon_extras/modified_bases_index_database.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,256   copying megalodon_extras/modified_bases_update_database.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,258   copying megalodon_extras/calibrate_variants.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,260   copying megalodon_extras/modified_bases_split_by_motif.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,262   copying megalodon_extras/validate_aggregated_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,265   copying megalodon_extras/per_read_text_modified_bases.py -> build/lib.linux-armv7l-3.7/megalodon_extras
2020-11-25T20:58:56,282   creating build/lib.linux-armv7l-3.7/megalodon/model_data
2020-11-25T20:58:56,283   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:58:56,284   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:58:56,292   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:58:56,298   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:58:56,306   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:58:56,335   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-25T20:58:56,336   copying megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-25T20:58:56,345   copying megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-25T20:58:56,373   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-25T20:58:56,374   copying megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-25T20:58:56,386   copying megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-25T20:58:56,415   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:58:56,416   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:58:56,422   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:58:56,427   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:58:56,433   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:58:56,470   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,471   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,478   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,482   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,486   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,517   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:58:56,518   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:58:56,528   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:58:56,533   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:58:56,542   copying megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:58:56,566   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-25T20:58:56,567   copying megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-25T20:58:56,574   copying megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-25T20:58:56,601   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001
2020-11-25T20:58:56,602   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001
2020-11-25T20:58:56,607   copying megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001
2020-11-25T20:58:56,610   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:58:56,611   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:58:56,620   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:58:56,627   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:58:56,631   copying megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:58:56,660   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-25T20:58:56,661   copying megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-25T20:58:56,669   copying megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-25T20:58:56,692   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,694   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,701   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,705   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,709   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:58:56,731   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-25T20:58:56,732   copying megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-25T20:58:56,740   copying megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-25T20:58:56,761   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-25T20:58:56,762   copying megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-25T20:58:56,770   copying megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-25T20:58:56,794   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-25T20:58:56,796   copying megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-25T20:58:56,804   copying megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-25T20:58:56,826   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001
2020-11-25T20:58:56,827   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_v001/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001
2020-11-25T20:58:56,831   copying megalodon/model_data/res_dna_r941_min_modbases_5mC_v001/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001
2020-11-25T20:58:56,835   creating build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-25T20:58:56,836   copying megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-25T20:58:56,843   copying megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-25T20:58:56,865   creating build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001
2020-11-25T20:58:56,867   copying megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001/megalodon_mod_calibration.npz -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001
2020-11-25T20:58:56,871   copying megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001/megalodon_mod_calibration.pdf -> build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001
2020-11-25T20:58:56,877   running build_ext
2020-11-25T20:58:57,079   cythoning megalodon/_decode.pyx to megalodon/_decode.c
2020-11-25T20:58:59,709   building 'megalodon.decode' extension
2020-11-25T20:58:59,709   creating build/temp.linux-armv7l-3.7
2020-11-25T20:58:59,710   creating build/temp.linux-armv7l-3.7/megalodon
2020-11-25T20:58:59,710   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c megalodon/_decode.c -o build/temp.linux-armv7l-3.7/megalodon/_decode.o -std=c99
2020-11-25T20:59:00,452   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-11-25T20:59:00,452                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-11-25T20:59:00,453                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-11-25T20:59:00,453                    from megalodon/_decode.c:612:
2020-11-25T20:59:00,453   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-11-25T20:59:00,453    #warning "Using deprecated NumPy API, disable it with " \
2020-11-25T20:59:00,454     ^~~~~~~
2020-11-25T20:59:10,669   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/megalodon/_decode.o -o build/lib.linux-armv7l-3.7/megalodon/decode.cpython-37m-arm-linux-gnueabihf.so
2020-11-25T20:59:10,859   installing to build/bdist.linux-armv7l/wheel
2020-11-25T20:59:10,859   running install
2020-11-25T20:59:10,860   running install_lib
2020-11-25T20:59:10,865   creating build/bdist.linux-armv7l
2020-11-25T20:59:10,865   creating build/bdist.linux-armv7l/wheel
2020-11-25T20:59:10,867   creating build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,868   copying build/lib.linux-armv7l-3.7/megalodon/fast5_io.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,871   copying build/lib.linux-armv7l-3.7/megalodon/__init__.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,873   copying build/lib.linux-armv7l-3.7/megalodon/mods.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,877   copying build/lib.linux-armv7l-3.7/megalodon/signal_mapping.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,880   copying build/lib.linux-armv7l-3.7/megalodon/__main__.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,883   copying build/lib.linux-armv7l-3.7/megalodon/aggregate.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,885   copying build/lib.linux-armv7l-3.7/megalodon/_version.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:10,889   creating build/bdist.linux-armv7l/wheel/megalodon/model_data
2020-11-25T20:59:10,890   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:59:10,892   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:59:10,901   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:59:10,906   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:59:10,914   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg
2020-11-25T20:59:10,947   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-25T20:59:10,948   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-25T20:59:10,956   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast.cfg
2020-11-25T20:59:10,986   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-25T20:59:10,987   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-25T20:59:10,996   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast.cfg
2020-11-25T20:59:11,026   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:59:11,027   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:59:11,037   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:59:11,041   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:59:11,047   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg
2020-11-25T20:59:11,078   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,078   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,085   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,088   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,091   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,117   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:59:11,118   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:59:11,125   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:59:11,129   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:59:11,136   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg
2020-11-25T20:59:11,165   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-25T20:59:11,166   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-25T20:59:11,173   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac.cfg
2020-11-25T20:59:11,202   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001
2020-11-25T20:59:11,203   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001
2020-11-25T20:59:11,207   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001
2020-11-25T20:59:11,211   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:59:11,212   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:59:11,221   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:59:11,226   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:59:11,229   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg
2020-11-25T20:59:11,260   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-25T20:59:11,261   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-25T20:59:11,268   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg
2020-11-25T20:59:11,298   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,299   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,307   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,310   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,313   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg
2020-11-25T20:59:11,344   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-25T20:59:11,345   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-25T20:59:11,351   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg
2020-11-25T20:59:11,381   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-25T20:59:11,382   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-25T20:59:11,389   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_hac.cfg
2020-11-25T20:59:11,420   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-25T20:59:11,421   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-25T20:59:11,429   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg
2020-11-25T20:59:11,462   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001
2020-11-25T20:59:11,462   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001
2020-11-25T20:59:11,466   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r941_min_modbases_5mC_v001
2020-11-25T20:59:11,469   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-25T20:59:11,470   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-25T20:59:11,477   copying build/lib.linux-armv7l-3.7/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg
2020-11-25T20:59:11,513   creating build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001
2020-11-25T20:59:11,514   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001/megalodon_mod_calibration.npz -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001
2020-11-25T20:59:11,518   copying build/lib.linux-armv7l-3.7/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001/megalodon_mod_calibration.pdf -> build/bdist.linux-armv7l/wheel/megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001
2020-11-25T20:59:11,520   copying build/lib.linux-armv7l-3.7/megalodon/mapping.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,523   copying build/lib.linux-armv7l-3.7/megalodon/megalodon_multiprocessing.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,525   copying build/lib.linux-armv7l-3.7/megalodon/backends.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,530   copying build/lib.linux-armv7l-3.7/megalodon/megalodon.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,534   copying build/lib.linux-armv7l-3.7/megalodon/calibration.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,537   copying build/lib.linux-armv7l-3.7/megalodon/logging.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,539   copying build/lib.linux-armv7l-3.7/megalodon/megalodon_helper.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,543   copying build/lib.linux-armv7l-3.7/megalodon/variants.py -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,548   copying build/lib.linux-armv7l-3.7/megalodon/decode.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/megalodon
2020-11-25T20:59:11,568   creating build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,569   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_generate_variant_stats.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,572   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_estimate_threshold.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,575   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_describe_alphabet.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,577   copying build/lib.linux-armv7l-3.7/megalodon_extras/__init__.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,578   copying build/lib.linux-armv7l-3.7/megalodon_extras/aggregate_run.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,581   copying build/lib.linux-armv7l-3.7/megalodon_extras/phase_variants_whatshap_filter.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,583   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_generate_modified_base_stats.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,585   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_create_motif_bed.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,587   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_per_site_thresholds.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,590   copying build/lib.linux-armv7l-3.7/megalodon_extras/per_read_text_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,592   copying build/lib.linux-armv7l-3.7/megalodon_extras/__main__.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,595   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_index_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,597   copying build/lib.linux-armv7l-3.7/megalodon_extras/merge_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,600   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_merge_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,602   copying build/lib.linux-armv7l-3.7/megalodon_extras/validate_results.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,605   copying build/lib.linux-armv7l-3.7/megalodon_extras/merge_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,607   copying build/lib.linux-armv7l-3.7/megalodon_extras/validate_compare_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,610   copying build/lib.linux-armv7l-3.7/megalodon_extras/phase_variants_merge_haploid_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,613   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_resolve.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,616   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,618   copying build/lib.linux-armv7l-3.7/megalodon_extras/merge_aggregated_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,620   copying build/lib.linux-armv7l-3.7/megalodon_extras/phase_variants_extract_haplotype_reads.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,623   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_atomize.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,625   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_create_ground_truth.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,628   copying build/lib.linux-armv7l-3.7/megalodon_extras/variants_heterozygous_factor.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,630   copying build/lib.linux-armv7l-3.7/megalodon_extras/_extras_parsers.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,634   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_index_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,636   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_update_database.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,639   copying build/lib.linux-armv7l-3.7/megalodon_extras/calibrate_variants.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,642   copying build/lib.linux-armv7l-3.7/megalodon_extras/modified_bases_split_by_motif.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,645   copying build/lib.linux-armv7l-3.7/megalodon_extras/validate_aggregated_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,647   copying build/lib.linux-armv7l-3.7/megalodon_extras/per_read_text_modified_bases.py -> build/bdist.linux-armv7l/wheel/megalodon_extras
2020-11-25T20:59:11,649   running install_egg_info
2020-11-25T20:59:11,676   running egg_info
2020-11-25T20:59:11,676   writing megalodon.egg-info/PKG-INFO
2020-11-25T20:59:11,679   writing dependency_links to megalodon.egg-info/dependency_links.txt
2020-11-25T20:59:11,681   writing entry points to megalodon.egg-info/entry_points.txt
2020-11-25T20:59:11,683   writing requirements to megalodon.egg-info/requires.txt
2020-11-25T20:59:11,684   writing top-level names to megalodon.egg-info/top_level.txt
2020-11-25T20:59:11,708   reading manifest file 'megalodon.egg-info/SOURCES.txt'
2020-11-25T20:59:11,713   reading manifest template 'MANIFEST.in'
2020-11-25T20:59:11,724   writing manifest file 'megalodon.egg-info/SOURCES.txt'
2020-11-25T20:59:11,726   Copying megalodon.egg-info to build/bdist.linux-armv7l/wheel/megalodon-2.2.7-py3.7.egg-info
2020-11-25T20:59:11,743   running install_scripts
2020-11-25T20:59:11,813   adding license file "LICENCE.txt" (matched pattern "LICEN[CS]E*")
2020-11-25T20:59:11,821   creating build/bdist.linux-armv7l/wheel/megalodon-2.2.7.dist-info/WHEEL
2020-11-25T20:59:11,824   creating '/tmp/pip-wheel-ee4bpn79/megalodon-2.2.7-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-11-25T20:59:11,827   adding 'megalodon/__init__.py'
2020-11-25T20:59:11,830   adding 'megalodon/__main__.py'
2020-11-25T20:59:11,831   adding 'megalodon/_version.py'
2020-11-25T20:59:11,834   adding 'megalodon/aggregate.py'
2020-11-25T20:59:11,841   adding 'megalodon/backends.py'
2020-11-25T20:59:11,844   adding 'megalodon/calibration.py'
2020-11-25T20:59:11,960   adding 'megalodon/decode.cpython-37m-arm-linux-gnueabihf.so'
2020-11-25T20:59:11,966   adding 'megalodon/fast5_io.py'
2020-11-25T20:59:11,967   adding 'megalodon/logging.py'
2020-11-25T20:59:11,970   adding 'megalodon/mapping.py'
2020-11-25T20:59:11,977   adding 'megalodon/megalodon.py'
2020-11-25T20:59:11,982   adding 'megalodon/megalodon_helper.py'
2020-11-25T20:59:11,983   adding 'megalodon/megalodon_multiprocessing.py'
2020-11-25T20:59:11,995   adding 'megalodon/mods.py'
2020-11-25T20:59:11,997   adding 'megalodon/signal_mapping.py'
2020-11-25T20:59:12,009   adding 'megalodon/variants.py'
2020-11-25T20:59:12,070   adding 'megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,096   adding 'megalodon/model_data/dna_r10.3_450bps_fast.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,146   adding 'megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,174   adding 'megalodon/model_data/dna_r10.3_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,221   adding 'megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,249   adding 'megalodon/model_data/dna_r10.3_450bps_hac.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,300   adding 'megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,327   adding 'megalodon/model_data/dna_r10.3_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,386   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,413   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,468   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,495   adding 'megalodon/model_data/dna_r9.4.1_450bps_fast_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,554   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,581   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,632   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,659   adding 'megalodon/model_data/dna_r9.4.1_450bps_hac_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,669   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.npz'
2020-11-25T20:59:12,690   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_mod_calibration.pdf'
2020-11-25T20:59:12,749   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,778   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,789   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.npz'
2020-11-25T20:59:12,810   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_mod_calibration.pdf'
2020-11-25T20:59:12,865   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,894   adding 'megalodon/model_data/dna_r9.4.1_450bps_modbases_dam-dcm-cpg_hac_prom.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,901   adding 'megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001/megalodon_mod_calibration.npz'
2020-11-25T20:59:12,904   adding 'megalodon/model_data/res_dna_r103_prom_modbases_5mC_v001/megalodon_mod_calibration.pdf'
2020-11-25T20:59:12,911   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.npz'
2020-11-25T20:59:12,915   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-25T20:59:12,962   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:12,990   adding 'megalodon/model_data/res_dna_r941_min_modbases-all-context_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:12,1000   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.npz'
2020-11-25T20:59:13,021   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-25T20:59:13,077   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:13,103   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_5hmC_CpG_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:13,110   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz'
2020-11-25T20:59:13,112   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-25T20:59:13,160   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:13,187   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:13,192   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_v001/megalodon_mod_calibration.npz'
2020-11-25T20:59:13,195   adding 'megalodon/model_data/res_dna_r941_min_modbases_5mC_v001/megalodon_mod_calibration.pdf'
2020-11-25T20:59:13,199   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.npz'
2020-11-25T20:59:13,202   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_mod_calibration.pdf'
2020-11-25T20:59:13,246   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.npz'
2020-11-25T20:59:13,273   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_CpG_v001.cfg/megalodon_variant_calibration.pdf'
2020-11-25T20:59:13,279   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001/megalodon_mod_calibration.npz'
2020-11-25T20:59:13,282   adding 'megalodon/model_data/res_dna_r941_prom_modbases_5mC_v001/megalodon_mod_calibration.pdf'
2020-11-25T20:59:13,286   adding 'megalodon_extras/__init__.py'
2020-11-25T20:59:13,287   adding 'megalodon_extras/__main__.py'
2020-11-25T20:59:13,292   adding 'megalodon_extras/_extras_parsers.py'
2020-11-25T20:59:13,293   adding 'megalodon_extras/aggregate_run.py'
2020-11-25T20:59:13,295   adding 'megalodon_extras/calibrate_generate_modified_base_stats.py'
2020-11-25T20:59:13,298   adding 'megalodon_extras/calibrate_generate_variant_stats.py'
2020-11-25T20:59:13,299   adding 'megalodon_extras/calibrate_merge_modified_bases.py'
2020-11-25T20:59:13,301   adding 'megalodon_extras/calibrate_modified_bases.py'
2020-11-25T20:59:13,302   adding 'megalodon_extras/calibrate_variants.py'
2020-11-25T20:59:13,304   adding 'megalodon_extras/merge_aggregated_modified_bases.py'
2020-11-25T20:59:13,306   adding 'megalodon_extras/merge_modified_bases.py'
2020-11-25T20:59:13,307   adding 'megalodon_extras/merge_variants.py'
2020-11-25T20:59:13,309   adding 'megalodon_extras/modified_bases_create_ground_truth.py'
2020-11-25T20:59:13,310   adding 'megalodon_extras/modified_bases_create_motif_bed.py'
2020-11-25T20:59:13,311   adding 'megalodon_extras/modified_bases_describe_alphabet.py'
2020-11-25T20:59:13,312   adding 'megalodon_extras/modified_bases_estimate_threshold.py'
2020-11-25T20:59:13,314   adding 'megalodon_extras/modified_bases_index_database.py'
2020-11-25T20:59:13,316   adding 'megalodon_extras/modified_bases_per_site_thresholds.py'
2020-11-25T20:59:13,318   adding 'megalodon_extras/modified_bases_split_by_motif.py'
2020-11-25T20:59:13,319   adding 'megalodon_extras/modified_bases_update_database.py'
2020-11-25T20:59:13,320   adding 'megalodon_extras/per_read_text_modified_bases.py'
2020-11-25T20:59:13,322   adding 'megalodon_extras/per_read_text_variants.py'
2020-11-25T20:59:13,323   adding 'megalodon_extras/phase_variants_extract_haplotype_reads.py'
2020-11-25T20:59:13,325   adding 'megalodon_extras/phase_variants_merge_haploid_variants.py'
2020-11-25T20:59:13,327   adding 'megalodon_extras/phase_variants_whatshap_filter.py'
2020-11-25T20:59:13,329   adding 'megalodon_extras/validate_aggregated_modified_bases.py'
2020-11-25T20:59:13,331   adding 'megalodon_extras/validate_compare_modified_bases.py'
2020-11-25T20:59:13,334   adding 'megalodon_extras/validate_results.py'
2020-11-25T20:59:13,335   adding 'megalodon_extras/variants_atomize.py'
2020-11-25T20:59:13,337   adding 'megalodon_extras/variants_heterozygous_factor.py'
2020-11-25T20:59:13,338   adding 'megalodon_extras/variants_index_database.py'
2020-11-25T20:59:13,340   adding 'megalodon_extras/variants_resolve.py'
2020-11-25T20:59:13,342   adding 'megalodon-2.2.7.dist-info/LICENCE.txt'
2020-11-25T20:59:13,345   adding 'megalodon-2.2.7.dist-info/METADATA'
2020-11-25T20:59:13,346   adding 'megalodon-2.2.7.dist-info/WHEEL'
2020-11-25T20:59:13,347   adding 'megalodon-2.2.7.dist-info/entry_points.txt'
2020-11-25T20:59:13,348   adding 'megalodon-2.2.7.dist-info/top_level.txt'
2020-11-25T20:59:13,349   adding 'megalodon-2.2.7.dist-info/RECORD'
2020-11-25T20:59:13,508   removing build/bdist.linux-armv7l/wheel
2020-11-25T20:59:13,822   Building wheel for megalodon (setup.py): finished with status 'done'
2020-11-25T20:59:13,910   Created wheel for megalodon: filename=megalodon-2.2.7-cp37-cp37m-linux_armv7l.whl size=8207917 sha256=36b066f2052aacbb5cccdfe7dd0514550c2cb0f54fe1cc2d97ee0bf2cde48712
2020-11-25T20:59:13,910   Stored in directory: /tmp/pip-ephem-wheel-cache-b4t0tp8w/wheels/50/f9/13/d1fc5802aa3331c555418863498078173e596e773fc68b98f7
2020-11-25T20:59:13,913 Successfully built megalodon
2020-11-25T20:59:14,184 Removed build tracker: '/tmp/pip-req-tracker-343io8g0'