2020-11-26T14:27:20,398 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-11-26T14:27:21,124 Created temporary directory: /tmp/pip-ephem-wheel-cache-7peukpjd
2020-11-26T14:27:21,129 Created temporary directory: /tmp/pip-req-tracker-4762za0e
2020-11-26T14:27:21,130 Initialized build tracking at /tmp/pip-req-tracker-4762za0e
2020-11-26T14:27:21,130 Created build tracker: /tmp/pip-req-tracker-4762za0e
2020-11-26T14:27:21,131 Entered build tracker: /tmp/pip-req-tracker-4762za0e
2020-11-26T14:27:21,132 Created temporary directory: /tmp/pip-wheel-4zfbi6hn
2020-11-26T14:27:21,151 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-11-26T14:27:21,154 2 location(s) to search for versions of ngspeciesid:
2020-11-26T14:27:21,154 * https://pypi.org/simple/ngspeciesid/
2020-11-26T14:27:21,154 * https://pypi.ngc.nvidia.com/ngspeciesid/
2020-11-26T14:27:21,155 Fetching project page and analyzing links: https://pypi.org/simple/ngspeciesid/
2020-11-26T14:27:21,157 Getting page https://pypi.org/simple/ngspeciesid/
2020-11-26T14:27:21,161 Found index url https://pypi.org/simple
2020-11-26T14:27:21,506   Found link https://files.pythonhosted.org/packages/6a/36/004295f9713c4aa555a1660eedbb8b4a0149008c11717a1ee7354fe57b60/NGSpeciesID-0.0.6.tar.gz#sha256=3355c1d6ef0af87b184dd91bc6180acbeb938a22482d177363c0b5df92e5bdb8 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.6
2020-11-26T14:27:21,509   Found link https://files.pythonhosted.org/packages/7c/1a/52799599834d2cbc63ed1ca0601ce1da0e15b5cf2f141c5f3107297ee582/NGSpeciesID-0.0.7.tar.gz#sha256=12a0639e7e861dfe2f7768da8b2afb33ae4f71e3b885b4e840e2a53f3d55bccc (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.7
2020-11-26T14:27:21,513   Found link https://files.pythonhosted.org/packages/bc/06/6934c1b84d54d508104b9341c20b020da9499dc45e45e989d74c2d11895d/NGSpeciesID-0.0.8.tar.gz#sha256=c4eed7522ae000ce53f22836e72ce8bd366944eacdd1f19a164b24feed2e0e70 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8
2020-11-26T14:27:21,516   Found link https://files.pythonhosted.org/packages/ff/9a/d8d6d8f7d6d1f9f321706037c774d8526e212f9caa434a1d437daab4790c/NGSpeciesID-0.0.8.1.tar.gz#sha256=0db47cdfa14d797e508d724327feab3bf97bd9b951a1b3390916451eb4959d0a (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.1
2020-11-26T14:27:21,519   Found link https://files.pythonhosted.org/packages/7b/25/4a9b63178b237c13d86b6e26793c11cdc59bb2d37d5be811a5993587d5e7/NGSpeciesID-0.0.8.2.tar.gz#sha256=78891df6876ebe8451c3ee3216f7d239612cb9752794a6b2b4ce006be4cce219 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.2
2020-11-26T14:27:21,523   Found link https://files.pythonhosted.org/packages/93/dc/b38af0940880db8ed632646c1dc1a25e08b77609e94cebd50e15ed38de83/NGSpeciesID-0.0.8.3.tar.gz#sha256=9e227f2af24749c8024f3093ba5b75b605d6c0aebe74d376b1f2964a7ce91d1a (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.3
2020-11-26T14:27:21,526   Found link https://files.pythonhosted.org/packages/39/e1/d40090f96a93fe6d072a933488601d46d21420cd4fae6275acc5143612cc/NGSpeciesID-0.0.8.4.tar.gz#sha256=8e1192ec629ea904ff235642f2a6af1185721d14a1fe4c041112b82b7111cf5c (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.4
2020-11-26T14:27:21,529   Found link https://files.pythonhosted.org/packages/ec/07/dc75e54295ffded7699031c71eb386593a4c1a68f873324514c586bdb584/NGSpeciesID-0.0.8.5.tar.gz#sha256=fca9646553a6cc2515eb3a3a4d2a30fdf9bd1207584d7e6478c0a041cd7bce5e (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.8.5
2020-11-26T14:27:21,533   Found link https://files.pythonhosted.org/packages/e0/90/7c799e22046edd46142b5b2c47ef37dc083d712dede4bf543e4f00487ab8/NGSpeciesID-0.0.9.tar.gz#sha256=41b6ae2a72f81aa883739dfceb5199bbf0d6365a10a5ac0b5aa4985a507a3412 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.9
2020-11-26T14:27:21,536   Found link https://files.pythonhosted.org/packages/da/9a/4df36af60da248a8b32e1251316f1693e9076a44d780891c3c6fd42a0bf9/NGSpeciesID-0.0.9.1.tar.gz#sha256=4f4300bac0d15b234f07fb571a4ef10a3e1dafe5a36883c5df877a8608bf1a10 (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.9.1
2020-11-26T14:27:21,539   Found link https://files.pythonhosted.org/packages/1a/8a/e9f06e79019630da1231974cb164239a117e6680dc38529db29f9837956e/NGSpeciesID-0.1.0.0.tar.gz#sha256=9c800922c173b86fd776285355978bed121f8d9581fdcac8652a2f66cb5d6f5b (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.1.0.0
2020-11-26T14:27:21,542   Found link https://files.pythonhosted.org/packages/e0/c6/3e1a3f50be7c81c853c5117dae8a8992c52c3c348610e0c554323541d5b5/NGSpeciesID-0.1.0.1.tar.gz#sha256=24b5c892a8d3c4b963b19eecffcc5573c52bec0833c7c9eb96de9a07b6a6117b (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.1.0.1
2020-11-26T14:27:21,546   Found link https://files.pythonhosted.org/packages/34/5e/488b50455060b9519b685b2215c68194a51e24d4707d34dd07a1fed37f33/NGSpeciesID-0.1.1.0.tar.gz#sha256=7ab6afbedf5b78ee2a93790348ae0e74f76067d5dd16a82d352ab3ad15ccf41e (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.1.1.0
2020-11-26T14:27:21,549   Found link https://files.pythonhosted.org/packages/a0/1d/b85b980abd62d0ea68ecd4d2d842b75901bbc0d6feadd99ec1b1228fee8f/NGSpeciesID-0.1.1.1.tar.gz#sha256=97e463a5cfd696b9d3c4aeb9a5c9f9de3c10872bf36ec1b98dafd8f0c3a1425c (from https://pypi.org/simple/ngspeciesid/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.1.1.1
2020-11-26T14:27:21,550 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/ngspeciesid/
2020-11-26T14:27:21,551 Getting page https://pypi.ngc.nvidia.com/ngspeciesid/
2020-11-26T14:27:21,554 Found index url https://pypi.ngc.nvidia.com
2020-11-26T14:27:22,157 Could not fetch URL https://pypi.ngc.nvidia.com/ngspeciesid/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/ngspeciesid/ - skipping
2020-11-26T14:27:22,185 Given no hashes to check 1 links for project 'ngspeciesid': discarding no candidates
2020-11-26T14:27:22,187 Using version 0.1.1.1 (newest of versions: 0.1.1.1)
2020-11-26T14:27:22,195 Collecting ngspeciesid==0.1.1.1
2020-11-26T14:27:22,200   Created temporary directory: /tmp/pip-unpack-bj0tq2yy
2020-11-26T14:27:22,447   Downloading NGSpeciesID-0.1.1.1.tar.gz (546 kB)
2020-11-26T14:27:23,019   Added ngspeciesid==0.1.1.1 from https://files.pythonhosted.org/packages/a0/1d/b85b980abd62d0ea68ecd4d2d842b75901bbc0d6feadd99ec1b1228fee8f/NGSpeciesID-0.1.1.1.tar.gz#sha256=97e463a5cfd696b9d3c4aeb9a5c9f9de3c10872bf36ec1b98dafd8f0c3a1425c to build tracker '/tmp/pip-req-tracker-4762za0e'
2020-11-26T14:27:23,023     Running setup.py (path:/tmp/pip-wheel-4zfbi6hn/ngspeciesid/setup.py) egg_info for package ngspeciesid
2020-11-26T14:27:23,025     Created temporary directory: /tmp/pip-pip-egg-info-5nu2xgu9
2020-11-26T14:27:23,026     Running command python setup.py egg_info
2020-11-26T14:27:25,388     running egg_info
2020-11-26T14:27:25,393     creating /tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info
2020-11-26T14:27:25,397     writing requirements to /tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info/requires.txt
2020-11-26T14:27:25,399     writing dependency_links to /tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info/dependency_links.txt
2020-11-26T14:27:25,401     writing top-level names to /tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info/top_level.txt
2020-11-26T14:27:25,403     writing /tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info/PKG-INFO
2020-11-26T14:27:25,413     writing manifest file '/tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info/SOURCES.txt'
2020-11-26T14:27:25,796     reading manifest file '/tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info/SOURCES.txt'
2020-11-26T14:27:25,799     reading manifest template 'MANIFEST.in'
2020-11-26T14:27:25,806     writing manifest file '/tmp/pip-pip-egg-info-5nu2xgu9/NGSpeciesID.egg-info/SOURCES.txt'
2020-11-26T14:27:25,950   Source in /tmp/pip-wheel-4zfbi6hn/ngspeciesid has version 0.1.1.1, which satisfies requirement ngspeciesid==0.1.1.1 from https://files.pythonhosted.org/packages/a0/1d/b85b980abd62d0ea68ecd4d2d842b75901bbc0d6feadd99ec1b1228fee8f/NGSpeciesID-0.1.1.1.tar.gz#sha256=97e463a5cfd696b9d3c4aeb9a5c9f9de3c10872bf36ec1b98dafd8f0c3a1425c
2020-11-26T14:27:25,952   Removed ngspeciesid==0.1.1.1 from https://files.pythonhosted.org/packages/a0/1d/b85b980abd62d0ea68ecd4d2d842b75901bbc0d6feadd99ec1b1228fee8f/NGSpeciesID-0.1.1.1.tar.gz#sha256=97e463a5cfd696b9d3c4aeb9a5c9f9de3c10872bf36ec1b98dafd8f0c3a1425c from build tracker '/tmp/pip-req-tracker-4762za0e'
2020-11-26T14:27:25,961 Building wheels for collected packages: ngspeciesid
2020-11-26T14:27:25,970   Created temporary directory: /tmp/pip-wheel-ph5osuuu
2020-11-26T14:27:25,971   Building wheel for ngspeciesid (setup.py): started
2020-11-26T14:27:25,972   Destination directory: /tmp/pip-wheel-ph5osuuu
2020-11-26T14:27:25,973   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-4zfbi6hn/ngspeciesid/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-4zfbi6hn/ngspeciesid/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ph5osuuu
2020-11-26T14:27:28,315   running bdist_wheel
2020-11-26T14:27:28,331   running build
2020-11-26T14:27:28,332   running build_py
2020-11-26T14:27:28,671   creating build
2020-11-26T14:27:28,672   creating build/lib
2020-11-26T14:27:28,674   creating build/lib/modules
2020-11-26T14:27:28,677   copying modules/cluster.py -> build/lib/modules
2020-11-26T14:27:28,683   copying modules/get_sorted_fastq_for_cluster.py -> build/lib/modules
2020-11-26T14:27:28,689   copying modules/consensus.py -> build/lib/modules
2020-11-26T14:27:28,694   copying modules/parallelize.py -> build/lib/modules
2020-11-26T14:27:28,700   copying modules/barcode_trimmer.py -> build/lib/modules
2020-11-26T14:27:28,706   copying modules/p_minimizers_shared.py -> build/lib/modules
2020-11-26T14:27:28,884   copying modules/__init__.py -> build/lib/modules
2020-11-26T14:27:28,889   copying modules/help_functions.py -> build/lib/modules
2020-11-26T14:27:28,897   running build_scripts
2020-11-26T14:27:28,899   creating build/scripts-3.5
2020-11-26T14:27:28,903   copying and adjusting NGSpeciesID -> build/scripts-3.5
2020-11-26T14:27:28,908   changing mode of build/scripts-3.5/NGSpeciesID from 644 to 755
2020-11-26T14:27:28,916   installing to build/bdist.linux-armv7l/wheel
2020-11-26T14:27:28,917   running install
2020-11-26T14:27:28,919   running install_lib
2020-11-26T14:27:28,927   creating build/bdist.linux-armv7l
2020-11-26T14:27:28,928   creating build/bdist.linux-armv7l/wheel
2020-11-26T14:27:28,932   creating build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:28,934   copying build/lib/modules/cluster.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:28,941   copying build/lib/modules/get_sorted_fastq_for_cluster.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:28,948   copying build/lib/modules/consensus.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:28,955   copying build/lib/modules/parallelize.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:28,963   copying build/lib/modules/barcode_trimmer.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:28,969   copying build/lib/modules/p_minimizers_shared.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:29,147   copying build/lib/modules/__init__.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:29,151   copying build/lib/modules/help_functions.py -> build/bdist.linux-armv7l/wheel/modules
2020-11-26T14:27:29,156   running install_egg_info
2020-11-26T14:27:29,206   running egg_info
2020-11-26T14:27:29,208   writing NGSpeciesID.egg-info/PKG-INFO
2020-11-26T14:27:29,213   writing requirements to NGSpeciesID.egg-info/requires.txt
2020-11-26T14:27:29,217   writing dependency_links to NGSpeciesID.egg-info/dependency_links.txt
2020-11-26T14:27:29,219   writing top-level names to NGSpeciesID.egg-info/top_level.txt
2020-11-26T14:27:29,229   reading manifest file 'NGSpeciesID.egg-info/SOURCES.txt'
2020-11-26T14:27:29,234   reading manifest template 'MANIFEST.in'
2020-11-26T14:27:29,241   writing manifest file 'NGSpeciesID.egg-info/SOURCES.txt'
2020-11-26T14:27:29,244   Copying NGSpeciesID.egg-info to build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.1.1-py3.5.egg-info
2020-11-26T14:27:29,268   running install_scripts
2020-11-26T14:27:29,403   creating build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.1.1.data
2020-11-26T14:27:29,404   creating build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.1.1.data/scripts
2020-11-26T14:27:29,407   copying build/scripts-3.5/NGSpeciesID -> build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.1.1.data/scripts
2020-11-26T14:27:29,413   changing mode of build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.1.1.data/scripts/NGSpeciesID to 755
2020-11-26T14:27:29,476   creating build/bdist.linux-armv7l/wheel/NGSpeciesID-0.1.1.1.dist-info/WHEEL
2020-11-26T14:27:30,264   Building wheel for ngspeciesid (setup.py): finished with status 'done'
2020-11-26T14:27:30,278   Created wheel for ngspeciesid: filename=NGSpeciesID-0.1.1.1-py2.py3-none-any.whl size=558976 sha256=87ffcf2e8e690f3225744434c16af6a08c3d88b1785e96b1d7e1aed815f92d70
2020-11-26T14:27:30,279   Stored in directory: /tmp/pip-ephem-wheel-cache-7peukpjd/wheels/53/68/6a/7e5f34e8a45de3cb864fa792f0c08ce695aefa52e2a306c4f2
2020-11-26T14:27:30,283 Successfully built ngspeciesid
2020-11-26T14:27:30,386 Removed build tracker: '/tmp/pip-req-tracker-4762za0e'