2020-11-29T00:32:04,081 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-11-29T00:32:04,797 Created temporary directory: /tmp/pip-ephem-wheel-cache-o2gw04tb
2020-11-29T00:32:04,802 Created temporary directory: /tmp/pip-req-tracker-7h0r0c3k
2020-11-29T00:32:04,803 Initialized build tracking at /tmp/pip-req-tracker-7h0r0c3k
2020-11-29T00:32:04,804 Created build tracker: /tmp/pip-req-tracker-7h0r0c3k
2020-11-29T00:32:04,804 Entered build tracker: /tmp/pip-req-tracker-7h0r0c3k
2020-11-29T00:32:04,805 Created temporary directory: /tmp/pip-wheel-72fu2edp
2020-11-29T00:32:04,825 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-11-29T00:32:04,827 2 location(s) to search for versions of rcsb-utils-chemref:
2020-11-29T00:32:04,827 * https://pypi.org/simple/rcsb-utils-chemref/
2020-11-29T00:32:04,827 * https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-11-29T00:32:04,828 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chemref/
2020-11-29T00:32:04,830 Getting page https://pypi.org/simple/rcsb-utils-chemref/
2020-11-29T00:32:04,834 Found index url https://pypi.org/simple
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2020-11-29T00:32:05,355   Found link https://files.pythonhosted.org/packages/17/0c/b94d7a3b1cd65899ca5d1db68c89cf6cdad2a011cb48851b56a2380d3ca9/rcsb.utils.chemref-0.60.tar.gz#sha256=106ec2765f4c7dc0cc4fdcd40e4332f4be0d04954320b5c8a092756d8b4955fd (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.60
2020-11-29T00:32:05,356   Found link https://files.pythonhosted.org/packages/79/dc/4405e013993be98fbc73ed0154d64d0f0352d74217d7859a55bbf8b34f1b/rcsb.utils.chemref-0.61.tar.gz#sha256=d0f253457befa52fc215293d767befe3f63c786349059053f64546244ac21e94 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.61
2020-11-29T00:32:05,357 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-11-29T00:32:05,358 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-11-29T00:32:05,361 Found index url https://pypi.ngc.nvidia.com
2020-11-29T00:32:06,388 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-chemref/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-chemref/ - skipping
2020-11-29T00:32:06,434 Given no hashes to check 1 links for project 'rcsb-utils-chemref': discarding no candidates
2020-11-29T00:32:06,437 Using version 0.61 (newest of versions: 0.61)
2020-11-29T00:32:06,447 Collecting rcsb-utils-chemref==0.61
2020-11-29T00:32:06,452   Created temporary directory: /tmp/pip-unpack-5dd8zcwo
2020-11-29T00:32:06,679   Downloading rcsb.utils.chemref-0.61.tar.gz (31 kB)
2020-11-29T00:32:06,899   Added rcsb-utils-chemref==0.61 from https://files.pythonhosted.org/packages/79/dc/4405e013993be98fbc73ed0154d64d0f0352d74217d7859a55bbf8b34f1b/rcsb.utils.chemref-0.61.tar.gz#sha256=d0f253457befa52fc215293d767befe3f63c786349059053f64546244ac21e94 to build tracker '/tmp/pip-req-tracker-7h0r0c3k'
2020-11-29T00:32:06,901     Running setup.py (path:/tmp/pip-wheel-72fu2edp/rcsb-utils-chemref/setup.py) egg_info for package rcsb-utils-chemref
2020-11-29T00:32:06,903     Created temporary directory: /tmp/pip-pip-egg-info-7826f5nb
2020-11-29T00:32:06,904     Running command python setup.py egg_info
2020-11-29T00:32:09,309     running egg_info
2020-11-29T00:32:09,315     creating /tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info
2020-11-29T00:32:09,319     writing top-level names to /tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/top_level.txt
2020-11-29T00:32:09,322     writing dependency_links to /tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/dependency_links.txt
2020-11-29T00:32:09,325     writing entry points to /tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/entry_points.txt
2020-11-29T00:32:09,327     writing /tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/PKG-INFO
2020-11-29T00:32:09,332     writing requirements to /tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/requires.txt
2020-11-29T00:32:09,337     writing manifest file '/tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-11-29T00:32:09,717     reading manifest file '/tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-11-29T00:32:09,721     reading manifest template 'MANIFEST.in'
2020-11-29T00:32:09,729     writing manifest file '/tmp/pip-pip-egg-info-7826f5nb/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-11-29T00:32:09,869   Source in /tmp/pip-wheel-72fu2edp/rcsb-utils-chemref has version 0.61, which satisfies requirement rcsb-utils-chemref==0.61 from https://files.pythonhosted.org/packages/79/dc/4405e013993be98fbc73ed0154d64d0f0352d74217d7859a55bbf8b34f1b/rcsb.utils.chemref-0.61.tar.gz#sha256=d0f253457befa52fc215293d767befe3f63c786349059053f64546244ac21e94
2020-11-29T00:32:09,871   Removed rcsb-utils-chemref==0.61 from https://files.pythonhosted.org/packages/79/dc/4405e013993be98fbc73ed0154d64d0f0352d74217d7859a55bbf8b34f1b/rcsb.utils.chemref-0.61.tar.gz#sha256=d0f253457befa52fc215293d767befe3f63c786349059053f64546244ac21e94 from build tracker '/tmp/pip-req-tracker-7h0r0c3k'
2020-11-29T00:32:09,874 Building wheels for collected packages: rcsb-utils-chemref
2020-11-29T00:32:09,883   Created temporary directory: /tmp/pip-wheel-hov04gsl
2020-11-29T00:32:09,884   Building wheel for rcsb-utils-chemref (setup.py): started
2020-11-29T00:32:09,885   Destination directory: /tmp/pip-wheel-hov04gsl
2020-11-29T00:32:09,885   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-72fu2edp/rcsb-utils-chemref/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-72fu2edp/rcsb-utils-chemref/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hov04gsl
2020-11-29T00:32:12,310   running bdist_wheel
2020-11-29T00:32:12,327   running build
2020-11-29T00:32:12,328   running build_py
2020-11-29T00:32:12,671   creating build
2020-11-29T00:32:12,671   creating build/lib
2020-11-29T00:32:12,673   creating build/lib/rcsb
2020-11-29T00:32:12,676   copying rcsb/__init__.py -> build/lib/rcsb
2020-11-29T00:32:12,681   creating build/lib/rcsb/utils
2020-11-29T00:32:12,683   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-11-29T00:32:12,690   creating build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,692   copying rcsb/utils/chemref/PharosProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,698   copying rcsb/utils/chemref/DrugBankReader.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,704   copying rcsb/utils/chemref/DrugBankProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,710   copying rcsb/utils/chemref/ChemCompProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,716   copying rcsb/utils/chemref/PubChemProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,723   copying rcsb/utils/chemref/ResidReader.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,729   copying rcsb/utils/chemref/ChemCompModelProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,736   copying rcsb/utils/chemref/PubChemUtils.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,745   copying rcsb/utils/chemref/ResidProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,751   copying rcsb/utils/chemref/PsiModProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,756   copying rcsb/utils/chemref/ChEMBLProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,762   copying rcsb/utils/chemref/AtcProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,769   copying rcsb/utils/chemref/__init__.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,774   copying rcsb/utils/chemref/PharosReadSqlDump.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,779   copying rcsb/utils/chemref/CARDProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,784   copying rcsb/utils/chemref/DrugCentralProvider.py -> build/lib/rcsb/utils/chemref
2020-11-29T00:32:12,818   installing to build/bdist.linux-armv7l/wheel
2020-11-29T00:32:12,819   running install
2020-11-29T00:32:12,821   running install_lib
2020-11-29T00:32:12,829   creating build/bdist.linux-armv7l
2020-11-29T00:32:12,830   creating build/bdist.linux-armv7l/wheel
2020-11-29T00:32:12,834   creating build/bdist.linux-armv7l/wheel/rcsb
2020-11-29T00:32:12,837   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-11-29T00:32:12,841   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,843   copying build/lib/rcsb/utils/chemref/PharosProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,849   copying build/lib/rcsb/utils/chemref/DrugBankReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,854   copying build/lib/rcsb/utils/chemref/DrugBankProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,860   copying build/lib/rcsb/utils/chemref/ChemCompProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,867   copying build/lib/rcsb/utils/chemref/PubChemProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,874   copying build/lib/rcsb/utils/chemref/ResidReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,879   copying build/lib/rcsb/utils/chemref/ChemCompModelProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,884   copying build/lib/rcsb/utils/chemref/PubChemUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,894   copying build/lib/rcsb/utils/chemref/ResidProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,899   copying build/lib/rcsb/utils/chemref/PsiModProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,905   copying build/lib/rcsb/utils/chemref/ChEMBLProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,911   copying build/lib/rcsb/utils/chemref/AtcProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,918   copying build/lib/rcsb/utils/chemref/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,924   copying build/lib/rcsb/utils/chemref/PharosReadSqlDump.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,930   copying build/lib/rcsb/utils/chemref/CARDProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,936   copying build/lib/rcsb/utils/chemref/DrugCentralProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-11-29T00:32:12,941   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-11-29T00:32:12,947   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-11-29T00:32:12,951   running install_egg_info
2020-11-29T00:32:13,000   running egg_info
2020-11-29T00:32:13,003   writing rcsb.utils.chemref.egg-info/PKG-INFO
2020-11-29T00:32:13,007   writing dependency_links to rcsb.utils.chemref.egg-info/dependency_links.txt
2020-11-29T00:32:13,010   writing top-level names to rcsb.utils.chemref.egg-info/top_level.txt
2020-11-29T00:32:13,012   writing requirements to rcsb.utils.chemref.egg-info/requires.txt
2020-11-29T00:32:13,015   writing entry points to rcsb.utils.chemref.egg-info/entry_points.txt
2020-11-29T00:32:13,032   reading manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-11-29T00:32:13,040   reading manifest template 'MANIFEST.in'
2020-11-29T00:32:13,050   writing manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-11-29T00:32:13,054   Copying rcsb.utils.chemref.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.61-py3.5.egg-info
2020-11-29T00:32:13,088   running install_scripts
2020-11-29T00:32:13,295   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.61.dist-info/WHEEL
2020-11-29T00:32:13,590   Building wheel for rcsb-utils-chemref (setup.py): finished with status 'done'
2020-11-29T00:32:13,595   Created wheel for rcsb-utils-chemref: filename=rcsb.utils.chemref-0.61-py2.py3-none-any.whl size=40157 sha256=d396d1f3be1f64169648216a04a07ba84dca1cd722a611caa335e2d032bd60bb
2020-11-29T00:32:13,596   Stored in directory: /tmp/pip-ephem-wheel-cache-o2gw04tb/wheels/37/ef/d3/f0828a4575a4b987e0d6b6aa447c61a953901f7aac260c7004
2020-11-29T00:32:13,600 Successfully built rcsb-utils-chemref
2020-11-29T00:32:13,613 Removed build tracker: '/tmp/pip-req-tracker-7h0r0c3k'