2020-11-30T17:51:23,326 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-11-30T17:51:23,957 Created temporary directory: /tmp/pip-ephem-wheel-cache-et09q3tb
2020-11-30T17:51:23,961 Created temporary directory: /tmp/pip-req-tracker-lzeitz81
2020-11-30T17:51:23,962 Initialized build tracking at /tmp/pip-req-tracker-lzeitz81
2020-11-30T17:51:23,963 Created build tracker: /tmp/pip-req-tracker-lzeitz81
2020-11-30T17:51:23,963 Entered build tracker: /tmp/pip-req-tracker-lzeitz81
2020-11-30T17:51:23,964 Created temporary directory: /tmp/pip-wheel-ydbngfv_
2020-11-30T17:51:23,980 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-11-30T17:51:23,982 2 location(s) to search for versions of straintables:
2020-11-30T17:51:23,982 * https://pypi.org/simple/straintables/
2020-11-30T17:51:23,982 * https://pypi.ngc.nvidia.com/straintables/
2020-11-30T17:51:23,983 Fetching project page and analyzing links: https://pypi.org/simple/straintables/
2020-11-30T17:51:23,985 Getting page https://pypi.org/simple/straintables/
2020-11-30T17:51:23,989 Found index url https://pypi.org/simple
2020-11-30T17:51:24,307   Found link https://files.pythonhosted.org/packages/4d/5a/d75cc1d6917a6268356e27c9a80bd2d6ac0e43d2c7722a0cad75b9e8f7a0/straintables-0.92.tar.gz#sha256=1eb8101e1b08cb99e177922090da236b481d3add9975d4aff4d137cff7d60c1f (from https://pypi.org/simple/straintables/), version: 0.92
2020-11-30T17:51:24,308   Found link https://files.pythonhosted.org/packages/b2/9e/15dc0ca164fc1ef974d483e7d889c6de41b0a8a5147a71f3360a9a226d25/straintables-0.93.tar.gz#sha256=9cafecd2c797ad8b9ad92c9fdd31adb7e2a76cfb0d5ecd92bad930a47db29d33 (from https://pypi.org/simple/straintables/), version: 0.93
2020-11-30T17:51:24,308   Found link https://files.pythonhosted.org/packages/7c/bf/111071d2945a56b5d4f013d36f298698659ebadad9d634accce3ca2e3b77/straintables-0.94.tar.gz#sha256=1dd400de57694da699c5cf769165e9202f7e40e6baf9e36d0569effd017205b3 (from https://pypi.org/simple/straintables/), version: 0.94
2020-11-30T17:51:24,309   Found link https://files.pythonhosted.org/packages/dd/13/edce7f748184cbd8424cefc4b7e0e8be30eef30a57bcb5c5dd70ccf1e71b/straintables-0.95.tar.gz#sha256=451d8940aca0efe2f05137a6f25d98df8947fc08caf8c1309b227952553a878d (from https://pypi.org/simple/straintables/), version: 0.95
2020-11-30T17:51:24,310   Found link https://files.pythonhosted.org/packages/51/5e/f9aff28800c62fe499538def2d15baaffd93b089d26b40d784829ec7bf7b/straintables-0.951.tar.gz#sha256=a84de7cf565d67aa16f336247551edec01944439152d8c65112726ed71102a29 (from https://pypi.org/simple/straintables/), version: 0.951
2020-11-30T17:51:24,311   Found link https://files.pythonhosted.org/packages/13/3c/2abdcfc5ccd7971a4d1b59b8c83c9d44eb2027dadc53b56d6d5086457ccf/straintables-0.952.tar.gz#sha256=35b916990d9c441cdeb90cfcde8f9178befe15e6140545d2d4824e2b0a29a1e3 (from https://pypi.org/simple/straintables/), version: 0.952
2020-11-30T17:51:24,312   Found link https://files.pythonhosted.org/packages/10/ca/7811f876e4c921232d4d2c9854707030217e13928de88a4f1fcb5e5fcf16/straintables-0.953.tar.gz#sha256=298ae8051bffc80060bbcc55a1299979fc30d8d6e77028d94d466302b309eef9 (from https://pypi.org/simple/straintables/), version: 0.953
2020-11-30T17:51:24,312   Found link https://files.pythonhosted.org/packages/11/a9/ebeb61650cd31c828da3944c6947081f5bf75c633ef17463ee749fead529/straintables-0.954.tar.gz#sha256=e80f92bd2a815bd66f73029481be208e4073df7c2acd58e665593e70a98f2d8e (from https://pypi.org/simple/straintables/), version: 0.954
2020-11-30T17:51:24,313   Found link https://files.pythonhosted.org/packages/1e/ec/836487e4f52427e8e8c409ead6ec0ce4b81243b3ca2a32d9b8554113b5a9/straintables-0.955.tar.gz#sha256=4ad58184b2d27790750266606d9ff1d285218f7ba655f4ab8cc3904c7da79683 (from https://pypi.org/simple/straintables/), version: 0.955
2020-11-30T17:51:24,314   Found link https://files.pythonhosted.org/packages/3c/52/6293f1a3dfc80a4f42c5cb1da8d91aa28f2383115242ca1d3f3ea6107cdd/straintables-0.956.tar.gz#sha256=0f213d6108a2f106ad5dd44a23adaa11576b3804987dcfbd55b93296b83a1804 (from https://pypi.org/simple/straintables/), version: 0.956
2020-11-30T17:51:24,315   Found link https://files.pythonhosted.org/packages/1d/3a/208f575265579de8d9e094edd951d303bc6cde7916888403f838c6722289/straintables-0.957.tar.gz#sha256=a23e5e4c24c9437a7847e91890bc31eecc546df4d66f8369f3c017b33a6710eb (from https://pypi.org/simple/straintables/), version: 0.957
2020-11-30T17:51:24,316   Found link https://files.pythonhosted.org/packages/b0/3d/f1848c241c53aa51e6711d00a046a21411893289253a6cf09e1133b46eaf/straintables-0.958.tar.gz#sha256=dd448a5608e3ac33d5a5aa0ff505794187432f13aa606deabf107d605f4f5670 (from https://pypi.org/simple/straintables/), version: 0.958
2020-11-30T17:51:24,316   Found link https://files.pythonhosted.org/packages/c1/9f/c26da11cd599cf7c6f1cabe081a5f9d56f5384d14d2fdf74037fc31ab07e/straintables-0.959.tar.gz#sha256=dc172885e7fca3e649f05944eb0b1b8a9c2420d24d34506348bb302044582734 (from https://pypi.org/simple/straintables/), version: 0.959
2020-11-30T17:51:24,317   Found link https://files.pythonhosted.org/packages/8e/43/6a3ab969550e9b9d8c40071ddf769c5c42ca1845453d6a7e1d1d08cc48cd/straintables-0.990.tar.gz#sha256=688b716ae6ce29f6840196db80f2ecf83e42b87aeebdc58b996d180ba26604e1 (from https://pypi.org/simple/straintables/), version: 0.990
2020-11-30T17:51:24,318   Found link https://files.pythonhosted.org/packages/a8/f6/7443b8bef3591c9218b44bd45a672b6d1eaf114ad49276f59233215e8714/straintables-0.995.tar.gz#sha256=8f3a6dcd93b829a888f57888d515dbbc6e03659d777e1a34724cb9c1cbf8c33e (from https://pypi.org/simple/straintables/), version: 0.995
2020-11-30T17:51:24,319   Found link https://files.pythonhosted.org/packages/b6/aa/323c4c4bc6b3bb7d148334fc35553022f45db09bf1c614298af227e9b094/straintables-0.996.tar.gz#sha256=29db02e14d550ef2bb2d57fd51c31a6aa7422b4326db02aced816bb651b5365e (from https://pypi.org/simple/straintables/), version: 0.996
2020-11-30T17:51:24,319   Found link https://files.pythonhosted.org/packages/16/57/e6a5091e8b5470bc9d6cf3b69b410d2a5cab8d843c1782ddfa74e5df18da/straintables-1.0.tar.gz#sha256=2a0ee4385491f9ea4511663862548dd364aa2edc5013d34a684938335db18ff0 (from https://pypi.org/simple/straintables/), version: 1.0
2020-11-30T17:51:24,320   Found link https://files.pythonhosted.org/packages/ec/bf/9e0469aab5d39bb5a5e6e64d019bf40e4a7a2a4413349697389624358aba/straintables-1.1.tar.gz#sha256=3aec2ad4894f68707c96995961626a1fb8feb5f8a9d7050ecdd9d8ce3a2399f8 (from https://pypi.org/simple/straintables/), version: 1.1
2020-11-30T17:51:24,321   Found link https://files.pythonhosted.org/packages/71/40/27c8b1a16aab3cc468d15d31a505662a467d813df1a1b7bb01ad09f75a94/straintables-1.3.tar.gz#sha256=6a771f6e40ae565f1241fe263fbce8f078b15a2c980ea05cf29c3db51e8747fa (from https://pypi.org/simple/straintables/), version: 1.3
2020-11-30T17:51:24,322   Found link https://files.pythonhosted.org/packages/5d/e2/3a681d075ac68ee6b5fce89b0095cd122a3b940e5895510999c4d128b2d5/straintables-1.4.tar.gz#sha256=2e376c493680cb5418fd76868b7c0de1544d7e4b6017b6170e5246c623eb4a07 (from https://pypi.org/simple/straintables/), version: 1.4
2020-11-30T17:51:24,323   Found link https://files.pythonhosted.org/packages/5b/98/5aff96a36202f76317887d046ec8f71aeb9931a9e28f459e93518ef61133/straintables-1.41.tar.gz#sha256=2864d5695f89e01d9ba8ea546cc08d8ca81ee7f59b0be2ff7ecf173f7bdd55cb (from https://pypi.org/simple/straintables/), version: 1.41
2020-11-30T17:51:24,323   Found link https://files.pythonhosted.org/packages/1d/e7/cb3e0721be6ed0f53b28472d97f00d8de850e7cc41bb86802d894b48e7b1/straintables-1.42.tar.gz#sha256=8d08f99eab53a3f36f980bca1851d2755941eb89aa283978621ef61c2a3487f1 (from https://pypi.org/simple/straintables/), version: 1.42
2020-11-30T17:51:24,324   Found link https://files.pythonhosted.org/packages/74/5e/db2058c2813d418c0bd4d4e313ab99b7783bf1fe4cef18f416fa1b580ca3/straintables-1.50.tar.gz#sha256=972c3c0980c14a0ed1748ecef2663ca4bb906c499c49231e27b82fe848505162 (from https://pypi.org/simple/straintables/), version: 1.50
2020-11-30T17:51:24,325   Found link https://files.pythonhosted.org/packages/93/66/34778473f760233469d8f6a7e7723f7ed351c6f0fceb235e2f0a83562d5d/straintables-1.52.tar.gz#sha256=531fec548340a3c1035d93dfcce6da10412b368fe4e447f6d4454846dddc944f (from https://pypi.org/simple/straintables/), version: 1.52
2020-11-30T17:51:24,326   Found link https://files.pythonhosted.org/packages/76/75/d141845ca23e87c10a71fb4ba920c7568ee32fc8b9a3b64d135223f32437/straintables-1.53.tar.gz#sha256=8478768a5949c98ce3389cc1f50a54272891328f0e49caa3377ec5ee7a90b7f8 (from https://pypi.org/simple/straintables/), version: 1.53
2020-11-30T17:51:24,326   Found link https://files.pythonhosted.org/packages/dd/25/98dc9ee69c0dd7279ac21a475d9c1cfd92a88a40ca143f6d490189ebb49c/straintables-1.55.tar.gz#sha256=bc718eb3534a63e3a64976a3c0dc8e4a591f0b18ec632a7c1ecdca3eb3319f95 (from https://pypi.org/simple/straintables/), version: 1.55
2020-11-30T17:51:24,327 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/straintables/
2020-11-30T17:51:24,328 Getting page https://pypi.ngc.nvidia.com/straintables/
2020-11-30T17:51:24,330 Found index url https://pypi.ngc.nvidia.com
2020-11-30T17:51:25,314 Could not fetch URL https://pypi.ngc.nvidia.com/straintables/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/straintables/ - skipping
2020-11-30T17:51:25,347 Given no hashes to check 1 links for project 'straintables': discarding no candidates
2020-11-30T17:51:25,349 Using version 1.55 (newest of versions: 1.55)
2020-11-30T17:51:25,357 Collecting straintables==1.55
2020-11-30T17:51:25,361   Created temporary directory: /tmp/pip-unpack-qrmbk3c9
2020-11-30T17:51:25,577   Downloading straintables-1.55.tar.gz (119 kB)
2020-11-30T17:51:25,894   Added straintables==1.55 from https://files.pythonhosted.org/packages/dd/25/98dc9ee69c0dd7279ac21a475d9c1cfd92a88a40ca143f6d490189ebb49c/straintables-1.55.tar.gz#sha256=bc718eb3534a63e3a64976a3c0dc8e4a591f0b18ec632a7c1ecdca3eb3319f95 to build tracker '/tmp/pip-req-tracker-lzeitz81'
2020-11-30T17:51:25,896     Running setup.py (path:/tmp/pip-wheel-ydbngfv_/straintables/setup.py) egg_info for package straintables
2020-11-30T17:51:25,897     Created temporary directory: /tmp/pip-pip-egg-info-be6stj0d
2020-11-30T17:51:25,898     Running command python setup.py egg_info
2020-11-30T17:51:28,081     running egg_info
2020-11-30T17:51:28,086     creating /tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info
2020-11-30T17:51:28,089     writing requirements to /tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/requires.txt
2020-11-30T17:51:28,092     writing top-level names to /tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/top_level.txt
2020-11-30T17:51:28,093     writing /tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/PKG-INFO
2020-11-30T17:51:28,097     writing entry points to /tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/entry_points.txt
2020-11-30T17:51:28,099     writing dependency_links to /tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/dependency_links.txt
2020-11-30T17:51:28,102     writing manifest file '/tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/SOURCES.txt'
2020-11-30T17:51:28,424     reading manifest file '/tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/SOURCES.txt'
2020-11-30T17:51:28,426     reading manifest template 'MANIFEST.in'
2020-11-30T17:51:28,436     writing manifest file '/tmp/pip-pip-egg-info-be6stj0d/straintables.egg-info/SOURCES.txt'
2020-11-30T17:51:28,563   Source in /tmp/pip-wheel-ydbngfv_/straintables has version 1.55, which satisfies requirement straintables==1.55 from https://files.pythonhosted.org/packages/dd/25/98dc9ee69c0dd7279ac21a475d9c1cfd92a88a40ca143f6d490189ebb49c/straintables-1.55.tar.gz#sha256=bc718eb3534a63e3a64976a3c0dc8e4a591f0b18ec632a7c1ecdca3eb3319f95
2020-11-30T17:51:28,564   Removed straintables==1.55 from https://files.pythonhosted.org/packages/dd/25/98dc9ee69c0dd7279ac21a475d9c1cfd92a88a40ca143f6d490189ebb49c/straintables-1.55.tar.gz#sha256=bc718eb3534a63e3a64976a3c0dc8e4a591f0b18ec632a7c1ecdca3eb3319f95 from build tracker '/tmp/pip-req-tracker-lzeitz81'
2020-11-30T17:51:28,567 Building wheels for collected packages: straintables
2020-11-30T17:51:28,573   Created temporary directory: /tmp/pip-wheel-54brdtfw
2020-11-30T17:51:28,574   Building wheel for straintables (setup.py): started
2020-11-30T17:51:28,575   Destination directory: /tmp/pip-wheel-54brdtfw
2020-11-30T17:51:28,575   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ydbngfv_/straintables/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ydbngfv_/straintables/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-54brdtfw
2020-11-30T17:51:30,726   running bdist_wheel
2020-11-30T17:51:30,740   running build
2020-11-30T17:51:30,740   running build_py
2020-11-30T17:51:31,033   creating build
2020-11-30T17:51:31,034   creating build/lib
2020-11-30T17:51:31,035   creating build/lib/straintables
2020-11-30T17:51:31,037   copying straintables/updateAmpliconScores.py -> build/lib/straintables
2020-11-30T17:51:31,040   copying straintables/InputFile.py -> build/lib/straintables
2020-11-30T17:51:31,043   copying straintables/OutputFile.py -> build/lib/straintables
2020-11-30T17:51:31,046   copying straintables/__init__.py -> build/lib/straintables
2020-11-30T17:51:31,049   copying straintables/Definitions.py -> build/lib/straintables
2020-11-30T17:51:31,052   copying straintables/alignmentData.py -> build/lib/straintables
2020-11-30T17:51:31,056   copying straintables/evaluateRecombinator.py -> build/lib/straintables
2020-11-30T17:51:31,059   copying straintables/logo.py -> build/lib/straintables
2020-11-30T17:51:31,064   creating build/lib/straintables/Executable
2020-11-30T17:51:31,066   copying straintables/Executable/Protein.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,070   copying straintables/Executable/matrixAnalysis.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,073   copying straintables/Executable/detectMutations.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,077   copying straintables/Executable/Straintables.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,079   copying straintables/Executable/BlastAmplicons.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,082   copying straintables/Executable/compareHeatmap.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,085   copying straintables/Executable/__init__.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,088   copying straintables/Executable/initializePrimerFile.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,092   copying straintables/Executable/GenomePipeline.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,096   copying straintables/Executable/NCBIDownload.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,102   copying straintables/Executable/WebViewer.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,108   copying straintables/Executable/primerFinder.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,113   copying straintables/Executable/FastaPipeline.py -> build/lib/straintables/Executable
2020-11-30T17:51:31,119   creating build/lib/straintables/Viewer
2020-11-30T17:51:31,120   copying straintables/Viewer/dissimilarityCluster.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,124   copying straintables/Viewer/plotViewport.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,128   copying straintables/Viewer/MatrixLabelGroup.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,131   copying straintables/Viewer/matrixOperations.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,134   copying straintables/Viewer/mapBar.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,139   copying straintables/Viewer/__init__.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,144   copying straintables/Viewer/MatrixPlot.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,149   copying straintables/Viewer/button_icons.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,158   copying straintables/Viewer/ideogram.py -> build/lib/straintables/Viewer
2020-11-30T17:51:31,166   creating build/lib/straintables/PrimerEngine
2020-11-30T17:51:31,168   copying straintables/PrimerEngine/PrimerDesign.py -> build/lib/straintables/PrimerEngine
2020-11-30T17:51:31,174   copying straintables/PrimerEngine/ampliconSanity.py -> build/lib/straintables/PrimerEngine
2020-11-30T17:51:31,178   copying straintables/PrimerEngine/GeneticEntities.py -> build/lib/straintables/PrimerEngine
2020-11-30T17:51:31,181   copying straintables/PrimerEngine/__init__.py -> build/lib/straintables/PrimerEngine
2020-11-30T17:51:31,184   copying straintables/PrimerEngine/RealPrimers.py -> build/lib/straintables/PrimerEngine
2020-11-30T17:51:31,187   copying straintables/PrimerEngine/PrimerDock.py -> build/lib/straintables/PrimerEngine
2020-11-30T17:51:31,192   creating build/lib/straintables/DrawGraphics
2020-11-30T17:51:31,193   copying straintables/DrawGraphics/__init__.py -> build/lib/straintables/DrawGraphics
2020-11-30T17:51:31,197   copying straintables/DrawGraphics/drawTree.py -> build/lib/straintables/DrawGraphics
2020-11-30T17:51:31,202   copying straintables/DrawGraphics/geneGraphs.py -> build/lib/straintables/DrawGraphics
2020-11-30T17:51:31,209   creating build/lib/straintables/Database
2020-11-30T17:51:31,212   copying straintables/Database/annotationManager.py -> build/lib/straintables/Database
2020-11-30T17:51:31,217   copying straintables/Database/directoryManager.py -> build/lib/straintables/Database
2020-11-30T17:51:31,220   copying straintables/Database/__init__.py -> build/lib/straintables/Database
2020-11-30T17:51:31,223   copying straintables/Database/StrainNames.py -> build/lib/straintables/Database
2020-11-30T17:51:31,226   copying straintables/Database/genomeManager.py -> build/lib/straintables/Database
2020-11-30T17:51:31,230   creating build/lib/straintables/skdistance
2020-11-30T17:51:31,232   copying straintables/skdistance/_bioenv.py -> build/lib/straintables/skdistance
2020-11-30T17:51:31,236   copying straintables/skdistance/__init__.py -> build/lib/straintables/skdistance
2020-11-30T17:51:31,239   copying straintables/skdistance/_mantel.py -> build/lib/straintables/skdistance
2020-11-30T17:51:31,244   copying straintables/skdistance/_anosim.py -> build/lib/straintables/skdistance
2020-11-30T17:51:31,248   copying straintables/skdistance/_permanova.py -> build/lib/straintables/skdistance
2020-11-30T17:51:31,251   copying straintables/skdistance/_base.py -> build/lib/straintables/skdistance
2020-11-30T17:51:31,257   copying straintables/skdistance/_permdisp.py -> build/lib/straintables/skdistance
2020-11-30T17:51:31,264   creating build/lib/straintables/DistanceEngine
2020-11-30T17:51:31,266   copying straintables/DistanceEngine/__init__.py -> build/lib/straintables/DistanceEngine
2020-11-30T17:51:31,271   copying straintables/DistanceEngine/Distance.py -> build/lib/straintables/DistanceEngine
2020-11-30T17:51:31,275   running egg_info
2020-11-30T17:51:31,303   writing entry points to straintables.egg-info/entry_points.txt
2020-11-30T17:51:31,305   writing straintables.egg-info/PKG-INFO
2020-11-30T17:51:31,308   writing dependency_links to straintables.egg-info/dependency_links.txt
2020-11-30T17:51:31,310   writing requirements to straintables.egg-info/requires.txt
2020-11-30T17:51:31,312   writing top-level names to straintables.egg-info/top_level.txt
2020-11-30T17:51:31,330   reading manifest file 'straintables.egg-info/SOURCES.txt'
2020-11-30T17:51:31,336   reading manifest template 'MANIFEST.in'
2020-11-30T17:51:31,347   writing manifest file 'straintables.egg-info/SOURCES.txt'
2020-11-30T17:51:31,376   installing to build/bdist.linux-armv7l/wheel
2020-11-30T17:51:31,377   running install
2020-11-30T17:51:31,379   running install_lib
2020-11-30T17:51:31,386   creating build/bdist.linux-armv7l
2020-11-30T17:51:31,386   creating build/bdist.linux-armv7l/wheel
2020-11-30T17:51:31,389   creating build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,391   copying build/lib/straintables/updateAmpliconScores.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,396   creating build/bdist.linux-armv7l/wheel/straintables/PrimerEngine
2020-11-30T17:51:31,397   copying build/lib/straintables/PrimerEngine/PrimerDesign.py -> build/bdist.linux-armv7l/wheel/straintables/PrimerEngine
2020-11-30T17:51:31,401   copying build/lib/straintables/PrimerEngine/ampliconSanity.py -> build/bdist.linux-armv7l/wheel/straintables/PrimerEngine
2020-11-30T17:51:31,406   copying build/lib/straintables/PrimerEngine/GeneticEntities.py -> build/bdist.linux-armv7l/wheel/straintables/PrimerEngine
2020-11-30T17:51:31,410   copying build/lib/straintables/PrimerEngine/__init__.py -> build/bdist.linux-armv7l/wheel/straintables/PrimerEngine
2020-11-30T17:51:31,415   copying build/lib/straintables/PrimerEngine/RealPrimers.py -> build/bdist.linux-armv7l/wheel/straintables/PrimerEngine
2020-11-30T17:51:31,420   copying build/lib/straintables/PrimerEngine/PrimerDock.py -> build/bdist.linux-armv7l/wheel/straintables/PrimerEngine
2020-11-30T17:51:31,426   creating build/bdist.linux-armv7l/wheel/straintables/DrawGraphics
2020-11-30T17:51:31,427   copying build/lib/straintables/DrawGraphics/__init__.py -> build/bdist.linux-armv7l/wheel/straintables/DrawGraphics
2020-11-30T17:51:31,431   copying build/lib/straintables/DrawGraphics/drawTree.py -> build/bdist.linux-armv7l/wheel/straintables/DrawGraphics
2020-11-30T17:51:31,434   copying build/lib/straintables/DrawGraphics/geneGraphs.py -> build/bdist.linux-armv7l/wheel/straintables/DrawGraphics
2020-11-30T17:51:31,439   creating build/bdist.linux-armv7l/wheel/straintables/DistanceEngine
2020-11-30T17:51:31,440   copying build/lib/straintables/DistanceEngine/__init__.py -> build/bdist.linux-armv7l/wheel/straintables/DistanceEngine
2020-11-30T17:51:31,444   copying build/lib/straintables/DistanceEngine/Distance.py -> build/bdist.linux-armv7l/wheel/straintables/DistanceEngine
2020-11-30T17:51:31,448   creating build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,449   copying build/lib/straintables/skdistance/_bioenv.py -> build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,453   copying build/lib/straintables/skdistance/__init__.py -> build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,457   copying build/lib/straintables/skdistance/_mantel.py -> build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,461   copying build/lib/straintables/skdistance/_anosim.py -> build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,465   copying build/lib/straintables/skdistance/_permanova.py -> build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,469   copying build/lib/straintables/skdistance/_base.py -> build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,474   copying build/lib/straintables/skdistance/_permdisp.py -> build/bdist.linux-armv7l/wheel/straintables/skdistance
2020-11-30T17:51:31,478   copying build/lib/straintables/InputFile.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,481   copying build/lib/straintables/OutputFile.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,484   copying build/lib/straintables/__init__.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,488   creating build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,490   copying build/lib/straintables/Executable/Protein.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,494   copying build/lib/straintables/Executable/matrixAnalysis.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,498   copying build/lib/straintables/Executable/detectMutations.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,501   copying build/lib/straintables/Executable/Straintables.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,504   copying build/lib/straintables/Executable/BlastAmplicons.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,507   copying build/lib/straintables/Executable/compareHeatmap.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,510   copying build/lib/straintables/Executable/__init__.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,513   copying build/lib/straintables/Executable/initializePrimerFile.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,517   copying build/lib/straintables/Executable/GenomePipeline.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,520   copying build/lib/straintables/Executable/NCBIDownload.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,525   copying build/lib/straintables/Executable/WebViewer.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,531   copying build/lib/straintables/Executable/primerFinder.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,537   copying build/lib/straintables/Executable/FastaPipeline.py -> build/bdist.linux-armv7l/wheel/straintables/Executable
2020-11-30T17:51:31,541   copying build/lib/straintables/Definitions.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,546   copying build/lib/straintables/alignmentData.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,549   copying build/lib/straintables/evaluateRecombinator.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,553   creating build/bdist.linux-armv7l/wheel/straintables/Database
2020-11-30T17:51:31,555   copying build/lib/straintables/Database/annotationManager.py -> build/bdist.linux-armv7l/wheel/straintables/Database
2020-11-30T17:51:31,558   copying build/lib/straintables/Database/directoryManager.py -> build/bdist.linux-armv7l/wheel/straintables/Database
2020-11-30T17:51:31,562   copying build/lib/straintables/Database/__init__.py -> build/bdist.linux-armv7l/wheel/straintables/Database
2020-11-30T17:51:31,565   copying build/lib/straintables/Database/StrainNames.py -> build/bdist.linux-armv7l/wheel/straintables/Database
2020-11-30T17:51:31,569   copying build/lib/straintables/Database/genomeManager.py -> build/bdist.linux-armv7l/wheel/straintables/Database
2020-11-30T17:51:31,574   copying build/lib/straintables/logo.py -> build/bdist.linux-armv7l/wheel/straintables
2020-11-30T17:51:31,580   creating build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,582   copying build/lib/straintables/Viewer/dissimilarityCluster.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,588   copying build/lib/straintables/Viewer/plotViewport.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,591   copying build/lib/straintables/Viewer/MatrixLabelGroup.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,595   copying build/lib/straintables/Viewer/matrixOperations.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,598   copying build/lib/straintables/Viewer/mapBar.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,601   copying build/lib/straintables/Viewer/__init__.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,604   copying build/lib/straintables/Viewer/MatrixPlot.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,609   copying build/lib/straintables/Viewer/button_icons.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,617   copying build/lib/straintables/Viewer/ideogram.py -> build/bdist.linux-armv7l/wheel/straintables/Viewer
2020-11-30T17:51:31,622   running install_egg_info
2020-11-30T17:51:31,639   Copying straintables.egg-info to build/bdist.linux-armv7l/wheel/straintables-1.55-py3.5.egg-info
2020-11-30T17:51:31,660   running install_scripts
2020-11-30T17:51:31,844   creating build/bdist.linux-armv7l/wheel/straintables-1.55.dist-info/WHEEL
2020-11-30T17:51:32,256   Building wheel for straintables (setup.py): finished with status 'done'
2020-11-30T17:51:32,261   Created wheel for straintables: filename=straintables-1.55-py3-none-any.whl size=134920 sha256=6e4f5b085daeb654f0ff370aa3fe65e6112c026aa9ce7891f83e2a8caac4401e
2020-11-30T17:51:32,262   Stored in directory: /tmp/pip-ephem-wheel-cache-et09q3tb/wheels/a4/d2/03/13bc1f20a094d2c0d6da89e0026401f7f949507827771ec992
2020-11-30T17:51:32,265 Successfully built straintables
2020-11-30T17:51:32,406 Removed build tracker: '/tmp/pip-req-tracker-lzeitz81'