2020-12-01T10:06:42,291 Created temporary directory: /tmp/pip-ephem-wheel-cache-qrqbd38n 2020-12-01T10:06:42,294 Created temporary directory: /tmp/pip-req-tracker-x5s56jxg 2020-12-01T10:06:42,294 Initialized build tracking at /tmp/pip-req-tracker-x5s56jxg 2020-12-01T10:06:42,295 Created build tracker: /tmp/pip-req-tracker-x5s56jxg 2020-12-01T10:06:42,295 Entered build tracker: /tmp/pip-req-tracker-x5s56jxg 2020-12-01T10:06:42,295 Created temporary directory: /tmp/pip-wheel-_kwdxvq2 2020-12-01T10:06:42,305 1 location(s) to search for versions of cidc-ngs-pipeline-api: 2020-12-01T10:06:42,305 * https://pypi.org/simple/cidc-ngs-pipeline-api/ 2020-12-01T10:06:42,305 Fetching project page and analyzing links: https://pypi.org/simple/cidc-ngs-pipeline-api/ 2020-12-01T10:06:42,306 Getting page https://pypi.org/simple/cidc-ngs-pipeline-api/ 2020-12-01T10:06:42,308 Found index url https://pypi.org/simple 2020-12-01T10:06:42,402 Found link https://files.pythonhosted.org/packages/eb/72/048ba0fefabe1a6113dda9f0dd2ef49e48baa3a2192a383fe0f7f81c301b/cidc_ngs_pipeline_api-0.1.0.tar.gz#sha256=329a3c40250acbbac0c692c3c54241917546105fd227df9994c1fcf2da42bff5 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.0 2020-12-01T10:06:42,403 Found link https://files.pythonhosted.org/packages/9c/a5/33b4625004f55b0de43870d1ed4d15a1a006f7007e8653c70966254a7ea7/cidc_ngs_pipeline_api-0.1.1.tar.gz#sha256=0e0f6e94e05b22145c5a47573bfd5d58449bf7e4f87cf552b7cadfdabf9863ea (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.1 2020-12-01T10:06:42,404 Found link https://files.pythonhosted.org/packages/53/7f/eea842e5d587200410294d40f7917fc2c62dee8956547bfb89bafb00d6e7/cidc_ngs_pipeline_api-0.1.2.tar.gz#sha256=79c4b9690bec471648278566682a9f09ffc71a2c5eb57e57741ea359f87ab4af (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.2 2020-12-01T10:06:42,404 Found link https://files.pythonhosted.org/packages/28/b3/a8ee852b1bec956480c6c975bf61b08be23c22abc84c0111b1312d528dc1/cidc_ngs_pipeline_api-0.1.3.tar.gz#sha256=c2a9197d8f020fed8914b0c6e505d7793ba82cde83a9d0746631a735efb93801 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.3 2020-12-01T10:06:42,405 Found link https://files.pythonhosted.org/packages/bf/42/6b9fc81f0540d796a21cfae33bf3cb1607a962997764dfd9bc97ecadd002/cidc_ngs_pipeline_api-0.1.4.tar.gz#sha256=cfa762fbd4acceadc1a60134ac0828d263ea97f3e55cb2a4ba4de060fb7682d6 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.4 2020-12-01T10:06:42,406 Found link https://files.pythonhosted.org/packages/16/30/28d09cf5bea6cee5bab4e2c4a0105648372be2e13cf85735c6dd0da2ac73/cidc_ngs_pipeline_api-0.1.5.tar.gz#sha256=7f1918b7ab1eff39c43b99f54bd80fe136257ded8883022a86f4f85bda4d905c (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.5 2020-12-01T10:06:42,406 Found link https://files.pythonhosted.org/packages/9b/0e/35c8e8177092fc1576ae22518fdc5d10388800441a58c277fe9c9b132bbc/cidc_ngs_pipeline_api-0.1.6.tar.gz#sha256=486eee7c3b727941787aeffaeed36c28cdde5c0eec271834b822e322a59498e8 (from https://pypi.org/simple/cidc-ngs-pipeline-api/) (requires-python:>=3.6), version: 0.1.6 2020-12-01T10:06:42,411 Given no hashes to check 1 links for project 'cidc-ngs-pipeline-api': discarding no candidates 2020-12-01T10:06:42,412 Using version 0.1.6 (newest of versions: 0.1.6) 2020-12-01T10:06:42,415 Collecting cidc-ngs-pipeline-api==0.1.6 2020-12-01T10:06:42,417 Created temporary directory: /tmp/pip-unpack-sxrkv23r 2020-12-01T10:06:42,467 Downloading cidc_ngs_pipeline_api-0.1.6.tar.gz (2.3 MB) 2020-12-01T10:06:43,138 Added cidc-ngs-pipeline-api==0.1.6 from https://files.pythonhosted.org/packages/9b/0e/35c8e8177092fc1576ae22518fdc5d10388800441a58c277fe9c9b132bbc/cidc_ngs_pipeline_api-0.1.6.tar.gz#sha256=486eee7c3b727941787aeffaeed36c28cdde5c0eec271834b822e322a59498e8 to build tracker '/tmp/pip-req-tracker-x5s56jxg' 2020-12-01T10:06:43,139 Running setup.py (path:/tmp/pip-wheel-_kwdxvq2/cidc-ngs-pipeline-api/setup.py) egg_info for package cidc-ngs-pipeline-api 2020-12-01T10:06:43,139 Created temporary directory: /tmp/pip-pip-egg-info-36727k45 2020-12-01T10:06:43,140 Running command python setup.py egg_info 2020-12-01T10:06:44,045 running egg_info 2020-12-01T10:06:44,047 creating /tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info 2020-12-01T10:06:44,048 writing /tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info/PKG-INFO 2020-12-01T10:06:44,052 writing dependency_links to /tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info/dependency_links.txt 2020-12-01T10:06:44,055 writing requirements to /tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info/requires.txt 2020-12-01T10:06:44,056 writing top-level names to /tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info/top_level.txt 2020-12-01T10:06:44,058 writing manifest file '/tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-12-01T10:06:44,197 reading manifest file '/tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-12-01T10:06:44,199 reading manifest template 'MANIFEST.in' 2020-12-01T10:06:44,206 writing manifest file '/tmp/pip-pip-egg-info-36727k45/cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-12-01T10:06:44,268 Source in /tmp/pip-wheel-_kwdxvq2/cidc-ngs-pipeline-api has version 0.1.6, which satisfies requirement cidc-ngs-pipeline-api==0.1.6 from https://files.pythonhosted.org/packages/9b/0e/35c8e8177092fc1576ae22518fdc5d10388800441a58c277fe9c9b132bbc/cidc_ngs_pipeline_api-0.1.6.tar.gz#sha256=486eee7c3b727941787aeffaeed36c28cdde5c0eec271834b822e322a59498e8 2020-12-01T10:06:44,269 Removed cidc-ngs-pipeline-api==0.1.6 from https://files.pythonhosted.org/packages/9b/0e/35c8e8177092fc1576ae22518fdc5d10388800441a58c277fe9c9b132bbc/cidc_ngs_pipeline_api-0.1.6.tar.gz#sha256=486eee7c3b727941787aeffaeed36c28cdde5c0eec271834b822e322a59498e8 from build tracker '/tmp/pip-req-tracker-x5s56jxg' 2020-12-01T10:06:44,272 Building wheels for collected packages: cidc-ngs-pipeline-api 2020-12-01T10:06:44,277 Created temporary directory: /tmp/pip-wheel-8oj45b9j 2020-12-01T10:06:44,277 Building wheel for cidc-ngs-pipeline-api (setup.py): started 2020-12-01T10:06:44,278 Destination directory: /tmp/pip-wheel-8oj45b9j 2020-12-01T10:06:44,278 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-_kwdxvq2/cidc-ngs-pipeline-api/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-_kwdxvq2/cidc-ngs-pipeline-api/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8oj45b9j 2020-12-01T10:06:45,176 running bdist_wheel 2020-12-01T10:06:45,182 running build 2020-12-01T10:06:45,183 running build_py 2020-12-01T10:06:45,317 creating build 2020-12-01T10:06:45,317 creating build/lib 2020-12-01T10:06:45,318 creating build/lib/cidc_ngs_pipeline_api 2020-12-01T10:06:45,320 copying cidc_ngs_pipeline_api/__init__.py -> build/lib/cidc_ngs_pipeline_api 2020-12-01T10:06:45,322 running egg_info 2020-12-01T10:06:45,335 writing cidc_ngs_pipeline_api.egg-info/PKG-INFO 2020-12-01T10:06:45,337 writing dependency_links to cidc_ngs_pipeline_api.egg-info/dependency_links.txt 2020-12-01T10:06:45,339 writing requirements to cidc_ngs_pipeline_api.egg-info/requires.txt 2020-12-01T10:06:45,341 writing top-level names to cidc_ngs_pipeline_api.egg-info/top_level.txt 2020-12-01T10:06:45,346 reading manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-12-01T10:06:45,348 reading manifest template 'MANIFEST.in' 2020-12-01T10:06:45,357 writing manifest file 'cidc_ngs_pipeline_api.egg-info/SOURCES.txt' 2020-12-01T10:06:45,360 copying cidc_ngs_pipeline_api/output_API.schema.json -> build/lib/cidc_ngs_pipeline_api 2020-12-01T10:06:45,363 creating build/lib/cidc_ngs_pipeline_api/__pycache__ 2020-12-01T10:06:45,364 copying cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/lib/cidc_ngs_pipeline_api/__pycache__ 2020-12-01T10:06:45,366 creating build/lib/cidc_ngs_pipeline_api/chips 2020-12-01T10:06:45,367 copying cidc_ngs_pipeline_api/chips/chips.md -> build/lib/cidc_ngs_pipeline_api/chips 2020-12-01T10:06:45,370 copying cidc_ngs_pipeline_api/chips/chips_output_API.json -> build/lib/cidc_ngs_pipeline_api/chips 2020-12-01T10:06:45,373 creating build/lib/cidc_ngs_pipeline_api/chips/imgs 2020-12-01T10:06:45,374 copying cidc_ngs_pipeline_api/chips/imgs/chips.png -> build/lib/cidc_ngs_pipeline_api/chips/imgs 2020-12-01T10:06:45,394 creating build/lib/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,395 copying cidc_ngs_pipeline_api/rna/rna.md -> build/lib/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,398 copying cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/lib/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,400 copying cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/lib/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,403 creating build/lib/cidc_ngs_pipeline_api/rna/imgs 2020-12-01T10:06:45,404 copying cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/lib/cidc_ngs_pipeline_api/rna/imgs 2020-12-01T10:06:45,452 creating build/lib/cidc_ngs_pipeline_api/tcr 2020-12-01T10:06:45,453 copying cidc_ngs_pipeline_api/tcr/tcr.md -> build/lib/cidc_ngs_pipeline_api/tcr 2020-12-01T10:06:45,456 creating build/lib/cidc_ngs_pipeline_api/tcr/imgs 2020-12-01T10:06:45,456 copying cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/lib/cidc_ngs_pipeline_api/tcr/imgs 2020-12-01T10:06:45,464 creating build/lib/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,465 copying cidc_ngs_pipeline_api/wes/wes.md -> build/lib/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,468 copying cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/lib/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,470 copying cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/lib/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,473 copying cidc_ngs_pipeline_api/wes/wes_output_API.py -> build/lib/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,476 creating build/lib/cidc_ngs_pipeline_api/wes/imgs 2020-12-01T10:06:45,477 copying cidc_ngs_pipeline_api/wes/imgs/wes.png -> build/lib/cidc_ngs_pipeline_api/wes/imgs 2020-12-01T10:06:45,498 installing to build/bdist.linux-armv7l/wheel 2020-12-01T10:06:45,498 running install 2020-12-01T10:06:45,499 running install_lib 2020-12-01T10:06:45,502 creating build/bdist.linux-armv7l 2020-12-01T10:06:45,503 creating build/bdist.linux-armv7l/wheel 2020-12-01T10:06:45,505 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api 2020-12-01T10:06:45,506 copying build/lib/cidc_ngs_pipeline_api/__init__.py -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api 2020-12-01T10:06:45,508 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr 2020-12-01T10:06:45,509 copying build/lib/cidc_ngs_pipeline_api/tcr/tcr.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr 2020-12-01T10:06:45,512 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs 2020-12-01T10:06:45,513 copying build/lib/cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/tcr/imgs 2020-12-01T10:06:45,521 copying build/lib/cidc_ngs_pipeline_api/output_API.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api 2020-12-01T10:06:45,523 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips 2020-12-01T10:06:45,524 copying build/lib/cidc_ngs_pipeline_api/chips/chips.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips 2020-12-01T10:06:45,527 copying build/lib/cidc_ngs_pipeline_api/chips/chips_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips 2020-12-01T10:06:45,529 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips/imgs 2020-12-01T10:06:45,530 copying build/lib/cidc_ngs_pipeline_api/chips/imgs/chips.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/chips/imgs 2020-12-01T10:06:45,552 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,552 copying build/lib/cidc_ngs_pipeline_api/wes/wes_output_API.py -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,555 copying build/lib/cidc_ngs_pipeline_api/wes/wes.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,557 copying build/lib/cidc_ngs_pipeline_api/wes/wes_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,560 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes/imgs 2020-12-01T10:06:45,561 copying build/lib/cidc_ngs_pipeline_api/wes/imgs/wes.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes/imgs 2020-12-01T10:06:45,575 copying build/lib/cidc_ngs_pipeline_api/wes/wes_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/wes 2020-12-01T10:06:45,580 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,580 copying build/lib/cidc_ngs_pipeline_api/rna/rna.md -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,583 copying build/lib/cidc_ngs_pipeline_api/rna/rna_output_API.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,585 copying build/lib/cidc_ngs_pipeline_api/rna/rna_config.schema.json -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna 2020-12-01T10:06:45,588 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs 2020-12-01T10:06:45,589 copying build/lib/cidc_ngs_pipeline_api/rna/imgs/RIMA.png -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/rna/imgs 2020-12-01T10:06:45,624 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__ 2020-12-01T10:06:45,625 copying build/lib/cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc -> build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api/__pycache__ 2020-12-01T10:06:45,627 running install_egg_info 2020-12-01T10:06:45,634 Copying cidc_ngs_pipeline_api.egg-info to build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.6-py3.7.egg-info 2020-12-01T10:06:45,648 running install_scripts 2020-12-01T10:06:45,725 creating build/bdist.linux-armv7l/wheel/cidc_ngs_pipeline_api-0.1.6.dist-info/WHEEL 2020-12-01T10:06:45,728 creating '/tmp/pip-wheel-8oj45b9j/cidc_ngs_pipeline_api-0.1.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-12-01T10:06:45,731 adding 'cidc_ngs_pipeline_api/__init__.py' 2020-12-01T10:06:45,732 adding 'cidc_ngs_pipeline_api/output_API.schema.json' 2020-12-01T10:06:45,734 adding 'cidc_ngs_pipeline_api/__pycache__/__init__.cpython-37.pyc' 2020-12-01T10:06:45,736 adding 'cidc_ngs_pipeline_api/chips/chips.md' 2020-12-01T10:06:45,738 adding 'cidc_ngs_pipeline_api/chips/chips_output_API.json' 2020-12-01T10:06:45,827 adding 'cidc_ngs_pipeline_api/chips/imgs/chips.png' 2020-12-01T10:06:45,833 adding 'cidc_ngs_pipeline_api/rna/rna.md' 2020-12-01T10:06:45,834 adding 'cidc_ngs_pipeline_api/rna/rna_config.schema.json' 2020-12-01T10:06:45,836 adding 'cidc_ngs_pipeline_api/rna/rna_output_API.json' 2020-12-01T10:06:45,972 adding 'cidc_ngs_pipeline_api/rna/imgs/RIMA.png' 2020-12-01T10:06:45,981 adding 'cidc_ngs_pipeline_api/tcr/tcr.md' 2020-12-01T10:06:46,001 adding 'cidc_ngs_pipeline_api/tcr/imgs/TCRseq.png' 2020-12-01T10:06:46,004 adding 'cidc_ngs_pipeline_api/wes/wes.md' 2020-12-01T10:06:46,005 adding 'cidc_ngs_pipeline_api/wes/wes_config.schema.json' 2020-12-01T10:06:46,007 adding 'cidc_ngs_pipeline_api/wes/wes_output_API.json' 2020-12-01T10:06:46,009 adding 'cidc_ngs_pipeline_api/wes/wes_output_API.py' 2020-12-01T10:06:46,062 adding 'cidc_ngs_pipeline_api/wes/imgs/wes.png' 2020-12-01T10:06:46,066 adding 'cidc_ngs_pipeline_api-0.1.6.dist-info/METADATA' 2020-12-01T10:06:46,067 adding 'cidc_ngs_pipeline_api-0.1.6.dist-info/WHEEL' 2020-12-01T10:06:46,068 adding 'cidc_ngs_pipeline_api-0.1.6.dist-info/top_level.txt' 2020-12-01T10:06:46,069 adding 'cidc_ngs_pipeline_api-0.1.6.dist-info/RECORD' 2020-12-01T10:06:46,101 removing build/bdist.linux-armv7l/wheel 2020-12-01T10:06:46,185 Building wheel for cidc-ngs-pipeline-api (setup.py): finished with status 'done' 2020-12-01T10:06:46,212 Created wheel for cidc-ngs-pipeline-api: filename=cidc_ngs_pipeline_api-0.1.6-py3-none-any.whl size=2333530 sha256=ffa8560a756d968034cd35ae15299e3ac31bc0b3f0179dc50f23e7fd7d963a4f 2020-12-01T10:06:46,213 Stored in directory: /tmp/pip-ephem-wheel-cache-qrqbd38n/wheels/58/ca/16/91ea2c41b334b0d5d94b00e43a7e11d6f278ae9e9b5e435134 2020-12-01T10:06:46,215 Successfully built cidc-ngs-pipeline-api 2020-12-01T10:06:46,286 Removed build tracker: '/tmp/pip-req-tracker-x5s56jxg'