2020-12-01T13:25:00,788 Created temporary directory: /tmp/pip-ephem-wheel-cache-8vl28bm0 2020-12-01T13:25:00,791 Created temporary directory: /tmp/pip-req-tracker-1bfo9kqg 2020-12-01T13:25:00,792 Initialized build tracking at /tmp/pip-req-tracker-1bfo9kqg 2020-12-01T13:25:00,792 Created build tracker: /tmp/pip-req-tracker-1bfo9kqg 2020-12-01T13:25:00,792 Entered build tracker: /tmp/pip-req-tracker-1bfo9kqg 2020-12-01T13:25:00,794 Created temporary directory: /tmp/pip-wheel-kaio9kfn 2020-12-01T13:25:00,806 1 location(s) to search for versions of sequana-pacbio-qc: 2020-12-01T13:25:00,806 * https://pypi.org/simple/sequana-pacbio-qc/ 2020-12-01T13:25:00,806 Fetching project page and analyzing links: https://pypi.org/simple/sequana-pacbio-qc/ 2020-12-01T13:25:00,807 Getting page https://pypi.org/simple/sequana-pacbio-qc/ 2020-12-01T13:25:00,809 Found index url https://pypi.org/simple 2020-12-01T13:25:00,900 Found link https://files.pythonhosted.org/packages/69/a4/21cd9f8edb0c96b180d6bb078baba01dcd8a1eb5ec6b8e17156092f51b05/sequana_pacbio_qc-0.9.0.tar.gz#sha256=edadb3fe844371c9f06595b9efb2cfce2995ad64fbc3155cffd6d38272df551f (from https://pypi.org/simple/sequana-pacbio-qc/), version: 0.9.0 2020-12-01T13:25:00,904 Given no hashes to check 1 links for project 'sequana-pacbio-qc': discarding no candidates 2020-12-01T13:25:00,905 Using version 0.9.0 (newest of versions: 0.9.0) 2020-12-01T13:25:00,909 Collecting sequana-pacbio-qc==0.9.0 2020-12-01T13:25:00,910 Created temporary directory: /tmp/pip-unpack-ub36_9z8 2020-12-01T13:25:00,953 Downloading sequana_pacbio_qc-0.9.0.tar.gz (1.3 MB) 2020-12-01T13:25:01,456 Added sequana-pacbio-qc==0.9.0 from https://files.pythonhosted.org/packages/69/a4/21cd9f8edb0c96b180d6bb078baba01dcd8a1eb5ec6b8e17156092f51b05/sequana_pacbio_qc-0.9.0.tar.gz#sha256=edadb3fe844371c9f06595b9efb2cfce2995ad64fbc3155cffd6d38272df551f to build tracker '/tmp/pip-req-tracker-1bfo9kqg' 2020-12-01T13:25:01,458 Running setup.py (path:/tmp/pip-wheel-kaio9kfn/sequana-pacbio-qc/setup.py) egg_info for package sequana-pacbio-qc 2020-12-01T13:25:01,460 Created temporary directory: /tmp/pip-pip-egg-info-q97xgos1 2020-12-01T13:25:01,460 Running command python setup.py egg_info 2020-12-01T13:25:02,407 running egg_info 2020-12-01T13:25:02,410 creating /tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info 2020-12-01T13:25:02,411 writing /tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/PKG-INFO 2020-12-01T13:25:02,414 writing dependency_links to /tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/dependency_links.txt 2020-12-01T13:25:02,416 writing entry points to /tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/entry_points.txt 2020-12-01T13:25:02,417 writing requirements to /tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/requires.txt 2020-12-01T13:25:02,418 writing top-level names to /tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/top_level.txt 2020-12-01T13:25:02,420 writing manifest file '/tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/SOURCES.txt' 2020-12-01T13:25:02,571 reading manifest file '/tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/SOURCES.txt' 2020-12-01T13:25:02,575 writing manifest file '/tmp/pip-pip-egg-info-q97xgos1/sequana_pacbio_qc.egg-info/SOURCES.txt' 2020-12-01T13:25:02,639 Source in /tmp/pip-wheel-kaio9kfn/sequana-pacbio-qc has version 0.9.0, which satisfies requirement sequana-pacbio-qc==0.9.0 from https://files.pythonhosted.org/packages/69/a4/21cd9f8edb0c96b180d6bb078baba01dcd8a1eb5ec6b8e17156092f51b05/sequana_pacbio_qc-0.9.0.tar.gz#sha256=edadb3fe844371c9f06595b9efb2cfce2995ad64fbc3155cffd6d38272df551f 2020-12-01T13:25:02,640 Removed sequana-pacbio-qc==0.9.0 from https://files.pythonhosted.org/packages/69/a4/21cd9f8edb0c96b180d6bb078baba01dcd8a1eb5ec6b8e17156092f51b05/sequana_pacbio_qc-0.9.0.tar.gz#sha256=edadb3fe844371c9f06595b9efb2cfce2995ad64fbc3155cffd6d38272df551f from build tracker '/tmp/pip-req-tracker-1bfo9kqg' 2020-12-01T13:25:02,642 Building wheels for collected packages: sequana-pacbio-qc 2020-12-01T13:25:02,647 Created temporary directory: /tmp/pip-wheel-s1_6tiku 2020-12-01T13:25:02,647 Building wheel for sequana-pacbio-qc (setup.py): started 2020-12-01T13:25:02,648 Destination directory: /tmp/pip-wheel-s1_6tiku 2020-12-01T13:25:02,648 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-kaio9kfn/sequana-pacbio-qc/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-kaio9kfn/sequana-pacbio-qc/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-s1_6tiku 2020-12-01T13:25:03,684 running bdist_wheel 2020-12-01T13:25:03,691 running build 2020-12-01T13:25:03,691 running build_py 2020-12-01T13:25:03,825 creating build 2020-12-01T13:25:03,825 creating build/lib 2020-12-01T13:25:03,826 creating build/lib/sequana_pipelines 2020-12-01T13:25:03,827 creating build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,828 copying sequana_pipelines/pacbio_qc/__init__.py -> build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,830 copying sequana_pipelines/pacbio_qc/main.py -> build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,833 creating build/lib/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,834 copying sequana_pipelines/pacbio_qc/data/__init__.py -> build/lib/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,842 copying sequana_pipelines/pacbio_qc/config.yaml -> build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,845 copying sequana_pipelines/pacbio_qc/multiqc_config.yaml -> build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,849 copying sequana_pipelines/pacbio_qc/schema.yaml -> build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,851 copying sequana_pipelines/pacbio_qc/pacbio_qc.rules -> build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,855 copying sequana_pipelines/pacbio_qc/requirements.txt -> build/lib/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,858 copying sequana_pipelines/pacbio_qc/data/lima_output.lbc32--lbc32.ccs.bam -> build/lib/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,872 copying sequana_pipelines/pacbio_qc/data/lima_output.lbc43--lbc43.ccs.bam -> build/lib/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,904 installing to build/bdist.linux-armv7l/wheel 2020-12-01T13:25:03,904 running install 2020-12-01T13:25:03,905 running install_lib 2020-12-01T13:25:03,909 creating build/bdist.linux-armv7l 2020-12-01T13:25:03,909 creating build/bdist.linux-armv7l/wheel 2020-12-01T13:25:03,911 creating build/bdist.linux-armv7l/wheel/sequana_pipelines 2020-12-01T13:25:03,913 creating build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,914 copying build/lib/sequana_pipelines/pacbio_qc/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,916 copying build/lib/sequana_pipelines/pacbio_qc/pacbio_qc.rules -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,919 creating build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,920 copying build/lib/sequana_pipelines/pacbio_qc/data/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,923 copying build/lib/sequana_pipelines/pacbio_qc/data/lima_output.lbc32--lbc32.ccs.bam -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,937 copying build/lib/sequana_pipelines/pacbio_qc/data/lima_output.lbc43--lbc43.ccs.bam -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc/data 2020-12-01T13:25:03,968 copying build/lib/sequana_pipelines/pacbio_qc/config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,970 copying build/lib/sequana_pipelines/pacbio_qc/requirements.txt -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,972 copying build/lib/sequana_pipelines/pacbio_qc/multiqc_config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,974 copying build/lib/sequana_pipelines/pacbio_qc/schema.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,977 copying build/lib/sequana_pipelines/pacbio_qc/main.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/pacbio_qc 2020-12-01T13:25:03,979 running install_egg_info 2020-12-01T13:25:04,004 running egg_info 2020-12-01T13:25:04,004 writing sequana_pacbio_qc.egg-info/PKG-INFO 2020-12-01T13:25:04,007 writing dependency_links to sequana_pacbio_qc.egg-info/dependency_links.txt 2020-12-01T13:25:04,008 writing entry points to sequana_pacbio_qc.egg-info/entry_points.txt 2020-12-01T13:25:04,009 writing requirements to sequana_pacbio_qc.egg-info/requires.txt 2020-12-01T13:25:04,011 writing top-level names to sequana_pacbio_qc.egg-info/top_level.txt 2020-12-01T13:25:04,015 reading manifest file 'sequana_pacbio_qc.egg-info/SOURCES.txt' 2020-12-01T13:25:04,020 writing manifest file 'sequana_pacbio_qc.egg-info/SOURCES.txt' 2020-12-01T13:25:04,022 Copying sequana_pacbio_qc.egg-info to build/bdist.linux-armv7l/wheel/sequana_pacbio_qc-0.9.0-py3.7.egg-info 2020-12-01T13:25:04,039 running install_scripts 2020-12-01T13:25:04,126 creating build/bdist.linux-armv7l/wheel/sequana_pacbio_qc-0.9.0.dist-info/WHEEL 2020-12-01T13:25:04,128 creating '/tmp/pip-wheel-s1_6tiku/sequana_pacbio_qc-0.9.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-12-01T13:25:04,133 adding 'sequana_pipelines/pacbio_qc/__init__.py' 2020-12-01T13:25:04,135 adding 'sequana_pipelines/pacbio_qc/config.yaml' 2020-12-01T13:25:04,136 adding 'sequana_pipelines/pacbio_qc/main.py' 2020-12-01T13:25:04,138 adding 'sequana_pipelines/pacbio_qc/multiqc_config.yaml' 2020-12-01T13:25:04,141 adding 'sequana_pipelines/pacbio_qc/pacbio_qc.rules' 2020-12-01T13:25:04,142 adding 'sequana_pipelines/pacbio_qc/requirements.txt' 2020-12-01T13:25:04,143 adding 'sequana_pipelines/pacbio_qc/schema.yaml' 2020-12-01T13:25:04,146 adding 'sequana_pipelines/pacbio_qc/data/__init__.py' 2020-12-01T13:25:04,192 adding 'sequana_pipelines/pacbio_qc/data/lima_output.lbc32--lbc32.ccs.bam' 2020-12-01T13:25:04,306 adding 'sequana_pipelines/pacbio_qc/data/lima_output.lbc43--lbc43.ccs.bam' 2020-12-01T13:25:04,314 adding 'sequana_pacbio_qc-0.9.0.dist-info/METADATA' 2020-12-01T13:25:04,315 adding 'sequana_pacbio_qc-0.9.0.dist-info/WHEEL' 2020-12-01T13:25:04,316 adding 'sequana_pacbio_qc-0.9.0.dist-info/entry_points.txt' 2020-12-01T13:25:04,316 adding 'sequana_pacbio_qc-0.9.0.dist-info/top_level.txt' 2020-12-01T13:25:04,317 adding 'sequana_pacbio_qc-0.9.0.dist-info/RECORD' 2020-12-01T13:25:04,337 removing build/bdist.linux-armv7l/wheel 2020-12-01T13:25:04,417 Building wheel for sequana-pacbio-qc (setup.py): finished with status 'done' 2020-12-01T13:25:04,435 Created wheel for sequana-pacbio-qc: filename=sequana_pacbio_qc-0.9.0-py3-none-any.whl size=1322661 sha256=a0a02bdc1951bac94df4799610d147ada2096f05d9eecb93bc8f385033ed711d 2020-12-01T13:25:04,436 Stored in directory: /tmp/pip-ephem-wheel-cache-8vl28bm0/wheels/2e/dd/c4/9bebce2715f5ab0107ff27ef3c5f7fb80734958f66ccb20dba 2020-12-01T13:25:04,438 Successfully built sequana-pacbio-qc 2020-12-01T13:25:04,489 Removed build tracker: '/tmp/pip-req-tracker-1bfo9kqg'