2020-12-01T16:19:00,642 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-12-01T16:19:01,367 Created temporary directory: /tmp/pip-ephem-wheel-cache-eqpf50ex
2020-12-01T16:19:01,372 Created temporary directory: /tmp/pip-req-tracker-7smwosng
2020-12-01T16:19:01,373 Initialized build tracking at /tmp/pip-req-tracker-7smwosng
2020-12-01T16:19:01,374 Created build tracker: /tmp/pip-req-tracker-7smwosng
2020-12-01T16:19:01,375 Entered build tracker: /tmp/pip-req-tracker-7smwosng
2020-12-01T16:19:01,377 Created temporary directory: /tmp/pip-wheel-b_uoc5ez
2020-12-01T16:19:01,401 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-12-01T16:19:01,405 2 location(s) to search for versions of rcsb-utils-io:
2020-12-01T16:19:01,405 * https://pypi.org/simple/rcsb-utils-io/
2020-12-01T16:19:01,405 * https://pypi.ngc.nvidia.com/rcsb-utils-io/
2020-12-01T16:19:01,405 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-io/
2020-12-01T16:19:01,408 Getting page https://pypi.org/simple/rcsb-utils-io/
2020-12-01T16:19:01,413 Found index url https://pypi.org/simple
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2020-12-01T16:19:01,971   Found link https://files.pythonhosted.org/packages/7d/0f/4a917183cb333a533042df7fdd7c564a9db67ba466361f6b377a6627ea17/rcsb.utils.io-0.10.tar.gz#sha256=e6969d92c65117ee6e8396c66ee3f5659b57b84554d2d0ebdf955500f6d77a03 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.10
2020-12-01T16:19:01,973   Found link https://files.pythonhosted.org/packages/c3/f6/a7e27e913a25c79dedde77b56939678e6a8fcca70a789844238fa519646f/rcsb.utils.io-0.11-py2.py3-none-any.whl#sha256=120f5cba043e3f43b26609c34c46fbbe8fc40dc11b82bd309d43d4606bff4563 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.11
2020-12-01T16:19:01,974   Found link https://files.pythonhosted.org/packages/10/99/776816e93f41efc82b0fa0138834d866f3039d4098cf87e2ae41fb04c471/rcsb.utils.io-0.11.tar.gz#sha256=bdd160455ba0352ffac5e18e560a6d07c8726e0ef421771b93e057e299657290 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.11
2020-12-01T16:19:01,975   Found link https://files.pythonhosted.org/packages/b0/83/bffd162dedf9f928abd3d37a9db636c53f9690128c511f066727c33dfb8f/rcsb.utils.io-0.12-py2.py3-none-any.whl#sha256=3fbddb3c48fc7b6f71601f2ad5284da074d186ce872fd4896c8c48044486a977 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.12
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2020-12-01T16:19:01,977   Found link https://files.pythonhosted.org/packages/d8/4b/d1fe917336f2fd51c3c484fea9d34cd7fe27af2e407fb1cd3e5f4c21da46/rcsb.utils.io-0.13-py2.py3-none-any.whl#sha256=bde0e40bd1e1f836691aec7d25081d364ff01a77bd0446a82af4f4671ddea455 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.13
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2020-12-01T16:19:01,979   Found link https://files.pythonhosted.org/packages/d6/6b/91c6d871e6045c7588db347dfe689ad7e77498ea370817a21ee1c1cc9506/rcsb.utils.io-0.14-py2.py3-none-any.whl#sha256=8117c440a15816147170d08c2e64d5e7628c4b4f4e7083e14ed8296ef5f2b350 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.14
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2020-12-01T16:19:02,130   Found link https://files.pythonhosted.org/packages/2c/27/8eb9d8aec41716822a708ae1e713905fedfaea1ae58c5e3635c60e719aec/rcsb.utils.io-0.84-py2.py3-none-any.whl#sha256=219610f05713e5b7f3abd17757a7947dc8dab92bbcd44e20f25505dd8c7c28a7 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.84
2020-12-01T16:19:02,131   Found link https://files.pythonhosted.org/packages/5c/45/33be2731d7e32dda6e43bb3c30b8663b0cab75f7c6d887f78305a6bbbc31/rcsb.utils.io-0.84.tar.gz#sha256=01a91f5c2c53f2eb03349c15b970e55c7ef59289ae7b21c04ff4bc9cfdfacb7f (from https://pypi.org/simple/rcsb-utils-io/), version: 0.84
2020-12-01T16:19:02,132   Found link https://files.pythonhosted.org/packages/be/d5/ef96a6daac0922a71ba8bba2ceaa80f3c31dddf2edee2bed6c0dbfb4d4b3/rcsb.utils.io-0.85.tar.gz#sha256=340ae463fe301b5fb441ab7d20590d205785cb85dd7fa7062c041400d41a7785 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.85
2020-12-01T16:19:02,133   Found link https://files.pythonhosted.org/packages/66/88/491404d1520c2f43b0b63cd4ae4f80893ce809ecfe1f492be44fed4d5bce/rcsb.utils.io-0.86.tar.gz#sha256=cfc6124828c0d30ceb133f6c55d6a82dee9046c92fea699f891d3809fbcbf98b (from https://pypi.org/simple/rcsb-utils-io/), version: 0.86
2020-12-01T16:19:02,134 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-io/
2020-12-01T16:19:02,135 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-io/
2020-12-01T16:19:02,138 Found index url https://pypi.ngc.nvidia.com
2020-12-01T16:19:03,167 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-io/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-io/ - skipping
2020-12-01T16:19:03,247 Given no hashes to check 1 links for project 'rcsb-utils-io': discarding no candidates
2020-12-01T16:19:03,252 Using version 0.86 (newest of versions: 0.86)
2020-12-01T16:19:03,262 Collecting rcsb-utils-io==0.86
2020-12-01T16:19:03,267   Created temporary directory: /tmp/pip-unpack-60_0a37z
2020-12-01T16:19:03,496   Downloading rcsb.utils.io-0.86.tar.gz (28 kB)
2020-12-01T16:19:03,717   Added rcsb-utils-io==0.86 from https://files.pythonhosted.org/packages/66/88/491404d1520c2f43b0b63cd4ae4f80893ce809ecfe1f492be44fed4d5bce/rcsb.utils.io-0.86.tar.gz#sha256=cfc6124828c0d30ceb133f6c55d6a82dee9046c92fea699f891d3809fbcbf98b to build tracker '/tmp/pip-req-tracker-7smwosng'
2020-12-01T16:19:03,720     Running setup.py (path:/tmp/pip-wheel-b_uoc5ez/rcsb-utils-io/setup.py) egg_info for package rcsb-utils-io
2020-12-01T16:19:03,722     Created temporary directory: /tmp/pip-pip-egg-info-2z2rxgez
2020-12-01T16:19:03,723     Running command python setup.py egg_info
2020-12-01T16:19:06,071     running egg_info
2020-12-01T16:19:06,077     creating /tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info
2020-12-01T16:19:06,081     writing requirements to /tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/requires.txt
2020-12-01T16:19:06,083     writing dependency_links to /tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/dependency_links.txt
2020-12-01T16:19:06,086     writing /tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/PKG-INFO
2020-12-01T16:19:06,092     writing entry points to /tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/entry_points.txt
2020-12-01T16:19:06,094     writing top-level names to /tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/top_level.txt
2020-12-01T16:19:06,099     writing manifest file '/tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/SOURCES.txt'
2020-12-01T16:19:06,468     reading manifest file '/tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/SOURCES.txt'
2020-12-01T16:19:06,471     reading manifest template 'MANIFEST.in'
2020-12-01T16:19:06,479     writing manifest file '/tmp/pip-pip-egg-info-2z2rxgez/rcsb.utils.io.egg-info/SOURCES.txt'
2020-12-01T16:19:06,614   Source in /tmp/pip-wheel-b_uoc5ez/rcsb-utils-io has version 0.86, which satisfies requirement rcsb-utils-io==0.86 from https://files.pythonhosted.org/packages/66/88/491404d1520c2f43b0b63cd4ae4f80893ce809ecfe1f492be44fed4d5bce/rcsb.utils.io-0.86.tar.gz#sha256=cfc6124828c0d30ceb133f6c55d6a82dee9046c92fea699f891d3809fbcbf98b
2020-12-01T16:19:06,616   Removed rcsb-utils-io==0.86 from https://files.pythonhosted.org/packages/66/88/491404d1520c2f43b0b63cd4ae4f80893ce809ecfe1f492be44fed4d5bce/rcsb.utils.io-0.86.tar.gz#sha256=cfc6124828c0d30ceb133f6c55d6a82dee9046c92fea699f891d3809fbcbf98b from build tracker '/tmp/pip-req-tracker-7smwosng'
2020-12-01T16:19:06,620 Building wheels for collected packages: rcsb-utils-io
2020-12-01T16:19:06,629   Created temporary directory: /tmp/pip-wheel-0xbkn3f1
2020-12-01T16:19:06,630   Building wheel for rcsb-utils-io (setup.py): started
2020-12-01T16:19:06,631   Destination directory: /tmp/pip-wheel-0xbkn3f1
2020-12-01T16:19:06,631   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-b_uoc5ez/rcsb-utils-io/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-b_uoc5ez/rcsb-utils-io/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-0xbkn3f1
2020-12-01T16:19:08,974   running bdist_wheel
2020-12-01T16:19:08,989   running build
2020-12-01T16:19:08,990   running build_py
2020-12-01T16:19:09,329   creating build
2020-12-01T16:19:09,330   creating build/lib
2020-12-01T16:19:09,331   creating build/lib/rcsb
2020-12-01T16:19:09,334   copying rcsb/__init__.py -> build/lib/rcsb
2020-12-01T16:19:09,339   creating build/lib/rcsb/utils
2020-12-01T16:19:09,341   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-12-01T16:19:09,349   creating build/lib/rcsb/utils/io
2020-12-01T16:19:09,352   copying rcsb/utils/io/SftpUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,361   copying rcsb/utils/io/CacheUtils.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,366   copying rcsb/utils/io/UrlRequestUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,373   copying rcsb/utils/io/IoUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,380   copying rcsb/utils/io/FastaUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,386   copying rcsb/utils/io/ProcessStatusUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,393   copying rcsb/utils/io/ExecUtils.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,399   copying rcsb/utils/io/HashableDict.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,405   copying rcsb/utils/io/MarshalUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,412   copying rcsb/utils/io/FileUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,420   copying rcsb/utils/io/decorators.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,427   copying rcsb/utils/io/CryptUtils.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,433   copying rcsb/utils/io/__init__.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,438   copying rcsb/utils/io/SingletonClass.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,445   copying rcsb/utils/io/StashUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,452   copying rcsb/utils/io/TimeUtil.py -> build/lib/rcsb/utils/io
2020-12-01T16:19:09,482   installing to build/bdist.linux-armv7l/wheel
2020-12-01T16:19:09,483   running install
2020-12-01T16:19:09,485   running install_lib
2020-12-01T16:19:09,493   creating build/bdist.linux-armv7l
2020-12-01T16:19:09,494   creating build/bdist.linux-armv7l/wheel
2020-12-01T16:19:09,498   creating build/bdist.linux-armv7l/wheel/rcsb
2020-12-01T16:19:09,501   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-01T16:19:09,509   creating build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,511   copying build/lib/rcsb/utils/io/SftpUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,517   copying build/lib/rcsb/utils/io/CacheUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,521   copying build/lib/rcsb/utils/io/UrlRequestUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,527   copying build/lib/rcsb/utils/io/IoUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,535   copying build/lib/rcsb/utils/io/FastaUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,542   copying build/lib/rcsb/utils/io/ProcessStatusUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,549   copying build/lib/rcsb/utils/io/ExecUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,554   copying build/lib/rcsb/utils/io/HashableDict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,560   copying build/lib/rcsb/utils/io/MarshalUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,567   copying build/lib/rcsb/utils/io/FileUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,575   copying build/lib/rcsb/utils/io/decorators.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,582   copying build/lib/rcsb/utils/io/CryptUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,589   copying build/lib/rcsb/utils/io/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,594   copying build/lib/rcsb/utils/io/SingletonClass.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,600   copying build/lib/rcsb/utils/io/StashUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,607   copying build/lib/rcsb/utils/io/TimeUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2020-12-01T16:19:09,613   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-01T16:19:09,618   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-12-01T16:19:09,623   running install_egg_info
2020-12-01T16:19:09,670   running egg_info
2020-12-01T16:19:09,672   writing requirements to rcsb.utils.io.egg-info/requires.txt
2020-12-01T16:19:09,674   writing rcsb.utils.io.egg-info/PKG-INFO
2020-12-01T16:19:09,678   writing top-level names to rcsb.utils.io.egg-info/top_level.txt
2020-12-01T16:19:09,681   writing dependency_links to rcsb.utils.io.egg-info/dependency_links.txt
2020-12-01T16:19:09,684   writing entry points to rcsb.utils.io.egg-info/entry_points.txt
2020-12-01T16:19:09,697   reading manifest file 'rcsb.utils.io.egg-info/SOURCES.txt'
2020-12-01T16:19:09,702   reading manifest template 'MANIFEST.in'
2020-12-01T16:19:09,711   writing manifest file 'rcsb.utils.io.egg-info/SOURCES.txt'
2020-12-01T16:19:09,714   Copying rcsb.utils.io.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.io-0.86-py3.5.egg-info
2020-12-01T16:19:09,752   running install_scripts
2020-12-01T16:19:09,997   creating build/bdist.linux-armv7l/wheel/rcsb.utils.io-0.86.dist-info/WHEEL
2020-12-01T16:19:10,297   Building wheel for rcsb-utils-io (setup.py): finished with status 'done'
2020-12-01T16:19:10,302   Created wheel for rcsb-utils-io: filename=rcsb.utils.io-0.86-py2.py3-none-any.whl size=33039 sha256=cf57cd118407c06795eccff5bbb03faec3936fc96305d993ec17e5dcc35975fb
2020-12-01T16:19:10,303   Stored in directory: /tmp/pip-ephem-wheel-cache-eqpf50ex/wheels/b1/dc/0a/ca7c6b75aa63a86eabf3ef4c432bb4817949b5fac3c9c80abf
2020-12-01T16:19:10,307 Successfully built rcsb-utils-io
2020-12-01T16:19:10,320 Removed build tracker: '/tmp/pip-req-tracker-7smwosng'