2020-12-02T14:28:04,876 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-12-02T14:28:05,536 Created temporary directory: /tmp/pip-ephem-wheel-cache-s2hm0o8n
2020-12-02T14:28:05,540 Created temporary directory: /tmp/pip-req-tracker-sh93x_p0
2020-12-02T14:28:05,541 Initialized build tracking at /tmp/pip-req-tracker-sh93x_p0
2020-12-02T14:28:05,541 Created build tracker: /tmp/pip-req-tracker-sh93x_p0
2020-12-02T14:28:05,542 Entered build tracker: /tmp/pip-req-tracker-sh93x_p0
2020-12-02T14:28:05,543 Created temporary directory: /tmp/pip-wheel-ccr1n6e6
2020-12-02T14:28:05,558 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-12-02T14:28:05,561 2 location(s) to search for versions of rcsb-utils-chemref:
2020-12-02T14:28:05,561 * https://pypi.org/simple/rcsb-utils-chemref/
2020-12-02T14:28:05,561 * https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-12-02T14:28:05,562 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chemref/
2020-12-02T14:28:05,564 Getting page https://pypi.org/simple/rcsb-utils-chemref/
2020-12-02T14:28:05,567 Found index url https://pypi.org/simple
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2020-12-02T14:28:05,955   Found link https://files.pythonhosted.org/packages/ad/2c/7b8cca87ce5f2f2f767eda200e6bd5339ded78c08ffc45d7f18ca32209fb/rcsb.utils.chemref-0.11.tar.gz#sha256=bc259c7011908db093cf9e45a579000e2add93f2296a0179a54e5fe4871ae7f7 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.11
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2020-12-02T14:28:06,017   Found link https://files.pythonhosted.org/packages/8b/6c/442665e99d750e62bdf90e293ada2d303ec28740af7ffbe9f310b76ea1c1/rcsb.utils.chemref-0.48.tar.gz#sha256=49fca12e4ec80e38808e7c3bb01b7830bc5ac092c5fa8d2255ccf573c4900bc7 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.48
2020-12-02T14:28:06,018   Found link https://files.pythonhosted.org/packages/9f/08/9b57eaf838abb2e6a5b9fd76cc453fb27a1e9413510d8d60179f3694e5bb/rcsb.utils.chemref-0.49.tar.gz#sha256=3d8ab2b768c8e971df1f8347b4df61da33b6b426e7eb3fc6ff14597b00e3ed5f (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.49
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2020-12-02T14:28:06,020   Found link https://files.pythonhosted.org/packages/17/11/cf8ffe90faaaafe4e501ee4b8356d7f51d5709cf82b1e0a8040e41e65d85/rcsb.utils.chemref-0.52.tar.gz#sha256=1ba76cdad2f1f9e4edad37a3129aca6fffd2ae2987a86fe5da4f1299aaa16c04 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.52
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2020-12-02T14:28:06,022   Found link https://files.pythonhosted.org/packages/7c/96/37590c0c6dc44c3bd3af65a5025456102685cd0749bd6d72dbe00ef85805/rcsb.utils.chemref-0.54.tar.gz#sha256=a89646f628d195b0e587aaf16b5a90ec92bcd0f9153821c53cc2820a45621468 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.54
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2020-12-02T14:28:06,024   Found link https://files.pythonhosted.org/packages/fc/8b/5dea92d58b0a656b1a53caaf26af10f0aef8cbf1a9a0a12cda0839a33cbc/rcsb.utils.chemref-0.57.tar.gz#sha256=7449ecfb245b375b262c8021fd6050f001366515e05f6b4fcb750d590c70df65 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.57
2020-12-02T14:28:06,025   Found link https://files.pythonhosted.org/packages/92/24/fcf2b07bea96eea7d0dca6218e833f9f38661bef90d213c726e65d9884ef/rcsb.utils.chemref-0.58.tar.gz#sha256=0f08377d6adfcd6a61a69be2cf7451f6ec7e924b48979bf72f3d308d255b1ee4 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.58
2020-12-02T14:28:06,026   Found link https://files.pythonhosted.org/packages/14/38/5a9464f2ceed3640ca52191ef0e44b29779444a05d4eef179a2c08d9191f/rcsb.utils.chemref-0.59.tar.gz#sha256=535738d8afbd1db348bd27daeb8948e66b99387f06f7f235bb163bdc9f6ff715 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.59
2020-12-02T14:28:06,027   Found link https://files.pythonhosted.org/packages/17/0c/b94d7a3b1cd65899ca5d1db68c89cf6cdad2a011cb48851b56a2380d3ca9/rcsb.utils.chemref-0.60.tar.gz#sha256=106ec2765f4c7dc0cc4fdcd40e4332f4be0d04954320b5c8a092756d8b4955fd (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.60
2020-12-02T14:28:06,027   Found link https://files.pythonhosted.org/packages/79/dc/4405e013993be98fbc73ed0154d64d0f0352d74217d7859a55bbf8b34f1b/rcsb.utils.chemref-0.61.tar.gz#sha256=d0f253457befa52fc215293d767befe3f63c786349059053f64546244ac21e94 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.61
2020-12-02T14:28:06,028   Found link https://files.pythonhosted.org/packages/20/4c/44795187f0796bf67cf568e2c2a52ce3660803aa5b814303d1cb56ed47a3/rcsb.utils.chemref-0.62.tar.gz#sha256=5147e0a69f1c46b8bb378013eb9944932d209052f7f9209f7d9a45c12d9ad39c (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.62
2020-12-02T14:28:06,029 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-12-02T14:28:06,030 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-12-02T14:28:06,032 Found index url https://pypi.ngc.nvidia.com
2020-12-02T14:28:06,905 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-chemref/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-chemref/ - skipping
2020-12-02T14:28:06,949 Given no hashes to check 1 links for project 'rcsb-utils-chemref': discarding no candidates
2020-12-02T14:28:06,952 Using version 0.62 (newest of versions: 0.62)
2020-12-02T14:28:06,960 Collecting rcsb-utils-chemref==0.62
2020-12-02T14:28:06,964   Created temporary directory: /tmp/pip-unpack-nh6kq6oq
2020-12-02T14:28:07,183   Downloading rcsb.utils.chemref-0.62.tar.gz (33 kB)
2020-12-02T14:28:07,356   Added rcsb-utils-chemref==0.62 from https://files.pythonhosted.org/packages/20/4c/44795187f0796bf67cf568e2c2a52ce3660803aa5b814303d1cb56ed47a3/rcsb.utils.chemref-0.62.tar.gz#sha256=5147e0a69f1c46b8bb378013eb9944932d209052f7f9209f7d9a45c12d9ad39c to build tracker '/tmp/pip-req-tracker-sh93x_p0'
2020-12-02T14:28:07,358     Running setup.py (path:/tmp/pip-wheel-ccr1n6e6/rcsb-utils-chemref/setup.py) egg_info for package rcsb-utils-chemref
2020-12-02T14:28:07,359     Created temporary directory: /tmp/pip-pip-egg-info-w8ju5pcr
2020-12-02T14:28:07,360     Running command python setup.py egg_info
2020-12-02T14:28:09,596     running egg_info
2020-12-02T14:28:09,600     creating /tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info
2020-12-02T14:28:09,603     writing top-level names to /tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/top_level.txt
2020-12-02T14:28:09,605     writing entry points to /tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/entry_points.txt
2020-12-02T14:28:09,606     writing /tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/PKG-INFO
2020-12-02T14:28:09,611     writing requirements to /tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/requires.txt
2020-12-02T14:28:09,614     writing dependency_links to /tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/dependency_links.txt
2020-12-02T14:28:09,617     writing manifest file '/tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-02T14:28:09,929     reading manifest file '/tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-02T14:28:09,932     reading manifest template 'MANIFEST.in'
2020-12-02T14:28:09,939     writing manifest file '/tmp/pip-pip-egg-info-w8ju5pcr/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-02T14:28:10,068   Source in /tmp/pip-wheel-ccr1n6e6/rcsb-utils-chemref has version 0.62, which satisfies requirement rcsb-utils-chemref==0.62 from https://files.pythonhosted.org/packages/20/4c/44795187f0796bf67cf568e2c2a52ce3660803aa5b814303d1cb56ed47a3/rcsb.utils.chemref-0.62.tar.gz#sha256=5147e0a69f1c46b8bb378013eb9944932d209052f7f9209f7d9a45c12d9ad39c
2020-12-02T14:28:10,069   Removed rcsb-utils-chemref==0.62 from https://files.pythonhosted.org/packages/20/4c/44795187f0796bf67cf568e2c2a52ce3660803aa5b814303d1cb56ed47a3/rcsb.utils.chemref-0.62.tar.gz#sha256=5147e0a69f1c46b8bb378013eb9944932d209052f7f9209f7d9a45c12d9ad39c from build tracker '/tmp/pip-req-tracker-sh93x_p0'
2020-12-02T14:28:10,073 Building wheels for collected packages: rcsb-utils-chemref
2020-12-02T14:28:10,080   Created temporary directory: /tmp/pip-wheel-0kimkx0z
2020-12-02T14:28:10,080   Building wheel for rcsb-utils-chemref (setup.py): started
2020-12-02T14:28:10,081   Destination directory: /tmp/pip-wheel-0kimkx0z
2020-12-02T14:28:10,082   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ccr1n6e6/rcsb-utils-chemref/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ccr1n6e6/rcsb-utils-chemref/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-0kimkx0z
2020-12-02T14:28:12,178   running bdist_wheel
2020-12-02T14:28:12,193   running build
2020-12-02T14:28:12,194   running build_py
2020-12-02T14:28:12,483   creating build
2020-12-02T14:28:12,484   creating build/lib
2020-12-02T14:28:12,485   creating build/lib/rcsb
2020-12-02T14:28:12,486   copying rcsb/__init__.py -> build/lib/rcsb
2020-12-02T14:28:12,491   creating build/lib/rcsb/utils
2020-12-02T14:28:12,492   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-12-02T14:28:12,497   creating build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,499   copying rcsb/utils/chemref/PsiModProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,503   copying rcsb/utils/chemref/PharosProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,507   copying rcsb/utils/chemref/CARDProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,511   copying rcsb/utils/chemref/PubChemProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,516   copying rcsb/utils/chemref/ResidProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,521   copying rcsb/utils/chemref/__init__.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,526   copying rcsb/utils/chemref/ResidReader.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,531   copying rcsb/utils/chemref/PharosReadSqlDump.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,535   copying rcsb/utils/chemref/ChEMBLProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,539   copying rcsb/utils/chemref/AtcProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,543   copying rcsb/utils/chemref/DrugBankProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,548   copying rcsb/utils/chemref/DrugCentralProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,551   copying rcsb/utils/chemref/ChemCompModelProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,556   copying rcsb/utils/chemref/DrugBankReader.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,562   copying rcsb/utils/chemref/PubChemUtils.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,572   copying rcsb/utils/chemref/ChemCompProvider.py -> build/lib/rcsb/utils/chemref
2020-12-02T14:28:12,595   installing to build/bdist.linux-armv7l/wheel
2020-12-02T14:28:12,596   running install
2020-12-02T14:28:12,597   running install_lib
2020-12-02T14:28:12,605   creating build/bdist.linux-armv7l
2020-12-02T14:28:12,605   creating build/bdist.linux-armv7l/wheel
2020-12-02T14:28:12,608   creating build/bdist.linux-armv7l/wheel/rcsb
2020-12-02T14:28:12,610   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-12-02T14:28:12,614   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-02T14:28:12,615   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-02T14:28:12,620   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,621   copying build/lib/rcsb/utils/chemref/PsiModProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,626   copying build/lib/rcsb/utils/chemref/PharosProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,629   copying build/lib/rcsb/utils/chemref/CARDProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,633   copying build/lib/rcsb/utils/chemref/PubChemProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,636   copying build/lib/rcsb/utils/chemref/ResidProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,640   copying build/lib/rcsb/utils/chemref/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,643   copying build/lib/rcsb/utils/chemref/ResidReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,646   copying build/lib/rcsb/utils/chemref/PharosReadSqlDump.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,649   copying build/lib/rcsb/utils/chemref/ChEMBLProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,653   copying build/lib/rcsb/utils/chemref/AtcProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,657   copying build/lib/rcsb/utils/chemref/DrugBankProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,661   copying build/lib/rcsb/utils/chemref/DrugCentralProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,664   copying build/lib/rcsb/utils/chemref/ChemCompModelProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,668   copying build/lib/rcsb/utils/chemref/DrugBankReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,672   copying build/lib/rcsb/utils/chemref/PubChemUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,678   copying build/lib/rcsb/utils/chemref/ChemCompProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-02T14:28:12,681   running install_egg_info
2020-12-02T14:28:12,724   running egg_info
2020-12-02T14:28:12,726   writing requirements to rcsb.utils.chemref.egg-info/requires.txt
2020-12-02T14:28:12,728   writing dependency_links to rcsb.utils.chemref.egg-info/dependency_links.txt
2020-12-02T14:28:12,730   writing entry points to rcsb.utils.chemref.egg-info/entry_points.txt
2020-12-02T14:28:12,732   writing top-level names to rcsb.utils.chemref.egg-info/top_level.txt
2020-12-02T14:28:12,734   writing rcsb.utils.chemref.egg-info/PKG-INFO
2020-12-02T14:28:12,745   reading manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-02T14:28:12,749   reading manifest template 'MANIFEST.in'
2020-12-02T14:28:12,757   writing manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-02T14:28:12,760   Copying rcsb.utils.chemref.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.62-py3.5.egg-info
2020-12-02T14:28:12,784   running install_scripts
2020-12-02T14:28:12,952   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.62.dist-info/WHEEL
2020-12-02T14:28:13,201   Building wheel for rcsb-utils-chemref (setup.py): finished with status 'done'
2020-12-02T14:28:13,205   Created wheel for rcsb-utils-chemref: filename=rcsb.utils.chemref-0.62-py2.py3-none-any.whl size=42198 sha256=580894081ad4818e49573afb0c30900c2bda60ff9549cccaa150c5e5233b972b
2020-12-02T14:28:13,206   Stored in directory: /tmp/pip-ephem-wheel-cache-s2hm0o8n/wheels/21/19/47/434688009ef034de705678bb90576649608ae1ae98cd7fc2fb
2020-12-02T14:28:13,209 Successfully built rcsb-utils-chemref
2020-12-02T14:28:13,217 Removed build tracker: '/tmp/pip-req-tracker-sh93x_p0'