2020-12-05T16:23:31,486 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-12-05T16:23:32,146 Created temporary directory: /tmp/pip-ephem-wheel-cache-n0m4d5we
2020-12-05T16:23:32,150 Created temporary directory: /tmp/pip-req-tracker-jt25qayu
2020-12-05T16:23:32,150 Initialized build tracking at /tmp/pip-req-tracker-jt25qayu
2020-12-05T16:23:32,151 Created build tracker: /tmp/pip-req-tracker-jt25qayu
2020-12-05T16:23:32,151 Entered build tracker: /tmp/pip-req-tracker-jt25qayu
2020-12-05T16:23:32,152 Created temporary directory: /tmp/pip-wheel-98h8by4x
2020-12-05T16:23:32,168 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2020-12-05T16:23:32,171 2 location(s) to search for versions of rcsb-utils-chemref:
2020-12-05T16:23:32,171 * https://pypi.org/simple/rcsb-utils-chemref/
2020-12-05T16:23:32,171 * https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-12-05T16:23:32,171 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chemref/
2020-12-05T16:23:32,173 Getting page https://pypi.org/simple/rcsb-utils-chemref/
2020-12-05T16:23:32,177 Found index url https://pypi.org/simple
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2020-12-05T16:23:32,912   Found link https://files.pythonhosted.org/packages/17/0c/b94d7a3b1cd65899ca5d1db68c89cf6cdad2a011cb48851b56a2380d3ca9/rcsb.utils.chemref-0.60.tar.gz#sha256=106ec2765f4c7dc0cc4fdcd40e4332f4be0d04954320b5c8a092756d8b4955fd (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.60
2020-12-05T16:23:32,913   Found link https://files.pythonhosted.org/packages/79/dc/4405e013993be98fbc73ed0154d64d0f0352d74217d7859a55bbf8b34f1b/rcsb.utils.chemref-0.61.tar.gz#sha256=d0f253457befa52fc215293d767befe3f63c786349059053f64546244ac21e94 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.61
2020-12-05T16:23:32,914   Found link https://files.pythonhosted.org/packages/20/4c/44795187f0796bf67cf568e2c2a52ce3660803aa5b814303d1cb56ed47a3/rcsb.utils.chemref-0.62.tar.gz#sha256=5147e0a69f1c46b8bb378013eb9944932d209052f7f9209f7d9a45c12d9ad39c (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.62
2020-12-05T16:23:32,914   Found link https://files.pythonhosted.org/packages/0d/20/deb5cd32a1902d4d0105b066e067d2e3b3aa7977f22411ad224a167fa43f/rcsb.utils.chemref-0.63.tar.gz#sha256=c6d19d34ac9a20ff466d4f8d3d4354185f54c542ec7d791de9869d06d258ecd6 (from https://pypi.org/simple/rcsb-utils-chemref/), version: 0.63
2020-12-05T16:23:32,915 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-12-05T16:23:32,916 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-chemref/
2020-12-05T16:23:32,918 Found index url https://pypi.ngc.nvidia.com
2020-12-05T16:23:34,007 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-chemref/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-chemref/ - skipping
2020-12-05T16:23:34,049 Given no hashes to check 1 links for project 'rcsb-utils-chemref': discarding no candidates
2020-12-05T16:23:34,053 Using version 0.63 (newest of versions: 0.63)
2020-12-05T16:23:34,060 Collecting rcsb-utils-chemref==0.63
2020-12-05T16:23:34,065   Created temporary directory: /tmp/pip-unpack-_p47ixl_
2020-12-05T16:23:34,283   Downloading rcsb.utils.chemref-0.63.tar.gz (33 kB)
2020-12-05T16:23:34,451   Added rcsb-utils-chemref==0.63 from https://files.pythonhosted.org/packages/0d/20/deb5cd32a1902d4d0105b066e067d2e3b3aa7977f22411ad224a167fa43f/rcsb.utils.chemref-0.63.tar.gz#sha256=c6d19d34ac9a20ff466d4f8d3d4354185f54c542ec7d791de9869d06d258ecd6 to build tracker '/tmp/pip-req-tracker-jt25qayu'
2020-12-05T16:23:34,452     Running setup.py (path:/tmp/pip-wheel-98h8by4x/rcsb-utils-chemref/setup.py) egg_info for package rcsb-utils-chemref
2020-12-05T16:23:34,454     Created temporary directory: /tmp/pip-pip-egg-info-o5yt5z9q
2020-12-05T16:23:34,454     Running command python setup.py egg_info
2020-12-05T16:23:36,532     running egg_info
2020-12-05T16:23:36,537     creating /tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info
2020-12-05T16:23:36,539     writing dependency_links to /tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/dependency_links.txt
2020-12-05T16:23:36,541     writing entry points to /tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/entry_points.txt
2020-12-05T16:23:36,543     writing /tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/PKG-INFO
2020-12-05T16:23:36,547     writing requirements to /tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/requires.txt
2020-12-05T16:23:36,549     writing top-level names to /tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/top_level.txt
2020-12-05T16:23:36,553     writing manifest file '/tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-05T16:23:36,868     reading manifest file '/tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-05T16:23:36,870     reading manifest template 'MANIFEST.in'
2020-12-05T16:23:36,877     writing manifest file '/tmp/pip-pip-egg-info-o5yt5z9q/rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-05T16:23:37,004   Source in /tmp/pip-wheel-98h8by4x/rcsb-utils-chemref has version 0.63, which satisfies requirement rcsb-utils-chemref==0.63 from https://files.pythonhosted.org/packages/0d/20/deb5cd32a1902d4d0105b066e067d2e3b3aa7977f22411ad224a167fa43f/rcsb.utils.chemref-0.63.tar.gz#sha256=c6d19d34ac9a20ff466d4f8d3d4354185f54c542ec7d791de9869d06d258ecd6
2020-12-05T16:23:37,006   Removed rcsb-utils-chemref==0.63 from https://files.pythonhosted.org/packages/0d/20/deb5cd32a1902d4d0105b066e067d2e3b3aa7977f22411ad224a167fa43f/rcsb.utils.chemref-0.63.tar.gz#sha256=c6d19d34ac9a20ff466d4f8d3d4354185f54c542ec7d791de9869d06d258ecd6 from build tracker '/tmp/pip-req-tracker-jt25qayu'
2020-12-05T16:23:37,009 Building wheels for collected packages: rcsb-utils-chemref
2020-12-05T16:23:37,016   Created temporary directory: /tmp/pip-wheel-4js8tj5s
2020-12-05T16:23:37,017   Building wheel for rcsb-utils-chemref (setup.py): started
2020-12-05T16:23:37,018   Destination directory: /tmp/pip-wheel-4js8tj5s
2020-12-05T16:23:37,018   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-98h8by4x/rcsb-utils-chemref/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-98h8by4x/rcsb-utils-chemref/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-4js8tj5s
2020-12-05T16:23:39,128   running bdist_wheel
2020-12-05T16:23:39,143   running build
2020-12-05T16:23:39,144   running build_py
2020-12-05T16:23:39,432   creating build
2020-12-05T16:23:39,433   creating build/lib
2020-12-05T16:23:39,434   creating build/lib/rcsb
2020-12-05T16:23:39,436   copying rcsb/__init__.py -> build/lib/rcsb
2020-12-05T16:23:39,441   creating build/lib/rcsb/utils
2020-12-05T16:23:39,442   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-12-05T16:23:39,448   creating build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,449   copying rcsb/utils/chemref/PsiModProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,454   copying rcsb/utils/chemref/PharosProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,458   copying rcsb/utils/chemref/CARDProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,461   copying rcsb/utils/chemref/PubChemProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,465   copying rcsb/utils/chemref/ResidProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,469   copying rcsb/utils/chemref/__init__.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,845   copying rcsb/utils/chemref/ResidReader.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,850   copying rcsb/utils/chemref/PharosReadSqlDump.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,856   copying rcsb/utils/chemref/ChEMBLProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,862   copying rcsb/utils/chemref/AtcProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,866   copying rcsb/utils/chemref/DrugBankProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,870   copying rcsb/utils/chemref/DrugCentralProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,874   copying rcsb/utils/chemref/ChemCompModelProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,877   copying rcsb/utils/chemref/DrugBankReader.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,881   copying rcsb/utils/chemref/PubChemUtils.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,887   copying rcsb/utils/chemref/ChemCompProvider.py -> build/lib/rcsb/utils/chemref
2020-12-05T16:23:39,908   installing to build/bdist.linux-armv7l/wheel
2020-12-05T16:23:39,908   running install
2020-12-05T16:23:39,910   running install_lib
2020-12-05T16:23:39,917   creating build/bdist.linux-armv7l
2020-12-05T16:23:39,918   creating build/bdist.linux-armv7l/wheel
2020-12-05T16:23:39,920   creating build/bdist.linux-armv7l/wheel/rcsb
2020-12-05T16:23:39,922   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-12-05T16:23:39,926   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-05T16:23:39,927   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-05T16:23:39,931   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,932   copying build/lib/rcsb/utils/chemref/PsiModProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,936   copying build/lib/rcsb/utils/chemref/PharosProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,940   copying build/lib/rcsb/utils/chemref/CARDProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,943   copying build/lib/rcsb/utils/chemref/PubChemProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,948   copying build/lib/rcsb/utils/chemref/ResidProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,954   copying build/lib/rcsb/utils/chemref/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,959   copying build/lib/rcsb/utils/chemref/ResidReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,964   copying build/lib/rcsb/utils/chemref/PharosReadSqlDump.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,967   copying build/lib/rcsb/utils/chemref/ChEMBLProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,971   copying build/lib/rcsb/utils/chemref/AtcProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,975   copying build/lib/rcsb/utils/chemref/DrugBankProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,978   copying build/lib/rcsb/utils/chemref/DrugCentralProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,981   copying build/lib/rcsb/utils/chemref/ChemCompModelProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,985   copying build/lib/rcsb/utils/chemref/DrugBankReader.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,991   copying build/lib/rcsb/utils/chemref/PubChemUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:39,999   copying build/lib/rcsb/utils/chemref/ChemCompProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chemref
2020-12-05T16:23:40,004   running install_egg_info
2020-12-05T16:23:40,047   running egg_info
2020-12-05T16:23:40,048   writing rcsb.utils.chemref.egg-info/PKG-INFO
2020-12-05T16:23:40,052   writing requirements to rcsb.utils.chemref.egg-info/requires.txt
2020-12-05T16:23:40,054   writing dependency_links to rcsb.utils.chemref.egg-info/dependency_links.txt
2020-12-05T16:23:40,056   writing top-level names to rcsb.utils.chemref.egg-info/top_level.txt
2020-12-05T16:23:40,058   writing entry points to rcsb.utils.chemref.egg-info/entry_points.txt
2020-12-05T16:23:40,067   reading manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-05T16:23:40,071   reading manifest template 'MANIFEST.in'
2020-12-05T16:23:40,079   writing manifest file 'rcsb.utils.chemref.egg-info/SOURCES.txt'
2020-12-05T16:23:40,081   Copying rcsb.utils.chemref.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.63-py3.5.egg-info
2020-12-05T16:23:40,103   running install_scripts
2020-12-05T16:23:40,268   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chemref-0.63.dist-info/WHEEL
2020-12-05T16:23:40,515   Building wheel for rcsb-utils-chemref (setup.py): finished with status 'done'
2020-12-05T16:23:40,518   Created wheel for rcsb-utils-chemref: filename=rcsb.utils.chemref-0.63-py2.py3-none-any.whl size=42257 sha256=b2d1b7c81c8b874e3bf722aea138d7cfc3e0adca19ec26e6bfc16039a3bec9ba
2020-12-05T16:23:40,519   Stored in directory: /tmp/pip-ephem-wheel-cache-n0m4d5we/wheels/a5/68/9c/3b78473463e322d0057344f7a5c41f2090bd8de4edfeb73ef9
2020-12-05T16:23:40,523 Successfully built rcsb-utils-chemref
2020-12-05T16:23:40,530 Removed build tracker: '/tmp/pip-req-tracker-jt25qayu'