2020-12-13T18:34:52,646 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2020-12-13T18:34:53,330 Created temporary directory: /tmp/pip-ephem-wheel-cache-s41ejdl8 2020-12-13T18:34:53,335 Created temporary directory: /tmp/pip-req-tracker-mbei3nev 2020-12-13T18:34:53,336 Initialized build tracking at /tmp/pip-req-tracker-mbei3nev 2020-12-13T18:34:53,336 Created build tracker: /tmp/pip-req-tracker-mbei3nev 2020-12-13T18:34:53,337 Entered build tracker: /tmp/pip-req-tracker-mbei3nev 2020-12-13T18:34:53,338 Created temporary directory: /tmp/pip-wheel-ag7np8sq 2020-12-13T18:34:53,357 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com 2020-12-13T18:34:53,360 2 location(s) to search for versions of jcvi: 2020-12-13T18:34:53,360 * https://pypi.org/simple/jcvi/ 2020-12-13T18:34:53,360 * https://pypi.ngc.nvidia.com/jcvi/ 2020-12-13T18:34:53,361 Fetching project page and analyzing links: https://pypi.org/simple/jcvi/ 2020-12-13T18:34:53,363 Getting page https://pypi.org/simple/jcvi/ 2020-12-13T18:34:53,367 Found index url https://pypi.org/simple 2020-12-13T18:34:54,018 Found link https://files.pythonhosted.org/packages/9a/4f/c53e7eb012d5a42fca39fa8669a7d58f14673abbbe328b8c7e775cbf92cb/jcvi-0.4.7.tar.gz#sha256=9181ce8cf9768c1829f72c542aa801ba7d21f218e50c0776da5e1d110479d96d (from https://pypi.org/simple/jcvi/), version: 0.4.7 2020-12-13T18:34:54,019 Found link https://files.pythonhosted.org/packages/4a/9d/a6b537b0be8725d94c92546c4ba8de4d6fb97df654d7c12b6fe000049491/jcvi-0.4.8.tar.gz#sha256=8465dc624ecbb82c89ee6872ce6779634b877443ffe836124ef307cf76c6378a (from https://pypi.org/simple/jcvi/), version: 0.4.8 2020-12-13T18:34:54,020 Found link https://files.pythonhosted.org/packages/ac/53/ef3eaa2c0473a0553c6b5f2446885b3af401e53174e33d682d82e15d3795/jcvi-0.4.9.tar.gz#sha256=10a4d30f2148aa580e8e672a5aaba10e153a578b35e951ec69f2b4b679d90420 (from https://pypi.org/simple/jcvi/), version: 0.4.9 2020-12-13T18:34:54,021 Found link https://files.pythonhosted.org/packages/73/2f/d2b36ea11caca5b0edce0786aa6cc09b3b42beacebb8adee3f6db905093d/jcvi-0.4.10.tar.gz#sha256=654d0f3a2c099f9d81a4dc64af62a7d0f2e63b642b9af526bd1ef74687853418 (from https://pypi.org/simple/jcvi/), version: 0.4.10 2020-12-13T18:34:54,022 Found link https://files.pythonhosted.org/packages/0d/79/f86d87cb9f3a987a497a022422ec858d2788988f42067f773f3ca078c089/jcvi-0.4.12.tar.gz#sha256=93425f1fae03c8df20d71b3d5ceb3e8a24d979d5204b77823da54f50aeca05c4 (from https://pypi.org/simple/jcvi/), version: 0.4.12 2020-12-13T18:34:54,023 Found link https://files.pythonhosted.org/packages/95/68/96c4e56778504252a4a498c1b2f50561b73938812dd4e280a931bb3d1ecc/jcvi-0.5.1.tar.gz#sha256=2adb070783a773889a88e55724d823b0856ab490523f0a12b6d3a235fd6bac4c (from https://pypi.org/simple/jcvi/), version: 0.5.1 2020-12-13T18:34:54,024 Found link https://files.pythonhosted.org/packages/2e/58/a0e6ee654d1fbed322ab5756fe964a8a52f52850520eec0baffe6d120afc/jcvi-0.5.2.tar.gz#sha256=51a90442bb5ee9dc4a15b84816489477e593ff4c65925ab5d08ed1b8d672b984 (from https://pypi.org/simple/jcvi/), version: 0.5.2 2020-12-13T18:34:54,024 Found link https://files.pythonhosted.org/packages/21/d6/2f7d7a1ed2df03a36839a7556a663bfdc96755dc60907faa67ad03af0730/jcvi-0.5.3.tar.gz#sha256=589cc5edc564b3b6019a86422dfcb2cd44c4f59606bcf1ce310b5911d15ba21c (from https://pypi.org/simple/jcvi/), version: 0.5.3 2020-12-13T18:34:54,025 Found link https://files.pythonhosted.org/packages/fb/a1/ae58b6664ceaf79e0aa367e371e5c76e0699c0b9d7baec999e3d3a2e7052/jcvi-0.5.5.tar.gz#sha256=82e55a04126695d7c88d0d2516fcff9c8e69272bb733ce05ff0c55173253bc20 (from https://pypi.org/simple/jcvi/), version: 0.5.5 2020-12-13T18:34:54,026 Found link https://files.pythonhosted.org/packages/f6/8a/d35b5b34516256b5e937318b5ef5582ca6e03d131826454c44289a84b7a0/jcvi-0.5.6.tar.gz#sha256=a65c2f058931ed09b9218c116840b3d20b59bc0708295f1cd596265885aa760f (from https://pypi.org/simple/jcvi/), version: 0.5.6 2020-12-13T18:34:54,027 Found link https://files.pythonhosted.org/packages/fd/d7/2739abb3779ccef74fd9f41062fa0a357b0434d3c261faa5bef044853292/jcvi-0.5.7.tar.gz#sha256=39e42dacd6bedeb4cb66d11198fc5eb67fef68ec19c0906f6ce9eae5f853b758 (from https://pypi.org/simple/jcvi/), version: 0.5.7 2020-12-13T18:34:54,028 Found link https://files.pythonhosted.org/packages/b5/e7/14df7241963f68cfef3fccd5b907c217f397cd90e83f73f4dfceedd9a4d2/jcvi-0.5.8.tar.gz#sha256=fbab5cb7b19f1c069386adb29c5e93e2422107b8fbf527fcb885f65d7559a6af (from https://pypi.org/simple/jcvi/), version: 0.5.8 2020-12-13T18:34:54,029 Found link https://files.pythonhosted.org/packages/6f/6b/65638dc603fa922672380f32d5d7e8b263cc4d0a5f2a166701b50e3a1d88/jcvi-0.5.9.tar.gz#sha256=0dd9d09881170008d4c7adaf0f8bbe2c762e353cfddc060786e5ac4b3328d9f4 (from https://pypi.org/simple/jcvi/), version: 0.5.9 2020-12-13T18:34:54,030 Found link https://files.pythonhosted.org/packages/4d/b2/77a3e0bba015cd3d3edb3bd4e7065b0090c0cf77560c24681464ab73042e/jcvi-0.6.1.tar.gz#sha256=4fb330c23d5c78c375ab7233c62c6392db439b97a9e1745912f547c8310660a9 (from https://pypi.org/simple/jcvi/), version: 0.6.1 2020-12-13T18:34:54,031 Found link https://files.pythonhosted.org/packages/3a/c3/b488edc6a7ef108636c86fd3673bcfa53a1dc5f4ad45c5c5652a29f32226/jcvi-0.6.2.tar.gz#sha256=12818ddaf7ebe1c583a3e2440b7569709370f043c54c544768affc4504a63dcd (from https://pypi.org/simple/jcvi/), version: 0.6.2 2020-12-13T18:34:54,032 Found link https://files.pythonhosted.org/packages/b1/d4/2d2d6f252243402231b000eb4d4850ed6303064f5586b00d69364c6ee60d/jcvi-0.6.6.tar.gz#sha256=720e6ffa0c846dfc3bae2560c24a8e39ed0709b0ab121c0b331cea99ae0e6d25 (from https://pypi.org/simple/jcvi/), version: 0.6.6 2020-12-13T18:34:54,033 Found link https://files.pythonhosted.org/packages/1f/0a/4d1328c1cb4244d445aad2d7009f25d1490bc6d557cc4863a4ac5c42bc62/jcvi-0.6.9.tar.gz#sha256=e8f953a834ece1a017ffb5a085c710c81ba6b3bcbc91aa794aa383abf903b5ce (from https://pypi.org/simple/jcvi/), version: 0.6.9 2020-12-13T18:34:54,034 Found link https://files.pythonhosted.org/packages/27/88/6b2048b283c8ee70456e5bc7be04251020fd9b3929df13b6850d16e78e45/jcvi-0.7.1.tar.gz#sha256=bf5bb92160bb1942b615013315404daf263da2f629b3bc141a7cb7f1dc211d3a (from https://pypi.org/simple/jcvi/), version: 0.7.1 2020-12-13T18:34:54,035 Found link https://files.pythonhosted.org/packages/c1/57/226e744b4ad8c43086b050a710cc13012fc07a881847d7cfc98f10c2a35c/jcvi-0.7.3.tar.gz#sha256=58490d9ebb986ca04e4c4bcebde55edafbf267163c15f87eb250b6b34f3866dd (from https://pypi.org/simple/jcvi/), version: 0.7.3 2020-12-13T18:34:54,036 Found link https://files.pythonhosted.org/packages/c4/f9/1bc024ccde1dec0e052c3c66496533aa2e12b271be82c605fa0ee50c1611/jcvi-0.7.4.tar.gz#sha256=4dfbc5bd46bbeef4a6b0da2198b522f8350aeb5fd2a368d16f7f8ba1226347b8 (from https://pypi.org/simple/jcvi/), version: 0.7.4 2020-12-13T18:34:54,036 Found link https://files.pythonhosted.org/packages/e9/dd/64edf8d5ff645b2b186030df11516cd90daef149b5a3b8658fbe52d3c804/jcvi-0.7.5.tar.gz#sha256=469186839a55f6ccb0930a812fb4166833d4977f80faf646934d8042321674b2 (from https://pypi.org/simple/jcvi/), version: 0.7.5 2020-12-13T18:34:54,037 Found link https://files.pythonhosted.org/packages/e2/4b/d87a95002dd277ffe9f221afc4163714e6fc81a1d6edbcf387603c579830/jcvi-0.7.6.tar.gz#sha256=7367ca817d33976a029c1eb30732ffd10077ce25789e3f666bd37bb855955090 (from https://pypi.org/simple/jcvi/), version: 0.7.6 2020-12-13T18:34:54,038 Found link https://files.pythonhosted.org/packages/e1/e7/60e9e2c221731f6c0305784ac952c431625bf7be41a39464a568f4e3b18c/jcvi-0.7.7.tar.gz#sha256=561b9800f17542b29867e71488ddbd5a8dec72e5d0024a742e5917bc36798e5f (from https://pypi.org/simple/jcvi/), version: 0.7.7 2020-12-13T18:34:54,039 Found link https://files.pythonhosted.org/packages/2f/4c/745403735f07d6f4f83d0779cbfe1b565a366c5caba854bff17970b7b524/jcvi-0.8.4.tar.gz#sha256=d326ef550fa56b45190b3f5de7c2917af9d64ace8d22592cd65ceafad10b5280 (from https://pypi.org/simple/jcvi/), version: 0.8.4 2020-12-13T18:34:54,040 Found link https://files.pythonhosted.org/packages/73/be/2308651186c01a36a08fa327be49e6f7d0190211a34d11d243fe889e6de1/jcvi-0.8.12.tar.gz#sha256=dbe6422b388f92abf806f5c21ec3fd050b6a1a5471bd459b538827e109224d8d (from https://pypi.org/simple/jcvi/), version: 0.8.12 2020-12-13T18:34:54,041 Found link https://files.pythonhosted.org/packages/80/0a/b8a9719ae0a6e42a8c3ff5156dd924001278516d2b78d243a1cfa6311c94/jcvi-0.9.6.tar.gz#sha256=eaaf422c97376c0f35b2c98c3413bbef03e925d4bf0becf492a2b4028912891e (from https://pypi.org/simple/jcvi/), version: 0.9.6 2020-12-13T18:34:54,042 Found link https://files.pythonhosted.org/packages/48/9b/0c05b8fc3e088eecea6450170681d486e8a3cde9f45a39ce62d636ae219f/jcvi-0.9.9.tar.gz#sha256=2100581bc91c94599471a22fc9401ea4b24d08186b90120ab022eda3c75ced0e (from https://pypi.org/simple/jcvi/), version: 0.9.9 2020-12-13T18:34:54,043 Found link https://files.pythonhosted.org/packages/d7/cb/84dfb1c26e0df77f01bad924c8dccc9f311951f13fa73e897b86293406e4/jcvi-0.9.10.tar.gz#sha256=1a28a16f14ed2f6e4df1a0720aa3a0aa5d7b7d855cb2ce55a65da4afb49ce721 (from https://pypi.org/simple/jcvi/), version: 0.9.10 2020-12-13T18:34:54,044 Found link https://files.pythonhosted.org/packages/f2/86/0f8df6719496e325af9c5373081b3f88e854ffdb128a1f412124011fbe23/jcvi-0.9.11.tar.gz#sha256=e7719014ebbd82107806adda6c784d73cd6ba5036289ccb2058800ad22bbad7a (from https://pypi.org/simple/jcvi/), version: 0.9.11 2020-12-13T18:34:54,044 Found link https://files.pythonhosted.org/packages/b4/fb/9aac88999c9eb01575ec8e0924df82b247b4df1e626bbc853caccff3e83e/jcvi-0.9.12.tar.gz#sha256=4ac2a5adc03c95826cf2f6359f181c7cccb8cdb6a3f02f6718b045d439a0254e (from https://pypi.org/simple/jcvi/), version: 0.9.12 2020-12-13T18:34:54,045 Found link https://files.pythonhosted.org/packages/f4/ec/5b12cd16bd7ece78e740974aa190b554e61c9ec817ecfbaf090efb715a31/jcvi-0.9.13.tar.gz#sha256=f333a091fae5d9e40c0ed7eb31064537f5e87fe4ef6c231977552938f61e7248 (from https://pypi.org/simple/jcvi/), version: 0.9.13 2020-12-13T18:34:54,046 Found link https://files.pythonhosted.org/packages/9b/4c/c454c7e965d28b1ef90b186be5502aee2460ecd242513ef7ca28ce4691e5/jcvi-0.9.14.tar.gz#sha256=90b7300ba979d41b443c0c6af6768a7bddee0ae2abd5a87a8bc90f044d75a9de (from https://pypi.org/simple/jcvi/), version: 0.9.14 2020-12-13T18:34:54,047 Found link https://files.pythonhosted.org/packages/b1/2a/6630b839be29f1d0ce2f6059ee0889eb8e65bee5c80216901f0edf3a7dd6/jcvi-1.0.1.tar.gz#sha256=2ea7b692b55485c53aba9dee58f0e218df841ea7b55454680c053ad8fee6e647 (from https://pypi.org/simple/jcvi/), version: 1.0.1 2020-12-13T18:34:54,048 Found link https://files.pythonhosted.org/packages/92/5c/f48edd25912dd836f721aba88e069567070583bea4c5e8f101d4a8d39c63/jcvi-1.0.2.tar.gz#sha256=76cb492f65c0d3766923ddbcbc0f074d32ac603428f5b34fc910fff4983ebfc9 (from https://pypi.org/simple/jcvi/), version: 1.0.2 2020-12-13T18:34:54,049 Found link https://files.pythonhosted.org/packages/bc/96/9cee88ea244fef540ca144a19c99e859102641861df833a075e3e5824aaf/jcvi-1.0.3.tar.gz#sha256=6115882020338d53058b2d35ccbc451f737cbe0205320742fc63c8c41b46d7df (from https://pypi.org/simple/jcvi/), version: 1.0.3 2020-12-13T18:34:54,050 Found link https://files.pythonhosted.org/packages/00/9a/f43fe374eb9e88c92c468fe7d834dc1a5cf7583f3c0d72646a237ea3bf74/jcvi-1.0.4.tar.gz#sha256=3d9298e43f78451f10bf731f88047da47fe8b23ba9c767b5f5158809d79295c8 (from https://pypi.org/simple/jcvi/), version: 1.0.4 2020-12-13T18:34:54,051 Found link https://files.pythonhosted.org/packages/57/a2/c4366a77f1ffacfe04a0b338c18a675d878728e89d4ef2b26ae5c15f00d3/jcvi-1.0.5.tar.gz#sha256=5dd0515541548cee07a0cbb26bec70cdea8d502fc365971c420f3b919ef3074b (from https://pypi.org/simple/jcvi/), version: 1.0.5 2020-12-13T18:34:54,051 Found link https://files.pythonhosted.org/packages/95/99/7dbf1fe691d207f09fb898775ee72afb5174253d09bf9a37978860d00b5a/jcvi-1.0.6.tar.gz#sha256=49565d9dfe7519ee58a365a2507162f1483943370a89dfdc357650bbc3540c25 (from https://pypi.org/simple/jcvi/), version: 1.0.6 2020-12-13T18:34:54,052 Found link https://files.pythonhosted.org/packages/b9/81/99c5b7456aa490483fe208753894196113656e9cc69af47b39d42bf218c9/jcvi-1.0.7.tar.gz#sha256=6387cb5ae5e8e566117cdc043f87894a0108066b7ce2ce640a885537943eb153 (from https://pypi.org/simple/jcvi/), version: 1.0.7 2020-12-13T18:34:54,053 Found link https://files.pythonhosted.org/packages/79/d2/d570003c0045ea92485ea9c5e8f0561d47bbf18ea8951fe31450ca8961ff/jcvi-1.0.8.tar.gz#sha256=64cf47d3bbcc54dabfa8e20bdae7693dba8de8bd67e6c9c70d3ff16f24cf279e (from https://pypi.org/simple/jcvi/), version: 1.0.8 2020-12-13T18:34:54,054 Found link https://files.pythonhosted.org/packages/97/6f/fb49e1603d4617f0a136f86a94e035be5cf1fe34b9ff59ddfc7e5fc5d04d/jcvi-1.0.9.tar.gz#sha256=b03f2385639b601f111c812872763fee6699aa8f2683431347520f5bf9155480 (from https://pypi.org/simple/jcvi/), version: 1.0.9 2020-12-13T18:34:54,055 Found link https://files.pythonhosted.org/packages/9d/ec/6c6329502b18bcaf244d19a66aab8df287ac99c7cbaa0c047a6c18844de8/jcvi-1.0.10.tar.gz#sha256=56881652b39662a54d32c2f6387e9c58e40a925ac326c9bf1b4ba929b5a86562 (from https://pypi.org/simple/jcvi/), version: 1.0.10 2020-12-13T18:34:54,056 Found link https://files.pythonhosted.org/packages/a4/a0/a9827217e298eefcf6a9e94e26f33512204f50954c6209b8eed418cbe9d7/jcvi-1.0.11.tar.gz#sha256=ced5c0f3c6b0356292aa24736cf9c7848da71dd27c8c9e1e8d7acb77bc620ae3 (from https://pypi.org/simple/jcvi/), version: 1.0.11 2020-12-13T18:34:54,057 Found link https://files.pythonhosted.org/packages/04/42/7b9185888061799c56365598139239d4a48d074dfd2d0ff46c85cc032542/jcvi-1.0.12.tar.gz#sha256=3e55598c6be75b991a76904efe002c9c10a970244f46b2443fe333f934d265fd (from https://pypi.org/simple/jcvi/), version: 1.0.12 2020-12-13T18:34:54,058 Found link https://files.pythonhosted.org/packages/2c/e3/587dd5ddba13f6eff78a78b85d0dc7d008b15e5e28d04fc4081cff9f2ca6/jcvi-1.0.13.tar.gz#sha256=659ada559937f5914113a7a60bdc41bd58ddeadf7c1db974e11271b526e8c963 (from https://pypi.org/simple/jcvi/), version: 1.0.13 2020-12-13T18:34:54,058 Found link https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14 2020-12-13T18:34:54,059 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/jcvi/ 2020-12-13T18:34:54,060 Getting page https://pypi.ngc.nvidia.com/jcvi/ 2020-12-13T18:34:54,063 Found index url https://pypi.ngc.nvidia.com 2020-12-13T18:34:55,073 Could not fetch URL https://pypi.ngc.nvidia.com/jcvi/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/jcvi/ - skipping 2020-12-13T18:34:55,106 Given no hashes to check 1 links for project 'jcvi': discarding no candidates 2020-12-13T18:34:55,109 Using version 1.0.14 (newest of versions: 1.0.14) 2020-12-13T18:34:55,118 Collecting jcvi==1.0.14 2020-12-13T18:34:55,122 Created temporary directory: /tmp/pip-unpack-cgamj0rm 2020-12-13T18:34:55,445 Downloading jcvi-1.0.14.tar.gz (849 kB) 2020-12-13T18:34:57,347 Added jcvi==1.0.14 from https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 to build tracker '/tmp/pip-req-tracker-mbei3nev' 2020-12-13T18:34:57,351 Running setup.py (path:/tmp/pip-wheel-ag7np8sq/jcvi/setup.py) egg_info for package jcvi 2020-12-13T18:34:57,353 Created temporary directory: /tmp/pip-pip-egg-info-yvpepm_i 2020-12-13T18:34:57,354 Running command python setup.py egg_info 2020-12-13T18:35:01,362 running egg_info 2020-12-13T18:35:01,367 creating /tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info 2020-12-13T18:35:01,369 writing /tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info/PKG-INFO 2020-12-13T18:35:01,378 writing requirements to /tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info/requires.txt 2020-12-13T18:35:01,382 writing dependency_links to /tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info/dependency_links.txt 2020-12-13T18:35:01,386 writing top-level names to /tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info/top_level.txt 2020-12-13T18:35:01,393 writing manifest file '/tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info/SOURCES.txt' 2020-12-13T18:35:01,451 reading manifest file '/tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info/SOURCES.txt' 2020-12-13T18:35:01,454 reading manifest template 'MANIFEST.in' 2020-12-13T18:35:01,483 writing manifest file '/tmp/pip-pip-egg-info-yvpepm_i/jcvi.egg-info/SOURCES.txt' 2020-12-13T18:35:01,486 /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1.0.14' to '1.0.14' 2020-12-13T18:35:01,487 warnings.warn(tmpl.format(**locals())) 2020-12-13T18:35:01,703 Source in /tmp/pip-wheel-ag7np8sq/jcvi has version 1.0.14, which satisfies requirement jcvi==1.0.14 from https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 2020-12-13T18:35:01,705 Removed jcvi==1.0.14 from https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 from build tracker '/tmp/pip-req-tracker-mbei3nev' 2020-12-13T18:35:01,712 Building wheels for collected packages: jcvi 2020-12-13T18:35:01,721 Created temporary directory: /tmp/pip-wheel-rw8gwegs 2020-12-13T18:35:01,722 Building wheel for jcvi (setup.py): started 2020-12-13T18:35:01,723 Destination directory: /tmp/pip-wheel-rw8gwegs 2020-12-13T18:35:01,724 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ag7np8sq/jcvi/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ag7np8sq/jcvi/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-rw8gwegs 2020-12-13T18:35:05,295 /usr/local/lib/python3.5/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1.0.14' to '1.0.14' 2020-12-13T18:35:05,296 warnings.warn(tmpl.format(**locals())) 2020-12-13T18:35:05,447 running bdist_wheel 2020-12-13T18:35:05,458 running build 2020-12-13T18:35:05,459 running build_py 2020-12-13T18:35:05,471 creating build 2020-12-13T18:35:05,471 creating build/lib.linux-armv7l-3.5 2020-12-13T18:35:05,473 creating build/lib.linux-armv7l-3.5/jcvi 2020-12-13T18:35:05,476 copying jcvi/_version.py -> build/lib.linux-armv7l-3.5/jcvi 2020-12-13T18:35:05,480 copying jcvi/__init__.py -> build/lib.linux-armv7l-3.5/jcvi 2020-12-13T18:35:05,485 creating build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,487 copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,493 copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,498 copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,504 copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,512 copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,521 copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,527 copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,535 copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,543 copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,548 copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,560 copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/compara 2020-12-13T18:35:05,572 creating build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,575 copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,582 copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,587 copying jcvi/apps/console.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,591 copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,597 copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,605 copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,609 copying jcvi/apps/cap3.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,614 copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,620 copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,626 copying jcvi/apps/tesseract.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,631 copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,637 copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,641 copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,649 copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,655 copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,664 copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,669 copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,677 copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,680 copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,691 copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,695 copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,699 copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,704 copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,711 copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,717 copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,723 copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,728 copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,733 copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.5/jcvi/apps 2020-12-13T18:35:05,742 creating build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,744 copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,749 copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,754 copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,758 copying jcvi/formats/posmap.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,763 copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,770 copying jcvi/formats/ace.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,776 copying jcvi/formats/sbt.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,783 copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,795 copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,801 copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,805 copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,812 copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,824 copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,840 copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,849 copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,857 copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,863 copying jcvi/formats/btab.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,870 copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,875 copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,880 copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,886 copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,898 copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,908 copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,915 copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,921 copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,926 copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,934 copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,941 copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,945 copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,949 copying jcvi/formats/fpc.py -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:05,959 creating build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:05,961 copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:05,969 copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:05,975 copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:05,979 copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:05,984 copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:05,989 copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:05,996 copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:06,004 copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:06,011 copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:06,016 copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:06,026 copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:06,031 copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.5/jcvi/annotation 2020-12-13T18:35:06,039 creating build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,041 copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,046 copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,050 copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,057 copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,064 copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,070 copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,076 copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,083 copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,087 copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,091 copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,096 copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,102 copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/algorithms 2020-12-13T18:35:06,111 creating build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,113 copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,122 copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,128 copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,133 copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,140 copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,146 copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,150 copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,156 copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,163 copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,167 copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.5/jcvi/variation 2020-12-13T18:35:06,174 creating build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,176 copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,182 copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,187 copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,193 copying jcvi/utils/brewer2mpl.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,199 copying jcvi/utils/natsort.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,205 copying jcvi/utils/counter.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,212 copying jcvi/utils/iter.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,218 copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,225 copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,230 copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,235 copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,242 copying jcvi/utils/progressbar.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,251 copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,255 copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,262 copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,267 copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,271 copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.5/jcvi/utils 2020-12-13T18:35:06,279 creating build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,281 copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,288 copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,294 copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,302 copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,307 copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,312 copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,319 copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,326 copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,335 copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,342 copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,348 copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,352 copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,357 copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,363 copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,368 copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,376 copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,382 copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,385 copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,391 copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,397 copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,402 copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,410 copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,418 copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/graphics 2020-12-13T18:35:06,426 creating build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,428 copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,434 copying jcvi/assembly/pbjelly.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,438 copying jcvi/assembly/amos.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,444 copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,450 copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,456 copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,467 copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,474 copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,483 copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,491 copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,497 copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,505 copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,511 copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,517 copying jcvi/assembly/unitig.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,523 copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,531 copying jcvi/assembly/sspace.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,537 copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,551 copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,558 copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,563 copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,572 copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,578 copying jcvi/assembly/meraculous.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,583 copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,591 copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,600 copying jcvi/assembly/bambus.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,606 copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,610 copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,624 creating build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,627 copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,633 copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,646 copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,653 copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,657 copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,664 copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,671 copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,678 copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,686 copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,691 copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,697 copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,702 copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,710 copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,715 copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,722 copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,729 copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,738 copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.5/jcvi/projects 2020-12-13T18:35:06,746 creating build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,748 copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,752 running egg_info 2020-12-13T18:35:06,778 writing requirements to jcvi.egg-info/requires.txt 2020-12-13T18:35:06,781 writing jcvi.egg-info/PKG-INFO 2020-12-13T18:35:06,787 writing top-level names to jcvi.egg-info/top_level.txt 2020-12-13T18:35:06,789 writing dependency_links to jcvi.egg-info/dependency_links.txt 2020-12-13T18:35:06,835 reading manifest file 'jcvi.egg-info/SOURCES.txt' 2020-12-13T18:35:06,850 reading manifest template 'MANIFEST.in' 2020-12-13T18:35:06,888 writing manifest file 'jcvi.egg-info/SOURCES.txt' 2020-12-13T18:35:06,910 copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:06,917 copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:06,922 copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,931 copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,946 copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,954 copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,961 copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,971 copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,977 copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,984 copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:06,989 copying jcvi/utils/data/colorbrewer_all_schemes.json -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:07,005 copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:07,012 copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:07,024 copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:07,030 copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.5/jcvi/utils/data 2020-12-13T18:35:07,070 UPDATING build/lib.linux-armv7l-3.5/jcvi/_version.py 2020-12-13T18:35:07,073 set build/lib.linux-armv7l-3.5/jcvi/_version.py to 'v1.0.14' 2020-12-13T18:35:07,074 running build_ext 2020-12-13T18:35:07,272 cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c 2020-12-13T18:35:08,945 /usr/local/lib/python3.5/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ag7np8sq/jcvi/jcvi/assembly/chic.pyx 2020-12-13T18:35:08,946 tree = Parsing.p_module(s, pxd, full_module_name) 2020-12-13T18:35:13,380 cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c 2020-12-13T18:35:15,064 building 'jcvi.assembly.chic' extension 2020-12-13T18:35:15,066 creating build/temp.linux-armv7l-3.5 2020-12-13T18:35:15,068 creating build/temp.linux-armv7l-3.5/jcvi 2020-12-13T18:35:15,070 creating build/temp.linux-armv7l-3.5/jcvi/assembly 2020-12-13T18:35:15,073 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-U0sDci/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.5/dist-packages/numpy/core/include -I/usr/include/python3.5m -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.5/jcvi/assembly/chic.o -O3 2020-12-13T18:35:15,705 In file included from /usr/local/lib/python3.5/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832:0, 2020-12-13T18:35:15,706 from /usr/local/lib/python3.5/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2020-12-13T18:35:15,707 from /usr/local/lib/python3.5/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2020-12-13T18:35:15,708 from jcvi/assembly/chic.c:610: 2020-12-13T18:35:15,708 /usr/local/lib/python3.5/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2020-12-13T18:35:15,709 #warning "Using deprecated NumPy API, disable it with " \ 2020-12-13T18:35:15,710 ^~~~~~~ 2020-12-13T18:35:22,968 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fdebug-prefix-map=/build/python3.5-U0sDci/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.5/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.5/jcvi/assembly/chic.cpython-35m-arm-linux-gnueabihf.so 2020-12-13T18:35:23,201 building 'jcvi.formats.cblast' extension 2020-12-13T18:35:23,203 creating build/temp.linux-armv7l-3.5/jcvi/formats 2020-12-13T18:35:23,205 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -fdebug-prefix-map=/build/python3.5-U0sDci/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.5m -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.5/jcvi/formats/cblast.o -O3 2020-12-13T18:35:36,199 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fdebug-prefix-map=/build/python3.5-U0sDci/python3.5-3.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.5/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.5/jcvi/formats/cblast.cpython-35m-arm-linux-gnueabihf.so 2020-12-13T18:35:36,467 installing to build/bdist.linux-armv7l/wheel 2020-12-13T18:35:36,468 running install 2020-12-13T18:35:36,469 running install_lib 2020-12-13T18:35:36,478 creating build/bdist.linux-armv7l 2020-12-13T18:35:36,479 creating build/bdist.linux-armv7l/wheel 2020-12-13T18:35:36,483 creating build/bdist.linux-armv7l/wheel/jcvi 2020-12-13T18:35:36,485 copying build/lib.linux-armv7l-3.5/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi 2020-12-13T18:35:36,491 creating build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,494 copying build/lib.linux-armv7l-3.5/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,501 copying build/lib.linux-armv7l-3.5/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,508 copying build/lib.linux-armv7l-3.5/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,516 copying build/lib.linux-armv7l-3.5/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,525 copying build/lib.linux-armv7l-3.5/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,533 copying build/lib.linux-armv7l-3.5/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,539 copying build/lib.linux-armv7l-3.5/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,546 copying build/lib.linux-armv7l-3.5/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,553 copying build/lib.linux-armv7l-3.5/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,558 copying build/lib.linux-armv7l-3.5/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,570 copying build/lib.linux-armv7l-3.5/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2020-12-13T18:35:36,579 creating build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,581 copying build/lib.linux-armv7l-3.5/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,589 copying build/lib.linux-armv7l-3.5/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,595 copying build/lib.linux-armv7l-3.5/jcvi/apps/console.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,601 copying build/lib.linux-armv7l-3.5/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,609 copying build/lib.linux-armv7l-3.5/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,619 copying build/lib.linux-armv7l-3.5/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,625 copying build/lib.linux-armv7l-3.5/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,632 copying build/lib.linux-armv7l-3.5/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,639 copying build/lib.linux-armv7l-3.5/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,647 copying build/lib.linux-armv7l-3.5/jcvi/apps/tesseract.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,653 copying build/lib.linux-armv7l-3.5/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,661 copying build/lib.linux-armv7l-3.5/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,667 copying build/lib.linux-armv7l-3.5/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,676 copying build/lib.linux-armv7l-3.5/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,683 copying build/lib.linux-armv7l-3.5/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,692 copying build/lib.linux-armv7l-3.5/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,699 copying build/lib.linux-armv7l-3.5/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,709 copying build/lib.linux-armv7l-3.5/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,713 copying build/lib.linux-armv7l-3.5/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,726 copying build/lib.linux-armv7l-3.5/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,732 copying build/lib.linux-armv7l-3.5/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,738 copying build/lib.linux-armv7l-3.5/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,745 copying build/lib.linux-armv7l-3.5/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,752 copying build/lib.linux-armv7l-3.5/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,758 copying build/lib.linux-armv7l-3.5/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,765 copying build/lib.linux-armv7l-3.5/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,770 copying build/lib.linux-armv7l-3.5/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,777 copying build/lib.linux-armv7l-3.5/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2020-12-13T18:35:36,786 creating build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,788 copying build/lib.linux-armv7l-3.5/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,795 copying build/lib.linux-armv7l-3.5/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,801 copying build/lib.linux-armv7l-3.5/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,807 copying build/lib.linux-armv7l-3.5/jcvi/formats/cblast.cpython-35m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,853 copying build/lib.linux-armv7l-3.5/jcvi/formats/posmap.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,861 copying build/lib.linux-armv7l-3.5/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,867 copying build/lib.linux-armv7l-3.5/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,875 copying build/lib.linux-armv7l-3.5/jcvi/formats/ace.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,882 copying build/lib.linux-armv7l-3.5/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,888 copying build/lib.linux-armv7l-3.5/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,901 copying build/lib.linux-armv7l-3.5/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,910 copying build/lib.linux-armv7l-3.5/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,916 copying build/lib.linux-armv7l-3.5/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,922 copying build/lib.linux-armv7l-3.5/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,934 copying build/lib.linux-armv7l-3.5/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,950 copying build/lib.linux-armv7l-3.5/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,959 copying build/lib.linux-armv7l-3.5/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,966 copying build/lib.linux-armv7l-3.5/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,973 copying build/lib.linux-armv7l-3.5/jcvi/formats/btab.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,980 copying build/lib.linux-armv7l-3.5/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,986 copying build/lib.linux-armv7l-3.5/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,992 copying build/lib.linux-armv7l-3.5/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:36,998 copying build/lib.linux-armv7l-3.5/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,012 copying build/lib.linux-armv7l-3.5/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,021 copying build/lib.linux-armv7l-3.5/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,026 copying build/lib.linux-armv7l-3.5/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,030 copying build/lib.linux-armv7l-3.5/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,034 copying build/lib.linux-armv7l-3.5/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,042 copying build/lib.linux-armv7l-3.5/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,051 copying build/lib.linux-armv7l-3.5/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,056 copying build/lib.linux-armv7l-3.5/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,062 copying build/lib.linux-armv7l-3.5/jcvi/formats/fpc.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2020-12-13T18:35:37,069 creating build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,072 copying build/lib.linux-armv7l-3.5/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,079 copying build/lib.linux-armv7l-3.5/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,087 copying build/lib.linux-armv7l-3.5/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,093 copying build/lib.linux-armv7l-3.5/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,100 copying build/lib.linux-armv7l-3.5/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,106 copying build/lib.linux-armv7l-3.5/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,113 copying build/lib.linux-armv7l-3.5/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,121 copying build/lib.linux-armv7l-3.5/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,128 copying build/lib.linux-armv7l-3.5/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,133 copying build/lib.linux-armv7l-3.5/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,143 copying build/lib.linux-armv7l-3.5/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,147 copying build/lib.linux-armv7l-3.5/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2020-12-13T18:35:37,154 creating build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,156 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,161 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,166 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,173 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,179 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,186 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,193 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,201 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,207 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,213 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,218 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,224 copying build/lib.linux-armv7l-3.5/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2020-12-13T18:35:37,231 creating build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,234 copying build/lib.linux-armv7l-3.5/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,245 copying build/lib.linux-armv7l-3.5/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,252 copying build/lib.linux-armv7l-3.5/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,259 copying build/lib.linux-armv7l-3.5/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,266 copying build/lib.linux-armv7l-3.5/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,272 copying build/lib.linux-armv7l-3.5/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,276 copying build/lib.linux-armv7l-3.5/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,282 copying build/lib.linux-armv7l-3.5/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,290 copying build/lib.linux-armv7l-3.5/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,295 copying build/lib.linux-armv7l-3.5/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2020-12-13T18:35:37,301 creating build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,303 copying build/lib.linux-armv7l-3.5/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,311 copying build/lib.linux-armv7l-3.5/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,318 copying build/lib.linux-armv7l-3.5/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,325 copying build/lib.linux-armv7l-3.5/jcvi/utils/brewer2mpl.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,334 creating build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,337 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,343 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,349 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,357 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,363 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,372 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,387 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,395 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,403 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,412 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,416 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,423 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,431 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/colorbrewer_all_schemes.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,447 copying build/lib.linux-armv7l-3.5/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2020-12-13T18:35:37,454 copying build/lib.linux-armv7l-3.5/jcvi/utils/natsort.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,461 copying build/lib.linux-armv7l-3.5/jcvi/utils/counter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,468 copying build/lib.linux-armv7l-3.5/jcvi/utils/iter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,475 copying build/lib.linux-armv7l-3.5/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,484 copying build/lib.linux-armv7l-3.5/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,490 copying build/lib.linux-armv7l-3.5/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,498 copying build/lib.linux-armv7l-3.5/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,505 copying build/lib.linux-armv7l-3.5/jcvi/utils/progressbar.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,514 copying build/lib.linux-armv7l-3.5/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,518 copying build/lib.linux-armv7l-3.5/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,527 copying build/lib.linux-armv7l-3.5/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,534 copying build/lib.linux-armv7l-3.5/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,540 copying build/lib.linux-armv7l-3.5/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2020-12-13T18:35:37,548 creating build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,550 copying build/lib.linux-armv7l-3.5/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,558 copying build/lib.linux-armv7l-3.5/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,564 copying build/lib.linux-armv7l-3.5/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,573 copying build/lib.linux-armv7l-3.5/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,580 copying build/lib.linux-armv7l-3.5/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,587 copying build/lib.linux-armv7l-3.5/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,595 copying build/lib.linux-armv7l-3.5/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,603 copying build/lib.linux-armv7l-3.5/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,612 copying build/lib.linux-armv7l-3.5/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,620 copying build/lib.linux-armv7l-3.5/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,629 copying build/lib.linux-armv7l-3.5/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,635 copying build/lib.linux-armv7l-3.5/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,642 copying build/lib.linux-armv7l-3.5/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,648 copying build/lib.linux-armv7l-3.5/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,654 copying build/lib.linux-armv7l-3.5/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,661 copying build/lib.linux-armv7l-3.5/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,668 copying build/lib.linux-armv7l-3.5/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,673 copying build/lib.linux-armv7l-3.5/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,681 copying build/lib.linux-armv7l-3.5/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,689 copying build/lib.linux-armv7l-3.5/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,695 copying build/lib.linux-armv7l-3.5/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,703 copying build/lib.linux-armv7l-3.5/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,711 copying build/lib.linux-armv7l-3.5/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2020-12-13T18:35:37,716 copying build/lib.linux-armv7l-3.5/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi 2020-12-13T18:35:37,725 creating build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,727 copying build/lib.linux-armv7l-3.5/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,735 copying build/lib.linux-armv7l-3.5/jcvi/assembly/pbjelly.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,742 copying build/lib.linux-armv7l-3.5/jcvi/assembly/amos.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,748 copying build/lib.linux-armv7l-3.5/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,756 copying build/lib.linux-armv7l-3.5/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,764 copying build/lib.linux-armv7l-3.5/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,776 copying build/lib.linux-armv7l-3.5/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,781 copying build/lib.linux-armv7l-3.5/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,789 copying build/lib.linux-armv7l-3.5/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,793 copying build/lib.linux-armv7l-3.5/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,800 copying build/lib.linux-armv7l-3.5/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,806 copying build/lib.linux-armv7l-3.5/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,815 copying build/lib.linux-armv7l-3.5/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,823 copying build/lib.linux-armv7l-3.5/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,830 copying build/lib.linux-armv7l-3.5/jcvi/assembly/unitig.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,837 copying build/lib.linux-armv7l-3.5/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,845 copying build/lib.linux-armv7l-3.5/jcvi/assembly/sspace.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,852 copying build/lib.linux-armv7l-3.5/jcvi/assembly/chic.cpython-35m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,878 copying build/lib.linux-armv7l-3.5/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,886 copying build/lib.linux-armv7l-3.5/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,893 copying build/lib.linux-armv7l-3.5/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,897 copying build/lib.linux-armv7l-3.5/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,906 copying build/lib.linux-armv7l-3.5/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,910 copying build/lib.linux-armv7l-3.5/jcvi/assembly/meraculous.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,915 copying build/lib.linux-armv7l-3.5/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,921 copying build/lib.linux-armv7l-3.5/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,931 copying build/lib.linux-armv7l-3.5/jcvi/assembly/bambus.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,936 copying build/lib.linux-armv7l-3.5/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,942 copying build/lib.linux-armv7l-3.5/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2020-12-13T18:35:37,956 creating build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:37,959 copying build/lib.linux-armv7l-3.5/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:37,965 copying build/lib.linux-armv7l-3.5/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:37,978 copying build/lib.linux-armv7l-3.5/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:37,986 copying build/lib.linux-armv7l-3.5/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:37,992 copying build/lib.linux-armv7l-3.5/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,001 copying build/lib.linux-armv7l-3.5/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,008 copying build/lib.linux-armv7l-3.5/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,016 copying build/lib.linux-armv7l-3.5/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,023 copying build/lib.linux-armv7l-3.5/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,028 copying build/lib.linux-armv7l-3.5/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,035 copying build/lib.linux-armv7l-3.5/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,041 copying build/lib.linux-armv7l-3.5/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,049 copying build/lib.linux-armv7l-3.5/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,054 copying build/lib.linux-armv7l-3.5/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,062 copying build/lib.linux-armv7l-3.5/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,066 copying build/lib.linux-armv7l-3.5/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,073 copying build/lib.linux-armv7l-3.5/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2020-12-13T18:35:38,079 running install_egg_info 2020-12-13T18:35:38,109 Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.0.14-py3.5.egg-info 2020-12-13T18:35:38,150 running install_scripts 2020-12-13T18:35:38,319 creating build/bdist.linux-armv7l/wheel/jcvi-1.0.14.dist-info/WHEEL 2020-12-13T18:35:40,643 Building wheel for jcvi (setup.py): finished with status 'done' 2020-12-13T18:35:40,668 Created wheel for jcvi: filename=jcvi-1.0.14-cp35-cp35m-linux_armv7l.whl size=1177869 sha256=86004012f9381f25659415bb113aaa882550fa558b0daae7f7c501e187590aeb 2020-12-13T18:35:40,669 Stored in directory: /tmp/pip-ephem-wheel-cache-s41ejdl8/wheels/4e/ba/4f/73261bf44b030c96f046f022f66e27bf908be7c3c76db88022 2020-12-13T18:35:40,673 Successfully built jcvi 2020-12-13T18:35:40,885 Removed build tracker: '/tmp/pip-req-tracker-mbei3nev'