2020-12-15T18:57:40,573 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-12-15T18:57:41,318 Created temporary directory: /tmp/pip-ephem-wheel-cache-g8a5wqgq
2020-12-15T18:57:41,323 Created temporary directory: /tmp/pip-req-tracker-4szb55dg
2020-12-15T18:57:41,324 Initialized build tracking at /tmp/pip-req-tracker-4szb55dg
2020-12-15T18:57:41,324 Created build tracker: /tmp/pip-req-tracker-4szb55dg
2020-12-15T18:57:41,324 Entered build tracker: /tmp/pip-req-tracker-4szb55dg
2020-12-15T18:57:41,326 Created temporary directory: /tmp/pip-wheel-jca8h_mm
2020-12-15T18:57:41,346 1 location(s) to search for versions of rcsb-utils-chem:
2020-12-15T18:57:41,346 * https://pypi.org/simple/rcsb-utils-chem/
2020-12-15T18:57:41,347 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/
2020-12-15T18:57:41,349 Getting page https://pypi.org/simple/rcsb-utils-chem/
2020-12-15T18:57:41,354 Found index url https://pypi.org/simple
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2020-12-15T18:57:42,086   Found link https://files.pythonhosted.org/packages/23/70/31a548e2597ba4673b3175b995e181b623e4c747e37c17df2ca582254f55/rcsb.utils.chem-0.39.tar.gz#sha256=3dc0a2b82a1f87025a5ade1c79734ec98a51edd9c33dfeaac7e9bd53050c8887 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.39
2020-12-15T18:57:42,088   Found link https://files.pythonhosted.org/packages/16/1d/3890ea594852c3e66b9477c5f63add9d5581117f98a32c05ee3cd9e66f86/rcsb.utils.chem-0.40-py2.py3-none-any.whl#sha256=18e628af1e06a49c78f2dc312c9e3609ef21667559f6208788ae735952ebbfe5 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.40
2020-12-15T18:57:42,088   Found link https://files.pythonhosted.org/packages/ae/6e/b68046b1cc8f0f7c3f462d2591ec63061e8fb6cd17ab41bab3d60661b792/rcsb.utils.chem-0.40.tar.gz#sha256=dfb8d44085326ad310fb773c776317420b592bf63a8b449381bf79293ff0479b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.40
2020-12-15T18:57:42,090   Found link https://files.pythonhosted.org/packages/32/55/ef2b128f8fb60a0b8ca1c7c8ee2ef5925b52664e8a2eb04271c26f45b4be/rcsb.utils.chem-0.41-py2.py3-none-any.whl#sha256=17437217dd8bbabf4ed399a27a647a0cd53405037966e0e4322ac90994abf505 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2020-12-15T18:57:42,091   Found link https://files.pythonhosted.org/packages/66/e5/53afaa02860c8eff39ff2c8931ced37f4ff2c3f53ec2e39d6dde071bdeb6/rcsb.utils.chem-0.41.tar.gz#sha256=af8a785c4b421d96cc12558add6109fbf1d4214c8b3973cbe66e9f027ca962c2 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2020-12-15T18:57:42,091   Found link https://files.pythonhosted.org/packages/48/b4/e4302c54cb810233dc0fd8b98be5e0fc89e5fc8b6a7f3bcdd12897efacf1/rcsb.utils.chem-0.42.tar.gz#sha256=f4d0f409dff8510e5193127c0da4882443860ee4e4084ac9a5ecc6ecdf2d9e74 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.42
2020-12-15T18:57:42,092   Found link https://files.pythonhosted.org/packages/cc/17/dc085272edf1a807b80df64aa51a233b41305b863cf8de95e7b339c45d86/rcsb.utils.chem-0.43.tar.gz#sha256=7a529bde69e6dfaa1951bd9fb185d8cae922668c1c16f9dcbb7f794df2c0a051 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.43
2020-12-15T18:57:42,093   Found link https://files.pythonhosted.org/packages/d0/0c/25539acbdf220d74a65ee9aaffb83f8a4c0749ba894816cb95efc6f993e6/rcsb.utils.chem-0.45.tar.gz#sha256=5965c277172093334642bb339cbdcfeabf97229d9e04600698b15cdca2e0490b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.45
2020-12-15T18:57:42,094   Found link https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.46
2020-12-15T18:57:42,122 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates
2020-12-15T18:57:42,125 Using version 0.46 (newest of versions: 0.46)
2020-12-15T18:57:42,134 Collecting rcsb-utils-chem==0.46
2020-12-15T18:57:42,139   Created temporary directory: /tmp/pip-unpack-mej8b3_1
2020-12-15T18:57:42,387   Downloading rcsb.utils.chem-0.46.tar.gz (65 kB)
2020-12-15T18:57:42,732   Added rcsb-utils-chem==0.46 from https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72 to build tracker '/tmp/pip-req-tracker-4szb55dg'
2020-12-15T18:57:42,735     Running setup.py (path:/tmp/pip-wheel-jca8h_mm/rcsb-utils-chem/setup.py) egg_info for package rcsb-utils-chem
2020-12-15T18:57:42,738     Created temporary directory: /tmp/pip-pip-egg-info-9x8vskqq
2020-12-15T18:57:42,739     Running command python setup.py egg_info
2020-12-15T18:57:45,231     running egg_info
2020-12-15T18:57:45,237     creating /tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info
2020-12-15T18:57:45,240     writing requirements to /tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/requires.txt
2020-12-15T18:57:45,243     writing top-level names to /tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/top_level.txt
2020-12-15T18:57:45,245     writing entry points to /tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/entry_points.txt
2020-12-15T18:57:45,247     writing dependency_links to /tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/dependency_links.txt
2020-12-15T18:57:45,251     writing /tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/PKG-INFO
2020-12-15T18:57:45,258     writing manifest file '/tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-15T18:57:45,638     reading manifest file '/tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-15T18:57:45,641     reading manifest template 'MANIFEST.in'
2020-12-15T18:57:45,650     writing manifest file '/tmp/pip-pip-egg-info-9x8vskqq/rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-15T18:57:45,791   Source in /tmp/pip-wheel-jca8h_mm/rcsb-utils-chem has version 0.46, which satisfies requirement rcsb-utils-chem==0.46 from https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72
2020-12-15T18:57:45,793   Removed rcsb-utils-chem==0.46 from https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72 from build tracker '/tmp/pip-req-tracker-4szb55dg'
2020-12-15T18:57:45,797 Building wheels for collected packages: rcsb-utils-chem
2020-12-15T18:57:45,805   Created temporary directory: /tmp/pip-wheel-qiiz0xdo
2020-12-15T18:57:45,806   Building wheel for rcsb-utils-chem (setup.py): started
2020-12-15T18:57:45,807   Destination directory: /tmp/pip-wheel-qiiz0xdo
2020-12-15T18:57:45,808   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-jca8h_mm/rcsb-utils-chem/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-jca8h_mm/rcsb-utils-chem/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-qiiz0xdo
2020-12-15T18:57:48,258   running bdist_wheel
2020-12-15T18:57:48,275   running build
2020-12-15T18:57:48,276   running build_py
2020-12-15T18:57:48,614   creating build
2020-12-15T18:57:48,615   creating build/lib
2020-12-15T18:57:48,617   creating build/lib/rcsb
2020-12-15T18:57:48,619   copying rcsb/__init__.py -> build/lib/rcsb
2020-12-15T18:57:48,625   creating build/lib/rcsb/utils
2020-12-15T18:57:48,627   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-12-15T18:57:48,635   creating build/lib/rcsb/utils/chem
2020-12-15T18:57:48,638   copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,646   copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,656   copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,661   copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,666   copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,675   copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,681   copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,689   copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,696   copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,712   copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,719   copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,724   copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,732   copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,739   copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,747   copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,755   copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,763   copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,770   copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,777   copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,785   copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,794   copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,802   copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,809   copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,816   copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,822   copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem
2020-12-15T18:57:48,857   installing to build/bdist.linux-armv7l/wheel
2020-12-15T18:57:48,858   running install
2020-12-15T18:57:48,860   running install_lib
2020-12-15T18:57:48,868   creating build/bdist.linux-armv7l
2020-12-15T18:57:48,869   creating build/bdist.linux-armv7l/wheel
2020-12-15T18:57:48,873   creating build/bdist.linux-armv7l/wheel/rcsb
2020-12-15T18:57:48,876   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-15T18:57:48,882   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,885   copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,893   copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,903   copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,909   copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,915   copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,926   copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,932   copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,940   copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,946   copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,962   copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,969   copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,975   copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,983   copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,989   copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:48,997   copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,004   copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,012   copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,019   copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,026   copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,033   copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,042   copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,049   copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,057   copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,063   copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,069   copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-15T18:57:49,078   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-15T18:57:49,084   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-12-15T18:57:49,089   running install_egg_info
2020-12-15T18:57:49,140   running egg_info
2020-12-15T18:57:49,143   writing entry points to rcsb.utils.chem.egg-info/entry_points.txt
2020-12-15T18:57:49,145   writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt
2020-12-15T18:57:49,148   writing top-level names to rcsb.utils.chem.egg-info/top_level.txt
2020-12-15T18:57:49,150   writing requirements to rcsb.utils.chem.egg-info/requires.txt
2020-12-15T18:57:49,153   writing rcsb.utils.chem.egg-info/PKG-INFO
2020-12-15T18:57:49,175   reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-15T18:57:49,184   reading manifest template 'MANIFEST.in'
2020-12-15T18:57:49,194   writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-15T18:57:49,198   Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.46-py3.5.egg-info
2020-12-15T18:57:49,233   running install_scripts
2020-12-15T18:57:49,436   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.46.dist-info/WHEEL
2020-12-15T18:57:49,806   Building wheel for rcsb-utils-chem (setup.py): finished with status 'done'
2020-12-15T18:57:49,812   Created wheel for rcsb-utils-chem: filename=rcsb.utils.chem-0.46-py2.py3-none-any.whl size=82878 sha256=fa7717c3d981599f41f09bb7609962aba3bc3d0bc1c810dd98b39225403cbe88
2020-12-15T18:57:49,813   Stored in directory: /tmp/pip-ephem-wheel-cache-g8a5wqgq/wheels/b1/76/2c/c1a7ab9d6c614c9927de948de6cf74c98a1afa27858e1e63f5
2020-12-15T18:57:49,817 Successfully built rcsb-utils-chem
2020-12-15T18:57:49,837 Removed build tracker: '/tmp/pip-req-tracker-4szb55dg'