2020-12-18T15:52:45,409 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2020-12-18T15:52:46,113 Created temporary directory: /tmp/pip-ephem-wheel-cache-ilrt7mpl
2020-12-18T15:52:46,117 Created temporary directory: /tmp/pip-req-tracker-4qq5ltc5
2020-12-18T15:52:46,118 Initialized build tracking at /tmp/pip-req-tracker-4qq5ltc5
2020-12-18T15:52:46,119 Created build tracker: /tmp/pip-req-tracker-4qq5ltc5
2020-12-18T15:52:46,119 Entered build tracker: /tmp/pip-req-tracker-4qq5ltc5
2020-12-18T15:52:46,121 Created temporary directory: /tmp/pip-wheel-yf5dlr7i
2020-12-18T15:52:46,142 1 location(s) to search for versions of rcsb-utils-chem:
2020-12-18T15:52:46,142 * https://pypi.org/simple/rcsb-utils-chem/
2020-12-18T15:52:46,142 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/
2020-12-18T15:52:46,145 Getting page https://pypi.org/simple/rcsb-utils-chem/
2020-12-18T15:52:46,149 Found index url https://pypi.org/simple
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2020-12-18T15:52:46,893   Found link https://files.pythonhosted.org/packages/23/70/31a548e2597ba4673b3175b995e181b623e4c747e37c17df2ca582254f55/rcsb.utils.chem-0.39.tar.gz#sha256=3dc0a2b82a1f87025a5ade1c79734ec98a51edd9c33dfeaac7e9bd53050c8887 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.39
2020-12-18T15:52:46,894   Found link https://files.pythonhosted.org/packages/16/1d/3890ea594852c3e66b9477c5f63add9d5581117f98a32c05ee3cd9e66f86/rcsb.utils.chem-0.40-py2.py3-none-any.whl#sha256=18e628af1e06a49c78f2dc312c9e3609ef21667559f6208788ae735952ebbfe5 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.40
2020-12-18T15:52:46,895   Found link https://files.pythonhosted.org/packages/ae/6e/b68046b1cc8f0f7c3f462d2591ec63061e8fb6cd17ab41bab3d60661b792/rcsb.utils.chem-0.40.tar.gz#sha256=dfb8d44085326ad310fb773c776317420b592bf63a8b449381bf79293ff0479b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.40
2020-12-18T15:52:46,896   Found link https://files.pythonhosted.org/packages/32/55/ef2b128f8fb60a0b8ca1c7c8ee2ef5925b52664e8a2eb04271c26f45b4be/rcsb.utils.chem-0.41-py2.py3-none-any.whl#sha256=17437217dd8bbabf4ed399a27a647a0cd53405037966e0e4322ac90994abf505 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2020-12-18T15:52:46,897   Found link https://files.pythonhosted.org/packages/66/e5/53afaa02860c8eff39ff2c8931ced37f4ff2c3f53ec2e39d6dde071bdeb6/rcsb.utils.chem-0.41.tar.gz#sha256=af8a785c4b421d96cc12558add6109fbf1d4214c8b3973cbe66e9f027ca962c2 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2020-12-18T15:52:46,898   Found link https://files.pythonhosted.org/packages/48/b4/e4302c54cb810233dc0fd8b98be5e0fc89e5fc8b6a7f3bcdd12897efacf1/rcsb.utils.chem-0.42.tar.gz#sha256=f4d0f409dff8510e5193127c0da4882443860ee4e4084ac9a5ecc6ecdf2d9e74 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.42
2020-12-18T15:52:46,899   Found link https://files.pythonhosted.org/packages/cc/17/dc085272edf1a807b80df64aa51a233b41305b863cf8de95e7b339c45d86/rcsb.utils.chem-0.43.tar.gz#sha256=7a529bde69e6dfaa1951bd9fb185d8cae922668c1c16f9dcbb7f794df2c0a051 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.43
2020-12-18T15:52:46,900   Found link https://files.pythonhosted.org/packages/d0/0c/25539acbdf220d74a65ee9aaffb83f8a4c0749ba894816cb95efc6f993e6/rcsb.utils.chem-0.45.tar.gz#sha256=5965c277172093334642bb339cbdcfeabf97229d9e04600698b15cdca2e0490b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.45
2020-12-18T15:52:46,901   Found link https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.46
2020-12-18T15:52:46,902   Found link https://files.pythonhosted.org/packages/ea/ec/b15f27f9bade5197117a66a8ca4e3ccddbe1d75329b455b247e0ebeb48ff/rcsb.utils.chem-0.47.tar.gz#sha256=38a34f5e5e7fc51d3e2c29282168828923966348205311d7964a19dc5020b4b7 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.47
2020-12-18T15:52:46,902   Found link https://files.pythonhosted.org/packages/bd/f2/5d8c5d0ca3a095766c61bc5c4169602742c471eccc53604d982703d594ef/rcsb.utils.chem-0.48.tar.gz#sha256=02aaab58565423a96fa75152bea9969a1014a9c882583f870c4860f1b9bbe846 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.48
2020-12-18T15:52:46,931 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates
2020-12-18T15:52:46,934 Using version 0.48 (newest of versions: 0.48)
2020-12-18T15:52:46,944 Collecting rcsb-utils-chem==0.48
2020-12-18T15:52:46,949   Created temporary directory: /tmp/pip-unpack-5aj4cni2
2020-12-18T15:52:47,204   Downloading rcsb.utils.chem-0.48.tar.gz (68 kB)
2020-12-18T15:52:47,524   Added rcsb-utils-chem==0.48 from https://files.pythonhosted.org/packages/bd/f2/5d8c5d0ca3a095766c61bc5c4169602742c471eccc53604d982703d594ef/rcsb.utils.chem-0.48.tar.gz#sha256=02aaab58565423a96fa75152bea9969a1014a9c882583f870c4860f1b9bbe846 to build tracker '/tmp/pip-req-tracker-4qq5ltc5'
2020-12-18T15:52:47,526     Running setup.py (path:/tmp/pip-wheel-yf5dlr7i/rcsb-utils-chem/setup.py) egg_info for package rcsb-utils-chem
2020-12-18T15:52:47,528     Created temporary directory: /tmp/pip-pip-egg-info-4yurjydd
2020-12-18T15:52:47,529     Running command python setup.py egg_info
2020-12-18T15:52:49,778     running egg_info
2020-12-18T15:52:49,785     creating /tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info
2020-12-18T15:52:49,789     writing requirements to /tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/requires.txt
2020-12-18T15:52:49,791     writing dependency_links to /tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/dependency_links.txt
2020-12-18T15:52:49,793     writing entry points to /tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/entry_points.txt
2020-12-18T15:52:49,796     writing top-level names to /tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/top_level.txt
2020-12-18T15:52:49,799     writing /tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/PKG-INFO
2020-12-18T15:52:49,806     writing manifest file '/tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-18T15:52:50,175     reading manifest file '/tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-18T15:52:50,179     reading manifest template 'MANIFEST.in'
2020-12-18T15:52:50,188     writing manifest file '/tmp/pip-pip-egg-info-4yurjydd/rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-18T15:52:50,320   Source in /tmp/pip-wheel-yf5dlr7i/rcsb-utils-chem has version 0.48, which satisfies requirement rcsb-utils-chem==0.48 from https://files.pythonhosted.org/packages/bd/f2/5d8c5d0ca3a095766c61bc5c4169602742c471eccc53604d982703d594ef/rcsb.utils.chem-0.48.tar.gz#sha256=02aaab58565423a96fa75152bea9969a1014a9c882583f870c4860f1b9bbe846
2020-12-18T15:52:50,322   Removed rcsb-utils-chem==0.48 from https://files.pythonhosted.org/packages/bd/f2/5d8c5d0ca3a095766c61bc5c4169602742c471eccc53604d982703d594ef/rcsb.utils.chem-0.48.tar.gz#sha256=02aaab58565423a96fa75152bea9969a1014a9c882583f870c4860f1b9bbe846 from build tracker '/tmp/pip-req-tracker-4qq5ltc5'
2020-12-18T15:52:50,326 Building wheels for collected packages: rcsb-utils-chem
2020-12-18T15:52:50,335   Created temporary directory: /tmp/pip-wheel-dj2gs0sr
2020-12-18T15:52:50,336   Building wheel for rcsb-utils-chem (setup.py): started
2020-12-18T15:52:50,336   Destination directory: /tmp/pip-wheel-dj2gs0sr
2020-12-18T15:52:50,337   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-yf5dlr7i/rcsb-utils-chem/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-yf5dlr7i/rcsb-utils-chem/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dj2gs0sr
2020-12-18T15:52:52,599   running bdist_wheel
2020-12-18T15:52:52,615   running build
2020-12-18T15:52:52,616   running build_py
2020-12-18T15:52:52,969   creating build
2020-12-18T15:52:52,970   creating build/lib
2020-12-18T15:52:52,972   creating build/lib/rcsb
2020-12-18T15:52:52,974   copying rcsb/__init__.py -> build/lib/rcsb
2020-12-18T15:52:52,980   creating build/lib/rcsb/utils
2020-12-18T15:52:52,982   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2020-12-18T15:52:52,990   creating build/lib/rcsb/utils/chem
2020-12-18T15:52:52,992   copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:52,999   copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,008   copying rcsb/utils/chem/OeMcssSearchUtils.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,015   copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,021   copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,030   copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,037   copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,044   copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,052   copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,059   copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,065   copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,072   copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,078   copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,085   copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,093   copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,108   copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,115   copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,121   copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,125   copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,131   copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,141   copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,146   copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,154   copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,160   copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,166   copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,172   copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem
2020-12-18T15:52:53,209   installing to build/bdist.linux-armv7l/wheel
2020-12-18T15:52:53,210   running install
2020-12-18T15:52:53,212   running install_lib
2020-12-18T15:52:53,220   creating build/bdist.linux-armv7l
2020-12-18T15:52:53,221   creating build/bdist.linux-armv7l/wheel
2020-12-18T15:52:53,224   creating build/bdist.linux-armv7l/wheel/rcsb
2020-12-18T15:52:53,227   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2020-12-18T15:52:53,232   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-18T15:52:53,237   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,240   copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,250   copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,261   copying build/lib/rcsb/utils/chem/OeMcssSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,266   copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,271   copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,279   copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,285   copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,293   copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,301   copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,307   copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,311   copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,316   copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,321   copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,329   copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,339   copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,353   copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,358   copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,365   copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,372   copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,379   copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,389   copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,393   copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,399   copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,404   copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,412   copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,419   copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2020-12-18T15:52:53,429   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2020-12-18T15:52:53,434   running install_egg_info
2020-12-18T15:52:53,481   running egg_info
2020-12-18T15:52:53,482   writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt
2020-12-18T15:52:53,485   writing requirements to rcsb.utils.chem.egg-info/requires.txt
2020-12-18T15:52:53,487   writing entry points to rcsb.utils.chem.egg-info/entry_points.txt
2020-12-18T15:52:53,490   writing top-level names to rcsb.utils.chem.egg-info/top_level.txt
2020-12-18T15:52:53,492   writing rcsb.utils.chem.egg-info/PKG-INFO
2020-12-18T15:52:53,508   reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-18T15:52:53,513   reading manifest template 'MANIFEST.in'
2020-12-18T15:52:53,523   writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2020-12-18T15:52:53,526   Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.48-py3.5.egg-info
2020-12-18T15:52:53,563   running install_scripts
2020-12-18T15:52:53,792   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.48.dist-info/WHEEL
2020-12-18T15:52:54,175   Building wheel for rcsb-utils-chem (setup.py): finished with status 'done'
2020-12-18T15:52:54,181   Created wheel for rcsb-utils-chem: filename=rcsb.utils.chem-0.48-py2.py3-none-any.whl size=86032 sha256=f3ef4d7d901a0e4796e7452302be182c9fcb8bf81799fef3c2249252f1b33542
2020-12-18T15:52:54,182   Stored in directory: /tmp/pip-ephem-wheel-cache-ilrt7mpl/wheels/af/ae/25/b4097d9d4176f103f1c4c211aee7008956724ce03f253665f1
2020-12-18T15:52:54,186 Successfully built rcsb-utils-chem
2020-12-18T15:52:54,208 Removed build tracker: '/tmp/pip-req-tracker-4qq5ltc5'