2021-01-09T17:48:02,472 Created temporary directory: /tmp/pip-ephem-wheel-cache-o6uf7wvc 2021-01-09T17:48:02,475 Created temporary directory: /tmp/pip-req-tracker-voepfz7d 2021-01-09T17:48:02,475 Initialized build tracking at /tmp/pip-req-tracker-voepfz7d 2021-01-09T17:48:02,476 Created build tracker: /tmp/pip-req-tracker-voepfz7d 2021-01-09T17:48:02,476 Entered build tracker: /tmp/pip-req-tracker-voepfz7d 2021-01-09T17:48:02,476 Created temporary directory: /tmp/pip-wheel-66g6j_k0 2021-01-09T17:48:02,486 1 location(s) to search for versions of jcvi: 2021-01-09T17:48:02,486 * https://pypi.org/simple/jcvi/ 2021-01-09T17:48:02,486 Fetching project page and analyzing links: https://pypi.org/simple/jcvi/ 2021-01-09T17:48:02,487 Getting page https://pypi.org/simple/jcvi/ 2021-01-09T17:48:02,488 Found index url https://pypi.org/simple 2021-01-09T17:48:02,865 Found link 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https://files.pythonhosted.org/packages/57/a2/c4366a77f1ffacfe04a0b338c18a675d878728e89d4ef2b26ae5c15f00d3/jcvi-1.0.5.tar.gz#sha256=5dd0515541548cee07a0cbb26bec70cdea8d502fc365971c420f3b919ef3074b (from https://pypi.org/simple/jcvi/), version: 1.0.5 2021-01-09T17:48:02,876 Found link https://files.pythonhosted.org/packages/95/99/7dbf1fe691d207f09fb898775ee72afb5174253d09bf9a37978860d00b5a/jcvi-1.0.6.tar.gz#sha256=49565d9dfe7519ee58a365a2507162f1483943370a89dfdc357650bbc3540c25 (from https://pypi.org/simple/jcvi/), version: 1.0.6 2021-01-09T17:48:02,877 Found link https://files.pythonhosted.org/packages/b9/81/99c5b7456aa490483fe208753894196113656e9cc69af47b39d42bf218c9/jcvi-1.0.7.tar.gz#sha256=6387cb5ae5e8e566117cdc043f87894a0108066b7ce2ce640a885537943eb153 (from https://pypi.org/simple/jcvi/), version: 1.0.7 2021-01-09T17:48:02,877 Found link 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https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14 2021-01-09T17:48:02,879 Found link https://files.pythonhosted.org/packages/74/c8/e384f7963f349e571795468fbabf451aa903825736fde6e9d3474c238463/jcvi-1.1.1.tar.gz#sha256=ad22b0efeeb8d9fa3e9a66871b796f6fc2072e4cb48491f5b18602e585b468bb (from https://pypi.org/simple/jcvi/), version: 1.1.1 2021-01-09T17:48:02,879 Found link https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 (from https://pypi.org/simple/jcvi/), version: 1.1.2 2021-01-09T17:48:02,891 Given no hashes to check 1 links for project 'jcvi': discarding no candidates 2021-01-09T17:48:02,892 Using version 1.1.2 (newest of versions: 1.1.2) 2021-01-09T17:48:02,896 Collecting jcvi==1.1.2 2021-01-09T17:48:02,898 Created temporary directory: /tmp/pip-unpack-0qqz2v9f 2021-01-09T17:48:02,946 Downloading jcvi-1.1.2.tar.gz (823 kB) 2021-01-09T17:48:03,847 Added jcvi==1.1.2 from https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 to build tracker '/tmp/pip-req-tracker-voepfz7d' 2021-01-09T17:48:03,848 Running setup.py (path:/tmp/pip-wheel-66g6j_k0/jcvi/setup.py) egg_info for package jcvi 2021-01-09T17:48:03,849 Created temporary directory: /tmp/pip-pip-egg-info-6xhzdcai 2021-01-09T17:48:03,850 Running command python setup.py egg_info 2021-01-09T17:48:05,879 running egg_info 2021-01-09T17:48:05,882 creating /tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info 2021-01-09T17:48:05,883 writing /tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info/PKG-INFO 2021-01-09T17:48:05,890 writing dependency_links to /tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info/dependency_links.txt 2021-01-09T17:48:05,893 writing requirements to /tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info/requires.txt 2021-01-09T17:48:05,895 writing top-level names to /tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info/top_level.txt 2021-01-09T17:48:05,898 writing manifest file '/tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info/SOURCES.txt' 2021-01-09T17:48:05,927 reading manifest file '/tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info/SOURCES.txt' 2021-01-09T17:48:05,930 reading manifest template 'MANIFEST.in' 2021-01-09T17:48:05,943 writing manifest file '/tmp/pip-pip-egg-info-6xhzdcai/jcvi.egg-info/SOURCES.txt' 2021-01-09T17:48:05,946 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1.1.2' to '1.1.2' 2021-01-09T17:48:05,946 warnings.warn(tmpl.format(**locals())) 2021-01-09T17:48:06,040 Source in /tmp/pip-wheel-66g6j_k0/jcvi has version 1.1.2, which satisfies requirement jcvi==1.1.2 from https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 2021-01-09T17:48:06,041 Removed jcvi==1.1.2 from https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 from build tracker '/tmp/pip-req-tracker-voepfz7d' 2021-01-09T17:48:06,044 Building wheels for collected packages: jcvi 2021-01-09T17:48:06,048 Created temporary directory: /tmp/pip-wheel-rdeod1fl 2021-01-09T17:48:06,048 Building wheel for jcvi (setup.py): started 2021-01-09T17:48:06,049 Destination directory: /tmp/pip-wheel-rdeod1fl 2021-01-09T17:48:06,049 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-66g6j_k0/jcvi/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-66g6j_k0/jcvi/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-rdeod1fl 2021-01-09T17:48:07,599 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1.1.2' to '1.1.2' 2021-01-09T17:48:07,600 warnings.warn(tmpl.format(**locals())) 2021-01-09T17:48:07,659 running bdist_wheel 2021-01-09T17:48:07,665 running build 2021-01-09T17:48:07,665 running build_py 2021-01-09T17:48:07,671 creating build 2021-01-09T17:48:07,672 creating build/lib.linux-armv7l-3.7 2021-01-09T17:48:07,673 creating build/lib.linux-armv7l-3.7/jcvi 2021-01-09T17:48:07,674 copying jcvi/__init__.py -> build/lib.linux-armv7l-3.7/jcvi 2021-01-09T17:48:07,677 copying jcvi/_version.py -> build/lib.linux-armv7l-3.7/jcvi 2021-01-09T17:48:07,681 creating build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,682 copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,687 copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,693 copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,696 copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,698 copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,702 copying jcvi/apps/cap3.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,706 copying jcvi/apps/tesseract.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,709 copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,712 copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,714 copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,717 copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,721 copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,724 copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,727 copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,730 copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,734 copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,737 copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,739 copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,742 copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,744 copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,746 copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,749 copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,751 copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,754 copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,758 copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,761 copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,764 copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-09T17:48:07,768 creating build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,769 copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,772 copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,773 copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,776 copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,779 copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,781 copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,784 copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,788 copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,790 copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,792 copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,795 copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,797 copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-09T17:48:07,801 creating build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,802 copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,805 copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,806 copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,809 copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,811 copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,814 copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,816 copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,819 copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,821 copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,824 copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,826 copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,828 copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,831 copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,836 copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,839 copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,843 copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,846 copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-09T17:48:07,850 creating build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,851 copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,853 copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,855 copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,857 copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,860 copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,863 copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,867 copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,871 copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,875 copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,877 copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,881 copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-09T17:48:07,888 creating build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,889 copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,892 copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,895 copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,898 copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,902 copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,905 copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,909 copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,912 copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,918 copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,921 copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-09T17:48:07,925 creating build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,926 copying jcvi/utils/iter.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,929 copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,931 copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,934 copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,936 copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,939 copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,941 copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,944 copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,948 copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,951 copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,954 copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,958 copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,962 copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-09T17:48:07,966 creating build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,967 copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,970 copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,974 copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,977 copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,981 copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,985 copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,988 copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,991 copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,994 copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:07,997 copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:08,001 copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:08,005 copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-09T17:48:08,010 creating build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,011 copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,018 copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,022 copying jcvi/assembly/unitig.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,025 copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,030 copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,032 copying jcvi/assembly/meraculous.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,035 copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,039 copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,043 copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,054 copying jcvi/assembly/bambus.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,056 copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,059 copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,063 copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,067 copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,071 copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,075 copying jcvi/assembly/sspace.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,080 copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,083 copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,086 copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,088 copying jcvi/assembly/amos.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,090 copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,093 copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,096 copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,099 copying jcvi/assembly/pbjelly.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,102 copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,104 copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,107 copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,111 creating build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,112 copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,115 copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,117 copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,121 copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,123 copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,125 copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,127 copying jcvi/formats/btab.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,130 copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,132 copying jcvi/formats/sbt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,134 copying jcvi/formats/fpc.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,136 copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,139 copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,141 copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,144 copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,148 copying jcvi/formats/posmap.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,150 copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,153 copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,157 copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,159 copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,163 copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,165 copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,167 copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,170 copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,172 copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,175 copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,178 copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,182 copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,185 copying jcvi/formats/ace.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,188 copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,190 copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,195 creating build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,195 copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,199 copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,201 copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,203 copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,206 copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,208 copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,211 copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,214 copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,216 copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,218 copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,221 copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,223 copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,226 copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,228 copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,230 copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,233 copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,235 copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,238 copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,241 copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,243 copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,246 copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,248 copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,250 copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-09T17:48:08,253 creating build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,254 copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,256 running egg_info 2021-01-09T17:48:08,266 writing jcvi.egg-info/PKG-INFO 2021-01-09T17:48:08,269 writing dependency_links to jcvi.egg-info/dependency_links.txt 2021-01-09T17:48:08,271 writing requirements to jcvi.egg-info/requires.txt 2021-01-09T17:48:08,272 writing top-level names to jcvi.egg-info/top_level.txt 2021-01-09T17:48:08,293 reading manifest file 'jcvi.egg-info/SOURCES.txt' 2021-01-09T17:48:08,300 reading manifest template 'MANIFEST.in' 2021-01-09T17:48:08,317 writing manifest file 'jcvi.egg-info/SOURCES.txt' 2021-01-09T17:48:08,325 copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:08,328 copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:08,331 copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,334 copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,339 copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,342 copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,345 copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,349 copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,351 copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,354 copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,357 copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,360 copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,364 copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,367 copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-09T17:48:08,388 UPDATING build/lib.linux-armv7l-3.7/jcvi/_version.py 2021-01-09T17:48:08,390 set build/lib.linux-armv7l-3.7/jcvi/_version.py to 'v1.1.2' 2021-01-09T17:48:08,390 running build_ext 2021-01-09T17:48:08,480 cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c 2021-01-09T17:48:09,134 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-66g6j_k0/jcvi/jcvi/assembly/chic.pyx 2021-01-09T17:48:09,134 tree = Parsing.p_module(s, pxd, full_module_name) 2021-01-09T17:48:10,646 cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c 2021-01-09T17:48:10,652 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-66g6j_k0/jcvi/jcvi/formats/cblast.pyx 2021-01-09T17:48:10,653 tree = Parsing.p_module(s, pxd, full_module_name) 2021-01-09T17:48:11,258 building 'jcvi.assembly.chic' extension 2021-01-09T17:48:11,258 creating build/temp.linux-armv7l-3.7 2021-01-09T17:48:11,259 creating build/temp.linux-armv7l-3.7/jcvi 2021-01-09T17:48:11,259 creating build/temp.linux-armv7l-3.7/jcvi/assembly 2021-01-09T17:48:11,260 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -O3 2021-01-09T17:48:11,737 In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2021-01-09T17:48:11,737 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-01-09T17:48:11,738 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-01-09T17:48:11,738 from jcvi/assembly/chic.c:610: 2021-01-09T17:48:11,738 /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-01-09T17:48:11,738 #warning "Using deprecated NumPy API, disable it with " \ 2021-01-09T17:48:11,739 ^~~~~~~ 2021-01-09T17:48:15,696 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so 2021-01-09T17:48:15,841 building 'jcvi.formats.cblast' extension 2021-01-09T17:48:15,842 creating build/temp.linux-armv7l-3.7/jcvi/formats 2021-01-09T17:48:15,842 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -O3 2021-01-09T17:48:22,928 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so 2021-01-09T17:48:23,089 installing to build/bdist.linux-armv7l/wheel 2021-01-09T17:48:23,090 running install 2021-01-09T17:48:23,091 running install_lib 2021-01-09T17:48:23,096 creating build/bdist.linux-armv7l 2021-01-09T17:48:23,096 creating build/bdist.linux-armv7l/wheel 2021-01-09T17:48:23,099 creating build/bdist.linux-armv7l/wheel/jcvi 2021-01-09T17:48:23,100 copying build/lib.linux-armv7l-3.7/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-01-09T17:48:23,104 creating build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,105 copying build/lib.linux-armv7l-3.7/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,110 copying build/lib.linux-armv7l-3.7/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,115 copying build/lib.linux-armv7l-3.7/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,118 copying build/lib.linux-armv7l-3.7/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,120 copying build/lib.linux-armv7l-3.7/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,123 copying build/lib.linux-armv7l-3.7/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,126 copying build/lib.linux-armv7l-3.7/jcvi/apps/tesseract.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,128 copying build/lib.linux-armv7l-3.7/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,131 copying build/lib.linux-armv7l-3.7/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,133 copying build/lib.linux-armv7l-3.7/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,135 copying build/lib.linux-armv7l-3.7/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,139 copying build/lib.linux-armv7l-3.7/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,142 copying build/lib.linux-armv7l-3.7/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,144 copying build/lib.linux-armv7l-3.7/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,147 copying build/lib.linux-armv7l-3.7/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,151 copying build/lib.linux-armv7l-3.7/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,154 copying build/lib.linux-armv7l-3.7/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,156 copying build/lib.linux-armv7l-3.7/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,159 copying build/lib.linux-armv7l-3.7/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,162 copying build/lib.linux-armv7l-3.7/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,164 copying build/lib.linux-armv7l-3.7/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,167 copying build/lib.linux-armv7l-3.7/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,170 copying build/lib.linux-armv7l-3.7/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,173 copying build/lib.linux-armv7l-3.7/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,176 copying build/lib.linux-armv7l-3.7/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,180 copying build/lib.linux-armv7l-3.7/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,183 copying build/lib.linux-armv7l-3.7/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-09T17:48:23,187 creating build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,188 copying build/lib.linux-armv7l-3.7/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,191 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,193 copying build/lib.linux-armv7l-3.7/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,196 copying build/lib.linux-armv7l-3.7/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,199 copying build/lib.linux-armv7l-3.7/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,202 copying build/lib.linux-armv7l-3.7/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,205 copying build/lib.linux-armv7l-3.7/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,209 copying build/lib.linux-armv7l-3.7/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,212 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,214 copying build/lib.linux-armv7l-3.7/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,217 copying build/lib.linux-armv7l-3.7/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,223 copying build/lib.linux-armv7l-3.7/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-09T17:48:23,227 creating build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,228 copying build/lib.linux-armv7l-3.7/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,233 copying build/lib.linux-armv7l-3.7/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,235 copying build/lib.linux-armv7l-3.7/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,243 copying build/lib.linux-armv7l-3.7/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,243 copying build/lib.linux-armv7l-3.7/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,245 copying build/lib.linux-armv7l-3.7/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,248 copying build/lib.linux-armv7l-3.7/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,251 copying build/lib.linux-armv7l-3.7/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,254 copying build/lib.linux-armv7l-3.7/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,256 copying build/lib.linux-armv7l-3.7/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,259 copying build/lib.linux-armv7l-3.7/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,261 copying build/lib.linux-armv7l-3.7/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,265 copying build/lib.linux-armv7l-3.7/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,269 copying build/lib.linux-armv7l-3.7/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,272 copying build/lib.linux-armv7l-3.7/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,275 copying build/lib.linux-armv7l-3.7/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,278 copying build/lib.linux-armv7l-3.7/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-09T17:48:23,282 creating build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,283 copying build/lib.linux-armv7l-3.7/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,285 copying build/lib.linux-armv7l-3.7/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,289 copying build/lib.linux-armv7l-3.7/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,291 copying build/lib.linux-armv7l-3.7/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,294 copying build/lib.linux-armv7l-3.7/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,297 copying build/lib.linux-armv7l-3.7/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,301 copying build/lib.linux-armv7l-3.7/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,304 copying build/lib.linux-armv7l-3.7/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,306 copying build/lib.linux-armv7l-3.7/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,309 copying build/lib.linux-armv7l-3.7/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,312 copying build/lib.linux-armv7l-3.7/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-09T17:48:23,316 copying build/lib.linux-armv7l-3.7/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-01-09T17:48:23,319 creating build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,321 copying build/lib.linux-armv7l-3.7/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,323 copying build/lib.linux-armv7l-3.7/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,325 copying build/lib.linux-armv7l-3.7/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,328 copying build/lib.linux-armv7l-3.7/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,332 copying build/lib.linux-armv7l-3.7/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,335 copying build/lib.linux-armv7l-3.7/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,337 copying build/lib.linux-armv7l-3.7/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,340 copying build/lib.linux-armv7l-3.7/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,344 copying build/lib.linux-armv7l-3.7/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,346 copying build/lib.linux-armv7l-3.7/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-09T17:48:23,350 creating build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,351 copying build/lib.linux-armv7l-3.7/jcvi/utils/iter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,354 copying build/lib.linux-armv7l-3.7/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,357 creating build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,358 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,360 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,362 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,364 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,366 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,370 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,372 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,377 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,379 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,385 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,387 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,390 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,393 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-09T17:48:23,397 copying build/lib.linux-armv7l-3.7/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,401 copying build/lib.linux-armv7l-3.7/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,404 copying build/lib.linux-armv7l-3.7/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,406 copying build/lib.linux-armv7l-3.7/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,409 copying build/lib.linux-armv7l-3.7/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,412 copying build/lib.linux-armv7l-3.7/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,415 copying build/lib.linux-armv7l-3.7/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,417 copying build/lib.linux-armv7l-3.7/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,420 copying build/lib.linux-armv7l-3.7/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,423 copying build/lib.linux-armv7l-3.7/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,426 copying build/lib.linux-armv7l-3.7/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-09T17:48:23,430 creating build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,431 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,433 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,436 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,440 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,443 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,446 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,449 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,451 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,454 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,456 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,459 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,463 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-09T17:48:23,467 creating build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,468 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,474 copying build/lib.linux-armv7l-3.7/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,477 copying build/lib.linux-armv7l-3.7/jcvi/assembly/unitig.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,480 copying build/lib.linux-armv7l-3.7/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,484 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,486 copying build/lib.linux-armv7l-3.7/jcvi/assembly/meraculous.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,488 copying build/lib.linux-armv7l-3.7/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,492 copying build/lib.linux-armv7l-3.7/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,496 copying build/lib.linux-armv7l-3.7/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,501 copying build/lib.linux-armv7l-3.7/jcvi/assembly/bambus.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,503 copying build/lib.linux-armv7l-3.7/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,506 copying build/lib.linux-armv7l-3.7/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,510 copying build/lib.linux-armv7l-3.7/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,512 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,516 copying build/lib.linux-armv7l-3.7/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,520 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sspace.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,522 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,535 copying build/lib.linux-armv7l-3.7/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,538 copying build/lib.linux-armv7l-3.7/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,541 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,543 copying build/lib.linux-armv7l-3.7/jcvi/assembly/amos.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,545 copying build/lib.linux-armv7l-3.7/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,548 copying build/lib.linux-armv7l-3.7/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,552 copying build/lib.linux-armv7l-3.7/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,554 copying build/lib.linux-armv7l-3.7/jcvi/assembly/pbjelly.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,557 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,560 copying build/lib.linux-armv7l-3.7/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,562 copying build/lib.linux-armv7l-3.7/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,566 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-09T17:48:23,569 creating build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,570 copying build/lib.linux-armv7l-3.7/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,573 copying build/lib.linux-armv7l-3.7/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,576 copying build/lib.linux-armv7l-3.7/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,580 copying build/lib.linux-armv7l-3.7/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,582 copying build/lib.linux-armv7l-3.7/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,584 copying build/lib.linux-armv7l-3.7/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,587 copying build/lib.linux-armv7l-3.7/jcvi/formats/btab.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,590 copying build/lib.linux-armv7l-3.7/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,593 copying build/lib.linux-armv7l-3.7/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,596 copying build/lib.linux-armv7l-3.7/jcvi/formats/fpc.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,598 copying build/lib.linux-armv7l-3.7/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,602 copying build/lib.linux-armv7l-3.7/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,605 copying build/lib.linux-armv7l-3.7/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,609 copying build/lib.linux-armv7l-3.7/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,613 copying build/lib.linux-armv7l-3.7/jcvi/formats/posmap.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,616 copying build/lib.linux-armv7l-3.7/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,620 copying build/lib.linux-armv7l-3.7/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,624 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,640 copying build/lib.linux-armv7l-3.7/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,643 copying build/lib.linux-armv7l-3.7/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,648 copying build/lib.linux-armv7l-3.7/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,650 copying build/lib.linux-armv7l-3.7/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,652 copying build/lib.linux-armv7l-3.7/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,654 copying build/lib.linux-armv7l-3.7/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,656 copying build/lib.linux-armv7l-3.7/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,660 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,663 copying build/lib.linux-armv7l-3.7/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,666 copying build/lib.linux-armv7l-3.7/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,671 copying build/lib.linux-armv7l-3.7/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,674 copying build/lib.linux-armv7l-3.7/jcvi/formats/ace.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,677 copying build/lib.linux-armv7l-3.7/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,680 copying build/lib.linux-armv7l-3.7/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-09T17:48:23,684 creating build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,685 copying build/lib.linux-armv7l-3.7/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,689 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,690 copying build/lib.linux-armv7l-3.7/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,693 copying build/lib.linux-armv7l-3.7/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,696 copying build/lib.linux-armv7l-3.7/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,699 copying build/lib.linux-armv7l-3.7/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,702 copying build/lib.linux-armv7l-3.7/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,708 copying build/lib.linux-armv7l-3.7/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,711 copying build/lib.linux-armv7l-3.7/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,715 copying build/lib.linux-armv7l-3.7/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,718 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,720 copying build/lib.linux-armv7l-3.7/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,723 copying build/lib.linux-armv7l-3.7/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,725 copying build/lib.linux-armv7l-3.7/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,727 copying build/lib.linux-armv7l-3.7/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,730 copying build/lib.linux-armv7l-3.7/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,733 copying build/lib.linux-armv7l-3.7/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,736 copying build/lib.linux-armv7l-3.7/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,739 copying build/lib.linux-armv7l-3.7/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,742 copying build/lib.linux-armv7l-3.7/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,746 copying build/lib.linux-armv7l-3.7/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,748 copying build/lib.linux-armv7l-3.7/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,753 copying build/lib.linux-armv7l-3.7/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-09T17:48:23,754 running install_egg_info 2021-01-09T17:48:23,764 Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.1.2-py3.7.egg-info 2021-01-09T17:48:23,782 running install_scripts 2021-01-09T17:48:23,860 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-01-09T17:48:23,867 creating build/bdist.linux-armv7l/wheel/jcvi-1.1.2.dist-info/WHEEL 2021-01-09T17:48:23,870 creating '/tmp/pip-wheel-rdeod1fl/jcvi-1.1.2-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-01-09T17:48:23,873 adding 'jcvi/__init__.py' 2021-01-09T17:48:23,874 adding 'jcvi/_version.py' 2021-01-09T17:48:23,876 adding 'jcvi/algorithms/__init__.py' 2021-01-09T17:48:23,877 adding 'jcvi/algorithms/__main__.py' 2021-01-09T17:48:23,879 adding 'jcvi/algorithms/ec.py' 2021-01-09T17:48:23,881 adding 'jcvi/algorithms/formula.py' 2021-01-09T17:48:23,884 adding 'jcvi/algorithms/graph.py' 2021-01-09T17:48:23,886 adding 'jcvi/algorithms/lis.py' 2021-01-09T17:48:23,889 adding 'jcvi/algorithms/lpsolve.py' 2021-01-09T17:48:23,891 adding 'jcvi/algorithms/matrix.py' 2021-01-09T17:48:23,893 adding 'jcvi/algorithms/maxsum.py' 2021-01-09T17:48:23,894 adding 'jcvi/algorithms/ml.py' 2021-01-09T17:48:23,896 adding 'jcvi/algorithms/supermap.py' 2021-01-09T17:48:23,898 adding 'jcvi/algorithms/tsp.py' 2021-01-09T17:48:23,900 adding 'jcvi/annotation/__init__.py' 2021-01-09T17:48:23,901 adding 'jcvi/annotation/__main__.py' 2021-01-09T17:48:23,904 adding 'jcvi/annotation/ahrd.py' 2021-01-09T17:48:23,906 adding 'jcvi/annotation/automaton.py' 2021-01-09T17:48:23,908 adding 'jcvi/annotation/depth.py' 2021-01-09T17:48:23,910 adding 'jcvi/annotation/evm.py' 2021-01-09T17:48:23,913 adding 'jcvi/annotation/maker.py' 2021-01-09T17:48:23,916 adding 'jcvi/annotation/pasa.py' 2021-01-09T17:48:23,918 adding 'jcvi/annotation/qc.py' 2021-01-09T17:48:23,925 adding 'jcvi/annotation/reformat.py' 2021-01-09T17:48:23,927 adding 'jcvi/annotation/stats.py' 2021-01-09T17:48:23,929 adding 'jcvi/annotation/train.py' 2021-01-09T17:48:23,932 adding 'jcvi/apps/__init__.py' 2021-01-09T17:48:23,933 adding 'jcvi/apps/__main__.py' 2021-01-09T17:48:23,935 adding 'jcvi/apps/align.py' 2021-01-09T17:48:23,944 adding 'jcvi/apps/base.py' 2021-01-09T17:48:23,947 adding 'jcvi/apps/biomart.py' 2021-01-09T17:48:23,949 adding 'jcvi/apps/blastplus.py' 2021-01-09T17:48:23,951 adding 'jcvi/apps/bowtie.py' 2021-01-09T17:48:23,953 adding 'jcvi/apps/bwa.py' 2021-01-09T17:48:23,955 adding 'jcvi/apps/cap3.py' 2021-01-09T17:48:23,956 adding 'jcvi/apps/cdhit.py' 2021-01-09T17:48:23,958 adding 'jcvi/apps/emboss.py' 2021-01-09T17:48:23,961 adding 'jcvi/apps/fetch.py' 2021-01-09T17:48:23,964 adding 'jcvi/apps/gbsubmit.py' 2021-01-09T17:48:23,966 adding 'jcvi/apps/gmap.py' 2021-01-09T17:48:23,968 adding 'jcvi/apps/grid.py' 2021-01-09T17:48:23,973 adding 'jcvi/apps/ks.py' 2021-01-09T17:48:23,975 adding 'jcvi/apps/lastz.py' 2021-01-09T17:48:23,977 adding 'jcvi/apps/mask.py' 2021-01-09T17:48:23,982 adding 'jcvi/apps/phylo.py' 2021-01-09T17:48:23,983 adding 'jcvi/apps/r.py' 2021-01-09T17:48:23,985 adding 'jcvi/apps/restriction.py' 2021-01-09T17:48:23,986 adding 'jcvi/apps/script.py' 2021-01-09T17:48:23,988 adding 'jcvi/apps/softlink.py' 2021-01-09T17:48:23,989 adding 'jcvi/apps/tesseract.py' 2021-01-09T17:48:23,994 adding 'jcvi/apps/uclust.py' 2021-01-09T17:48:23,996 adding 'jcvi/apps/uniprot.py' 2021-01-09T17:48:23,998 adding 'jcvi/apps/vecscreen.py' 2021-01-09T17:48:24,000 adding 'jcvi/assembly/__init__.py' 2021-01-09T17:48:24,001 adding 'jcvi/assembly/__main__.py' 2021-01-09T17:48:24,011 adding 'jcvi/assembly/allmaps.py' 2021-01-09T17:48:24,014 adding 'jcvi/assembly/allpaths.py' 2021-01-09T17:48:24,016 adding 'jcvi/assembly/amos.py' 2021-01-09T17:48:24,019 adding 'jcvi/assembly/automaton.py' 2021-01-09T17:48:24,020 adding 'jcvi/assembly/bambus.py' 2021-01-09T17:48:24,022 adding 'jcvi/assembly/base.py' 2021-01-09T17:48:24,028 adding 'jcvi/assembly/ca.py' 2021-01-09T17:48:24,077 adding 'jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so' 2021-01-09T17:48:24,080 adding 'jcvi/assembly/chic.pyx' 2021-01-09T17:48:24,082 adding 'jcvi/assembly/coverage.py' 2021-01-09T17:48:24,084 adding 'jcvi/assembly/gaps.py' 2021-01-09T17:48:24,087 adding 'jcvi/assembly/geneticmap.py' 2021-01-09T17:48:24,092 adding 'jcvi/assembly/goldenpath.py' 2021-01-09T17:48:24,101 adding 'jcvi/assembly/hic.py' 2021-01-09T17:48:24,107 adding 'jcvi/assembly/kmer.py' 2021-01-09T17:48:24,108 adding 'jcvi/assembly/meraculous.py' 2021-01-09T17:48:24,110 adding 'jcvi/assembly/opticalmap.py' 2021-01-09T17:48:24,115 adding 'jcvi/assembly/patch.py' 2021-01-09T17:48:24,117 adding 'jcvi/assembly/pbjelly.py' 2021-01-09T17:48:24,120 adding 'jcvi/assembly/postprocess.py' 2021-01-09T17:48:24,123 adding 'jcvi/assembly/preprocess.py' 2021-01-09T17:48:24,125 adding 'jcvi/assembly/sim.py' 2021-01-09T17:48:24,127 adding 'jcvi/assembly/soap.py' 2021-01-09T17:48:24,130 adding 'jcvi/assembly/sspace.py' 2021-01-09T17:48:24,132 adding 'jcvi/assembly/syntenypath.py' 2021-01-09T17:48:24,134 adding 'jcvi/assembly/trinity.py' 2021-01-09T17:48:24,136 adding 'jcvi/assembly/unitig.py' 2021-01-09T17:48:24,139 adding 'jcvi/compara/__init__.py' 2021-01-09T17:48:24,140 adding 'jcvi/compara/__main__.py' 2021-01-09T17:48:24,142 adding 'jcvi/compara/blastfilter.py' 2021-01-09T17:48:24,146 adding 'jcvi/compara/catalog.py' 2021-01-09T17:48:24,149 adding 'jcvi/compara/fractionation.py' 2021-01-09T17:48:24,151 adding 'jcvi/compara/pad.py' 2021-01-09T17:48:24,153 adding 'jcvi/compara/phylogeny.py' 2021-01-09T17:48:24,155 adding 'jcvi/compara/quota.py' 2021-01-09T17:48:24,157 adding 'jcvi/compara/reconstruct.py' 2021-01-09T17:48:24,159 adding 'jcvi/compara/synfind.py' 2021-01-09T17:48:24,168 adding 'jcvi/compara/synteny.py' 2021-01-09T17:48:24,171 adding 'jcvi/formats/__init__.py' 2021-01-09T17:48:24,172 adding 'jcvi/formats/__main__.py' 2021-01-09T17:48:24,174 adding 'jcvi/formats/ace.py' 2021-01-09T17:48:24,182 adding 'jcvi/formats/agp.py' 2021-01-09T17:48:24,187 adding 'jcvi/formats/base.py' 2021-01-09T17:48:24,197 adding 'jcvi/formats/bed.py' 2021-01-09T17:48:24,203 adding 'jcvi/formats/blast.py' 2021-01-09T17:48:24,205 adding 'jcvi/formats/btab.py' 2021-01-09T17:48:24,309 adding 'jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so' 2021-01-09T17:48:24,314 adding 'jcvi/formats/cblast.pyx' 2021-01-09T17:48:24,315 adding 'jcvi/formats/cdt.py' 2021-01-09T17:48:24,317 adding 'jcvi/formats/chain.py' 2021-01-09T17:48:24,319 adding 'jcvi/formats/contig.py' 2021-01-09T17:48:24,321 adding 'jcvi/formats/coords.py' 2021-01-09T17:48:24,323 adding 'jcvi/formats/excel.py' 2021-01-09T17:48:24,332 adding 'jcvi/formats/fasta.py' 2021-01-09T17:48:24,337 adding 'jcvi/formats/fastq.py' 2021-01-09T17:48:24,339 adding 'jcvi/formats/fpc.py' 2021-01-09T17:48:24,341 adding 'jcvi/formats/genbank.py' 2021-01-09T17:48:24,356 adding 'jcvi/formats/gff.py' 2021-01-09T17:48:24,359 adding 'jcvi/formats/html.py' 2021-01-09T17:48:24,360 adding 'jcvi/formats/maf.py' 2021-01-09T17:48:24,361 adding 'jcvi/formats/obo.py' 2021-01-09T17:48:24,363 adding 'jcvi/formats/paf.py' 2021-01-09T17:48:24,364 adding 'jcvi/formats/pdf.py' 2021-01-09T17:48:24,366 adding 'jcvi/formats/posmap.py' 2021-01-09T17:48:24,368 adding 'jcvi/formats/psl.py' 2021-01-09T17:48:24,370 adding 'jcvi/formats/pyblast.py' 2021-01-09T17:48:24,374 adding 'jcvi/formats/sam.py' 2021-01-09T17:48:24,376 adding 'jcvi/formats/sbt.py' 2021-01-09T17:48:24,378 adding 'jcvi/formats/sizes.py' 2021-01-09T17:48:24,381 adding 'jcvi/formats/vcf.py' 2021-01-09T17:48:24,383 adding 'jcvi/graphics/__init__.py' 2021-01-09T17:48:24,384 adding 'jcvi/graphics/__main__.py' 2021-01-09T17:48:24,387 adding 'jcvi/graphics/align.py' 2021-01-09T17:48:24,390 adding 'jcvi/graphics/assembly.py' 2021-01-09T17:48:24,393 adding 'jcvi/graphics/base.py' 2021-01-09T17:48:24,395 adding 'jcvi/graphics/blastplot.py' 2021-01-09T17:48:24,398 adding 'jcvi/graphics/chromosome.py' 2021-01-09T17:48:24,400 adding 'jcvi/graphics/coverage.py' 2021-01-09T17:48:24,403 adding 'jcvi/graphics/dotplot.py' 2021-01-09T17:48:24,406 adding 'jcvi/graphics/glyph.py' 2021-01-09T17:48:24,410 adding 'jcvi/graphics/grabseeds.py' 2021-01-09T17:48:24,411 adding 'jcvi/graphics/graph.py' 2021-01-09T17:48:24,413 adding 'jcvi/graphics/heatmap.py' 2021-01-09T17:48:24,415 adding 'jcvi/graphics/histogram.py' 2021-01-09T17:48:24,417 adding 'jcvi/graphics/karyotype.py' 2021-01-09T17:48:24,422 adding 'jcvi/graphics/landscape.py' 2021-01-09T17:48:24,423 adding 'jcvi/graphics/logo.py' 2021-01-09T17:48:24,425 adding 'jcvi/graphics/mummerplot.py' 2021-01-09T17:48:24,427 adding 'jcvi/graphics/synteny.py' 2021-01-09T17:48:24,429 adding 'jcvi/graphics/table.py' 2021-01-09T17:48:24,432 adding 'jcvi/graphics/tree.py' 2021-01-09T17:48:24,434 adding 'jcvi/graphics/wheel.py' 2021-01-09T17:48:24,436 adding 'jcvi/graphics/whisker.py' 2021-01-09T17:48:24,438 adding 'jcvi/projects/__init__.py' 2021-01-09T17:48:24,439 adding 'jcvi/projects/__main__.py' 2021-01-09T17:48:24,442 adding 'jcvi/projects/age.py' 2021-01-09T17:48:24,443 adding 'jcvi/projects/alfalfa.py' 2021-01-09T17:48:24,446 adding 'jcvi/projects/allmaps.py' 2021-01-09T17:48:24,448 adding 'jcvi/projects/bites.py' 2021-01-09T17:48:24,449 adding 'jcvi/projects/heterosis.py' 2021-01-09T17:48:24,452 adding 'jcvi/projects/ies.py' 2021-01-09T17:48:24,455 adding 'jcvi/projects/misc.py' 2021-01-09T17:48:24,458 adding 'jcvi/projects/napus.py' 2021-01-09T17:48:24,461 adding 'jcvi/projects/pineapple.py' 2021-01-09T17:48:24,462 adding 'jcvi/projects/pistachio.py' 2021-01-09T17:48:24,471 adding 'jcvi/projects/str.py' 2021-01-09T17:48:24,474 adding 'jcvi/projects/sugarcane.py' 2021-01-09T17:48:24,477 adding 'jcvi/projects/synfind.py' 2021-01-09T17:48:24,481 adding 'jcvi/projects/tgbs.py' 2021-01-09T17:48:24,483 adding 'jcvi/projects/vanilla.py' 2021-01-09T17:48:24,485 adding 'jcvi/utils/__init__.py' 2021-01-09T17:48:24,486 adding 'jcvi/utils/__main__.py' 2021-01-09T17:48:24,489 adding 'jcvi/utils/aws.py' 2021-01-09T17:48:24,492 adding 'jcvi/utils/cbook.py' 2021-01-09T17:48:24,494 adding 'jcvi/utils/db.py' 2021-01-09T17:48:24,496 adding 'jcvi/utils/ez_setup.py' 2021-01-09T17:48:24,497 adding 'jcvi/utils/grouper.py' 2021-01-09T17:48:24,500 adding 'jcvi/utils/iter.py' 2021-01-09T17:48:24,502 adding 'jcvi/utils/orderedcollections.py' 2021-01-09T17:48:24,504 adding 'jcvi/utils/range.py' 2021-01-09T17:48:24,506 adding 'jcvi/utils/table.py' 2021-01-09T17:48:24,507 adding 'jcvi/utils/taxonomy.py' 2021-01-09T17:48:24,508 adding 'jcvi/utils/webcolors.py' 2021-01-09T17:48:24,512 adding 'jcvi/utils/data/Airswing.ttf' 2021-01-09T17:48:24,529 adding 'jcvi/utils/data/Collegia.ttf' 2021-01-09T17:48:24,533 adding 'jcvi/utils/data/HookedUp.ttf' 2021-01-09T17:48:24,539 adding 'jcvi/utils/data/Humor-Sans.ttf' 2021-01-09T17:48:24,543 adding 'jcvi/utils/data/TREDs.meta.csv' 2021-01-09T17:48:24,545 adding 'jcvi/utils/data/__init__.py' 2021-01-09T17:48:24,546 adding 'jcvi/utils/data/adapters.fasta' 2021-01-09T17:48:24,547 adding 'jcvi/utils/data/blosum80.mat' 2021-01-09T17:48:24,549 adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc' 2021-01-09T17:48:24,551 adding 'jcvi/utils/data/colorchecker.txt' 2021-01-09T17:48:24,557 adding 'jcvi/utils/data/hg38.band.txt' 2021-01-09T17:48:24,560 adding 'jcvi/utils/data/hg38.chrom.sizes' 2021-01-09T17:48:24,561 adding 'jcvi/utils/data/instance.json' 2021-01-09T17:48:24,564 adding 'jcvi/variation/__init__.py' 2021-01-09T17:48:24,565 adding 'jcvi/variation/__main__.py' 2021-01-09T17:48:24,571 adding 'jcvi/variation/cnv.py' 2021-01-09T17:48:24,573 adding 'jcvi/variation/deconvolute.py' 2021-01-09T17:48:24,576 adding 'jcvi/variation/delly.py' 2021-01-09T17:48:24,579 adding 'jcvi/variation/impute.py' 2021-01-09T17:48:24,581 adding 'jcvi/variation/phase.py' 2021-01-09T17:48:24,583 adding 'jcvi/variation/snp.py' 2021-01-09T17:48:24,591 adding 'jcvi/variation/str.py' 2021-01-09T17:48:24,594 adding 'jcvi/variation/tassel.py' 2021-01-09T17:48:24,596 adding 'jcvi-1.1.2.dist-info/LICENSE' 2021-01-09T17:48:24,598 adding 'jcvi-1.1.2.dist-info/METADATA' 2021-01-09T17:48:24,599 adding 'jcvi-1.1.2.dist-info/WHEEL' 2021-01-09T17:48:24,600 adding 'jcvi-1.1.2.dist-info/top_level.txt' 2021-01-09T17:48:24,603 adding 'jcvi-1.1.2.dist-info/RECORD' 2021-01-09T17:48:24,733 removing build/bdist.linux-armv7l/wheel 2021-01-09T17:48:26,235 Building wheel for jcvi (setup.py): finished with status 'done' 2021-01-09T17:48:26,281 Created wheel for jcvi: filename=jcvi-1.1.2-cp37-cp37m-linux_armv7l.whl size=1188801 sha256=6f04e777b9e8f954b4b22810a1607b5d1d2230b9c8ed5142cb3d10a148cfbb48 2021-01-09T17:48:26,281 Stored in directory: /tmp/pip-ephem-wheel-cache-o6uf7wvc/wheels/33/88/ee/df3743a4acaffa92732c3e087d750da46d351bcc799a03674a 2021-01-09T17:48:26,284 Successfully built jcvi 2021-01-09T17:48:26,341 Removed build tracker: '/tmp/pip-req-tracker-voepfz7d'