2021-01-11T02:53:08,491 Created temporary directory: /tmp/pip-ephem-wheel-cache-hysl2llw 2021-01-11T02:53:08,494 Created temporary directory: /tmp/pip-req-tracker-agtsfxz8 2021-01-11T02:53:08,494 Initialized build tracking at /tmp/pip-req-tracker-agtsfxz8 2021-01-11T02:53:08,495 Created build tracker: /tmp/pip-req-tracker-agtsfxz8 2021-01-11T02:53:08,495 Entered build tracker: /tmp/pip-req-tracker-agtsfxz8 2021-01-11T02:53:08,495 Created temporary directory: /tmp/pip-wheel-v5leh5it 2021-01-11T02:53:08,506 1 location(s) to search for versions of jcvi: 2021-01-11T02:53:08,506 * https://pypi.org/simple/jcvi/ 2021-01-11T02:53:08,506 Fetching project page and analyzing links: https://pypi.org/simple/jcvi/ 2021-01-11T02:53:08,507 Getting page https://pypi.org/simple/jcvi/ 2021-01-11T02:53:08,508 Found index url https://pypi.org/simple 2021-01-11T02:53:08,895 Found link 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https://files.pythonhosted.org/packages/d8/23/2d8a77861f1c1e066a6d8edc217c9217641a6e7ca5cdd5539ccd1b6ab8b9/jcvi-1.0.14.tar.gz#sha256=2fda3b5e0dc9dcf0fb30578033d9274a99723b54ce6e514936f9dbd2c872f626 (from https://pypi.org/simple/jcvi/), version: 1.0.14 2021-01-11T02:53:08,909 Found link https://files.pythonhosted.org/packages/74/c8/e384f7963f349e571795468fbabf451aa903825736fde6e9d3474c238463/jcvi-1.1.1.tar.gz#sha256=ad22b0efeeb8d9fa3e9a66871b796f6fc2072e4cb48491f5b18602e585b468bb (from https://pypi.org/simple/jcvi/), version: 1.1.1 2021-01-11T02:53:08,909 Found link https://files.pythonhosted.org/packages/8f/06/0a6cdc66e7ef36c658c8867b0573c72aa7b2394759a69ed9aa5d64aa2f51/jcvi-1.1.2.tar.gz#sha256=82c914195ac82b3770bce0e0754671871a139c5c4c52158ae4723ec76c975194 (from https://pypi.org/simple/jcvi/), version: 1.1.2 2021-01-11T02:53:08,909 Found link https://files.pythonhosted.org/packages/f3/4d/90ec025ffba6064f62d2480deebee2096b1c581484f5deb807081f68b826/jcvi-1.1.3.tar.gz#sha256=bff23cbdfa634dd22beff778e7405d509414d3a98b7531397b03db3e0f7037e5 (from https://pypi.org/simple/jcvi/), version: 1.1.3 2021-01-11T02:53:08,909 Found link https://files.pythonhosted.org/packages/aa/77/af2e6dbb516a39b09f908e85b2e1f52c8003bcf822f59434b1241da7d057/jcvi-1.1.4.tar.gz#sha256=de96b414804a5a9884845cc5923e6772339ea86b3aae40d02841e59944ce1777 (from https://pypi.org/simple/jcvi/), version: 1.1.4 2021-01-11T02:53:08,910 Found link https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b (from https://pypi.org/simple/jcvi/), version: 1.1.5 2021-01-11T02:53:08,922 Given no hashes to check 1 links for project 'jcvi': discarding no candidates 2021-01-11T02:53:08,923 Using version 1.1.5 (newest of versions: 1.1.5) 2021-01-11T02:53:08,926 Collecting jcvi==1.1.5 2021-01-11T02:53:08,928 Created temporary directory: /tmp/pip-unpack-flc89qau 2021-01-11T02:53:08,978 Downloading jcvi-1.1.5.tar.gz (821 kB) 2021-01-11T02:53:10,879 Added jcvi==1.1.5 from https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b to build tracker '/tmp/pip-req-tracker-agtsfxz8' 2021-01-11T02:53:10,880 Running setup.py (path:/tmp/pip-wheel-v5leh5it/jcvi/setup.py) egg_info for package jcvi 2021-01-11T02:53:10,881 Created temporary directory: /tmp/pip-pip-egg-info-ot4ycbrm 2021-01-11T02:53:10,881 Running command python setup.py egg_info 2021-01-11T02:53:12,530 running egg_info 2021-01-11T02:53:12,532 creating /tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info 2021-01-11T02:53:12,534 writing /tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info/PKG-INFO 2021-01-11T02:53:12,537 writing dependency_links to /tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info/dependency_links.txt 2021-01-11T02:53:12,539 writing requirements to /tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info/requires.txt 2021-01-11T02:53:12,541 writing top-level names to /tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info/top_level.txt 2021-01-11T02:53:12,543 writing manifest file '/tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info/SOURCES.txt' 2021-01-11T02:53:12,569 reading manifest file '/tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info/SOURCES.txt' 2021-01-11T02:53:12,570 reading manifest template 'MANIFEST.in' 2021-01-11T02:53:12,583 writing manifest file '/tmp/pip-pip-egg-info-ot4ycbrm/jcvi.egg-info/SOURCES.txt' 2021-01-11T02:53:12,585 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1.1.5' to '1.1.5' 2021-01-11T02:53:12,585 warnings.warn(tmpl.format(**locals())) 2021-01-11T02:53:12,681 Source in /tmp/pip-wheel-v5leh5it/jcvi has version 1.1.5, which satisfies requirement jcvi==1.1.5 from https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b 2021-01-11T02:53:12,682 Removed jcvi==1.1.5 from https://files.pythonhosted.org/packages/32/89/5d32094c25a676e1d43eec6c4cc8f6eeef77f939286faece04986ef491bd/jcvi-1.1.5.tar.gz#sha256=9879ca50acfbc2f42afd26a7c211ae3653edfc70fcafa4848985c215a51dbe0b from build tracker '/tmp/pip-req-tracker-agtsfxz8' 2021-01-11T02:53:12,685 Building wheels for collected packages: jcvi 2021-01-11T02:53:12,690 Created temporary directory: /tmp/pip-wheel-e9__h7av 2021-01-11T02:53:12,691 Building wheel for jcvi (setup.py): started 2021-01-11T02:53:12,691 Destination directory: /tmp/pip-wheel-e9__h7av 2021-01-11T02:53:12,691 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-v5leh5it/jcvi/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-v5leh5it/jcvi/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-e9__h7av 2021-01-11T02:53:14,167 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:452: UserWarning: Normalizing 'v1.1.5' to '1.1.5' 2021-01-11T02:53:14,168 warnings.warn(tmpl.format(**locals())) 2021-01-11T02:53:14,225 running bdist_wheel 2021-01-11T02:53:14,230 running build 2021-01-11T02:53:14,230 running build_py 2021-01-11T02:53:14,236 creating build 2021-01-11T02:53:14,237 creating build/lib.linux-armv7l-3.7 2021-01-11T02:53:14,237 creating build/lib.linux-armv7l-3.7/jcvi 2021-01-11T02:53:14,239 copying jcvi/__init__.py -> build/lib.linux-armv7l-3.7/jcvi 2021-01-11T02:53:14,241 copying jcvi/_version.py -> build/lib.linux-armv7l-3.7/jcvi 2021-01-11T02:53:14,244 creating build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,245 copying jcvi/apps/phylo.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,248 copying jcvi/apps/base.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,252 copying jcvi/apps/cdhit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,254 copying jcvi/apps/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,256 copying jcvi/apps/gbsubmit.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,258 copying jcvi/apps/cap3.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,260 copying jcvi/apps/tesseract.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,262 copying jcvi/apps/mask.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,264 copying jcvi/apps/blastplus.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,266 copying jcvi/apps/softlink.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,268 copying jcvi/apps/biomart.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,271 copying jcvi/apps/uniprot.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,273 copying jcvi/apps/r.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,275 copying jcvi/apps/restriction.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,277 copying jcvi/apps/uclust.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,280 copying jcvi/apps/gmap.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,282 copying jcvi/apps/vecscreen.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,284 copying jcvi/apps/bwa.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,287 copying jcvi/apps/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,289 copying jcvi/apps/emboss.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,291 copying jcvi/apps/lastz.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,293 copying jcvi/apps/script.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,295 copying jcvi/apps/align.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,297 copying jcvi/apps/ks.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,300 copying jcvi/apps/fetch.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,303 copying jcvi/apps/grid.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,306 copying jcvi/apps/bowtie.py -> build/lib.linux-armv7l-3.7/jcvi/apps 2021-01-11T02:53:14,309 creating build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,310 copying jcvi/annotation/pasa.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,313 copying jcvi/annotation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,315 copying jcvi/annotation/depth.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,317 copying jcvi/annotation/maker.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,319 copying jcvi/annotation/train.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,321 copying jcvi/annotation/ahrd.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,324 copying jcvi/annotation/reformat.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,327 copying jcvi/annotation/qc.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,330 copying jcvi/annotation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,332 copying jcvi/annotation/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,334 copying jcvi/annotation/stats.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,337 copying jcvi/annotation/evm.py -> build/lib.linux-armv7l-3.7/jcvi/annotation 2021-01-11T02:53:14,340 creating build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,341 copying jcvi/projects/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,344 copying jcvi/projects/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,346 copying jcvi/projects/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,349 copying jcvi/projects/pistachio.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,351 copying jcvi/projects/tgbs.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,354 copying jcvi/projects/ies.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,356 copying jcvi/projects/alfalfa.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,358 copying jcvi/projects/vanilla.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,360 copying jcvi/projects/heterosis.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,363 copying jcvi/projects/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,365 copying jcvi/projects/bites.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,367 copying jcvi/projects/napus.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,370 copying jcvi/projects/str.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,374 copying jcvi/projects/sugarcane.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,377 copying jcvi/projects/age.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,380 copying jcvi/projects/pineapple.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,383 copying jcvi/projects/misc.py -> build/lib.linux-armv7l-3.7/jcvi/projects 2021-01-11T02:53:14,387 creating build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,388 copying jcvi/compara/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,390 copying jcvi/compara/synfind.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,393 copying jcvi/compara/phylogeny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,395 copying jcvi/compara/quota.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,397 copying jcvi/compara/pad.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,400 copying jcvi/compara/catalog.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,403 copying jcvi/compara/fractionation.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,406 copying jcvi/compara/blastfilter.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,408 copying jcvi/compara/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,410 copying jcvi/compara/reconstruct.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,413 copying jcvi/compara/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/compara 2021-01-11T02:53:14,418 creating build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,419 copying jcvi/variation/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,421 copying jcvi/variation/phase.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,423 copying jcvi/variation/tassel.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,426 copying jcvi/variation/cnv.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,429 copying jcvi/variation/deconvolute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,431 copying jcvi/variation/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,433 copying jcvi/variation/delly.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,436 copying jcvi/variation/str.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,439 copying jcvi/variation/impute.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,442 copying jcvi/variation/snp.py -> build/lib.linux-armv7l-3.7/jcvi/variation 2021-01-11T02:53:14,575 creating build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,576 copying jcvi/utils/iter.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,581 copying jcvi/utils/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,583 copying jcvi/utils/orderedcollections.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,587 copying jcvi/utils/console.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,590 copying jcvi/utils/ez_setup.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,593 copying jcvi/utils/grouper.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,595 copying jcvi/utils/db.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,598 copying jcvi/utils/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,600 copying jcvi/utils/range.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,602 copying jcvi/utils/webcolors.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,605 copying jcvi/utils/taxonomy.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,607 copying jcvi/utils/aws.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,610 copying jcvi/utils/cbook.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,612 copying jcvi/utils/table.py -> build/lib.linux-armv7l-3.7/jcvi/utils 2021-01-11T02:53:14,615 creating build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,617 copying jcvi/algorithms/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,618 copying jcvi/algorithms/supermap.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,621 copying jcvi/algorithms/tsp.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,624 copying jcvi/algorithms/lis.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,626 copying jcvi/algorithms/formula.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,629 copying jcvi/algorithms/matrix.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,631 copying jcvi/algorithms/ml.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,633 copying jcvi/algorithms/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,636 copying jcvi/algorithms/ec.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,638 copying jcvi/algorithms/graph.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,641 copying jcvi/algorithms/lpsolve.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,643 copying jcvi/algorithms/maxsum.py -> build/lib.linux-armv7l-3.7/jcvi/algorithms 2021-01-11T02:53:14,647 creating build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,648 copying jcvi/assembly/allmaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,653 copying jcvi/assembly/base.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,656 copying jcvi/assembly/unitig.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,659 copying jcvi/assembly/kmer.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,662 copying jcvi/assembly/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,664 copying jcvi/assembly/meraculous.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,667 copying jcvi/assembly/preprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,670 copying jcvi/assembly/ca.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,674 copying jcvi/assembly/hic.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,677 copying jcvi/assembly/bambus.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,679 copying jcvi/assembly/trinity.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,682 copying jcvi/assembly/goldenpath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,685 copying jcvi/assembly/gaps.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,687 copying jcvi/assembly/allpaths.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,690 copying jcvi/assembly/geneticmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,693 copying jcvi/assembly/sspace.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,696 copying jcvi/assembly/soap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,698 copying jcvi/assembly/postprocess.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,701 copying jcvi/assembly/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,703 copying jcvi/assembly/amos.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,706 copying jcvi/assembly/automaton.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,709 copying jcvi/assembly/patch.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,712 copying jcvi/assembly/opticalmap.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,715 copying jcvi/assembly/pbjelly.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,718 copying jcvi/assembly/sim.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,721 copying jcvi/assembly/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,723 copying jcvi/assembly/syntenypath.py -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,728 creating build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,729 copying jcvi/formats/psl.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,732 copying jcvi/formats/excel.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,735 copying jcvi/formats/base.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,738 copying jcvi/formats/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,740 copying jcvi/formats/contig.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,743 copying jcvi/formats/paf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,745 copying jcvi/formats/btab.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,748 copying jcvi/formats/sizes.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,750 copying jcvi/formats/sbt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,753 copying jcvi/formats/fpc.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,755 copying jcvi/formats/fastq.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,759 copying jcvi/formats/pdf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,761 copying jcvi/formats/coords.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,764 copying jcvi/formats/agp.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,769 copying jcvi/formats/posmap.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,772 copying jcvi/formats/sam.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,775 copying jcvi/formats/fasta.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,780 copying jcvi/formats/pyblast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,782 copying jcvi/formats/gff.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,788 copying jcvi/formats/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,790 copying jcvi/formats/html.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,792 copying jcvi/formats/maf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,794 copying jcvi/formats/chain.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,797 copying jcvi/formats/cdt.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,799 copying jcvi/formats/vcf.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,802 copying jcvi/formats/bed.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,806 copying jcvi/formats/blast.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,809 copying jcvi/formats/ace.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,811 copying jcvi/formats/obo.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,814 copying jcvi/formats/genbank.py -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,819 creating build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,820 copying jcvi/graphics/base.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,823 copying jcvi/graphics/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,825 copying jcvi/graphics/blastplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,828 copying jcvi/graphics/glyph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,831 copying jcvi/graphics/dotplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,833 copying jcvi/graphics/histogram.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,836 copying jcvi/graphics/landscape.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,840 copying jcvi/graphics/wheel.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,842 copying jcvi/graphics/heatmap.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,844 copying jcvi/graphics/chromosome.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,847 copying jcvi/graphics/__main__.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,850 copying jcvi/graphics/synteny.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,853 copying jcvi/graphics/graph.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,855 copying jcvi/graphics/mummerplot.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,857 copying jcvi/graphics/tree.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,860 copying jcvi/graphics/karyotype.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,863 copying jcvi/graphics/assembly.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,866 copying jcvi/graphics/grabseeds.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,869 copying jcvi/graphics/logo.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,871 copying jcvi/graphics/align.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,874 copying jcvi/graphics/whisker.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,877 copying jcvi/graphics/table.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,879 copying jcvi/graphics/coverage.py -> build/lib.linux-armv7l-3.7/jcvi/graphics 2021-01-11T02:53:14,883 creating build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,884 copying jcvi/utils/data/__init__.py -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,885 running egg_info 2021-01-11T02:53:14,896 writing jcvi.egg-info/PKG-INFO 2021-01-11T02:53:14,899 writing dependency_links to jcvi.egg-info/dependency_links.txt 2021-01-11T02:53:14,901 writing requirements to jcvi.egg-info/requires.txt 2021-01-11T02:53:14,902 writing top-level names to jcvi.egg-info/top_level.txt 2021-01-11T02:53:14,925 reading manifest file 'jcvi.egg-info/SOURCES.txt' 2021-01-11T02:53:14,933 reading manifest template 'MANIFEST.in' 2021-01-11T02:53:14,948 writing manifest file 'jcvi.egg-info/SOURCES.txt' 2021-01-11T02:53:14,955 copying jcvi/assembly/chic.pyx -> build/lib.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:14,958 copying jcvi/formats/cblast.pyx -> build/lib.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:14,961 copying jcvi/utils/data/Airswing.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,964 copying jcvi/utils/data/Collegia.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,970 copying jcvi/utils/data/HookedUp.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,973 copying jcvi/utils/data/Humor-Sans.ttf -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,976 copying jcvi/utils/data/TREDs.meta.csv -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,980 copying jcvi/utils/data/adapters.fasta -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,982 copying jcvi/utils/data/blosum80.mat -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,985 copying jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,988 copying jcvi/utils/data/colorchecker.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,991 copying jcvi/utils/data/hg38.band.txt -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,996 copying jcvi/utils/data/hg38.chrom.sizes -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:14,999 copying jcvi/utils/data/instance.json -> build/lib.linux-armv7l-3.7/jcvi/utils/data 2021-01-11T02:53:15,019 UPDATING build/lib.linux-armv7l-3.7/jcvi/_version.py 2021-01-11T02:53:15,020 set build/lib.linux-armv7l-3.7/jcvi/_version.py to 'v1.1.5' 2021-01-11T02:53:15,021 running build_ext 2021-01-11T02:53:15,112 cythoning jcvi/assembly/chic.pyx to jcvi/assembly/chic.c 2021-01-11T02:53:15,721 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-v5leh5it/jcvi/jcvi/assembly/chic.pyx 2021-01-11T02:53:15,722 tree = Parsing.p_module(s, pxd, full_module_name) 2021-01-11T02:53:17,180 cythoning jcvi/formats/cblast.pyx to jcvi/formats/cblast.c 2021-01-11T02:53:17,186 /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-v5leh5it/jcvi/jcvi/formats/cblast.pyx 2021-01-11T02:53:17,186 tree = Parsing.p_module(s, pxd, full_module_name) 2021-01-11T02:53:17,782 building 'jcvi.assembly.chic' extension 2021-01-11T02:53:17,783 creating build/temp.linux-armv7l-3.7 2021-01-11T02:53:17,783 creating build/temp.linux-armv7l-3.7/jcvi 2021-01-11T02:53:17,784 creating build/temp.linux-armv7l-3.7/jcvi/assembly 2021-01-11T02:53:17,785 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c jcvi/assembly/chic.c -o build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -O3 2021-01-11T02:53:18,179 In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2021-01-11T02:53:18,179 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-01-11T02:53:18,180 from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-01-11T02:53:18,180 from jcvi/assembly/chic.c:610: 2021-01-11T02:53:18,180 /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-01-11T02:53:18,180 #warning "Using deprecated NumPy API, disable it with " \ 2021-01-11T02:53:18,181 ^~~~~~~ 2021-01-11T02:53:22,039 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/assembly/chic.o -o build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so 2021-01-11T02:53:22,184 building 'jcvi.formats.cblast' extension 2021-01-11T02:53:22,185 creating build/temp.linux-armv7l-3.7/jcvi/formats 2021-01-11T02:53:22,185 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c jcvi/formats/cblast.c -o build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -O3 2021-01-11T02:53:29,197 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/jcvi/formats/cblast.o -o build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so 2021-01-11T02:53:29,362 installing to build/bdist.linux-armv7l/wheel 2021-01-11T02:53:29,362 running install 2021-01-11T02:53:29,363 running install_lib 2021-01-11T02:53:29,368 creating build/bdist.linux-armv7l 2021-01-11T02:53:29,368 creating build/bdist.linux-armv7l/wheel 2021-01-11T02:53:29,370 creating build/bdist.linux-armv7l/wheel/jcvi 2021-01-11T02:53:29,372 copying build/lib.linux-armv7l-3.7/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-01-11T02:53:29,375 creating build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,376 copying build/lib.linux-armv7l-3.7/jcvi/apps/phylo.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,380 copying build/lib.linux-armv7l-3.7/jcvi/apps/base.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,383 copying build/lib.linux-armv7l-3.7/jcvi/apps/cdhit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,386 copying build/lib.linux-armv7l-3.7/jcvi/apps/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,388 copying build/lib.linux-armv7l-3.7/jcvi/apps/gbsubmit.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,390 copying build/lib.linux-armv7l-3.7/jcvi/apps/cap3.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,393 copying build/lib.linux-armv7l-3.7/jcvi/apps/tesseract.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,395 copying build/lib.linux-armv7l-3.7/jcvi/apps/mask.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,397 copying build/lib.linux-armv7l-3.7/jcvi/apps/blastplus.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,399 copying build/lib.linux-armv7l-3.7/jcvi/apps/softlink.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,402 copying build/lib.linux-armv7l-3.7/jcvi/apps/biomart.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,405 copying build/lib.linux-armv7l-3.7/jcvi/apps/uniprot.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,407 copying build/lib.linux-armv7l-3.7/jcvi/apps/r.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,410 copying build/lib.linux-armv7l-3.7/jcvi/apps/restriction.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,412 copying build/lib.linux-armv7l-3.7/jcvi/apps/uclust.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,416 copying build/lib.linux-armv7l-3.7/jcvi/apps/gmap.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,418 copying build/lib.linux-armv7l-3.7/jcvi/apps/vecscreen.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,421 copying build/lib.linux-armv7l-3.7/jcvi/apps/bwa.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,424 copying build/lib.linux-armv7l-3.7/jcvi/apps/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,427 copying build/lib.linux-armv7l-3.7/jcvi/apps/emboss.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,430 copying build/lib.linux-armv7l-3.7/jcvi/apps/lastz.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,433 copying build/lib.linux-armv7l-3.7/jcvi/apps/script.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,435 copying build/lib.linux-armv7l-3.7/jcvi/apps/align.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,438 copying build/lib.linux-armv7l-3.7/jcvi/apps/ks.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,442 copying build/lib.linux-armv7l-3.7/jcvi/apps/fetch.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,445 copying build/lib.linux-armv7l-3.7/jcvi/apps/grid.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,448 copying build/lib.linux-armv7l-3.7/jcvi/apps/bowtie.py -> build/bdist.linux-armv7l/wheel/jcvi/apps 2021-01-11T02:53:29,452 creating build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,453 copying build/lib.linux-armv7l-3.7/jcvi/annotation/pasa.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,456 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,458 copying build/lib.linux-armv7l-3.7/jcvi/annotation/depth.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,461 copying build/lib.linux-armv7l-3.7/jcvi/annotation/maker.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,464 copying build/lib.linux-armv7l-3.7/jcvi/annotation/train.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,466 copying build/lib.linux-armv7l-3.7/jcvi/annotation/ahrd.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,470 copying build/lib.linux-armv7l-3.7/jcvi/annotation/reformat.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,473 copying build/lib.linux-armv7l-3.7/jcvi/annotation/qc.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,476 copying build/lib.linux-armv7l-3.7/jcvi/annotation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,479 copying build/lib.linux-armv7l-3.7/jcvi/annotation/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,481 copying build/lib.linux-armv7l-3.7/jcvi/annotation/stats.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,484 copying build/lib.linux-armv7l-3.7/jcvi/annotation/evm.py -> build/bdist.linux-armv7l/wheel/jcvi/annotation 2021-01-11T02:53:29,488 creating build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,489 copying build/lib.linux-armv7l-3.7/jcvi/projects/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,492 copying build/lib.linux-armv7l-3.7/jcvi/projects/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,494 copying build/lib.linux-armv7l-3.7/jcvi/projects/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,497 copying build/lib.linux-armv7l-3.7/jcvi/projects/pistachio.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,500 copying build/lib.linux-armv7l-3.7/jcvi/projects/tgbs.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,503 copying build/lib.linux-armv7l-3.7/jcvi/projects/ies.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,505 copying build/lib.linux-armv7l-3.7/jcvi/projects/alfalfa.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,507 copying build/lib.linux-armv7l-3.7/jcvi/projects/vanilla.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,510 copying build/lib.linux-armv7l-3.7/jcvi/projects/heterosis.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,513 copying build/lib.linux-armv7l-3.7/jcvi/projects/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,515 copying build/lib.linux-armv7l-3.7/jcvi/projects/bites.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,517 copying build/lib.linux-armv7l-3.7/jcvi/projects/napus.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,520 copying build/lib.linux-armv7l-3.7/jcvi/projects/str.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,524 copying build/lib.linux-armv7l-3.7/jcvi/projects/sugarcane.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,527 copying build/lib.linux-armv7l-3.7/jcvi/projects/age.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,530 copying build/lib.linux-armv7l-3.7/jcvi/projects/pineapple.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,533 copying build/lib.linux-armv7l-3.7/jcvi/projects/misc.py -> build/bdist.linux-armv7l/wheel/jcvi/projects 2021-01-11T02:53:29,537 creating build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,538 copying build/lib.linux-armv7l-3.7/jcvi/compara/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,540 copying build/lib.linux-armv7l-3.7/jcvi/compara/synfind.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,543 copying build/lib.linux-armv7l-3.7/jcvi/compara/phylogeny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,545 copying build/lib.linux-armv7l-3.7/jcvi/compara/quota.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,548 copying build/lib.linux-armv7l-3.7/jcvi/compara/pad.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,550 copying build/lib.linux-armv7l-3.7/jcvi/compara/catalog.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,553 copying build/lib.linux-armv7l-3.7/jcvi/compara/fractionation.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,556 copying build/lib.linux-armv7l-3.7/jcvi/compara/blastfilter.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,559 copying build/lib.linux-armv7l-3.7/jcvi/compara/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,561 copying build/lib.linux-armv7l-3.7/jcvi/compara/reconstruct.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,564 copying build/lib.linux-armv7l-3.7/jcvi/compara/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/compara 2021-01-11T02:53:29,568 copying build/lib.linux-armv7l-3.7/jcvi/_version.py -> build/bdist.linux-armv7l/wheel/jcvi 2021-01-11T02:53:29,571 creating build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,572 copying build/lib.linux-armv7l-3.7/jcvi/variation/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,574 copying build/lib.linux-armv7l-3.7/jcvi/variation/phase.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,576 copying build/lib.linux-armv7l-3.7/jcvi/variation/tassel.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,579 copying build/lib.linux-armv7l-3.7/jcvi/variation/cnv.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,582 copying build/lib.linux-armv7l-3.7/jcvi/variation/deconvolute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,585 copying build/lib.linux-armv7l-3.7/jcvi/variation/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,587 copying build/lib.linux-armv7l-3.7/jcvi/variation/delly.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,590 copying build/lib.linux-armv7l-3.7/jcvi/variation/str.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,593 copying build/lib.linux-armv7l-3.7/jcvi/variation/impute.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,596 copying build/lib.linux-armv7l-3.7/jcvi/variation/snp.py -> build/bdist.linux-armv7l/wheel/jcvi/variation 2021-01-11T02:53:29,600 creating build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,601 copying build/lib.linux-armv7l-3.7/jcvi/utils/iter.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,604 copying build/lib.linux-armv7l-3.7/jcvi/utils/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,606 creating build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,607 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/instance.json -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,610 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/adapters.fasta -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,612 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,613 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/colorchecker.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,616 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/HookedUp.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,619 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Airswing.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,622 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Humor-Sans.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,626 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,629 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/Collegia.ttf -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,636 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/blosum80.mat -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,639 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/chrY.hg38.unique_ccn.gc -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,641 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/TREDs.meta.csv -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,645 copying build/lib.linux-armv7l-3.7/jcvi/utils/data/hg38.band.txt -> build/bdist.linux-armv7l/wheel/jcvi/utils/data 2021-01-11T02:53:29,650 copying build/lib.linux-armv7l-3.7/jcvi/utils/orderedcollections.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,652 copying build/lib.linux-armv7l-3.7/jcvi/utils/console.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,655 copying build/lib.linux-armv7l-3.7/jcvi/utils/ez_setup.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,657 copying build/lib.linux-armv7l-3.7/jcvi/utils/grouper.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,660 copying build/lib.linux-armv7l-3.7/jcvi/utils/db.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,663 copying build/lib.linux-armv7l-3.7/jcvi/utils/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,665 copying build/lib.linux-armv7l-3.7/jcvi/utils/range.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,668 copying build/lib.linux-armv7l-3.7/jcvi/utils/webcolors.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,670 copying build/lib.linux-armv7l-3.7/jcvi/utils/taxonomy.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,673 copying build/lib.linux-armv7l-3.7/jcvi/utils/aws.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,676 copying build/lib.linux-armv7l-3.7/jcvi/utils/cbook.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,679 copying build/lib.linux-armv7l-3.7/jcvi/utils/table.py -> build/bdist.linux-armv7l/wheel/jcvi/utils 2021-01-11T02:53:29,683 creating build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,684 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,686 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/supermap.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,689 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/tsp.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,692 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lis.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,695 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/formula.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,697 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/matrix.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,701 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ml.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,703 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,705 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/ec.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,708 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,712 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/lpsolve.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,715 copying build/lib.linux-armv7l-3.7/jcvi/algorithms/maxsum.py -> build/bdist.linux-armv7l/wheel/jcvi/algorithms 2021-01-11T02:53:29,719 creating build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,720 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allmaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,726 copying build/lib.linux-armv7l-3.7/jcvi/assembly/base.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,729 copying build/lib.linux-armv7l-3.7/jcvi/assembly/unitig.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,733 copying build/lib.linux-armv7l-3.7/jcvi/assembly/kmer.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,737 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,739 copying build/lib.linux-armv7l-3.7/jcvi/assembly/meraculous.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,741 copying build/lib.linux-armv7l-3.7/jcvi/assembly/preprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,745 copying build/lib.linux-armv7l-3.7/jcvi/assembly/ca.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,750 copying build/lib.linux-armv7l-3.7/jcvi/assembly/hic.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,756 copying build/lib.linux-armv7l-3.7/jcvi/assembly/bambus.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,758 copying build/lib.linux-armv7l-3.7/jcvi/assembly/trinity.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,761 copying build/lib.linux-armv7l-3.7/jcvi/assembly/goldenpath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,765 copying build/lib.linux-armv7l-3.7/jcvi/assembly/gaps.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,768 copying build/lib.linux-armv7l-3.7/jcvi/assembly/allpaths.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,772 copying build/lib.linux-armv7l-3.7/jcvi/assembly/geneticmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,775 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sspace.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,778 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,791 copying build/lib.linux-armv7l-3.7/jcvi/assembly/soap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,794 copying build/lib.linux-armv7l-3.7/jcvi/assembly/postprocess.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,798 copying build/lib.linux-armv7l-3.7/jcvi/assembly/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,800 copying build/lib.linux-armv7l-3.7/jcvi/assembly/amos.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,804 copying build/lib.linux-armv7l-3.7/jcvi/assembly/automaton.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,807 copying build/lib.linux-armv7l-3.7/jcvi/assembly/patch.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,810 copying build/lib.linux-armv7l-3.7/jcvi/assembly/opticalmap.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,813 copying build/lib.linux-armv7l-3.7/jcvi/assembly/pbjelly.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,816 copying build/lib.linux-armv7l-3.7/jcvi/assembly/sim.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,819 copying build/lib.linux-armv7l-3.7/jcvi/assembly/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,821 copying build/lib.linux-armv7l-3.7/jcvi/assembly/syntenypath.py -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,824 copying build/lib.linux-armv7l-3.7/jcvi/assembly/chic.pyx -> build/bdist.linux-armv7l/wheel/jcvi/assembly 2021-01-11T02:53:29,828 creating build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,829 copying build/lib.linux-armv7l-3.7/jcvi/formats/psl.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,832 copying build/lib.linux-armv7l-3.7/jcvi/formats/excel.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,835 copying build/lib.linux-armv7l-3.7/jcvi/formats/base.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,839 copying build/lib.linux-armv7l-3.7/jcvi/formats/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,840 copying build/lib.linux-armv7l-3.7/jcvi/formats/contig.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,843 copying build/lib.linux-armv7l-3.7/jcvi/formats/paf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,845 copying build/lib.linux-armv7l-3.7/jcvi/formats/btab.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,848 copying build/lib.linux-armv7l-3.7/jcvi/formats/sizes.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,850 copying build/lib.linux-armv7l-3.7/jcvi/formats/sbt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,853 copying build/lib.linux-armv7l-3.7/jcvi/formats/fpc.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,855 copying build/lib.linux-armv7l-3.7/jcvi/formats/fastq.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,858 copying build/lib.linux-armv7l-3.7/jcvi/formats/pdf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,861 copying build/lib.linux-armv7l-3.7/jcvi/formats/coords.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,863 copying build/lib.linux-armv7l-3.7/jcvi/formats/agp.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,867 copying build/lib.linux-armv7l-3.7/jcvi/formats/posmap.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,870 copying build/lib.linux-armv7l-3.7/jcvi/formats/sam.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,873 copying build/lib.linux-armv7l-3.7/jcvi/formats/fasta.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,878 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,892 copying build/lib.linux-armv7l-3.7/jcvi/formats/pyblast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,895 copying build/lib.linux-armv7l-3.7/jcvi/formats/gff.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,901 copying build/lib.linux-armv7l-3.7/jcvi/formats/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,903 copying build/lib.linux-armv7l-3.7/jcvi/formats/html.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,905 copying build/lib.linux-armv7l-3.7/jcvi/formats/maf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,908 copying build/lib.linux-armv7l-3.7/jcvi/formats/chain.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,911 copying build/lib.linux-armv7l-3.7/jcvi/formats/cdt.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,913 copying build/lib.linux-armv7l-3.7/jcvi/formats/cblast.pyx -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,916 copying build/lib.linux-armv7l-3.7/jcvi/formats/vcf.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,919 copying build/lib.linux-armv7l-3.7/jcvi/formats/bed.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,924 copying build/lib.linux-armv7l-3.7/jcvi/formats/blast.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,928 copying build/lib.linux-armv7l-3.7/jcvi/formats/ace.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,931 copying build/lib.linux-armv7l-3.7/jcvi/formats/obo.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,933 copying build/lib.linux-armv7l-3.7/jcvi/formats/genbank.py -> build/bdist.linux-armv7l/wheel/jcvi/formats 2021-01-11T02:53:29,937 creating build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,939 copying build/lib.linux-armv7l-3.7/jcvi/graphics/base.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,942 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,944 copying build/lib.linux-armv7l-3.7/jcvi/graphics/blastplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,947 copying build/lib.linux-armv7l-3.7/jcvi/graphics/glyph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,951 copying build/lib.linux-armv7l-3.7/jcvi/graphics/dotplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,954 copying build/lib.linux-armv7l-3.7/jcvi/graphics/histogram.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,957 copying build/lib.linux-armv7l-3.7/jcvi/graphics/landscape.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,961 copying build/lib.linux-armv7l-3.7/jcvi/graphics/wheel.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,964 copying build/lib.linux-armv7l-3.7/jcvi/graphics/heatmap.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,967 copying build/lib.linux-armv7l-3.7/jcvi/graphics/chromosome.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,971 copying build/lib.linux-armv7l-3.7/jcvi/graphics/__main__.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,973 copying build/lib.linux-armv7l-3.7/jcvi/graphics/synteny.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,976 copying build/lib.linux-armv7l-3.7/jcvi/graphics/graph.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,979 copying build/lib.linux-armv7l-3.7/jcvi/graphics/mummerplot.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,981 copying build/lib.linux-armv7l-3.7/jcvi/graphics/tree.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,985 copying build/lib.linux-armv7l-3.7/jcvi/graphics/karyotype.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,988 copying build/lib.linux-armv7l-3.7/jcvi/graphics/assembly.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,993 copying build/lib.linux-armv7l-3.7/jcvi/graphics/grabseeds.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:29,997 copying build/lib.linux-armv7l-3.7/jcvi/graphics/logo.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:30,003 copying build/lib.linux-armv7l-3.7/jcvi/graphics/align.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:30,018 copying build/lib.linux-armv7l-3.7/jcvi/graphics/whisker.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:30,021 copying build/lib.linux-armv7l-3.7/jcvi/graphics/table.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:30,025 copying build/lib.linux-armv7l-3.7/jcvi/graphics/coverage.py -> build/bdist.linux-armv7l/wheel/jcvi/graphics 2021-01-11T02:53:30,030 running install_egg_info 2021-01-11T02:53:30,040 Copying jcvi.egg-info to build/bdist.linux-armv7l/wheel/jcvi-1.1.5-py3.7.egg-info 2021-01-11T02:53:30,056 running install_scripts 2021-01-11T02:53:30,134 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-01-11T02:53:30,141 creating build/bdist.linux-armv7l/wheel/jcvi-1.1.5.dist-info/WHEEL 2021-01-11T02:53:30,144 creating '/tmp/pip-wheel-e9__h7av/jcvi-1.1.5-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-01-11T02:53:30,146 adding 'jcvi/__init__.py' 2021-01-11T02:53:30,148 adding 'jcvi/_version.py' 2021-01-11T02:53:30,150 adding 'jcvi/algorithms/__init__.py' 2021-01-11T02:53:30,151 adding 'jcvi/algorithms/__main__.py' 2021-01-11T02:53:30,152 adding 'jcvi/algorithms/ec.py' 2021-01-11T02:53:30,154 adding 'jcvi/algorithms/formula.py' 2021-01-11T02:53:30,156 adding 'jcvi/algorithms/graph.py' 2021-01-11T02:53:30,158 adding 'jcvi/algorithms/lis.py' 2021-01-11T02:53:30,161 adding 'jcvi/algorithms/lpsolve.py' 2021-01-11T02:53:30,163 adding 'jcvi/algorithms/matrix.py' 2021-01-11T02:53:30,164 adding 'jcvi/algorithms/maxsum.py' 2021-01-11T02:53:30,165 adding 'jcvi/algorithms/ml.py' 2021-01-11T02:53:30,166 adding 'jcvi/algorithms/supermap.py' 2021-01-11T02:53:30,168 adding 'jcvi/algorithms/tsp.py' 2021-01-11T02:53:30,170 adding 'jcvi/annotation/__init__.py' 2021-01-11T02:53:30,171 adding 'jcvi/annotation/__main__.py' 2021-01-11T02:53:30,174 adding 'jcvi/annotation/ahrd.py' 2021-01-11T02:53:30,176 adding 'jcvi/annotation/automaton.py' 2021-01-11T02:53:30,178 adding 'jcvi/annotation/depth.py' 2021-01-11T02:53:30,179 adding 'jcvi/annotation/evm.py' 2021-01-11T02:53:30,182 adding 'jcvi/annotation/maker.py' 2021-01-11T02:53:30,184 adding 'jcvi/annotation/pasa.py' 2021-01-11T02:53:30,186 adding 'jcvi/annotation/qc.py' 2021-01-11T02:53:30,192 adding 'jcvi/annotation/reformat.py' 2021-01-11T02:53:30,195 adding 'jcvi/annotation/stats.py' 2021-01-11T02:53:30,196 adding 'jcvi/annotation/train.py' 2021-01-11T02:53:30,199 adding 'jcvi/apps/__init__.py' 2021-01-11T02:53:30,200 adding 'jcvi/apps/__main__.py' 2021-01-11T02:53:30,202 adding 'jcvi/apps/align.py' 2021-01-11T02:53:30,211 adding 'jcvi/apps/base.py' 2021-01-11T02:53:30,214 adding 'jcvi/apps/biomart.py' 2021-01-11T02:53:30,215 adding 'jcvi/apps/blastplus.py' 2021-01-11T02:53:30,217 adding 'jcvi/apps/bowtie.py' 2021-01-11T02:53:30,219 adding 'jcvi/apps/bwa.py' 2021-01-11T02:53:30,220 adding 'jcvi/apps/cap3.py' 2021-01-11T02:53:30,222 adding 'jcvi/apps/cdhit.py' 2021-01-11T02:53:30,223 adding 'jcvi/apps/emboss.py' 2021-01-11T02:53:30,226 adding 'jcvi/apps/fetch.py' 2021-01-11T02:53:30,229 adding 'jcvi/apps/gbsubmit.py' 2021-01-11T02:53:30,231 adding 'jcvi/apps/gmap.py' 2021-01-11T02:53:30,234 adding 'jcvi/apps/grid.py' 2021-01-11T02:53:30,239 adding 'jcvi/apps/ks.py' 2021-01-11T02:53:30,240 adding 'jcvi/apps/lastz.py' 2021-01-11T02:53:30,242 adding 'jcvi/apps/mask.py' 2021-01-11T02:53:30,247 adding 'jcvi/apps/phylo.py' 2021-01-11T02:53:30,248 adding 'jcvi/apps/r.py' 2021-01-11T02:53:30,250 adding 'jcvi/apps/restriction.py' 2021-01-11T02:53:30,251 adding 'jcvi/apps/script.py' 2021-01-11T02:53:30,252 adding 'jcvi/apps/softlink.py' 2021-01-11T02:53:30,254 adding 'jcvi/apps/tesseract.py' 2021-01-11T02:53:30,259 adding 'jcvi/apps/uclust.py' 2021-01-11T02:53:30,260 adding 'jcvi/apps/uniprot.py' 2021-01-11T02:53:30,262 adding 'jcvi/apps/vecscreen.py' 2021-01-11T02:53:30,264 adding 'jcvi/assembly/__init__.py' 2021-01-11T02:53:30,265 adding 'jcvi/assembly/__main__.py' 2021-01-11T02:53:30,275 adding 'jcvi/assembly/allmaps.py' 2021-01-11T02:53:30,278 adding 'jcvi/assembly/allpaths.py' 2021-01-11T02:53:30,280 adding 'jcvi/assembly/amos.py' 2021-01-11T02:53:30,282 adding 'jcvi/assembly/automaton.py' 2021-01-11T02:53:30,285 adding 'jcvi/assembly/bambus.py' 2021-01-11T02:53:30,285 adding 'jcvi/assembly/base.py' 2021-01-11T02:53:30,290 adding 'jcvi/assembly/ca.py' 2021-01-11T02:53:30,340 adding 'jcvi/assembly/chic.cpython-37m-arm-linux-gnueabihf.so' 2021-01-11T02:53:30,342 adding 'jcvi/assembly/chic.pyx' 2021-01-11T02:53:30,344 adding 'jcvi/assembly/coverage.py' 2021-01-11T02:53:30,346 adding 'jcvi/assembly/gaps.py' 2021-01-11T02:53:30,349 adding 'jcvi/assembly/geneticmap.py' 2021-01-11T02:53:30,354 adding 'jcvi/assembly/goldenpath.py' 2021-01-11T02:53:30,363 adding 'jcvi/assembly/hic.py' 2021-01-11T02:53:30,368 adding 'jcvi/assembly/kmer.py' 2021-01-11T02:53:30,370 adding 'jcvi/assembly/meraculous.py' 2021-01-11T02:53:30,372 adding 'jcvi/assembly/opticalmap.py' 2021-01-11T02:53:30,376 adding 'jcvi/assembly/patch.py' 2021-01-11T02:53:30,378 adding 'jcvi/assembly/pbjelly.py' 2021-01-11T02:53:30,380 adding 'jcvi/assembly/postprocess.py' 2021-01-11T02:53:30,384 adding 'jcvi/assembly/preprocess.py' 2021-01-11T02:53:30,385 adding 'jcvi/assembly/sim.py' 2021-01-11T02:53:30,387 adding 'jcvi/assembly/soap.py' 2021-01-11T02:53:30,389 adding 'jcvi/assembly/sspace.py' 2021-01-11T02:53:30,392 adding 'jcvi/assembly/syntenypath.py' 2021-01-11T02:53:30,393 adding 'jcvi/assembly/trinity.py' 2021-01-11T02:53:30,401 adding 'jcvi/assembly/unitig.py' 2021-01-11T02:53:30,402 adding 'jcvi/compara/__init__.py' 2021-01-11T02:53:30,402 adding 'jcvi/compara/__main__.py' 2021-01-11T02:53:30,403 adding 'jcvi/compara/blastfilter.py' 2021-01-11T02:53:30,407 adding 'jcvi/compara/catalog.py' 2021-01-11T02:53:30,411 adding 'jcvi/compara/fractionation.py' 2021-01-11T02:53:30,413 adding 'jcvi/compara/pad.py' 2021-01-11T02:53:30,414 adding 'jcvi/compara/phylogeny.py' 2021-01-11T02:53:30,417 adding 'jcvi/compara/quota.py' 2021-01-11T02:53:30,419 adding 'jcvi/compara/reconstruct.py' 2021-01-11T02:53:30,421 adding 'jcvi/compara/synfind.py' 2021-01-11T02:53:30,430 adding 'jcvi/compara/synteny.py' 2021-01-11T02:53:30,439 adding 'jcvi/formats/__init__.py' 2021-01-11T02:53:30,440 adding 'jcvi/formats/__main__.py' 2021-01-11T02:53:30,440 adding 'jcvi/formats/ace.py' 2021-01-11T02:53:30,446 adding 'jcvi/formats/agp.py' 2021-01-11T02:53:30,451 adding 'jcvi/formats/base.py' 2021-01-11T02:53:30,461 adding 'jcvi/formats/bed.py' 2021-01-11T02:53:30,467 adding 'jcvi/formats/blast.py' 2021-01-11T02:53:30,469 adding 'jcvi/formats/btab.py' 2021-01-11T02:53:30,573 adding 'jcvi/formats/cblast.cpython-37m-arm-linux-gnueabihf.so' 2021-01-11T02:53:30,577 adding 'jcvi/formats/cblast.pyx' 2021-01-11T02:53:30,579 adding 'jcvi/formats/cdt.py' 2021-01-11T02:53:30,581 adding 'jcvi/formats/chain.py' 2021-01-11T02:53:30,582 adding 'jcvi/formats/contig.py' 2021-01-11T02:53:30,584 adding 'jcvi/formats/coords.py' 2021-01-11T02:53:30,586 adding 'jcvi/formats/excel.py' 2021-01-11T02:53:30,596 adding 'jcvi/formats/fasta.py' 2021-01-11T02:53:30,600 adding 'jcvi/formats/fastq.py' 2021-01-11T02:53:30,602 adding 'jcvi/formats/fpc.py' 2021-01-11T02:53:30,604 adding 'jcvi/formats/genbank.py' 2021-01-11T02:53:30,619 adding 'jcvi/formats/gff.py' 2021-01-11T02:53:30,622 adding 'jcvi/formats/html.py' 2021-01-11T02:53:30,623 adding 'jcvi/formats/maf.py' 2021-01-11T02:53:30,625 adding 'jcvi/formats/obo.py' 2021-01-11T02:53:30,626 adding 'jcvi/formats/paf.py' 2021-01-11T02:53:30,627 adding 'jcvi/formats/pdf.py' 2021-01-11T02:53:30,629 adding 'jcvi/formats/posmap.py' 2021-01-11T02:53:30,631 adding 'jcvi/formats/psl.py' 2021-01-11T02:53:30,632 adding 'jcvi/formats/pyblast.py' 2021-01-11T02:53:30,636 adding 'jcvi/formats/sam.py' 2021-01-11T02:53:30,638 adding 'jcvi/formats/sbt.py' 2021-01-11T02:53:30,640 adding 'jcvi/formats/sizes.py' 2021-01-11T02:53:30,643 adding 'jcvi/formats/vcf.py' 2021-01-11T02:53:30,646 adding 'jcvi/graphics/__init__.py' 2021-01-11T02:53:30,647 adding 'jcvi/graphics/__main__.py' 2021-01-11T02:53:30,649 adding 'jcvi/graphics/align.py' 2021-01-11T02:53:30,652 adding 'jcvi/graphics/assembly.py' 2021-01-11T02:53:30,656 adding 'jcvi/graphics/base.py' 2021-01-11T02:53:30,658 adding 'jcvi/graphics/blastplot.py' 2021-01-11T02:53:30,662 adding 'jcvi/graphics/chromosome.py' 2021-01-11T02:53:30,664 adding 'jcvi/graphics/coverage.py' 2021-01-11T02:53:30,666 adding 'jcvi/graphics/dotplot.py' 2021-01-11T02:53:30,669 adding 'jcvi/graphics/glyph.py' 2021-01-11T02:53:30,673 adding 'jcvi/graphics/grabseeds.py' 2021-01-11T02:53:30,674 adding 'jcvi/graphics/graph.py' 2021-01-11T02:53:30,676 adding 'jcvi/graphics/heatmap.py' 2021-01-11T02:53:30,678 adding 'jcvi/graphics/histogram.py' 2021-01-11T02:53:30,680 adding 'jcvi/graphics/karyotype.py' 2021-01-11T02:53:30,684 adding 'jcvi/graphics/landscape.py' 2021-01-11T02:53:30,686 adding 'jcvi/graphics/logo.py' 2021-01-11T02:53:30,687 adding 'jcvi/graphics/mummerplot.py' 2021-01-11T02:53:30,690 adding 'jcvi/graphics/synteny.py' 2021-01-11T02:53:30,692 adding 'jcvi/graphics/table.py' 2021-01-11T02:53:30,695 adding 'jcvi/graphics/tree.py' 2021-01-11T02:53:30,697 adding 'jcvi/graphics/wheel.py' 2021-01-11T02:53:30,698 adding 'jcvi/graphics/whisker.py' 2021-01-11T02:53:30,700 adding 'jcvi/projects/__init__.py' 2021-01-11T02:53:30,701 adding 'jcvi/projects/__main__.py' 2021-01-11T02:53:30,704 adding 'jcvi/projects/age.py' 2021-01-11T02:53:30,706 adding 'jcvi/projects/alfalfa.py' 2021-01-11T02:53:30,708 adding 'jcvi/projects/allmaps.py' 2021-01-11T02:53:30,710 adding 'jcvi/projects/bites.py' 2021-01-11T02:53:30,712 adding 'jcvi/projects/heterosis.py' 2021-01-11T02:53:30,715 adding 'jcvi/projects/ies.py' 2021-01-11T02:53:30,718 adding 'jcvi/projects/misc.py' 2021-01-11T02:53:30,722 adding 'jcvi/projects/napus.py' 2021-01-11T02:53:30,724 adding 'jcvi/projects/pineapple.py' 2021-01-11T02:53:30,726 adding 'jcvi/projects/pistachio.py' 2021-01-11T02:53:30,734 adding 'jcvi/projects/str.py' 2021-01-11T02:53:30,737 adding 'jcvi/projects/sugarcane.py' 2021-01-11T02:53:30,741 adding 'jcvi/projects/synfind.py' 2021-01-11T02:53:30,744 adding 'jcvi/projects/tgbs.py' 2021-01-11T02:53:30,746 adding 'jcvi/projects/vanilla.py' 2021-01-11T02:53:30,748 adding 'jcvi/utils/__init__.py' 2021-01-11T02:53:30,749 adding 'jcvi/utils/__main__.py' 2021-01-11T02:53:30,752 adding 'jcvi/utils/aws.py' 2021-01-11T02:53:30,755 adding 'jcvi/utils/cbook.py' 2021-01-11T02:53:30,756 adding 'jcvi/utils/console.py' 2021-01-11T02:53:30,758 adding 'jcvi/utils/db.py' 2021-01-11T02:53:30,760 adding 'jcvi/utils/ez_setup.py' 2021-01-11T02:53:30,761 adding 'jcvi/utils/grouper.py' 2021-01-11T02:53:30,763 adding 'jcvi/utils/iter.py' 2021-01-11T02:53:30,765 adding 'jcvi/utils/orderedcollections.py' 2021-01-11T02:53:30,768 adding 'jcvi/utils/range.py' 2021-01-11T02:53:30,769 adding 'jcvi/utils/table.py' 2021-01-11T02:53:30,771 adding 'jcvi/utils/taxonomy.py' 2021-01-11T02:53:30,772 adding 'jcvi/utils/webcolors.py' 2021-01-11T02:53:30,776 adding 'jcvi/utils/data/Airswing.ttf' 2021-01-11T02:53:30,794 adding 'jcvi/utils/data/Collegia.ttf' 2021-01-11T02:53:30,799 adding 'jcvi/utils/data/HookedUp.ttf' 2021-01-11T02:53:30,804 adding 'jcvi/utils/data/Humor-Sans.ttf' 2021-01-11T02:53:30,809 adding 'jcvi/utils/data/TREDs.meta.csv' 2021-01-11T02:53:30,810 adding 'jcvi/utils/data/__init__.py' 2021-01-11T02:53:30,811 adding 'jcvi/utils/data/adapters.fasta' 2021-01-11T02:53:30,813 adding 'jcvi/utils/data/blosum80.mat' 2021-01-11T02:53:30,815 adding 'jcvi/utils/data/chrY.hg38.unique_ccn.gc' 2021-01-11T02:53:30,816 adding 'jcvi/utils/data/colorchecker.txt' 2021-01-11T02:53:30,822 adding 'jcvi/utils/data/hg38.band.txt' 2021-01-11T02:53:30,825 adding 'jcvi/utils/data/hg38.chrom.sizes' 2021-01-11T02:53:30,826 adding 'jcvi/utils/data/instance.json' 2021-01-11T02:53:30,828 adding 'jcvi/variation/__init__.py' 2021-01-11T02:53:30,829 adding 'jcvi/variation/__main__.py' 2021-01-11T02:53:30,834 adding 'jcvi/variation/cnv.py' 2021-01-11T02:53:30,836 adding 'jcvi/variation/deconvolute.py' 2021-01-11T02:53:30,838 adding 'jcvi/variation/delly.py' 2021-01-11T02:53:30,840 adding 'jcvi/variation/impute.py' 2021-01-11T02:53:30,842 adding 'jcvi/variation/phase.py' 2021-01-11T02:53:30,844 adding 'jcvi/variation/snp.py' 2021-01-11T02:53:30,851 adding 'jcvi/variation/str.py' 2021-01-11T02:53:30,852 adding 'jcvi/variation/tassel.py' 2021-01-11T02:53:30,855 adding 'jcvi-1.1.5.dist-info/LICENSE' 2021-01-11T02:53:30,857 adding 'jcvi-1.1.5.dist-info/METADATA' 2021-01-11T02:53:30,858 adding 'jcvi-1.1.5.dist-info/WHEEL' 2021-01-11T02:53:30,859 adding 'jcvi-1.1.5.dist-info/top_level.txt' 2021-01-11T02:53:30,861 adding 'jcvi-1.1.5.dist-info/RECORD' 2021-01-11T02:53:30,881 removing build/bdist.linux-armv7l/wheel 2021-01-11T02:53:31,211 Building wheel for jcvi (setup.py): finished with status 'done' 2021-01-11T02:53:31,227 Created wheel for jcvi: filename=jcvi-1.1.5-cp37-cp37m-linux_armv7l.whl size=1187241 sha256=88e5cb70b3014cfcd9042fdb288f306a2aebe62dece201eaa4880a83e0334136 2021-01-11T02:53:31,228 Stored in directory: /tmp/pip-ephem-wheel-cache-hysl2llw/wheels/21/6d/ce/d1c249baae8a43e03e4aeb3766ba4db02d0f55e263b1ba36dc 2021-01-11T02:53:31,231 Successfully built jcvi 2021-01-11T02:53:31,281 Removed build tracker: '/tmp/pip-req-tracker-agtsfxz8'