2021-01-14T16:34:25,742 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-14T16:34:26,403 Created temporary directory: /tmp/pip-ephem-wheel-cache-8mf_6vjl
2021-01-14T16:34:26,407 Created temporary directory: /tmp/pip-req-tracker-4z2n0dii
2021-01-14T16:34:26,408 Initialized build tracking at /tmp/pip-req-tracker-4z2n0dii
2021-01-14T16:34:26,408 Created build tracker: /tmp/pip-req-tracker-4z2n0dii
2021-01-14T16:34:26,408 Entered build tracker: /tmp/pip-req-tracker-4z2n0dii
2021-01-14T16:34:26,410 Created temporary directory: /tmp/pip-wheel-torievwv
2021-01-14T16:34:26,426 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2021-01-14T16:34:26,428 2 location(s) to search for versions of ultra-bioinformatics:
2021-01-14T16:34:26,428 * https://pypi.org/simple/ultra-bioinformatics/
2021-01-14T16:34:26,428 * https://pypi.ngc.nvidia.com/ultra-bioinformatics/
2021-01-14T16:34:26,429 Fetching project page and analyzing links: https://pypi.org/simple/ultra-bioinformatics/
2021-01-14T16:34:26,431 Getting page https://pypi.org/simple/ultra-bioinformatics/
2021-01-14T16:34:26,434 Found index url https://pypi.org/simple
2021-01-14T16:34:26,736   Found link https://files.pythonhosted.org/packages/65/29/65df1f02482f26455e91116a925a37bc462f3661f2974c1876d0b33d8c08/ultra_bioinformatics-0.0.1.tar.gz#sha256=a4e61a998acdde447ba08aa6e43845ac44e27466e38032739c016a6f29972b2a (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.1
2021-01-14T16:34:26,740   Found link https://files.pythonhosted.org/packages/5f/43/f6a6c124ffb15a523e4a9b3feb91d28c60cb49478e4a8d308baea169a489/ultra_bioinformatics-0.0.2.tar.gz#sha256=fa4c15927e73e25d98ce7884765ce5af26986cd646a1162d840d9e019cbd66e3 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2
2021-01-14T16:34:26,744   Found link https://files.pythonhosted.org/packages/6a/58/a30039878dcb4bb59cdbeba01097be3820098a63a1310549f222810f085d/ultra_bioinformatics-0.0.2.1.tar.gz#sha256=4efc237f9759fe47808c22c1ee564412edf39c3dc21b0aa6b2af74009d2d64a7 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.1
2021-01-14T16:34:26,747   Found link https://files.pythonhosted.org/packages/63/eb/35e910e857d69319193e83b7597015c0db24697a23d5c54908b01faaf0db/ultra_bioinformatics-0.0.2.2.tar.gz#sha256=7557c1f0137b290c24bbf5a3255f028c5c26ab03aa14264d0cf7aa0a20499818 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.2
2021-01-14T16:34:26,748 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/ultra-bioinformatics/
2021-01-14T16:34:26,749 Getting page https://pypi.ngc.nvidia.com/ultra-bioinformatics/
2021-01-14T16:34:26,752 Found index url https://pypi.ngc.nvidia.com
2021-01-14T16:34:27,435 Could not fetch URL https://pypi.ngc.nvidia.com/ultra-bioinformatics/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/ultra-bioinformatics/ - skipping
2021-01-14T16:34:27,454 Given no hashes to check 1 links for project 'ultra-bioinformatics': discarding no candidates
2021-01-14T16:34:27,457 Using version 0.0.2.2 (newest of versions: 0.0.2.2)
2021-01-14T16:34:27,467 Collecting ultra-bioinformatics==0.0.2.2
2021-01-14T16:34:27,471   Created temporary directory: /tmp/pip-unpack-wgu1cjkh
2021-01-14T16:34:27,689   Downloading ultra_bioinformatics-0.0.2.2.tar.gz (53 kB)
2021-01-14T16:34:27,829   Added ultra-bioinformatics==0.0.2.2 from https://files.pythonhosted.org/packages/63/eb/35e910e857d69319193e83b7597015c0db24697a23d5c54908b01faaf0db/ultra_bioinformatics-0.0.2.2.tar.gz#sha256=7557c1f0137b290c24bbf5a3255f028c5c26ab03aa14264d0cf7aa0a20499818 to build tracker '/tmp/pip-req-tracker-4z2n0dii'
2021-01-14T16:34:27,831     Running setup.py (path:/tmp/pip-wheel-torievwv/ultra-bioinformatics/setup.py) egg_info for package ultra-bioinformatics
2021-01-14T16:34:27,832     Created temporary directory: /tmp/pip-pip-egg-info-j9cbw534
2021-01-14T16:34:27,833     Running command python setup.py egg_info
2021-01-14T16:34:29,905     running egg_info
2021-01-14T16:34:29,912     creating /tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info
2021-01-14T16:34:29,913     writing /tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info/PKG-INFO
2021-01-14T16:34:29,919     writing dependency_links to /tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info/dependency_links.txt
2021-01-14T16:34:29,920     writing top-level names to /tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info/top_level.txt
2021-01-14T16:34:29,923     writing requirements to /tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info/requires.txt
2021-01-14T16:34:29,926     writing manifest file '/tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T16:34:30,240     reading manifest file '/tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T16:34:30,247     writing manifest file '/tmp/pip-pip-egg-info-j9cbw534/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T16:34:30,380   Source in /tmp/pip-wheel-torievwv/ultra-bioinformatics has version 0.0.2.2, which satisfies requirement ultra-bioinformatics==0.0.2.2 from https://files.pythonhosted.org/packages/63/eb/35e910e857d69319193e83b7597015c0db24697a23d5c54908b01faaf0db/ultra_bioinformatics-0.0.2.2.tar.gz#sha256=7557c1f0137b290c24bbf5a3255f028c5c26ab03aa14264d0cf7aa0a20499818
2021-01-14T16:34:30,381   Removed ultra-bioinformatics==0.0.2.2 from https://files.pythonhosted.org/packages/63/eb/35e910e857d69319193e83b7597015c0db24697a23d5c54908b01faaf0db/ultra_bioinformatics-0.0.2.2.tar.gz#sha256=7557c1f0137b290c24bbf5a3255f028c5c26ab03aa14264d0cf7aa0a20499818 from build tracker '/tmp/pip-req-tracker-4z2n0dii'
2021-01-14T16:34:30,390 Building wheels for collected packages: ultra-bioinformatics
2021-01-14T16:34:30,396   Created temporary directory: /tmp/pip-wheel-qnle2rsv
2021-01-14T16:34:30,397   Building wheel for ultra-bioinformatics (setup.py): started
2021-01-14T16:34:30,397   Destination directory: /tmp/pip-wheel-qnle2rsv
2021-01-14T16:34:30,398   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-torievwv/ultra-bioinformatics/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-torievwv/ultra-bioinformatics/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-qnle2rsv
2021-01-14T16:34:32,501   running bdist_wheel
2021-01-14T16:34:32,516   running build
2021-01-14T16:34:32,517   running build_py
2021-01-14T16:34:32,815   creating build
2021-01-14T16:34:32,816   creating build/lib
2021-01-14T16:34:32,818   creating build/lib/modules
2021-01-14T16:34:32,821   copying modules/help_functions.py -> build/lib/modules
2021-01-14T16:34:32,826   copying modules/colinear_solver.py -> build/lib/modules
2021-01-14T16:34:32,831   copying modules/range_query_max_search_tree.py -> build/lib/modules
2021-01-14T16:34:32,836   copying modules/create_augmented_gene.py -> build/lib/modules
2021-01-14T16:34:32,842   copying modules/prefilter_genomic_reads.py -> build/lib/modules
2021-01-14T16:34:32,848   copying modules/__init__.py -> build/lib/modules
2021-01-14T16:34:32,853   copying modules/sam_output.py -> build/lib/modules
2021-01-14T16:34:32,860   copying modules/classify_alignment2.py -> build/lib/modules
2021-01-14T16:34:32,864   copying modules/classify_read_with_mams.py -> build/lib/modules
2021-01-14T16:34:32,870   copying modules/mem_wrapper.py -> build/lib/modules
2021-01-14T16:34:32,874   copying modules/align.py -> build/lib/modules
2021-01-14T16:34:32,882   running build_scripts
2021-01-14T16:34:32,883   creating build/scripts-3.5
2021-01-14T16:34:32,887   copying and adjusting uLTRA -> build/scripts-3.5
2021-01-14T16:34:32,892   changing mode of build/scripts-3.5/uLTRA from 644 to 755
2021-01-14T16:34:32,900   installing to build/bdist.linux-armv7l/wheel
2021-01-14T16:34:32,901   running install
2021-01-14T16:34:32,904   running install_lib
2021-01-14T16:34:32,912   creating build/bdist.linux-armv7l
2021-01-14T16:34:32,914   creating build/bdist.linux-armv7l/wheel
2021-01-14T16:34:32,917   creating build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,920   copying build/lib/modules/help_functions.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,925   copying build/lib/modules/colinear_solver.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,930   copying build/lib/modules/range_query_max_search_tree.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,934   copying build/lib/modules/create_augmented_gene.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,939   copying build/lib/modules/prefilter_genomic_reads.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,943   copying build/lib/modules/__init__.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,945   copying build/lib/modules/sam_output.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,949   copying build/lib/modules/classify_alignment2.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,953   copying build/lib/modules/classify_read_with_mams.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,958   copying build/lib/modules/mem_wrapper.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,962   copying build/lib/modules/align.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T16:34:32,969   running install_egg_info
2021-01-14T16:34:33,015   running egg_info
2021-01-14T16:34:33,016   writing dependency_links to ultra_bioinformatics.egg-info/dependency_links.txt
2021-01-14T16:34:33,019   writing top-level names to ultra_bioinformatics.egg-info/top_level.txt
2021-01-14T16:34:33,020   writing ultra_bioinformatics.egg-info/PKG-INFO
2021-01-14T16:34:33,024   writing requirements to ultra_bioinformatics.egg-info/requires.txt
2021-01-14T16:34:33,034   reading manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T16:34:33,043   writing manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T16:34:33,045   Copying ultra_bioinformatics.egg-info to build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.2-py3.5.egg-info
2021-01-14T16:34:33,063   running install_scripts
2021-01-14T16:34:33,183   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.2.data
2021-01-14T16:34:33,184   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.2.data/scripts
2021-01-14T16:34:33,186   copying build/scripts-3.5/uLTRA -> build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.2.data/scripts
2021-01-14T16:34:33,191   changing mode of build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.2.data/scripts/uLTRA to 755
2021-01-14T16:34:33,249   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.2.dist-info/WHEEL
2021-01-14T16:34:33,490   Building wheel for ultra-bioinformatics (setup.py): finished with status 'done'
2021-01-14T16:34:33,494   Created wheel for ultra-bioinformatics: filename=ultra_bioinformatics-0.0.2.2-py3-none-any.whl size=56735 sha256=16d8a733cfafd30faec3aec067ae69e38c6b94680cb812a3e3c5be2437a91b55
2021-01-14T16:34:33,495   Stored in directory: /tmp/pip-ephem-wheel-cache-8mf_6vjl/wheels/7f/80/47/a61577377c4122fe02cc16f058d056c9c7a62aada3fef5bfa8
2021-01-14T16:34:33,498 Successfully built ultra-bioinformatics
2021-01-14T16:34:33,634 Removed build tracker: '/tmp/pip-req-tracker-4z2n0dii'