2021-01-14T18:25:04,857 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-14T18:25:05,530 Created temporary directory: /tmp/pip-ephem-wheel-cache-xxvaq0_7
2021-01-14T18:25:05,535 Created temporary directory: /tmp/pip-req-tracker-1vaqdes3
2021-01-14T18:25:05,536 Initialized build tracking at /tmp/pip-req-tracker-1vaqdes3
2021-01-14T18:25:05,536 Created build tracker: /tmp/pip-req-tracker-1vaqdes3
2021-01-14T18:25:05,537 Entered build tracker: /tmp/pip-req-tracker-1vaqdes3
2021-01-14T18:25:05,538 Created temporary directory: /tmp/pip-wheel-9uumoe33
2021-01-14T18:25:05,554 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2021-01-14T18:25:05,556 2 location(s) to search for versions of ultra-bioinformatics:
2021-01-14T18:25:05,556 * https://pypi.org/simple/ultra-bioinformatics/
2021-01-14T18:25:05,556 * https://pypi.ngc.nvidia.com/ultra-bioinformatics/
2021-01-14T18:25:05,557 Fetching project page and analyzing links: https://pypi.org/simple/ultra-bioinformatics/
2021-01-14T18:25:05,559 Getting page https://pypi.org/simple/ultra-bioinformatics/
2021-01-14T18:25:05,563 Found index url https://pypi.org/simple
2021-01-14T18:25:05,885   Found link https://files.pythonhosted.org/packages/65/29/65df1f02482f26455e91116a925a37bc462f3661f2974c1876d0b33d8c08/ultra_bioinformatics-0.0.1.tar.gz#sha256=a4e61a998acdde447ba08aa6e43845ac44e27466e38032739c016a6f29972b2a (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.1
2021-01-14T18:25:05,888   Found link https://files.pythonhosted.org/packages/5f/43/f6a6c124ffb15a523e4a9b3feb91d28c60cb49478e4a8d308baea169a489/ultra_bioinformatics-0.0.2.tar.gz#sha256=fa4c15927e73e25d98ce7884765ce5af26986cd646a1162d840d9e019cbd66e3 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2
2021-01-14T18:25:05,891   Found link https://files.pythonhosted.org/packages/6a/58/a30039878dcb4bb59cdbeba01097be3820098a63a1310549f222810f085d/ultra_bioinformatics-0.0.2.1.tar.gz#sha256=4efc237f9759fe47808c22c1ee564412edf39c3dc21b0aa6b2af74009d2d64a7 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.1
2021-01-14T18:25:05,895   Found link https://files.pythonhosted.org/packages/63/eb/35e910e857d69319193e83b7597015c0db24697a23d5c54908b01faaf0db/ultra_bioinformatics-0.0.2.2.tar.gz#sha256=7557c1f0137b290c24bbf5a3255f028c5c26ab03aa14264d0cf7aa0a20499818 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.2
2021-01-14T18:25:05,898   Found link https://files.pythonhosted.org/packages/24/c0/bf7ee45736b40edc7ef301675d1399fe7dfa4caa2232851353b163e8669e/ultra_bioinformatics-0.0.2.3.tar.gz#sha256=a9686a3fafee9539aff6728667008e892f4a5acdf9558edfb48b7f2fdf8fc2b4 (from https://pypi.org/simple/ultra-bioinformatics/) (requires-python:!=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, <4), version: 0.0.2.3
2021-01-14T18:25:05,898 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/ultra-bioinformatics/
2021-01-14T18:25:05,899 Getting page https://pypi.ngc.nvidia.com/ultra-bioinformatics/
2021-01-14T18:25:05,902 Found index url https://pypi.ngc.nvidia.com
2021-01-14T18:25:06,561 Could not fetch URL https://pypi.ngc.nvidia.com/ultra-bioinformatics/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/ultra-bioinformatics/ - skipping
2021-01-14T18:25:06,581 Given no hashes to check 1 links for project 'ultra-bioinformatics': discarding no candidates
2021-01-14T18:25:06,583 Using version 0.0.2.3 (newest of versions: 0.0.2.3)
2021-01-14T18:25:06,591 Collecting ultra-bioinformatics==0.0.2.3
2021-01-14T18:25:06,596   Created temporary directory: /tmp/pip-unpack-j5ypcfq4
2021-01-14T18:25:06,830   Downloading ultra_bioinformatics-0.0.2.3.tar.gz (54 kB)
2021-01-14T18:25:07,027   Added ultra-bioinformatics==0.0.2.3 from https://files.pythonhosted.org/packages/24/c0/bf7ee45736b40edc7ef301675d1399fe7dfa4caa2232851353b163e8669e/ultra_bioinformatics-0.0.2.3.tar.gz#sha256=a9686a3fafee9539aff6728667008e892f4a5acdf9558edfb48b7f2fdf8fc2b4 to build tracker '/tmp/pip-req-tracker-1vaqdes3'
2021-01-14T18:25:07,030     Running setup.py (path:/tmp/pip-wheel-9uumoe33/ultra-bioinformatics/setup.py) egg_info for package ultra-bioinformatics
2021-01-14T18:25:07,033     Created temporary directory: /tmp/pip-pip-egg-info-yy2uwc51
2021-01-14T18:25:07,034     Running command python setup.py egg_info
2021-01-14T18:25:09,287     running egg_info
2021-01-14T18:25:09,293     creating /tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info
2021-01-14T18:25:09,295     writing /tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info/PKG-INFO
2021-01-14T18:25:09,303     writing top-level names to /tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info/top_level.txt
2021-01-14T18:25:09,305     writing requirements to /tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info/requires.txt
2021-01-14T18:25:09,308     writing dependency_links to /tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info/dependency_links.txt
2021-01-14T18:25:09,312     writing manifest file '/tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T18:25:09,688     reading manifest file '/tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T18:25:09,697     writing manifest file '/tmp/pip-pip-egg-info-yy2uwc51/ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T18:25:09,836   Source in /tmp/pip-wheel-9uumoe33/ultra-bioinformatics has version 0.0.2.3, which satisfies requirement ultra-bioinformatics==0.0.2.3 from https://files.pythonhosted.org/packages/24/c0/bf7ee45736b40edc7ef301675d1399fe7dfa4caa2232851353b163e8669e/ultra_bioinformatics-0.0.2.3.tar.gz#sha256=a9686a3fafee9539aff6728667008e892f4a5acdf9558edfb48b7f2fdf8fc2b4
2021-01-14T18:25:09,837   Removed ultra-bioinformatics==0.0.2.3 from https://files.pythonhosted.org/packages/24/c0/bf7ee45736b40edc7ef301675d1399fe7dfa4caa2232851353b163e8669e/ultra_bioinformatics-0.0.2.3.tar.gz#sha256=a9686a3fafee9539aff6728667008e892f4a5acdf9558edfb48b7f2fdf8fc2b4 from build tracker '/tmp/pip-req-tracker-1vaqdes3'
2021-01-14T18:25:09,847 Building wheels for collected packages: ultra-bioinformatics
2021-01-14T18:25:09,856   Created temporary directory: /tmp/pip-wheel-bcduwz1k
2021-01-14T18:25:09,857   Building wheel for ultra-bioinformatics (setup.py): started
2021-01-14T18:25:09,857   Destination directory: /tmp/pip-wheel-bcduwz1k
2021-01-14T18:25:09,858   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9uumoe33/ultra-bioinformatics/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9uumoe33/ultra-bioinformatics/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bcduwz1k
2021-01-14T18:25:12,127   running bdist_wheel
2021-01-14T18:25:12,142   running build
2021-01-14T18:25:12,143   running build_py
2021-01-14T18:25:12,489   creating build
2021-01-14T18:25:12,490   creating build/lib
2021-01-14T18:25:12,509   creating build/lib/modules
2021-01-14T18:25:12,513   copying modules/align.py -> build/lib/modules
2021-01-14T18:25:12,524   copying modules/mem_wrapper.py -> build/lib/modules
2021-01-14T18:25:12,532   copying modules/prefilter_genomic_reads.py -> build/lib/modules
2021-01-14T18:25:12,539   copying modules/sam_output.py -> build/lib/modules
2021-01-14T18:25:12,546   copying modules/classify_alignment2.py -> build/lib/modules
2021-01-14T18:25:12,552   copying modules/range_query_max_search_tree.py -> build/lib/modules
2021-01-14T18:25:12,560   copying modules/create_augmented_gene.py -> build/lib/modules
2021-01-14T18:25:12,569   copying modules/colinear_solver.py -> build/lib/modules
2021-01-14T18:25:12,578   copying modules/help_functions.py -> build/lib/modules
2021-01-14T18:25:12,585   copying modules/classify_read_with_mams.py -> build/lib/modules
2021-01-14T18:25:12,594   copying modules/__init__.py -> build/lib/modules
2021-01-14T18:25:12,602   running build_scripts
2021-01-14T18:25:12,604   creating build/scripts-3.5
2021-01-14T18:25:12,607   copying and adjusting uLTRA -> build/scripts-3.5
2021-01-14T18:25:12,615   changing mode of build/scripts-3.5/uLTRA from 644 to 755
2021-01-14T18:25:12,622   installing to build/bdist.linux-armv7l/wheel
2021-01-14T18:25:12,623   running install
2021-01-14T18:25:12,624   running install_lib
2021-01-14T18:25:12,633   creating build/bdist.linux-armv7l
2021-01-14T18:25:12,634   creating build/bdist.linux-armv7l/wheel
2021-01-14T18:25:12,639   creating build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,641   copying build/lib/modules/align.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,651   copying build/lib/modules/mem_wrapper.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,657   copying build/lib/modules/prefilter_genomic_reads.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,663   copying build/lib/modules/sam_output.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,669   copying build/lib/modules/classify_alignment2.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,675   copying build/lib/modules/range_query_max_search_tree.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,683   copying build/lib/modules/create_augmented_gene.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,692   copying build/lib/modules/colinear_solver.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,700   copying build/lib/modules/help_functions.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,707   copying build/lib/modules/classify_read_with_mams.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,717   copying build/lib/modules/__init__.py -> build/bdist.linux-armv7l/wheel/modules
2021-01-14T18:25:12,721   running install_egg_info
2021-01-14T18:25:12,770   running egg_info
2021-01-14T18:25:12,771   writing dependency_links to ultra_bioinformatics.egg-info/dependency_links.txt
2021-01-14T18:25:12,774   writing top-level names to ultra_bioinformatics.egg-info/top_level.txt
2021-01-14T18:25:12,777   writing ultra_bioinformatics.egg-info/PKG-INFO
2021-01-14T18:25:12,783   writing requirements to ultra_bioinformatics.egg-info/requires.txt
2021-01-14T18:25:12,797   reading manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T18:25:12,813   writing manifest file 'ultra_bioinformatics.egg-info/SOURCES.txt'
2021-01-14T18:25:12,816   Copying ultra_bioinformatics.egg-info to build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.3-py3.5.egg-info
2021-01-14T18:25:12,846   running install_scripts
2021-01-14T18:25:12,987   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.3.data
2021-01-14T18:25:12,989   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.3.data/scripts
2021-01-14T18:25:12,991   copying build/scripts-3.5/uLTRA -> build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.3.data/scripts
2021-01-14T18:25:12,998   changing mode of build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.3.data/scripts/uLTRA to 755
2021-01-14T18:25:13,071   creating build/bdist.linux-armv7l/wheel/ultra_bioinformatics-0.0.2.3.dist-info/WHEEL
2021-01-14T18:25:13,357   Building wheel for ultra-bioinformatics (setup.py): finished with status 'done'
2021-01-14T18:25:13,362   Created wheel for ultra-bioinformatics: filename=ultra_bioinformatics-0.0.2.3-py3-none-any.whl size=56999 sha256=236c0338e618c39d4e9955ab76964fa9645c99beb20648661ac6910545d7f25a
2021-01-14T18:25:13,363   Stored in directory: /tmp/pip-ephem-wheel-cache-xxvaq0_7/wheels/c4/bd/83/c6a8c44a4493f9ce35d7b769bb52523b75ad0df98082931751
2021-01-14T18:25:13,367 Successfully built ultra-bioinformatics
2021-01-14T18:25:13,384 Removed build tracker: '/tmp/pip-req-tracker-1vaqdes3'