2021-01-18T18:55:28,437 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-18T18:55:29,173 Created temporary directory: /tmp/pip-ephem-wheel-cache-0xq7b7gw
2021-01-18T18:55:29,177 Created temporary directory: /tmp/pip-req-tracker-bk5hjg0w
2021-01-18T18:55:29,178 Initialized build tracking at /tmp/pip-req-tracker-bk5hjg0w
2021-01-18T18:55:29,179 Created build tracker: /tmp/pip-req-tracker-bk5hjg0w
2021-01-18T18:55:29,179 Entered build tracker: /tmp/pip-req-tracker-bk5hjg0w
2021-01-18T18:55:29,181 Created temporary directory: /tmp/pip-wheel-gq6j94s0
2021-01-18T18:55:29,198 1 location(s) to search for versions of rcsb-utils-chem:
2021-01-18T18:55:29,198 * https://pypi.org/simple/rcsb-utils-chem/
2021-01-18T18:55:29,199 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/
2021-01-18T18:55:29,201 Getting page https://pypi.org/simple/rcsb-utils-chem/
2021-01-18T18:55:29,205 Found index url https://pypi.org/simple
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2021-01-18T18:55:29,664   Found link https://files.pythonhosted.org/packages/23/70/31a548e2597ba4673b3175b995e181b623e4c747e37c17df2ca582254f55/rcsb.utils.chem-0.39.tar.gz#sha256=3dc0a2b82a1f87025a5ade1c79734ec98a51edd9c33dfeaac7e9bd53050c8887 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.39
2021-01-18T18:55:29,665   Found link https://files.pythonhosted.org/packages/16/1d/3890ea594852c3e66b9477c5f63add9d5581117f98a32c05ee3cd9e66f86/rcsb.utils.chem-0.40-py2.py3-none-any.whl#sha256=18e628af1e06a49c78f2dc312c9e3609ef21667559f6208788ae735952ebbfe5 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.40
2021-01-18T18:55:29,666   Found link https://files.pythonhosted.org/packages/ae/6e/b68046b1cc8f0f7c3f462d2591ec63061e8fb6cd17ab41bab3d60661b792/rcsb.utils.chem-0.40.tar.gz#sha256=dfb8d44085326ad310fb773c776317420b592bf63a8b449381bf79293ff0479b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.40
2021-01-18T18:55:29,667   Found link https://files.pythonhosted.org/packages/32/55/ef2b128f8fb60a0b8ca1c7c8ee2ef5925b52664e8a2eb04271c26f45b4be/rcsb.utils.chem-0.41-py2.py3-none-any.whl#sha256=17437217dd8bbabf4ed399a27a647a0cd53405037966e0e4322ac90994abf505 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2021-01-18T18:55:29,668   Found link https://files.pythonhosted.org/packages/66/e5/53afaa02860c8eff39ff2c8931ced37f4ff2c3f53ec2e39d6dde071bdeb6/rcsb.utils.chem-0.41.tar.gz#sha256=af8a785c4b421d96cc12558add6109fbf1d4214c8b3973cbe66e9f027ca962c2 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2021-01-18T18:55:29,669   Found link https://files.pythonhosted.org/packages/48/b4/e4302c54cb810233dc0fd8b98be5e0fc89e5fc8b6a7f3bcdd12897efacf1/rcsb.utils.chem-0.42.tar.gz#sha256=f4d0f409dff8510e5193127c0da4882443860ee4e4084ac9a5ecc6ecdf2d9e74 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.42
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2021-01-18T18:55:29,671   Found link https://files.pythonhosted.org/packages/d0/0c/25539acbdf220d74a65ee9aaffb83f8a4c0749ba894816cb95efc6f993e6/rcsb.utils.chem-0.45.tar.gz#sha256=5965c277172093334642bb339cbdcfeabf97229d9e04600698b15cdca2e0490b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.45
2021-01-18T18:55:29,672   Found link https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.46
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2021-01-18T18:55:29,674   Found link https://files.pythonhosted.org/packages/bd/f2/5d8c5d0ca3a095766c61bc5c4169602742c471eccc53604d982703d594ef/rcsb.utils.chem-0.48.tar.gz#sha256=02aaab58565423a96fa75152bea9969a1014a9c882583f870c4860f1b9bbe846 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.48
2021-01-18T18:55:29,675   Found link https://files.pythonhosted.org/packages/2d/fa/83ed67ebbc2d799544945296fe90b48c45cd6d563a3ddb73f9ef6bd13629/rcsb.utils.chem-0.49.tar.gz#sha256=3b44fa091076acb53a1730442b3873016bb9cb612129e73223d80adb4b41c7b1 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.49
2021-01-18T18:55:29,704 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates
2021-01-18T18:55:29,707 Using version 0.49 (newest of versions: 0.49)
2021-01-18T18:55:29,716 Collecting rcsb-utils-chem==0.49
2021-01-18T18:55:29,721   Created temporary directory: /tmp/pip-unpack-_odi69o_
2021-01-18T18:55:29,952   Downloading rcsb.utils.chem-0.49.tar.gz (71 kB)
2021-01-18T18:55:30,301   Added rcsb-utils-chem==0.49 from https://files.pythonhosted.org/packages/2d/fa/83ed67ebbc2d799544945296fe90b48c45cd6d563a3ddb73f9ef6bd13629/rcsb.utils.chem-0.49.tar.gz#sha256=3b44fa091076acb53a1730442b3873016bb9cb612129e73223d80adb4b41c7b1 to build tracker '/tmp/pip-req-tracker-bk5hjg0w'
2021-01-18T18:55:30,304     Running setup.py (path:/tmp/pip-wheel-gq6j94s0/rcsb-utils-chem/setup.py) egg_info for package rcsb-utils-chem
2021-01-18T18:55:30,307     Created temporary directory: /tmp/pip-pip-egg-info-u9zxywbs
2021-01-18T18:55:30,308     Running command python setup.py egg_info
2021-01-18T18:55:32,802     running egg_info
2021-01-18T18:55:32,807     creating /tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info
2021-01-18T18:55:32,810     writing entry points to /tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/entry_points.txt
2021-01-18T18:55:32,814     writing requirements to /tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/requires.txt
2021-01-18T18:55:32,816     writing /tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/PKG-INFO
2021-01-18T18:55:32,821     writing top-level names to /tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/top_level.txt
2021-01-18T18:55:32,824     writing dependency_links to /tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/dependency_links.txt
2021-01-18T18:55:32,828     writing manifest file '/tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-18T18:55:33,202     reading manifest file '/tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-18T18:55:33,206     reading manifest template 'MANIFEST.in'
2021-01-18T18:55:33,215     writing manifest file '/tmp/pip-pip-egg-info-u9zxywbs/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-18T18:55:33,356   Source in /tmp/pip-wheel-gq6j94s0/rcsb-utils-chem has version 0.49, which satisfies requirement rcsb-utils-chem==0.49 from https://files.pythonhosted.org/packages/2d/fa/83ed67ebbc2d799544945296fe90b48c45cd6d563a3ddb73f9ef6bd13629/rcsb.utils.chem-0.49.tar.gz#sha256=3b44fa091076acb53a1730442b3873016bb9cb612129e73223d80adb4b41c7b1
2021-01-18T18:55:33,358   Removed rcsb-utils-chem==0.49 from https://files.pythonhosted.org/packages/2d/fa/83ed67ebbc2d799544945296fe90b48c45cd6d563a3ddb73f9ef6bd13629/rcsb.utils.chem-0.49.tar.gz#sha256=3b44fa091076acb53a1730442b3873016bb9cb612129e73223d80adb4b41c7b1 from build tracker '/tmp/pip-req-tracker-bk5hjg0w'
2021-01-18T18:55:33,361 Building wheels for collected packages: rcsb-utils-chem
2021-01-18T18:55:33,370   Created temporary directory: /tmp/pip-wheel-1zrf5t44
2021-01-18T18:55:33,371   Building wheel for rcsb-utils-chem (setup.py): started
2021-01-18T18:55:33,372   Destination directory: /tmp/pip-wheel-1zrf5t44
2021-01-18T18:55:33,372   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-gq6j94s0/rcsb-utils-chem/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-gq6j94s0/rcsb-utils-chem/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1zrf5t44
2021-01-18T18:55:35,808   running bdist_wheel
2021-01-18T18:55:35,825   running build
2021-01-18T18:55:35,826   running build_py
2021-01-18T18:55:36,163   creating build
2021-01-18T18:55:36,164   creating build/lib
2021-01-18T18:55:36,165   creating build/lib/rcsb
2021-01-18T18:55:36,168   copying rcsb/__init__.py -> build/lib/rcsb
2021-01-18T18:55:36,174   creating build/lib/rcsb/utils
2021-01-18T18:55:36,176   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2021-01-18T18:55:36,184   creating build/lib/rcsb/utils/chem
2021-01-18T18:55:36,186   copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,192   copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,202   copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,208   copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,215   copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,225   copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,232   copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,239   copying rcsb/utils/chem/OeChemCompUtils.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,245   copying rcsb/utils/chem/OeMcssSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,251   copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,256   copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,271   copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,278   copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,283   copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,291   copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,297   copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,305   copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,313   copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,320   copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,327   copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,334   copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,341   copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,350   copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,357   copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,365   copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,371   copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,377   copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem
2021-01-18T18:55:36,414   installing to build/bdist.linux-armv7l/wheel
2021-01-18T18:55:36,415   running install
2021-01-18T18:55:36,417   running install_lib
2021-01-18T18:55:36,425   creating build/bdist.linux-armv7l
2021-01-18T18:55:36,426   creating build/bdist.linux-armv7l/wheel
2021-01-18T18:55:36,429   creating build/bdist.linux-armv7l/wheel/rcsb
2021-01-18T18:55:36,433   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-18T18:55:36,437   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,439   copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,446   copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,457   copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,463   copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,468   copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,479   copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,485   copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,493   copying build/lib/rcsb/utils/chem/OeChemCompUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,501   copying build/lib/rcsb/utils/chem/OeMcssSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,508   copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,515   copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,530   copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,538   copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,543   copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,551   copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,558   copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,566   copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,573   copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,581   copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,587   copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,594   copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,601   copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,610   copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,618   copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,625   copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,633   copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,639   copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-18T18:55:36,649   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-18T18:55:36,655   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2021-01-18T18:55:36,660   running install_egg_info
2021-01-18T18:55:36,708   running egg_info
2021-01-18T18:55:36,711   writing requirements to rcsb.utils.chem.egg-info/requires.txt
2021-01-18T18:55:36,714   writing entry points to rcsb.utils.chem.egg-info/entry_points.txt
2021-01-18T18:55:36,716   writing rcsb.utils.chem.egg-info/PKG-INFO
2021-01-18T18:55:36,720   writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt
2021-01-18T18:55:36,723   writing top-level names to rcsb.utils.chem.egg-info/top_level.txt
2021-01-18T18:55:36,737   reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-18T18:55:36,742   reading manifest template 'MANIFEST.in'
2021-01-18T18:55:36,752   writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-18T18:55:36,756   Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.49-py3.5.egg-info
2021-01-18T18:55:36,793   running install_scripts
2021-01-18T18:55:36,999   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.49.dist-info/WHEEL
2021-01-18T18:55:37,385   Building wheel for rcsb-utils-chem (setup.py): finished with status 'done'
2021-01-18T18:55:37,391   Created wheel for rcsb-utils-chem: filename=rcsb.utils.chem-0.49-py2.py3-none-any.whl size=89735 sha256=65b4a0357d99abb30933796712f8ed8ee99466684e68c2138e61610066eb6b90
2021-01-18T18:55:37,392   Stored in directory: /tmp/pip-ephem-wheel-cache-0xq7b7gw/wheels/85/38/5a/346734f12f9bf181e936148d666f1cbccb8561824e190d3399
2021-01-18T18:55:37,396 Successfully built rcsb-utils-chem
2021-01-18T18:55:37,419 Removed build tracker: '/tmp/pip-req-tracker-bk5hjg0w'