2021-01-18T21:42:59,194 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-18T21:42:59,928 Created temporary directory: /tmp/pip-ephem-wheel-cache-ek0b1j03
2021-01-18T21:42:59,933 Created temporary directory: /tmp/pip-req-tracker-7bz17i9d
2021-01-18T21:42:59,934 Initialized build tracking at /tmp/pip-req-tracker-7bz17i9d
2021-01-18T21:42:59,935 Created build tracker: /tmp/pip-req-tracker-7bz17i9d
2021-01-18T21:42:59,935 Entered build tracker: /tmp/pip-req-tracker-7bz17i9d
2021-01-18T21:42:59,937 Created temporary directory: /tmp/pip-wheel-3w41t3d9
2021-01-18T21:42:59,953 1 location(s) to search for versions of vivarium-bioscrape:
2021-01-18T21:42:59,953 * https://pypi.org/simple/vivarium-bioscrape/
2021-01-18T21:42:59,954 Fetching project page and analyzing links: https://pypi.org/simple/vivarium-bioscrape/
2021-01-18T21:42:59,956 Getting page https://pypi.org/simple/vivarium-bioscrape/
2021-01-18T21:42:59,960 Found index url https://pypi.org/simple
2021-01-18T21:43:00,303   Found link https://files.pythonhosted.org/packages/5a/a3/a3544cfaa9ce666046aaabfb4d94c344e1e8df4d85fc6a458ee46f564ee6/vivarium-bioscrape-0.0.0.1.tar.gz#sha256=06ba5e1f892818797ba19650625952a313f8c0c7f429ce83b62c035f56a51368 (from https://pypi.org/simple/vivarium-bioscrape/), version: 0.0.0.1
2021-01-18T21:43:00,313 Given no hashes to check 1 links for project 'vivarium-bioscrape': discarding no candidates
2021-01-18T21:43:00,315 Using version 0.0.0.1 (newest of versions: 0.0.0.1)
2021-01-18T21:43:00,323 Collecting vivarium-bioscrape==0.0.0.1
2021-01-18T21:43:00,328   Created temporary directory: /tmp/pip-unpack-q7300dii
2021-01-18T21:43:00,553   Downloading vivarium-bioscrape-0.0.0.1.tar.gz (13 kB)
2021-01-18T21:43:00,701   Added vivarium-bioscrape==0.0.0.1 from https://files.pythonhosted.org/packages/5a/a3/a3544cfaa9ce666046aaabfb4d94c344e1e8df4d85fc6a458ee46f564ee6/vivarium-bioscrape-0.0.0.1.tar.gz#sha256=06ba5e1f892818797ba19650625952a313f8c0c7f429ce83b62c035f56a51368 to build tracker '/tmp/pip-req-tracker-7bz17i9d'
2021-01-18T21:43:00,703     Running setup.py (path:/tmp/pip-wheel-3w41t3d9/vivarium-bioscrape/setup.py) egg_info for package vivarium-bioscrape
2021-01-18T21:43:00,705     Created temporary directory: /tmp/pip-pip-egg-info-sytljxlu
2021-01-18T21:43:00,706     Running command python setup.py egg_info
2021-01-18T21:43:03,110     running egg_info
2021-01-18T21:43:03,115     creating /tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info
2021-01-18T21:43:03,119     writing entry points to /tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/entry_points.txt
2021-01-18T21:43:03,122     writing dependency_links to /tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/dependency_links.txt
2021-01-18T21:43:03,124     writing /tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/PKG-INFO
2021-01-18T21:43:03,128     writing top-level names to /tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/top_level.txt
2021-01-18T21:43:03,130     writing requirements to /tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/requires.txt
2021-01-18T21:43:03,134     writing manifest file '/tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T21:43:03,505     reading manifest file '/tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T21:43:03,514     writing manifest file '/tmp/pip-pip-egg-info-sytljxlu/vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T21:43:03,517     /usr/lib/python3.5/distutils/dist.py:261: UserWarning: Unknown distribution option: 'short_description'
2021-01-18T21:43:03,518       warnings.warn(msg)
2021-01-18T21:43:03,657   Source in /tmp/pip-wheel-3w41t3d9/vivarium-bioscrape has version 0.0.0.1, which satisfies requirement vivarium-bioscrape==0.0.0.1 from https://files.pythonhosted.org/packages/5a/a3/a3544cfaa9ce666046aaabfb4d94c344e1e8df4d85fc6a458ee46f564ee6/vivarium-bioscrape-0.0.0.1.tar.gz#sha256=06ba5e1f892818797ba19650625952a313f8c0c7f429ce83b62c035f56a51368
2021-01-18T21:43:03,658   Removed vivarium-bioscrape==0.0.0.1 from https://files.pythonhosted.org/packages/5a/a3/a3544cfaa9ce666046aaabfb4d94c344e1e8df4d85fc6a458ee46f564ee6/vivarium-bioscrape-0.0.0.1.tar.gz#sha256=06ba5e1f892818797ba19650625952a313f8c0c7f429ce83b62c035f56a51368 from build tracker '/tmp/pip-req-tracker-7bz17i9d'
2021-01-18T21:43:03,662 Building wheels for collected packages: vivarium-bioscrape
2021-01-18T21:43:03,671   Created temporary directory: /tmp/pip-wheel-v_s2t8k0
2021-01-18T21:43:03,672   Building wheel for vivarium-bioscrape (setup.py): started
2021-01-18T21:43:03,673   Destination directory: /tmp/pip-wheel-v_s2t8k0
2021-01-18T21:43:03,673   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-3w41t3d9/vivarium-bioscrape/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-3w41t3d9/vivarium-bioscrape/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-v_s2t8k0
2021-01-18T21:43:05,746   /usr/lib/python3.5/distutils/dist.py:261: UserWarning: Unknown distribution option: 'short_description'
2021-01-18T21:43:05,747     warnings.warn(msg)
2021-01-18T21:43:06,057   running bdist_wheel
2021-01-18T21:43:06,074   running build
2021-01-18T21:43:06,075   running build_py
2021-01-18T21:43:06,413   creating build
2021-01-18T21:43:06,414   creating build/lib
2021-01-18T21:43:06,416   creating build/lib/vivarium_bioscrape
2021-01-18T21:43:06,418   copying vivarium_bioscrape/__init__.py -> build/lib/vivarium_bioscrape
2021-01-18T21:43:06,424   creating build/lib/vivarium_bioscrape/processes
2021-01-18T21:43:06,425   copying vivarium_bioscrape/processes/one_way_map.py -> build/lib/vivarium_bioscrape/processes
2021-01-18T21:43:06,431   copying vivarium_bioscrape/processes/bioscrape.py -> build/lib/vivarium_bioscrape/processes
2021-01-18T21:43:06,437   copying vivarium_bioscrape/processes/__init__.py -> build/lib/vivarium_bioscrape/processes
2021-01-18T21:43:06,442   copying vivarium_bioscrape/processes/linear_map.py -> build/lib/vivarium_bioscrape/processes
2021-01-18T21:43:06,450   creating build/lib/vivarium_bioscrape/composites
2021-01-18T21:43:06,452   copying vivarium_bioscrape/composites/composite_1.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T21:43:06,458   copying vivarium_bioscrape/composites/__init__.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T21:43:06,461   copying vivarium_bioscrape/composites/composite_1b.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T21:43:06,465   copying vivarium_bioscrape/composites/composite_general.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T21:43:06,470   copying vivarium_bioscrape/composites/bioscrape_connector.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T21:43:06,478   creating build/lib/vivarium_bioscrape/experiments
2021-01-18T21:43:06,480   copying vivarium_bioscrape/experiments/__init__.py -> build/lib/vivarium_bioscrape/experiments
2021-01-18T21:43:06,485   copying vivarium_bioscrape/experiments/glucose_phosphorylation.py -> build/lib/vivarium_bioscrape/experiments
2021-01-18T21:43:06,493   creating build/lib/vivarium_bioscrape/library
2021-01-18T21:43:06,496   copying vivarium_bioscrape/library/mappings.py -> build/lib/vivarium_bioscrape/library
2021-01-18T21:43:06,502   copying vivarium_bioscrape/library/schema.py -> build/lib/vivarium_bioscrape/library
2021-01-18T21:43:06,506   copying vivarium_bioscrape/library/__init__.py -> build/lib/vivarium_bioscrape/library
2021-01-18T21:43:06,509   running egg_info
2021-01-18T21:43:06,539   writing requirements to vivarium_bioscrape.egg-info/requires.txt
2021-01-18T21:43:06,541   writing top-level names to vivarium_bioscrape.egg-info/top_level.txt
2021-01-18T21:43:06,543   writing vivarium_bioscrape.egg-info/PKG-INFO
2021-01-18T21:43:06,548   writing dependency_links to vivarium_bioscrape.egg-info/dependency_links.txt
2021-01-18T21:43:06,551   writing entry points to vivarium_bioscrape.egg-info/entry_points.txt
2021-01-18T21:43:06,571   reading manifest file 'vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T21:43:06,588   writing manifest file 'vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T21:43:06,606   installing to build/bdist.linux-armv7l/wheel
2021-01-18T21:43:06,606   running install
2021-01-18T21:43:06,608   running install_lib
2021-01-18T21:43:06,617   creating build/bdist.linux-armv7l
2021-01-18T21:43:06,617   creating build/bdist.linux-armv7l/wheel
2021-01-18T21:43:06,621   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape
2021-01-18T21:43:06,625   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T21:43:06,627   copying build/lib/vivarium_bioscrape/library/mappings.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T21:43:06,633   copying build/lib/vivarium_bioscrape/library/schema.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T21:43:06,637   copying build/lib/vivarium_bioscrape/library/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T21:43:06,642   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T21:43:06,644   copying build/lib/vivarium_bioscrape/composites/composite_1.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T21:43:06,650   copying build/lib/vivarium_bioscrape/composites/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T21:43:06,655   copying build/lib/vivarium_bioscrape/composites/composite_1b.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T21:43:06,661   copying build/lib/vivarium_bioscrape/composites/composite_general.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T21:43:06,667   copying build/lib/vivarium_bioscrape/composites/bioscrape_connector.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T21:43:06,675   copying build/lib/vivarium_bioscrape/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape
2021-01-18T21:43:06,681   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T21:43:06,684   copying build/lib/vivarium_bioscrape/processes/one_way_map.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T21:43:06,691   copying build/lib/vivarium_bioscrape/processes/bioscrape.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T21:43:06,698   copying build/lib/vivarium_bioscrape/processes/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T21:43:06,703   copying build/lib/vivarium_bioscrape/processes/linear_map.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T21:43:06,710   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape/experiments
2021-01-18T21:43:06,713   copying build/lib/vivarium_bioscrape/experiments/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/experiments
2021-01-18T21:43:06,718   copying build/lib/vivarium_bioscrape/experiments/glucose_phosphorylation.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/experiments
2021-01-18T21:43:06,723   running install_egg_info
2021-01-18T21:43:06,743   Copying vivarium_bioscrape.egg-info to build/bdist.linux-armv7l/wheel/vivarium_bioscrape-0.0.0.1-py3.5.egg-info
2021-01-18T21:43:06,773   running install_scripts
2021-01-18T21:43:06,964   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape-0.0.0.1.dist-info/WHEEL
2021-01-18T21:43:07,241   Building wheel for vivarium-bioscrape (setup.py): finished with status 'done'
2021-01-18T21:43:07,245   Created wheel for vivarium-bioscrape: filename=vivarium_bioscrape-0.0.0.1-py3-none-any.whl size=20626 sha256=71723d281d2dd76a5c278d527d6e45e21b940704452d486f51ca9b9d651e320d
2021-01-18T21:43:07,246   Stored in directory: /tmp/pip-ephem-wheel-cache-ek0b1j03/wheels/65/09/2e/cf1b618ff4ef362e067bc0d403d81cf32a216fdba1aa71a264
2021-01-18T21:43:07,250 Successfully built vivarium-bioscrape
2021-01-18T21:43:07,260 Removed build tracker: '/tmp/pip-req-tracker-7bz17i9d'