2021-01-18T22:23:48,554 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-18T22:23:49,203 Created temporary directory: /tmp/pip-ephem-wheel-cache-bmj89h4d
2021-01-18T22:23:49,207 Created temporary directory: /tmp/pip-req-tracker-3gfq0cl_
2021-01-18T22:23:49,208 Initialized build tracking at /tmp/pip-req-tracker-3gfq0cl_
2021-01-18T22:23:49,208 Created build tracker: /tmp/pip-req-tracker-3gfq0cl_
2021-01-18T22:23:49,209 Entered build tracker: /tmp/pip-req-tracker-3gfq0cl_
2021-01-18T22:23:49,210 Created temporary directory: /tmp/pip-wheel-e84gep6r
2021-01-18T22:23:49,225 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2021-01-18T22:23:49,228 2 location(s) to search for versions of vivarium-bioscrape:
2021-01-18T22:23:49,228 * https://pypi.org/simple/vivarium-bioscrape/
2021-01-18T22:23:49,228 * https://pypi.ngc.nvidia.com/vivarium-bioscrape/
2021-01-18T22:23:49,228 Fetching project page and analyzing links: https://pypi.org/simple/vivarium-bioscrape/
2021-01-18T22:23:49,230 Getting page https://pypi.org/simple/vivarium-bioscrape/
2021-01-18T22:23:49,234 Found index url https://pypi.org/simple
2021-01-18T22:23:49,608   Found link https://files.pythonhosted.org/packages/5a/a3/a3544cfaa9ce666046aaabfb4d94c344e1e8df4d85fc6a458ee46f564ee6/vivarium-bioscrape-0.0.0.1.tar.gz#sha256=06ba5e1f892818797ba19650625952a313f8c0c7f429ce83b62c035f56a51368 (from https://pypi.org/simple/vivarium-bioscrape/), version: 0.0.0.1
2021-01-18T22:23:49,609   Found link https://files.pythonhosted.org/packages/b5/17/814dcd1fd0048428b4efbb5fc80b2eacce3283576892f2ddb6948a4af522/vivarium-bioscrape-0.0.0.2.tar.gz#sha256=328b461401d5cf591266e0416571f715c6ff4bf893b35ac1d79e2ecfac8d4be9 (from https://pypi.org/simple/vivarium-bioscrape/), version: 0.0.0.2
2021-01-18T22:23:49,610 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/vivarium-bioscrape/
2021-01-18T22:23:49,611 Getting page https://pypi.ngc.nvidia.com/vivarium-bioscrape/
2021-01-18T22:23:49,613 Found index url https://pypi.ngc.nvidia.com
2021-01-18T22:23:50,619 Could not fetch URL https://pypi.ngc.nvidia.com/vivarium-bioscrape/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/vivarium-bioscrape/ - skipping
2021-01-18T22:23:50,636 Given no hashes to check 1 links for project 'vivarium-bioscrape': discarding no candidates
2021-01-18T22:23:50,639 Using version 0.0.0.2 (newest of versions: 0.0.0.2)
2021-01-18T22:23:50,646 Collecting vivarium-bioscrape==0.0.0.2
2021-01-18T22:23:50,650   Created temporary directory: /tmp/pip-unpack-_aiuua_q
2021-01-18T22:23:50,863   Downloading vivarium-bioscrape-0.0.0.2.tar.gz (11 kB)
2021-01-18T22:23:50,984   Added vivarium-bioscrape==0.0.0.2 from https://files.pythonhosted.org/packages/b5/17/814dcd1fd0048428b4efbb5fc80b2eacce3283576892f2ddb6948a4af522/vivarium-bioscrape-0.0.0.2.tar.gz#sha256=328b461401d5cf591266e0416571f715c6ff4bf893b35ac1d79e2ecfac8d4be9 to build tracker '/tmp/pip-req-tracker-3gfq0cl_'
2021-01-18T22:23:50,988     Running setup.py (path:/tmp/pip-wheel-e84gep6r/vivarium-bioscrape/setup.py) egg_info for package vivarium-bioscrape
2021-01-18T22:23:50,990     Created temporary directory: /tmp/pip-pip-egg-info-poiqe_vn
2021-01-18T22:23:50,991     Running command python setup.py egg_info
2021-01-18T22:23:53,048     running egg_info
2021-01-18T22:23:53,053     creating /tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info
2021-01-18T22:23:53,055     writing dependency_links to /tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/dependency_links.txt
2021-01-18T22:23:53,058     writing /tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/PKG-INFO
2021-01-18T22:23:53,061     writing top-level names to /tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/top_level.txt
2021-01-18T22:23:53,063     writing requirements to /tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/requires.txt
2021-01-18T22:23:53,064     writing entry points to /tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/entry_points.txt
2021-01-18T22:23:53,067     writing manifest file '/tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T22:23:53,377     reading manifest file '/tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T22:23:53,385     writing manifest file '/tmp/pip-pip-egg-info-poiqe_vn/vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T22:23:53,387     /usr/lib/python3.5/distutils/dist.py:261: UserWarning: Unknown distribution option: 'short_description'
2021-01-18T22:23:53,387       warnings.warn(msg)
2021-01-18T22:23:53,513   Source in /tmp/pip-wheel-e84gep6r/vivarium-bioscrape has version 0.0.0.2, which satisfies requirement vivarium-bioscrape==0.0.0.2 from https://files.pythonhosted.org/packages/b5/17/814dcd1fd0048428b4efbb5fc80b2eacce3283576892f2ddb6948a4af522/vivarium-bioscrape-0.0.0.2.tar.gz#sha256=328b461401d5cf591266e0416571f715c6ff4bf893b35ac1d79e2ecfac8d4be9
2021-01-18T22:23:53,515   Removed vivarium-bioscrape==0.0.0.2 from https://files.pythonhosted.org/packages/b5/17/814dcd1fd0048428b4efbb5fc80b2eacce3283576892f2ddb6948a4af522/vivarium-bioscrape-0.0.0.2.tar.gz#sha256=328b461401d5cf591266e0416571f715c6ff4bf893b35ac1d79e2ecfac8d4be9 from build tracker '/tmp/pip-req-tracker-3gfq0cl_'
2021-01-18T22:23:53,518 Building wheels for collected packages: vivarium-bioscrape
2021-01-18T22:23:53,524   Created temporary directory: /tmp/pip-wheel-oqbbdys6
2021-01-18T22:23:53,525   Building wheel for vivarium-bioscrape (setup.py): started
2021-01-18T22:23:53,526   Destination directory: /tmp/pip-wheel-oqbbdys6
2021-01-18T22:23:53,526   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-e84gep6r/vivarium-bioscrape/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-e84gep6r/vivarium-bioscrape/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-oqbbdys6
2021-01-18T22:23:55,330   /usr/lib/python3.5/distutils/dist.py:261: UserWarning: Unknown distribution option: 'short_description'
2021-01-18T22:23:55,331     warnings.warn(msg)
2021-01-18T22:23:55,598   running bdist_wheel
2021-01-18T22:23:55,613   running build
2021-01-18T22:23:55,614   running build_py
2021-01-18T22:23:55,902   creating build
2021-01-18T22:23:55,903   creating build/lib
2021-01-18T22:23:55,904   creating build/lib/vivarium_bioscrape
2021-01-18T22:23:55,906   copying vivarium_bioscrape/__init__.py -> build/lib/vivarium_bioscrape
2021-01-18T22:23:55,910   creating build/lib/vivarium_bioscrape/processes
2021-01-18T22:23:55,912   copying vivarium_bioscrape/processes/__init__.py -> build/lib/vivarium_bioscrape/processes
2021-01-18T22:23:55,914   copying vivarium_bioscrape/processes/one_way_map.py -> build/lib/vivarium_bioscrape/processes
2021-01-18T22:23:55,918   copying vivarium_bioscrape/processes/bioscrape.py -> build/lib/vivarium_bioscrape/processes
2021-01-18T22:23:55,923   creating build/lib/vivarium_bioscrape/composites
2021-01-18T22:23:55,924   copying vivarium_bioscrape/composites/composite_1b.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T22:23:55,928   copying vivarium_bioscrape/composites/composite_1.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T22:23:55,931   copying vivarium_bioscrape/composites/bioscrape_connector.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T22:23:55,935   copying vivarium_bioscrape/composites/__init__.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T22:23:55,937   copying vivarium_bioscrape/composites/composite_general.py -> build/lib/vivarium_bioscrape/composites
2021-01-18T22:23:55,942   creating build/lib/vivarium_bioscrape/library
2021-01-18T22:23:55,943   copying vivarium_bioscrape/library/schema.py -> build/lib/vivarium_bioscrape/library
2021-01-18T22:23:55,946   copying vivarium_bioscrape/library/__init__.py -> build/lib/vivarium_bioscrape/library
2021-01-18T22:23:55,949   copying vivarium_bioscrape/library/mappings.py -> build/lib/vivarium_bioscrape/library
2021-01-18T22:23:55,952   running egg_info
2021-01-18T22:23:55,978   writing dependency_links to vivarium_bioscrape.egg-info/dependency_links.txt
2021-01-18T22:23:55,981   writing requirements to vivarium_bioscrape.egg-info/requires.txt
2021-01-18T22:23:55,983   writing top-level names to vivarium_bioscrape.egg-info/top_level.txt
2021-01-18T22:23:55,985   writing vivarium_bioscrape.egg-info/PKG-INFO
2021-01-18T22:23:55,988   writing entry points to vivarium_bioscrape.egg-info/entry_points.txt
2021-01-18T22:23:55,999   reading manifest file 'vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T22:23:56,008   writing manifest file 'vivarium_bioscrape.egg-info/SOURCES.txt'
2021-01-18T22:23:56,022   installing to build/bdist.linux-armv7l/wheel
2021-01-18T22:23:56,023   running install
2021-01-18T22:23:56,024   running install_lib
2021-01-18T22:23:56,031   creating build/bdist.linux-armv7l
2021-01-18T22:23:56,032   creating build/bdist.linux-armv7l/wheel
2021-01-18T22:23:56,035   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape
2021-01-18T22:23:56,037   copying build/lib/vivarium_bioscrape/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape
2021-01-18T22:23:56,040   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T22:23:56,042   copying build/lib/vivarium_bioscrape/composites/composite_1b.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T22:23:56,045   copying build/lib/vivarium_bioscrape/composites/composite_1.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T22:23:56,049   copying build/lib/vivarium_bioscrape/composites/bioscrape_connector.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T22:23:56,053   copying build/lib/vivarium_bioscrape/composites/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T22:23:56,055   copying build/lib/vivarium_bioscrape/composites/composite_general.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/composites
2021-01-18T22:23:56,060   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T22:23:56,061   copying build/lib/vivarium_bioscrape/library/schema.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T22:23:56,065   copying build/lib/vivarium_bioscrape/library/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T22:23:56,067   copying build/lib/vivarium_bioscrape/library/mappings.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/library
2021-01-18T22:23:56,072   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T22:23:56,073   copying build/lib/vivarium_bioscrape/processes/__init__.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T22:23:56,076   copying build/lib/vivarium_bioscrape/processes/one_way_map.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T22:23:56,080   copying build/lib/vivarium_bioscrape/processes/bioscrape.py -> build/bdist.linux-armv7l/wheel/vivarium_bioscrape/processes
2021-01-18T22:23:56,083   running install_egg_info
2021-01-18T22:23:56,099   Copying vivarium_bioscrape.egg-info to build/bdist.linux-armv7l/wheel/vivarium_bioscrape-0.0.0.2-py3.5.egg-info
2021-01-18T22:23:56,120   running install_scripts
2021-01-18T22:23:56,270   creating build/bdist.linux-armv7l/wheel/vivarium_bioscrape-0.0.0.2.dist-info/WHEEL
2021-01-18T22:23:56,492   Building wheel for vivarium-bioscrape (setup.py): finished with status 'done'
2021-01-18T22:23:56,496   Created wheel for vivarium-bioscrape: filename=vivarium_bioscrape-0.0.0.2-py3-none-any.whl size=17834 sha256=6ab6204491acab8ebca222af5aa4c66a80a5eae75ccd0697d63e82618d2d80b9
2021-01-18T22:23:56,497   Stored in directory: /tmp/pip-ephem-wheel-cache-bmj89h4d/wheels/2f/be/24/61e6153efe6baef959ed81480eae3d76f58120737aabb441f4
2021-01-18T22:23:56,500 Successfully built vivarium-bioscrape
2021-01-18T22:23:56,506 Removed build tracker: '/tmp/pip-req-tracker-3gfq0cl_'