2021-01-19T01:16:12,018 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-19T01:16:12,703 Created temporary directory: /tmp/pip-ephem-wheel-cache-ekyfg6nn
2021-01-19T01:16:12,708 Created temporary directory: /tmp/pip-req-tracker-halfew56
2021-01-19T01:16:12,709 Initialized build tracking at /tmp/pip-req-tracker-halfew56
2021-01-19T01:16:12,710 Created build tracker: /tmp/pip-req-tracker-halfew56
2021-01-19T01:16:12,710 Entered build tracker: /tmp/pip-req-tracker-halfew56
2021-01-19T01:16:12,712 Created temporary directory: /tmp/pip-wheel-k78y3m15
2021-01-19T01:16:12,731 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2021-01-19T01:16:12,734 2 location(s) to search for versions of rcsb-utils-chem:
2021-01-19T01:16:12,734 * https://pypi.org/simple/rcsb-utils-chem/
2021-01-19T01:16:12,734 * https://pypi.ngc.nvidia.com/rcsb-utils-chem/
2021-01-19T01:16:12,734 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/
2021-01-19T01:16:12,737 Getting page https://pypi.org/simple/rcsb-utils-chem/
2021-01-19T01:16:12,741 Found index url https://pypi.org/simple
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2021-01-19T01:16:13,255   Found link https://files.pythonhosted.org/packages/ae/6e/b68046b1cc8f0f7c3f462d2591ec63061e8fb6cd17ab41bab3d60661b792/rcsb.utils.chem-0.40.tar.gz#sha256=dfb8d44085326ad310fb773c776317420b592bf63a8b449381bf79293ff0479b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.40
2021-01-19T01:16:13,256   Found link https://files.pythonhosted.org/packages/32/55/ef2b128f8fb60a0b8ca1c7c8ee2ef5925b52664e8a2eb04271c26f45b4be/rcsb.utils.chem-0.41-py2.py3-none-any.whl#sha256=17437217dd8bbabf4ed399a27a647a0cd53405037966e0e4322ac90994abf505 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2021-01-19T01:16:13,257   Found link https://files.pythonhosted.org/packages/66/e5/53afaa02860c8eff39ff2c8931ced37f4ff2c3f53ec2e39d6dde071bdeb6/rcsb.utils.chem-0.41.tar.gz#sha256=af8a785c4b421d96cc12558add6109fbf1d4214c8b3973cbe66e9f027ca962c2 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.41
2021-01-19T01:16:13,258   Found link https://files.pythonhosted.org/packages/48/b4/e4302c54cb810233dc0fd8b98be5e0fc89e5fc8b6a7f3bcdd12897efacf1/rcsb.utils.chem-0.42.tar.gz#sha256=f4d0f409dff8510e5193127c0da4882443860ee4e4084ac9a5ecc6ecdf2d9e74 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.42
2021-01-19T01:16:13,259   Found link https://files.pythonhosted.org/packages/cc/17/dc085272edf1a807b80df64aa51a233b41305b863cf8de95e7b339c45d86/rcsb.utils.chem-0.43.tar.gz#sha256=7a529bde69e6dfaa1951bd9fb185d8cae922668c1c16f9dcbb7f794df2c0a051 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.43
2021-01-19T01:16:13,260   Found link https://files.pythonhosted.org/packages/d0/0c/25539acbdf220d74a65ee9aaffb83f8a4c0749ba894816cb95efc6f993e6/rcsb.utils.chem-0.45.tar.gz#sha256=5965c277172093334642bb339cbdcfeabf97229d9e04600698b15cdca2e0490b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.45
2021-01-19T01:16:13,261   Found link https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.46
2021-01-19T01:16:13,262   Found link https://files.pythonhosted.org/packages/ea/ec/b15f27f9bade5197117a66a8ca4e3ccddbe1d75329b455b247e0ebeb48ff/rcsb.utils.chem-0.47.tar.gz#sha256=38a34f5e5e7fc51d3e2c29282168828923966348205311d7964a19dc5020b4b7 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.47
2021-01-19T01:16:13,263   Found link https://files.pythonhosted.org/packages/bd/f2/5d8c5d0ca3a095766c61bc5c4169602742c471eccc53604d982703d594ef/rcsb.utils.chem-0.48.tar.gz#sha256=02aaab58565423a96fa75152bea9969a1014a9c882583f870c4860f1b9bbe846 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.48
2021-01-19T01:16:13,263   Found link https://files.pythonhosted.org/packages/2d/fa/83ed67ebbc2d799544945296fe90b48c45cd6d563a3ddb73f9ef6bd13629/rcsb.utils.chem-0.49.tar.gz#sha256=3b44fa091076acb53a1730442b3873016bb9cb612129e73223d80adb4b41c7b1 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.49
2021-01-19T01:16:13,264   Found link https://files.pythonhosted.org/packages/b7/d5/8d5d3c26db3fc912ddb90a09f89e47cb99fb6b80a2f7f5090811aaeeb8c3/rcsb.utils.chem-0.50.tar.gz#sha256=23bf64d0903f9fb956a1f284694eadf3000d66a93e436df1ef3eea5db4d77536 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.50
2021-01-19T01:16:13,265 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-chem/
2021-01-19T01:16:13,266 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-chem/
2021-01-19T01:16:13,269 Found index url https://pypi.ngc.nvidia.com
2021-01-19T01:16:14,321 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-chem/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-chem/ - skipping
2021-01-19T01:16:14,363 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates
2021-01-19T01:16:14,366 Using version 0.50 (newest of versions: 0.50)
2021-01-19T01:16:14,375 Collecting rcsb-utils-chem==0.50
2021-01-19T01:16:14,381   Created temporary directory: /tmp/pip-unpack-rgn4ydj4
2021-01-19T01:16:14,629   Downloading rcsb.utils.chem-0.50.tar.gz (71 kB)
2021-01-19T01:16:14,977   Added rcsb-utils-chem==0.50 from https://files.pythonhosted.org/packages/b7/d5/8d5d3c26db3fc912ddb90a09f89e47cb99fb6b80a2f7f5090811aaeeb8c3/rcsb.utils.chem-0.50.tar.gz#sha256=23bf64d0903f9fb956a1f284694eadf3000d66a93e436df1ef3eea5db4d77536 to build tracker '/tmp/pip-req-tracker-halfew56'
2021-01-19T01:16:14,980     Running setup.py (path:/tmp/pip-wheel-k78y3m15/rcsb-utils-chem/setup.py) egg_info for package rcsb-utils-chem
2021-01-19T01:16:14,982     Created temporary directory: /tmp/pip-pip-egg-info-ne2f_0n1
2021-01-19T01:16:14,982     Running command python setup.py egg_info
2021-01-19T01:16:17,266     running egg_info
2021-01-19T01:16:17,273     creating /tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info
2021-01-19T01:16:17,275     writing top-level names to /tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/top_level.txt
2021-01-19T01:16:17,279     writing entry points to /tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/entry_points.txt
2021-01-19T01:16:17,281     writing requirements to /tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/requires.txt
2021-01-19T01:16:17,284     writing dependency_links to /tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/dependency_links.txt
2021-01-19T01:16:17,286     writing /tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/PKG-INFO
2021-01-19T01:16:17,294     writing manifest file '/tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-19T01:16:17,671     reading manifest file '/tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-19T01:16:17,675     reading manifest template 'MANIFEST.in'
2021-01-19T01:16:17,684     writing manifest file '/tmp/pip-pip-egg-info-ne2f_0n1/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-19T01:16:17,819   Source in /tmp/pip-wheel-k78y3m15/rcsb-utils-chem has version 0.50, which satisfies requirement rcsb-utils-chem==0.50 from https://files.pythonhosted.org/packages/b7/d5/8d5d3c26db3fc912ddb90a09f89e47cb99fb6b80a2f7f5090811aaeeb8c3/rcsb.utils.chem-0.50.tar.gz#sha256=23bf64d0903f9fb956a1f284694eadf3000d66a93e436df1ef3eea5db4d77536
2021-01-19T01:16:17,821   Removed rcsb-utils-chem==0.50 from https://files.pythonhosted.org/packages/b7/d5/8d5d3c26db3fc912ddb90a09f89e47cb99fb6b80a2f7f5090811aaeeb8c3/rcsb.utils.chem-0.50.tar.gz#sha256=23bf64d0903f9fb956a1f284694eadf3000d66a93e436df1ef3eea5db4d77536 from build tracker '/tmp/pip-req-tracker-halfew56'
2021-01-19T01:16:17,824 Building wheels for collected packages: rcsb-utils-chem
2021-01-19T01:16:17,833   Created temporary directory: /tmp/pip-wheel-z981ektp
2021-01-19T01:16:17,834   Building wheel for rcsb-utils-chem (setup.py): started
2021-01-19T01:16:17,835   Destination directory: /tmp/pip-wheel-z981ektp
2021-01-19T01:16:17,836   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-k78y3m15/rcsb-utils-chem/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-k78y3m15/rcsb-utils-chem/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-z981ektp
2021-01-19T01:16:20,124   running bdist_wheel
2021-01-19T01:16:20,139   running build
2021-01-19T01:16:20,140   running build_py
2021-01-19T01:16:20,482   creating build
2021-01-19T01:16:20,483   creating build/lib
2021-01-19T01:16:20,484   creating build/lib/rcsb
2021-01-19T01:16:20,487   copying rcsb/__init__.py -> build/lib/rcsb
2021-01-19T01:16:20,492   creating build/lib/rcsb/utils
2021-01-19T01:16:20,494   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2021-01-19T01:16:20,502   creating build/lib/rcsb/utils/chem
2021-01-19T01:16:20,504   copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,510   copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,515   copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,524   copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,531   copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,538   copying rcsb/utils/chem/OeChemCompUtils.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,545   copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,551   copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,557   copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,568   copying rcsb/utils/chem/OeMcssSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,576   copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,584   copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,591   copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,597   copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,603   copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,610   copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,618   copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,624   copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,633   copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,637   copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,642   copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,648   copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,654   copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,669   copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,675   copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,683   copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,688   copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem
2021-01-19T01:16:20,718   installing to build/bdist.linux-armv7l/wheel
2021-01-19T01:16:20,719   running install
2021-01-19T01:16:20,721   running install_lib
2021-01-19T01:16:20,729   creating build/bdist.linux-armv7l
2021-01-19T01:16:20,730   creating build/bdist.linux-armv7l/wheel
2021-01-19T01:16:20,734   creating build/bdist.linux-armv7l/wheel/rcsb
2021-01-19T01:16:20,738   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-19T01:16:20,740   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-19T01:16:20,749   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,752   copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,759   copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,766   copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,775   copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,780   copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,785   copying build/lib/rcsb/utils/chem/OeChemCompUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,793   copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,800   copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,808   copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,818   copying build/lib/rcsb/utils/chem/OeMcssSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,826   copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,833   copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,842   copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,850   copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,857   copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,864   copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,872   copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,878   copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,888   copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,894   copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,900   copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,908   copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,915   copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,931   copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,937   copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,945   copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,951   copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-19T01:16:20,957   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2021-01-19T01:16:20,961   running install_egg_info
2021-01-19T01:16:21,005   running egg_info
2021-01-19T01:16:21,006   writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt
2021-01-19T01:16:21,010   writing requirements to rcsb.utils.chem.egg-info/requires.txt
2021-01-19T01:16:21,012   writing entry points to rcsb.utils.chem.egg-info/entry_points.txt
2021-01-19T01:16:21,015   writing top-level names to rcsb.utils.chem.egg-info/top_level.txt
2021-01-19T01:16:21,017   writing rcsb.utils.chem.egg-info/PKG-INFO
2021-01-19T01:16:21,033   reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-19T01:16:21,039   reading manifest template 'MANIFEST.in'
2021-01-19T01:16:21,049   writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-19T01:16:21,053   Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.50-py3.5.egg-info
2021-01-19T01:16:21,089   running install_scripts
2021-01-19T01:16:21,318   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.50.dist-info/WHEEL
2021-01-19T01:16:21,715   Building wheel for rcsb-utils-chem (setup.py): finished with status 'done'
2021-01-19T01:16:21,720   Created wheel for rcsb-utils-chem: filename=rcsb.utils.chem-0.50-py2.py3-none-any.whl size=89734 sha256=bbc3d1057db2c56a765485cb8ea2c3b23ba52ebdaef28f70b5f145ccd19d23d4
2021-01-19T01:16:21,721   Stored in directory: /tmp/pip-ephem-wheel-cache-ekyfg6nn/wheels/3d/0b/f0/c73c6a79cc894846f4f79908f8b0c4f031ec5ec2eea13eeb8e
2021-01-19T01:16:21,725 Successfully built rcsb-utils-chem
2021-01-19T01:16:21,747 Removed build tracker: '/tmp/pip-req-tracker-halfew56'