2021-01-21T09:20:01,649 Created temporary directory: /tmp/pip-ephem-wheel-cache-czg6ixm1 2021-01-21T09:20:01,652 Created temporary directory: /tmp/pip-req-tracker-gcdfhmt1 2021-01-21T09:20:01,652 Initialized build tracking at /tmp/pip-req-tracker-gcdfhmt1 2021-01-21T09:20:01,653 Created build tracker: /tmp/pip-req-tracker-gcdfhmt1 2021-01-21T09:20:01,653 Entered build tracker: /tmp/pip-req-tracker-gcdfhmt1 2021-01-21T09:20:01,653 Created temporary directory: /tmp/pip-wheel-sa2wnz70 2021-01-21T09:20:01,664 1 location(s) to search for versions of motifscan: 2021-01-21T09:20:01,664 * https://pypi.org/simple/motifscan/ 2021-01-21T09:20:01,664 Fetching project page and analyzing links: https://pypi.org/simple/motifscan/ 2021-01-21T09:20:01,665 Getting page https://pypi.org/simple/motifscan/ 2021-01-21T09:20:01,667 Found index url https://pypi.org/simple 2021-01-21T09:20:01,761 Found link https://files.pythonhosted.org/packages/e4/ad/c99471abe222aa7fc17ca8f6cf272f96e137a877dab8a8b146049b0d8bb5/motifscan-1.1.tar.gz#sha256=e325d50e3a4aecbb772ff7a885190cd93305bb33fef18baa538fa2b038642284 (from https://pypi.org/simple/motifscan/), version: 1.1 2021-01-21T09:20:01,761 Found link https://files.pythonhosted.org/packages/12/fc/0974ba6cbffbbd9d6d4fd6e69f433d3a22c9936d2f85ff01f8d7e573bed9/motifscan-1.1.2.tar.gz#sha256=7ba31fed062fc1d228ac9178383dc12711bf4f65d98ade383eccf23a4abe0099 (from https://pypi.org/simple/motifscan/), version: 1.1.2 2021-01-21T09:20:01,762 Found link https://files.pythonhosted.org/packages/5c/ab/19b9e8656bdc2ee002c2c35f01019bff192a9f9e2ff56da990f5a1bc06c2/motifscan-1.2.0.tar.gz#sha256=2f9d98b4a1f15338bd8d1ce4b78fee379a9864bf9274487f0d744f74e8adef17 (from https://pypi.org/simple/motifscan/) (requires-python:>=3.6), version: 1.2.0 2021-01-21T09:20:01,763 Found link https://files.pythonhosted.org/packages/c1/3c/9c7bcd71c2246cbfaaa78a5c7c6002096a256e00638e4f4df7ed6ec01c7b/motifscan-1.2.1.tar.gz#sha256=304e28989e23e0c8547a3cdce7c49fd31cbe873f6b9614be2e911f1fa1712aba (from https://pypi.org/simple/motifscan/) (requires-python:>=3.6), version: 1.2.1 2021-01-21T09:20:01,763 Found link https://files.pythonhosted.org/packages/b9/5b/c6c585bab0dac094e112b9620c5b93e8fe7a69bda6317371894569c29259/motifscan-1.2.2.tar.gz#sha256=90259b116220f6448ddc7ce9578cc56c39a38ba792602acc04633d5a77bf7a65 (from https://pypi.org/simple/motifscan/) (requires-python:>=3.6), version: 1.2.2 2021-01-21T09:20:01,764 Found link https://files.pythonhosted.org/packages/a9/25/9f149660e79c145c6bcc9a9d4ceb35f8c3eff10dcddce37014663c062d3d/motifscan-1.3.0.tar.gz#sha256=8059ab3232dfe7580835c5e953a8edd3f843676d57a6afbc41c5518a8a4dfde2 (from https://pypi.org/simple/motifscan/) (requires-python:>=3.6), version: 1.3.0 2021-01-21T09:20:01,768 Given no hashes to check 1 links for project 'motifscan': discarding no candidates 2021-01-21T09:20:01,769 Using version 1.3.0 (newest of versions: 1.3.0) 2021-01-21T09:20:01,773 Collecting motifscan==1.3.0 2021-01-21T09:20:01,774 Created temporary directory: /tmp/pip-unpack-y9knoorx 2021-01-21T09:20:02,174 Downloading motifscan-1.3.0.tar.gz (232 kB) 2021-01-21T09:20:02,475 Added motifscan==1.3.0 from https://files.pythonhosted.org/packages/a9/25/9f149660e79c145c6bcc9a9d4ceb35f8c3eff10dcddce37014663c062d3d/motifscan-1.3.0.tar.gz#sha256=8059ab3232dfe7580835c5e953a8edd3f843676d57a6afbc41c5518a8a4dfde2 to build tracker '/tmp/pip-req-tracker-gcdfhmt1' 2021-01-21T09:20:02,476 Running setup.py (path:/tmp/pip-wheel-sa2wnz70/motifscan/setup.py) egg_info for package motifscan 2021-01-21T09:20:02,477 Created temporary directory: /tmp/pip-pip-egg-info-iph150he 2021-01-21T09:20:02,477 Running command python setup.py egg_info 2021-01-21T09:20:03,508 running egg_info 2021-01-21T09:20:03,510 creating /tmp/pip-pip-egg-info-iph150he/motifscan.egg-info 2021-01-21T09:20:03,511 writing /tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/PKG-INFO 2021-01-21T09:20:03,514 writing dependency_links to /tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/dependency_links.txt 2021-01-21T09:20:03,516 writing entry points to /tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/entry_points.txt 2021-01-21T09:20:03,517 writing requirements to /tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/requires.txt 2021-01-21T09:20:03,518 writing top-level names to /tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/top_level.txt 2021-01-21T09:20:03,520 writing manifest file '/tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/SOURCES.txt' 2021-01-21T09:20:03,839 reading manifest file '/tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/SOURCES.txt' 2021-01-21T09:20:03,841 reading manifest template 'MANIFEST.in' 2021-01-21T09:20:03,860 no previously-included directories found matching 'docs/build' 2021-01-21T09:20:03,869 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2021-01-21T09:20:03,870 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2021-01-21T09:20:03,876 writing manifest file '/tmp/pip-pip-egg-info-iph150he/motifscan.egg-info/SOURCES.txt' 2021-01-21T09:20:03,949 Source in /tmp/pip-wheel-sa2wnz70/motifscan has version 1.3.0, which satisfies requirement motifscan==1.3.0 from https://files.pythonhosted.org/packages/a9/25/9f149660e79c145c6bcc9a9d4ceb35f8c3eff10dcddce37014663c062d3d/motifscan-1.3.0.tar.gz#sha256=8059ab3232dfe7580835c5e953a8edd3f843676d57a6afbc41c5518a8a4dfde2 2021-01-21T09:20:03,950 Removed motifscan==1.3.0 from https://files.pythonhosted.org/packages/a9/25/9f149660e79c145c6bcc9a9d4ceb35f8c3eff10dcddce37014663c062d3d/motifscan-1.3.0.tar.gz#sha256=8059ab3232dfe7580835c5e953a8edd3f843676d57a6afbc41c5518a8a4dfde2 from build tracker '/tmp/pip-req-tracker-gcdfhmt1' 2021-01-21T09:20:03,953 Building wheels for collected packages: motifscan 2021-01-21T09:20:03,958 Created temporary directory: /tmp/pip-wheel-6w_4fc5b 2021-01-21T09:20:03,958 Building wheel for motifscan (setup.py): started 2021-01-21T09:20:03,959 Destination directory: /tmp/pip-wheel-6w_4fc5b 2021-01-21T09:20:03,959 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-sa2wnz70/motifscan/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-sa2wnz70/motifscan/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6w_4fc5b 2021-01-21T09:20:04,964 running bdist_wheel 2021-01-21T09:20:04,971 running build 2021-01-21T09:20:04,971 running build_py 2021-01-21T09:20:05,105 creating build 2021-01-21T09:20:05,105 creating build/lib.linux-armv7l-3.7 2021-01-21T09:20:05,106 creating build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,107 copying motifscan/stats.py -> build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,109 copying motifscan/scanner.py -> build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,111 copying motifscan/config.py -> build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,113 copying motifscan/plot.py -> build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,115 copying motifscan/logging.py -> build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,117 copying motifscan/exceptions.py -> build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,119 copying motifscan/__init__.py -> build/lib.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,121 creating build/lib.linux-armv7l-3.7/motifscan/io 2021-01-21T09:20:05,122 copying motifscan/io/utils.py -> build/lib.linux-armv7l-3.7/motifscan/io 2021-01-21T09:20:05,124 copying motifscan/io/__init__.py -> build/lib.linux-armv7l-3.7/motifscan/io 2021-01-21T09:20:05,127 creating build/lib.linux-armv7l-3.7/motifscan/cli 2021-01-21T09:20:05,128 copying motifscan/cli/scan.py -> build/lib.linux-armv7l-3.7/motifscan/cli 2021-01-21T09:20:05,130 copying motifscan/cli/config.py -> build/lib.linux-armv7l-3.7/motifscan/cli 2021-01-21T09:20:05,132 copying motifscan/cli/motif.py -> build/lib.linux-armv7l-3.7/motifscan/cli 2021-01-21T09:20:05,135 copying motifscan/cli/main.py -> build/lib.linux-armv7l-3.7/motifscan/cli 2021-01-21T09:20:05,138 copying motifscan/cli/genome.py -> build/lib.linux-armv7l-3.7/motifscan/cli 2021-01-21T09:20:05,140 copying motifscan/cli/__init__.py -> build/lib.linux-armv7l-3.7/motifscan/cli 2021-01-21T09:20:05,142 creating build/lib.linux-armv7l-3.7/motifscan/region 2021-01-21T09:20:05,143 copying motifscan/region/utils.py -> build/lib.linux-armv7l-3.7/motifscan/region 2021-01-21T09:20:05,146 copying motifscan/region/parsers.py -> build/lib.linux-armv7l-3.7/motifscan/region 2021-01-21T09:20:05,148 copying motifscan/region/__init__.py -> build/lib.linux-armv7l-3.7/motifscan/region 2021-01-21T09:20:05,151 creating build/lib.linux-armv7l-3.7/motifscan/genome 2021-01-21T09:20:05,152 copying motifscan/genome/annotation.py -> build/lib.linux-armv7l-3.7/motifscan/genome 2021-01-21T09:20:05,154 copying motifscan/genome/databases.py -> build/lib.linux-armv7l-3.7/motifscan/genome 2021-01-21T09:20:05,157 copying motifscan/genome/__init__.py -> build/lib.linux-armv7l-3.7/motifscan/genome 2021-01-21T09:20:05,160 creating build/lib.linux-armv7l-3.7/motifscan/motif 2021-01-21T09:20:05,160 copying motifscan/motif/databases.py -> build/lib.linux-armv7l-3.7/motifscan/motif 2021-01-21T09:20:05,163 copying motifscan/motif/__init__.py -> build/lib.linux-armv7l-3.7/motifscan/motif 2021-01-21T09:20:05,165 copying motifscan/motif/matrix.py -> build/lib.linux-armv7l-3.7/motifscan/motif 2021-01-21T09:20:05,171 running build_ext 2021-01-21T09:20:05,339 building 'motifscan.motif.cscore' extension 2021-01-21T09:20:05,340 creating build/temp.linux-armv7l-3.7 2021-01-21T09:20:05,340 creating build/temp.linux-armv7l-3.7/motifscan 2021-01-21T09:20:05,341 creating build/temp.linux-armv7l-3.7/motifscan/motif 2021-01-21T09:20:05,342 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c motifscan/motif/cscore.c -o build/temp.linux-armv7l-3.7/motifscan/motif/cscore.o -std=c99 2021-01-21T09:20:06,209 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/motifscan/motif/cscore.o -o build/lib.linux-armv7l-3.7/motifscan/motif/cscore.cpython-37m-arm-linux-gnueabihf.so 2021-01-21T09:20:06,341 installing to build/bdist.linux-armv7l/wheel 2021-01-21T09:20:06,341 running install 2021-01-21T09:20:06,343 running install_lib 2021-01-21T09:20:06,347 creating build/bdist.linux-armv7l 2021-01-21T09:20:06,347 creating build/bdist.linux-armv7l/wheel 2021-01-21T09:20:06,350 creating build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,354 creating build/bdist.linux-armv7l/wheel/motifscan/io 2021-01-21T09:20:06,486 copying build/lib.linux-armv7l-3.7/motifscan/io/utils.py -> build/bdist.linux-armv7l/wheel/motifscan/io 2021-01-21T09:20:06,490 copying build/lib.linux-armv7l-3.7/motifscan/io/__init__.py -> build/bdist.linux-armv7l/wheel/motifscan/io 2021-01-21T09:20:06,495 creating build/bdist.linux-armv7l/wheel/motifscan/cli 2021-01-21T09:20:06,496 copying build/lib.linux-armv7l-3.7/motifscan/cli/scan.py -> build/bdist.linux-armv7l/wheel/motifscan/cli 2021-01-21T09:20:06,501 copying build/lib.linux-armv7l-3.7/motifscan/cli/config.py -> build/bdist.linux-armv7l/wheel/motifscan/cli 2021-01-21T09:20:06,504 copying build/lib.linux-armv7l-3.7/motifscan/cli/motif.py -> build/bdist.linux-armv7l/wheel/motifscan/cli 2021-01-21T09:20:06,507 copying build/lib.linux-armv7l-3.7/motifscan/cli/main.py -> build/bdist.linux-armv7l/wheel/motifscan/cli 2021-01-21T09:20:06,511 copying build/lib.linux-armv7l-3.7/motifscan/cli/genome.py -> build/bdist.linux-armv7l/wheel/motifscan/cli 2021-01-21T09:20:06,513 copying build/lib.linux-armv7l-3.7/motifscan/cli/__init__.py -> build/bdist.linux-armv7l/wheel/motifscan/cli 2021-01-21T09:20:06,516 copying build/lib.linux-armv7l-3.7/motifscan/stats.py -> build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,518 copying build/lib.linux-armv7l-3.7/motifscan/scanner.py -> build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,521 creating build/bdist.linux-armv7l/wheel/motifscan/region 2021-01-21T09:20:06,523 copying build/lib.linux-armv7l-3.7/motifscan/region/utils.py -> build/bdist.linux-armv7l/wheel/motifscan/region 2021-01-21T09:20:06,526 copying build/lib.linux-armv7l-3.7/motifscan/region/parsers.py -> build/bdist.linux-armv7l/wheel/motifscan/region 2021-01-21T09:20:06,528 copying build/lib.linux-armv7l-3.7/motifscan/region/__init__.py -> build/bdist.linux-armv7l/wheel/motifscan/region 2021-01-21T09:20:06,531 copying build/lib.linux-armv7l-3.7/motifscan/config.py -> build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,534 copying build/lib.linux-armv7l-3.7/motifscan/plot.py -> build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,537 copying build/lib.linux-armv7l-3.7/motifscan/logging.py -> build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,540 creating build/bdist.linux-armv7l/wheel/motifscan/genome 2021-01-21T09:20:06,541 copying build/lib.linux-armv7l-3.7/motifscan/genome/annotation.py -> build/bdist.linux-armv7l/wheel/motifscan/genome 2021-01-21T09:20:06,543 copying build/lib.linux-armv7l-3.7/motifscan/genome/databases.py -> build/bdist.linux-armv7l/wheel/motifscan/genome 2021-01-21T09:20:06,546 copying build/lib.linux-armv7l-3.7/motifscan/genome/__init__.py -> build/bdist.linux-armv7l/wheel/motifscan/genome 2021-01-21T09:20:06,550 creating build/bdist.linux-armv7l/wheel/motifscan/motif 2021-01-21T09:20:06,551 copying build/lib.linux-armv7l-3.7/motifscan/motif/databases.py -> build/bdist.linux-armv7l/wheel/motifscan/motif 2021-01-21T09:20:06,554 copying build/lib.linux-armv7l-3.7/motifscan/motif/__init__.py -> build/bdist.linux-armv7l/wheel/motifscan/motif 2021-01-21T09:20:06,557 copying build/lib.linux-armv7l-3.7/motifscan/motif/matrix.py -> build/bdist.linux-armv7l/wheel/motifscan/motif 2021-01-21T09:20:06,560 copying build/lib.linux-armv7l-3.7/motifscan/motif/cscore.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/motifscan/motif 2021-01-21T09:20:06,564 copying build/lib.linux-armv7l-3.7/motifscan/exceptions.py -> build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,567 copying build/lib.linux-armv7l-3.7/motifscan/__init__.py -> build/bdist.linux-armv7l/wheel/motifscan 2021-01-21T09:20:06,569 running install_egg_info 2021-01-21T09:20:06,597 running egg_info 2021-01-21T09:20:06,597 writing motifscan.egg-info/PKG-INFO 2021-01-21T09:20:06,600 writing dependency_links to motifscan.egg-info/dependency_links.txt 2021-01-21T09:20:06,602 writing entry points to motifscan.egg-info/entry_points.txt 2021-01-21T09:20:06,603 writing requirements to motifscan.egg-info/requires.txt 2021-01-21T09:20:06,604 writing top-level names to motifscan.egg-info/top_level.txt 2021-01-21T09:20:06,612 reading manifest file 'motifscan.egg-info/SOURCES.txt' 2021-01-21T09:20:06,617 reading manifest template 'MANIFEST.in' 2021-01-21T09:20:06,637 no previously-included directories found matching 'docs/build' 2021-01-21T09:20:06,643 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2021-01-21T09:20:06,644 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2021-01-21T09:20:06,651 writing manifest file 'motifscan.egg-info/SOURCES.txt' 2021-01-21T09:20:06,653 Copying motifscan.egg-info to build/bdist.linux-armv7l/wheel/motifscan-1.3.0-py3.7.egg-info 2021-01-21T09:20:06,672 running install_scripts 2021-01-21T09:20:06,768 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2021-01-21T09:20:06,775 creating build/bdist.linux-armv7l/wheel/motifscan-1.3.0.dist-info/WHEEL 2021-01-21T09:20:06,778 creating '/tmp/pip-wheel-6w_4fc5b/motifscan-1.3.0-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-01-21T09:20:06,780 adding 'motifscan/__init__.py' 2021-01-21T09:20:06,782 adding 'motifscan/config.py' 2021-01-21T09:20:06,784 adding 'motifscan/exceptions.py' 2021-01-21T09:20:06,785 adding 'motifscan/logging.py' 2021-01-21T09:20:06,787 adding 'motifscan/plot.py' 2021-01-21T09:20:06,788 adding 'motifscan/scanner.py' 2021-01-21T09:20:06,790 adding 'motifscan/stats.py' 2021-01-21T09:20:06,792 adding 'motifscan/cli/__init__.py' 2021-01-21T09:20:06,793 adding 'motifscan/cli/config.py' 2021-01-21T09:20:06,795 adding 'motifscan/cli/genome.py' 2021-01-21T09:20:06,798 adding 'motifscan/cli/main.py' 2021-01-21T09:20:06,800 adding 'motifscan/cli/motif.py' 2021-01-21T09:20:06,802 adding 'motifscan/cli/scan.py' 2021-01-21T09:20:06,805 adding 'motifscan/genome/__init__.py' 2021-01-21T09:20:06,806 adding 'motifscan/genome/annotation.py' 2021-01-21T09:20:06,808 adding 'motifscan/genome/databases.py' 2021-01-21T09:20:06,811 adding 'motifscan/io/__init__.py' 2021-01-21T09:20:06,812 adding 'motifscan/io/utils.py' 2021-01-21T09:20:06,815 adding 'motifscan/motif/__init__.py' 2021-01-21T09:20:06,826 adding 'motifscan/motif/cscore.cpython-37m-arm-linux-gnueabihf.so' 2021-01-21T09:20:06,828 adding 'motifscan/motif/databases.py' 2021-01-21T09:20:06,830 adding 'motifscan/motif/matrix.py' 2021-01-21T09:20:06,832 adding 'motifscan/region/__init__.py' 2021-01-21T09:20:06,834 adding 'motifscan/region/parsers.py' 2021-01-21T09:20:06,836 adding 'motifscan/region/utils.py' 2021-01-21T09:20:06,838 adding 'motifscan-1.3.0.dist-info/LICENSE' 2021-01-21T09:20:06,839 adding 'motifscan-1.3.0.dist-info/METADATA' 2021-01-21T09:20:06,840 adding 'motifscan-1.3.0.dist-info/WHEEL' 2021-01-21T09:20:06,841 adding 'motifscan-1.3.0.dist-info/entry_points.txt' 2021-01-21T09:20:06,842 adding 'motifscan-1.3.0.dist-info/top_level.txt' 2021-01-21T09:20:06,843 adding 'motifscan-1.3.0.dist-info/RECORD' 2021-01-21T09:20:06,845 removing build/bdist.linux-armv7l/wheel 2021-01-21T09:20:06,941 Building wheel for motifscan (setup.py): finished with status 'done' 2021-01-21T09:20:06,944 Created wheel for motifscan: filename=motifscan-1.3.0-cp37-cp37m-linux_armv7l.whl size=66671 sha256=9f3fc69ffc4b8ec465f365c65880db016050eb9f52b5e15bbe7234fa879ab920 2021-01-21T09:20:06,945 Stored in directory: /tmp/pip-ephem-wheel-cache-czg6ixm1/wheels/2f/a4/99/a6c0311d36d821c1bac8fa296c08da5b6ce73e40ebda42f3b7 2021-01-21T09:20:06,947 Successfully built motifscan 2021-01-21T09:20:06,953 Removed build tracker: '/tmp/pip-req-tracker-gcdfhmt1'