2021-01-27T15:59:42,950 Created temporary directory: /tmp/pip-ephem-wheel-cache-7sk1ez8m 2021-01-27T15:59:42,953 Created temporary directory: /tmp/pip-req-tracker-kqpswmbg 2021-01-27T15:59:42,953 Initialized build tracking at /tmp/pip-req-tracker-kqpswmbg 2021-01-27T15:59:42,953 Created build tracker: /tmp/pip-req-tracker-kqpswmbg 2021-01-27T15:59:42,953 Entered build tracker: /tmp/pip-req-tracker-kqpswmbg 2021-01-27T15:59:42,954 Created temporary directory: /tmp/pip-wheel-mhneqcfr 2021-01-27T15:59:42,990 1 location(s) to search for versions of teca: 2021-01-27T15:59:42,990 * https://pypi.org/simple/teca/ 2021-01-27T15:59:42,990 Fetching project page and analyzing links: https://pypi.org/simple/teca/ 2021-01-27T15:59:42,990 Getting page https://pypi.org/simple/teca/ 2021-01-27T15:59:42,992 Found index url https://pypi.org/simple 2021-01-27T15:59:43,083 Found link https://files.pythonhosted.org/packages/0d/dd/3d41710a0b33186020caa67249de6bfecea84a85d2261b1b8dd835369f20/teca-2.2.1.tar.gz#sha256=1291e6900de51641df5db13ff854003c7c7ff2bb4e575c66574acdb7a95ab785 (from https://pypi.org/simple/teca/), version: 2.2.1 2021-01-27T15:59:43,084 Found link https://files.pythonhosted.org/packages/10/27/510206a68b8456016add7c84da0ea738229ccfd9a6eb4ee0324dff0080af/teca-2.2.2.tar.gz#sha256=2d328a5251b719580a0363b9743198ee5d2e6ce29230f8448df36d4ad893c94e (from https://pypi.org/simple/teca/), version: 2.2.2 2021-01-27T15:59:43,084 Found link https://files.pythonhosted.org/packages/5b/94/e269e3adad0096422ae240c78c5253cac9155c1e8afbdceae2218542875d/teca-3.0.0.tar.gz#sha256=dadebfad51b68478bcca62e79bb06901c7f121ccacb8e0018cacf5255a9a025b (from https://pypi.org/simple/teca/), version: 3.0.0 2021-01-27T15:59:43,084 Found link https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 (from https://pypi.org/simple/teca/), version: 4.0.0 2021-01-27T15:59:43,098 Given no hashes to check 1 links for project 'teca': discarding no candidates 2021-01-27T15:59:43,113 Collecting teca==4.0.0 2021-01-27T15:59:43,115 Created temporary directory: /tmp/pip-unpack-g4w9u3ja 2021-01-27T15:59:43,158 Downloading teca-4.0.0.tar.gz (688 kB) 2021-01-27T15:59:44,651 Added teca==4.0.0 from https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 to build tracker '/tmp/pip-req-tracker-kqpswmbg' 2021-01-27T15:59:44,652 Running setup.py (path:/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3/setup.py) egg_info for package teca 2021-01-27T15:59:44,653 Created temporary directory: /tmp/pip-pip-egg-info-98y7ib3d 2021-01-27T15:59:44,654 Running command python setup.py egg_info 2021-01-27T15:59:45,873 running egg_info 2021-01-27T15:59:45,876 creating /tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info 2021-01-27T15:59:45,878 writing /tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info/PKG-INFO 2021-01-27T15:59:45,882 writing dependency_links to /tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info/dependency_links.txt 2021-01-27T15:59:45,884 writing requirements to /tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info/requires.txt 2021-01-27T15:59:45,886 writing top-level names to /tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info/top_level.txt 2021-01-27T15:59:45,888 writing manifest file '/tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info/SOURCES.txt' 2021-01-27T15:59:45,897 reading manifest file '/tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info/SOURCES.txt' 2021-01-27T15:59:45,899 reading manifest template 'MANIFEST.in' 2021-01-27T15:59:46,218 warning: no previously-included files matching '*.pdf' found anywhere in distribution 2021-01-27T15:59:46,221 warning: no previously-included files matching '*.sw?' found anywhere in distribution 2021-01-27T15:59:46,243 writing manifest file '/tmp/pip-pip-egg-info-98y7ib3d/teca.egg-info/SOURCES.txt' 2021-01-27T15:59:46,309 Source in /tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3 has version 4.0.0, which satisfies requirement teca==4.0.0 from https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 2021-01-27T15:59:46,310 Removed teca==4.0.0 from https://files.pythonhosted.org/packages/e5/4a/820ff10f8df871229d44d74b2d31a224323e77d9f5215a2af5b4ec8f21a0/teca-4.0.0.tar.gz#sha256=be094091c7b456d72c5babf671835103f5afab538d687d05b56f8faa2de4c679 from build tracker '/tmp/pip-req-tracker-kqpswmbg' 2021-01-27T15:59:46,314 Created temporary directory: /tmp/pip-unpack-qqrl6utj 2021-01-27T15:59:46,315 Building wheels for collected packages: teca 2021-01-27T15:59:46,319 Created temporary directory: /tmp/pip-wheel-_2_wyyzd 2021-01-27T15:59:46,319 Building wheel for teca (setup.py): started 2021-01-27T15:59:46,320 Destination directory: /tmp/pip-wheel-_2_wyyzd 2021-01-27T15:59:46,320 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_2_wyyzd 2021-01-27T15:59:47,525 running bdist_wheel 2021-01-27T15:59:47,530 running build 2021-01-27T15:59:47,530 running build_ext 2021-01-27T15:59:48,063 -- The C compiler identification is GNU 8.3.0 2021-01-27T15:59:48,513 -- The CXX compiler identification is GNU 8.3.0 2021-01-27T15:59:48,949 -- The Fortran compiler identification is GNU 8.3.0 2021-01-27T15:59:49,046 -- Check for working C compiler: /usr/bin/cc 2021-01-27T15:59:49,512 -- Check for working C compiler: /usr/bin/cc -- works 2021-01-27T15:59:49,516 -- Detecting C compiler ABI info 2021-01-27T15:59:49,999 -- Detecting C compiler ABI info - done 2021-01-27T15:59:50,026 -- Detecting C compile features 2021-01-27T15:59:51,500 -- Detecting C compile features - done 2021-01-27T15:59:51,522 -- Check for working CXX compiler: /usr/bin/c++ 2021-01-27T15:59:52,254 -- Check for working CXX compiler: /usr/bin/c++ -- works 2021-01-27T15:59:52,260 -- Detecting CXX compiler ABI info 2021-01-27T15:59:52,871 -- Detecting CXX compiler ABI info - done 2021-01-27T15:59:52,902 -- Detecting CXX compile features 2021-01-27T15:59:56,335 -- Detecting CXX compile features - done 2021-01-27T15:59:56,376 -- Check for working Fortran compiler: /usr/bin/gfortran 2021-01-27T15:59:56,881 -- Check for working Fortran compiler: /usr/bin/gfortran -- works 2021-01-27T15:59:56,885 -- Detecting Fortran compiler ABI info 2021-01-27T15:59:57,407 -- Detecting Fortran compiler ABI info - done 2021-01-27T15:59:57,439 -- Checking whether /usr/bin/gfortran supports Fortran 90 2021-01-27T15:59:57,944 -- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes 2021-01-27T15:59:57,953 -- Configuring a Release build 2021-01-27T15:59:57,954 -- Check for c++ regex support 2021-01-27T16:00:06,311 -- Check for c++ regex support -- enabled 2021-01-27T16:00:07,477 -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1") 2021-01-27T16:00:11,726 -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1") 2021-01-27T16:00:16,924 -- Found MPI_Fortran: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_usempif08.so (found version "3.1") 2021-01-27T16:00:16,925 -- Found MPI: TRUE (found version "3.1") 2021-01-27T16:00:16,927 -- MPI features -- enabled 2021-01-27T16:00:16,959 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29") 2021-01-27T16:00:17,237 -- NETCDF_LIBRARY-NOTFOUND 2021-01-27T16:00:17,269 -- Could NOT find NetCDF (missing: NETCDF_LIBRARIES NETCDF_INCLUDE_DIRS) 2021-01-27T16:00:17,270 CMake Error at CMakeLists.txt:147 (message): 2021-01-27T16:00:17,270 NetCDF features -- required but not found. set NETCDF_DIR to enable. 2021-01-27T16:00:17,280 -- Configuring incomplete, errors occurred! 2021-01-27T16:00:17,281 See also "/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3/build/temp.linux-armv7l-3.7/CMakeFiles/CMakeOutput.log". 2021-01-27T16:00:17,296 ================================================================ 2021-01-27T16:00:17,296 An error ocured building TECA. This is usually a symptom 2021-01-27T16:00:17,297 of a missing dependency. The error messages above will indicate 2021-01-27T16:00:17,297 which package is missing. Install the development package for 2021-01-27T16:00:17,297 the missing dependency using your system's package manager 2021-01-27T16:00:17,297 ================================================================ 2021-01-27T16:00:17,298 subprocess.CalledProcessError: Command '['cmake', '/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3', '-DCMAKE_INSTALL_PREFIX=/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3/build/lib.linux-armv7l-3.7/teca', '-DLIB_PREFIX=.', '-DREQUIRE_PYTHON=TRUE', '-DTECA_PYTHON_VERSION=3', '-DREQUIRE_UDUNITS=TRUE', '-DREQUIRE_NETCDF=TRUE', '-DREQUIRE_BOOST=TRUE', '-DREQUIRE_OPENSSL=FALSE', '-DREQUIRE_MPI=TRUE', '-DENABLE_CRAY_MPICH=FALSE', '-DREQUIRE_NETCDF_MPI=TRUE', '-DREQUIRE_TECA_DATA=FALSE', '-DTECA_VERSION=4.0.0(PyPi)', '-DCMAKE_BUILD_TYPE=Release']' returned non-zero exit status 1. 2021-01-27T16:00:17,365 Building wheel for teca (setup.py): finished with status 'error' 2021-01-27T16:00:17,366 ERROR: Failed building wheel for teca 2021-01-27T16:00:17,367 Running setup.py clean for teca 2021-01-27T16:00:17,367 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-mhneqcfr/teca_1a714b278050400e9bdc305e4ab788c3/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-01-27T16:00:18,554 running clean 2021-01-27T16:00:18,556 removing 'build/temp.linux-armv7l-3.7' (and everything under it) 2021-01-27T16:00:18,577 'build/lib.linux-armv7l-3.7' does not exist -- can't clean it 2021-01-27T16:00:18,577 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-01-27T16:00:18,578 'build/scripts-3.7' does not exist -- can't clean it 2021-01-27T16:00:18,578 removing 'build' 2021-01-27T16:00:18,644 Failed to build teca 2021-01-27T16:00:18,645 ERROR: Failed to build one or more wheels 2021-01-27T16:00:18,645 Exception information: 2021-01-27T16:00:18,645 Traceback (most recent call last): 2021-01-27T16:00:18,645 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 189, in _main 2021-01-27T16:00:18,645 status = self.run(options, args) 2021-01-27T16:00:18,645 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/req_command.py", line 178, in wrapper 2021-01-27T16:00:18,645 return func(self, options, args) 2021-01-27T16:00:18,645 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 191, in run 2021-01-27T16:00:18,645 "Failed to build one or more wheels" 2021-01-27T16:00:18,645 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-01-27T16:00:18,648 Removed build tracker: '/tmp/pip-req-tracker-kqpswmbg'