2021-01-29T17:06:33,179 Created temporary directory: /tmp/pip-ephem-wheel-cache-i6r4b0a4 2021-01-29T17:06:33,182 Created temporary directory: /tmp/pip-req-tracker-2lba64dh 2021-01-29T17:06:33,183 Initialized build tracking at /tmp/pip-req-tracker-2lba64dh 2021-01-29T17:06:33,183 Created build tracker: /tmp/pip-req-tracker-2lba64dh 2021-01-29T17:06:33,183 Entered build tracker: /tmp/pip-req-tracker-2lba64dh 2021-01-29T17:06:33,184 Created temporary directory: /tmp/pip-wheel-h268zrug 2021-01-29T17:06:33,213 1 location(s) to search for versions of rdkit-to-params: 2021-01-29T17:06:33,213 * https://pypi.org/simple/rdkit-to-params/ 2021-01-29T17:06:33,213 Fetching project page and analyzing links: https://pypi.org/simple/rdkit-to-params/ 2021-01-29T17:06:33,214 Getting page https://pypi.org/simple/rdkit-to-params/ 2021-01-29T17:06:33,215 Found index url https://pypi.org/simple 2021-01-29T17:06:33,306 Found link https://files.pythonhosted.org/packages/ef/e8/7a8a812f8d2954b8acdb661bcc9ee5a9d67dae96f96a66d75de2e90282d3/rdkit_to_params-1.tar.gz#sha256=56b7e26a5622a7ac90e54b8a3f4fab79cc8bb63b102aafb3f8c17bcf26df2df3 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1 2021-01-29T17:06:33,307 Found link https://files.pythonhosted.org/packages/54/ce/55e4c99a7500a7db8e785ee282208e50ee8dc541089185144622c9cecdcc/rdkit_to_params-1.0.1.tar.gz#sha256=d11f52ee51e9f79cf3befa26a9669fe7c99be41fff8c654293e5a63136b844f0 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.1 2021-01-29T17:06:33,308 Found link https://files.pythonhosted.org/packages/14/06/f2f72e757eb7deea040c09abef0173a5e6f1023de515afee19d060b9a5f1/rdkit_to_params-1.0.2.tar.gz#sha256=5e169dd2a511f6d4a6747b46010b0d1a165d1ee5a34dd16614b87289d0d344e5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.2 2021-01-29T17:06:33,308 Found link https://files.pythonhosted.org/packages/cd/23/11617c465b9f3dc6ca9f52356ff4ac3e2f80211800b4205b8123a68a7f73/rdkit_to_params-1.0.4.tar.gz#sha256=74031df79149b4069dc924aa73df9e62dba77d7200473ad02c320c2cfd572aa5 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.4 2021-01-29T17:06:33,309 Found link https://files.pythonhosted.org/packages/53/71/fa36800525e407ac79c355f6e97fefdb808964a7df1e43a088d396654c19/rdkit_to_params-1.0.5.tar.gz#sha256=39461952a6c30a27a23b57a99ca389e4b28d02a53e29d60ad3e9a86395965b3a (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.0.5 2021-01-29T17:06:33,309 Found link https://files.pythonhosted.org/packages/45/0b/867d72723c27a00cc7f330417d6f7268c777b8795bd946fc89786a0f39b0/rdkit_to_params-1.1.0.tar.gz#sha256=c182be58feb386ccb242ccfea7910d18ef6efefbf682c3ecc85088b2c053ba91 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.0 2021-01-29T17:06:33,310 Found link https://files.pythonhosted.org/packages/5b/52/a15ce15be2ad2bd3606c4d9cc0055261cd7eafd098cf9a31dee9f931290a/rdkit_to_params-1.1.1.tar.gz#sha256=4b3a7e70b33bdfc7994cfad00199f794e38f6c9cf88d82ceb78eddf1f2dace9d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.1 2021-01-29T17:06:33,310 Found link https://files.pythonhosted.org/packages/1d/2b/97d12fe38813b96f303f04ed4e2e77f5ee540ad683ff79a21c822c047298/rdkit_to_params-1.1.2.tar.gz#sha256=1967c3716553dd6a34ae8805adc65cbd49646ad28b9386dff094b0dd824283ba (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.2 2021-01-29T17:06:33,311 Found link https://files.pythonhosted.org/packages/cf/11/4a451d52b8540a19ae08f28cbec4db146f4d11760133163a94808498f433/rdkit_to_params-1.1.3.tar.gz#sha256=5cdd2f3f7f0751bd2065756ac36147254ca6d87b835828a1f7e5bad1500d7450 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.3 2021-01-29T17:06:33,311 Found link https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4b0 2021-01-29T17:06:33,312 Found link https://files.pythonhosted.org/packages/cd/9d/b405411dd2b049a635c2629fd62cc23a5b881bf85db16557d8bd02a85f8a/rdkit_to_params-1.1.4.tar.gz#sha256=173a7a029628cccba4ccd041b60dd8144dbc884fd9430f7ffb64a5153ad2531d (from https://pypi.org/simple/rdkit-to-params/) (requires-python:>3.6), version: 1.1.4 2021-01-29T17:06:33,327 Given no hashes to check 1 links for project 'rdkit-to-params': discarding no candidates 2021-01-29T17:06:33,342 Collecting rdkit-to-params==1.1.4b0 2021-01-29T17:06:33,344 Created temporary directory: /tmp/pip-unpack-9ef04yfc 2021-01-29T17:06:33,533 Downloading rdkit_to_params-1.1.4b0.tar.gz (40 kB) 2021-01-29T17:06:33,613 Added rdkit-to-params==1.1.4b0 from https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 to build tracker '/tmp/pip-req-tracker-2lba64dh' 2021-01-29T17:06:33,614 Running setup.py (path:/tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690/setup.py) egg_info for package rdkit-to-params 2021-01-29T17:06:33,615 Created temporary directory: /tmp/pip-pip-egg-info-r9nxyimy 2021-01-29T17:06:33,615 Running command python setup.py egg_info 2021-01-29T17:06:34,576 running egg_info 2021-01-29T17:06:34,579 creating /tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info 2021-01-29T17:06:34,580 writing /tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info/PKG-INFO 2021-01-29T17:06:34,583 writing dependency_links to /tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info/dependency_links.txt 2021-01-29T17:06:34,585 writing entry points to /tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info/entry_points.txt 2021-01-29T17:06:34,587 writing top-level names to /tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info/top_level.txt 2021-01-29T17:06:34,589 writing manifest file '/tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info/SOURCES.txt' 2021-01-29T17:06:34,737 reading manifest file '/tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info/SOURCES.txt' 2021-01-29T17:06:34,740 writing manifest file '/tmp/pip-pip-egg-info-r9nxyimy/rdkit_to_params.egg-info/SOURCES.txt' 2021-01-29T17:06:34,742 /tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation. 2021-01-29T17:06:34,742 'conda install -c conda-forge rdkit or ' + 2021-01-29T17:06:34,742 /tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-01-29T17:06:34,742 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-01-29T17:06:34,743 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing '1.1.4b' to '1.1.4b0' 2021-01-29T17:06:34,743 warnings.warn(tmpl.format(**locals())) 2021-01-29T17:06:34,803 Source in /tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690 has version 1.1.4b0, which satisfies requirement rdkit-to-params==1.1.4b0 from https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 2021-01-29T17:06:34,804 Removed rdkit-to-params==1.1.4b0 from https://files.pythonhosted.org/packages/1f/86/5cdd42d226f7f8dafa43fc9f891a39f8a1689648cfdf0b3653f9fea4c9e9/rdkit_to_params-1.1.4b0.tar.gz#sha256=c1b4c083274f84ff5394d17728cd409fa87418618fdf4c146c47e2947f9c7be7 from build tracker '/tmp/pip-req-tracker-2lba64dh' 2021-01-29T17:06:34,812 Created temporary directory: /tmp/pip-unpack-dqppwe_3 2021-01-29T17:06:34,813 Building wheels for collected packages: rdkit-to-params 2021-01-29T17:06:34,817 Created temporary directory: /tmp/pip-wheel-b4sy47hy 2021-01-29T17:06:34,818 Building wheel for rdkit-to-params (setup.py): started 2021-01-29T17:06:34,818 Destination directory: /tmp/pip-wheel-b4sy47hy 2021-01-29T17:06:34,819 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-b4sy47hy 2021-01-29T17:06:35,618 /tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690/setup.py:29: UserWarning: Albeit optional, a lot of this code relies on rdkit which cannot be pip installed.To install try either conda install -c conda-forge rdkit or sudo apt-get/brew install python3-rdkit or visit rdkit documentation. 2021-01-29T17:06:35,618 'conda install -c conda-forge rdkit or ' + 2021-01-29T17:06:35,619 /tmp/pip-wheel-h268zrug/rdkit-to-params_a0129123e7cf44f08f5fab3e73cb1690/setup.py:33: UserWarning: The minimisation part of this code uses pyrosetta, which has to be downloaded from the Rosetta software site due to licencing. Without it only the classes Monster and Rectifier will work 2021-01-29T17:06:35,619 warn('The minimisation part of this code uses pyrosetta, which has to be downloaded from ' + 2021-01-29T17:06:35,737 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:461: UserWarning: Normalizing '1.1.4b' to '1.1.4b0' 2021-01-29T17:06:35,738 warnings.warn(tmpl.format(**locals())) 2021-01-29T17:06:35,769 running bdist_wheel 2021-01-29T17:06:35,776 running build 2021-01-29T17:06:35,776 running build_py 2021-01-29T17:06:35,910 creating build 2021-01-29T17:06:35,911 creating build/lib 2021-01-29T17:06:35,911 creating build/lib/rdkit_to_params 2021-01-29T17:06:35,913 copying rdkit_to_params/_io_mixin.py -> build/lib/rdkit_to_params 2021-01-29T17:06:35,915 copying rdkit_to_params/__init__.py -> build/lib/rdkit_to_params 2021-01-29T17:06:35,917 copying rdkit_to_params/constraint.py -> build/lib/rdkit_to_params 2021-01-29T17:06:35,920 copying rdkit_to_params/entries.py -> build/lib/rdkit_to_params 2021-01-29T17:06:35,922 copying rdkit_to_params/_init_mixin.py -> build/lib/rdkit_to_params 2021-01-29T17:06:35,924 copying rdkit_to_params/_pyrosetta_mixin.py -> build/lib/rdkit_to_params 2021-01-29T17:06:35,929 installing to build/bdist.linux-armv7l/wheel 2021-01-29T17:06:35,929 running install 2021-01-29T17:06:35,930 running install_lib 2021-01-29T17:06:35,934 creating build/bdist.linux-armv7l 2021-01-29T17:06:35,935 creating build/bdist.linux-armv7l/wheel 2021-01-29T17:06:35,937 creating build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-01-29T17:06:35,937 copying build/lib/rdkit_to_params/_io_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-01-29T17:06:35,940 copying build/lib/rdkit_to_params/__init__.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-01-29T17:06:35,942 copying build/lib/rdkit_to_params/constraint.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-01-29T17:06:35,946 copying build/lib/rdkit_to_params/entries.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-01-29T17:06:35,948 copying build/lib/rdkit_to_params/_init_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-01-29T17:06:35,950 copying build/lib/rdkit_to_params/_pyrosetta_mixin.py -> build/bdist.linux-armv7l/wheel/rdkit_to_params 2021-01-29T17:06:35,952 running install_egg_info 2021-01-29T17:06:35,976 running egg_info 2021-01-29T17:06:35,977 writing rdkit_to_params.egg-info/PKG-INFO 2021-01-29T17:06:35,980 writing dependency_links to rdkit_to_params.egg-info/dependency_links.txt 2021-01-29T17:06:35,982 writing entry points to rdkit_to_params.egg-info/entry_points.txt 2021-01-29T17:06:35,983 writing top-level names to rdkit_to_params.egg-info/top_level.txt 2021-01-29T17:06:35,988 reading manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-01-29T17:06:35,992 writing manifest file 'rdkit_to_params.egg-info/SOURCES.txt' 2021-01-29T17:06:35,994 Copying rdkit_to_params.egg-info to build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.4b0-py3.7.egg-info 2021-01-29T17:06:36,007 running install_scripts 2021-01-29T17:06:36,095 creating build/bdist.linux-armv7l/wheel/rdkit_to_params-1.1.4b0.dist-info/WHEEL 2021-01-29T17:06:36,098 creating '/tmp/pip-wheel-b4sy47hy/rdkit_to_params-1.1.4b0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-01-29T17:06:36,102 adding 'rdkit_to_params/__init__.py' 2021-01-29T17:06:36,104 adding 'rdkit_to_params/_init_mixin.py' 2021-01-29T17:06:36,105 adding 'rdkit_to_params/_io_mixin.py' 2021-01-29T17:06:36,107 adding 'rdkit_to_params/_pyrosetta_mixin.py' 2021-01-29T17:06:36,110 adding 'rdkit_to_params/constraint.py' 2021-01-29T17:06:36,112 adding 'rdkit_to_params/entries.py' 2021-01-29T17:06:36,116 adding 'rdkit_to_params-1.1.4b0.dist-info/METADATA' 2021-01-29T17:06:36,118 adding 'rdkit_to_params-1.1.4b0.dist-info/WHEEL' 2021-01-29T17:06:36,119 adding 'rdkit_to_params-1.1.4b0.dist-info/entry_points.txt' 2021-01-29T17:06:36,120 adding 'rdkit_to_params-1.1.4b0.dist-info/top_level.txt' 2021-01-29T17:06:36,120 adding 'rdkit_to_params-1.1.4b0.dist-info/RECORD' 2021-01-29T17:06:36,121 removing build/bdist.linux-armv7l/wheel 2021-01-29T17:06:36,193 Building wheel for rdkit-to-params (setup.py): finished with status 'done' 2021-01-29T17:06:36,196 Created wheel for rdkit-to-params: filename=rdkit_to_params-1.1.4b0-py3-none-any.whl size=24430 sha256=68fba99b2bf0d110eba43fbc33896c770b3713f0b37736051b8c04e4ae23ad8b 2021-01-29T17:06:36,196 Stored in directory: /tmp/pip-ephem-wheel-cache-i6r4b0a4/wheels/f2/97/0b/054b4085b262f043756e47df4e77cd55d0b0c74a8bccf9f85c 2021-01-29T17:06:36,206 Successfully built rdkit-to-params 2021-01-29T17:06:36,211 Removed build tracker: '/tmp/pip-req-tracker-2lba64dh'