2021-01-29T18:46:20,305 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-29T18:46:21,011 Created temporary directory: /tmp/pip-ephem-wheel-cache-pb4qb3h3
2021-01-29T18:46:21,016 Created temporary directory: /tmp/pip-req-tracker-tnj4d_ff
2021-01-29T18:46:21,017 Initialized build tracking at /tmp/pip-req-tracker-tnj4d_ff
2021-01-29T18:46:21,017 Created build tracker: /tmp/pip-req-tracker-tnj4d_ff
2021-01-29T18:46:21,018 Entered build tracker: /tmp/pip-req-tracker-tnj4d_ff
2021-01-29T18:46:21,019 Created temporary directory: /tmp/pip-wheel-dq9qc9af
2021-01-29T18:46:21,080 Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
2021-01-29T18:46:21,084 2 location(s) to search for versions of rcsb-utils-io:
2021-01-29T18:46:21,084 * https://pypi.org/simple/rcsb-utils-io/
2021-01-29T18:46:21,084 * https://pypi.ngc.nvidia.com/rcsb-utils-io/
2021-01-29T18:46:21,085 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-io/
2021-01-29T18:46:21,087 Getting page https://pypi.org/simple/rcsb-utils-io/
2021-01-29T18:46:21,091 Found index url https://pypi.org/simple
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2021-01-29T18:46:21,851   Found link https://files.pythonhosted.org/packages/2c/27/8eb9d8aec41716822a708ae1e713905fedfaea1ae58c5e3635c60e719aec/rcsb.utils.io-0.84-py2.py3-none-any.whl#sha256=219610f05713e5b7f3abd17757a7947dc8dab92bbcd44e20f25505dd8c7c28a7 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.84
2021-01-29T18:46:21,852   Found link https://files.pythonhosted.org/packages/5c/45/33be2731d7e32dda6e43bb3c30b8663b0cab75f7c6d887f78305a6bbbc31/rcsb.utils.io-0.84.tar.gz#sha256=01a91f5c2c53f2eb03349c15b970e55c7ef59289ae7b21c04ff4bc9cfdfacb7f (from https://pypi.org/simple/rcsb-utils-io/), version: 0.84
2021-01-29T18:46:21,853   Found link https://files.pythonhosted.org/packages/be/d5/ef96a6daac0922a71ba8bba2ceaa80f3c31dddf2edee2bed6c0dbfb4d4b3/rcsb.utils.io-0.85.tar.gz#sha256=340ae463fe301b5fb441ab7d20590d205785cb85dd7fa7062c041400d41a7785 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.85
2021-01-29T18:46:21,854   Found link https://files.pythonhosted.org/packages/66/88/491404d1520c2f43b0b63cd4ae4f80893ce809ecfe1f492be44fed4d5bce/rcsb.utils.io-0.86.tar.gz#sha256=cfc6124828c0d30ceb133f6c55d6a82dee9046c92fea699f891d3809fbcbf98b (from https://pypi.org/simple/rcsb-utils-io/), version: 0.86
2021-01-29T18:46:21,855   Found link https://files.pythonhosted.org/packages/07/a1/f0418a61eb598e3a7eca4a510f7d10ad3068714795fda318acf9dae06b14/rcsb.utils.io-0.87.tar.gz#sha256=4ddd4e3ab56898bbf9a9a6fbcd97197b7787209d9aa9735a052073e6e7a46006 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.87
2021-01-29T18:46:21,856   Found link https://files.pythonhosted.org/packages/63/50/51561974332cede710526ffe7b04044cb1f8489cbced008175b8fa33b676/rcsb.utils.io-0.88.tar.gz#sha256=438235865135f06f1171f764af0501dcffdb7dfd90ade55a5f732acbe84d9127 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.88
2021-01-29T18:46:21,857   Found link https://files.pythonhosted.org/packages/76/e8/cfadda42810526c8e13302a013f2e406da5bcc04568a7a7c0e8522881a90/rcsb.utils.io-0.89.tar.gz#sha256=43b45b7eddab477c8d348d31ca81af82946b3990c47298330136e86ec49de21d (from https://pypi.org/simple/rcsb-utils-io/), version: 0.89
2021-01-29T18:46:21,858   Found link https://files.pythonhosted.org/packages/ef/d9/bb3c093beb77fde8e276f3683310c304bdaa05bd09f725338ce48a954536/rcsb.utils.io-0.90.tar.gz#sha256=304f81533c0f1761220bc0defb971f9487ce099a58bf2ecc232c3773a3446b2c (from https://pypi.org/simple/rcsb-utils-io/), version: 0.90
2021-01-29T18:46:21,859   Found link https://files.pythonhosted.org/packages/0f/cc/903d34c5275a4bce0df3e0d4e749210444842d73f67899c9d75d8e16556b/rcsb.utils.io-0.91.tar.gz#sha256=9d19ffacef0ff8e4ec05432aeb10dd191afd4f0c220dc0c541c2a1a0faa9ffb8 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.91
2021-01-29T18:46:21,860   Found link https://files.pythonhosted.org/packages/73/0a/121275705deb6ca9341aabeb7d8e5295150353ba74f5e6a9902cd72873db/rcsb.utils.io-0.92.tar.gz#sha256=bc1cc50b7752d631b73b4accccd36003d20f2253a3c37bedba95e786e4897e8d (from https://pypi.org/simple/rcsb-utils-io/), version: 0.92
2021-01-29T18:46:21,861   Found link https://files.pythonhosted.org/packages/4b/a0/927f5344d2ce0e937f7682d305c62de945799d09148a7633e4d154b87119/rcsb.utils.io-0.93.tar.gz#sha256=680d76bb52cbd8e832c21b73dfea9a4df59d008d163a620307f613cf94353db1 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.93
2021-01-29T18:46:21,862   Found link https://files.pythonhosted.org/packages/b5/9d/a7680f1a20d9c53ad32e7a4d297897e2c43259d46e98b82788fe713ce650/rcsb.utils.io-0.94.tar.gz#sha256=76217444e94b8e61abc02302fa4a568a787d59a784b8bc2e285377bee4dd240e (from https://pypi.org/simple/rcsb-utils-io/), version: 0.94
2021-01-29T18:46:21,863   Found link https://files.pythonhosted.org/packages/1d/89/83e1b43f37119230edc73a21271edca1ea15541805a7a6f2c75ca62cfb57/rcsb.utils.io-0.95.tar.gz#sha256=97860914579377fa06396ba69d4a25bf27c19394bb8eae3b4ce68d6996e9e4a6 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.95
2021-01-29T18:46:21,864   Found link https://files.pythonhosted.org/packages/b7/4c/b8f291404b3f9c4cc298ed2b3ec290723e579d6d8b63b572b43772e02e96/rcsb.utils.io-0.96.tar.gz#sha256=ed789fc14a40b1297a46a18c11bd41465d21b8db4e77d94ad40499e788cdc80a (from https://pypi.org/simple/rcsb-utils-io/), version: 0.96
2021-01-29T18:46:21,864   Found link https://files.pythonhosted.org/packages/ca/d9/4edc06fd4a6060b13a4946c46a7c1a14874e6fea31e588fc6f5be5d97c1a/rcsb.utils.io-0.97.tar.gz#sha256=c8c0426e9f5c867968aeb7aa5fd2ad48cef782853a1612d5906d53a767862243 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.97
2021-01-29T18:46:21,865   Found link https://files.pythonhosted.org/packages/66/2c/30caec87cb56569b6fab30e0ab986807cae29771cb3596ad27298958b431/rcsb.utils.io-0.98.tar.gz#sha256=c5316601a36c627f3468fc8acae6336dc251037a26b0596354907a75354c14fd (from https://pypi.org/simple/rcsb-utils-io/), version: 0.98
2021-01-29T18:46:21,866   Found link https://files.pythonhosted.org/packages/05/96/ef59130abd39948d7e21adbedc4b3bbf1531a8ead93aad5b24e5938d253b/rcsb.utils.io-0.99.tar.gz#sha256=5ad80c48b234b905ad4eb8012536ef4ed5e52aab6060a604c0466cdf544fe647 (from https://pypi.org/simple/rcsb-utils-io/), version: 0.99
2021-01-29T18:46:21,867 Fetching project page and analyzing links: https://pypi.ngc.nvidia.com/rcsb-utils-io/
2021-01-29T18:46:21,868 Getting page https://pypi.ngc.nvidia.com/rcsb-utils-io/
2021-01-29T18:46:21,871 Found index url https://pypi.ngc.nvidia.com
2021-01-29T18:46:22,553 Could not fetch URL https://pypi.ngc.nvidia.com/rcsb-utils-io/: 404 Client Error: Not Found for url: https://developer.download.nvidia.com/compute/redist/rcsb-utils-io/ - skipping
2021-01-29T18:46:22,632 Given no hashes to check 1 links for project 'rcsb-utils-io': discarding no candidates
2021-01-29T18:46:22,670 Collecting rcsb-utils-io==0.99
2021-01-29T18:46:22,674   Created temporary directory: /tmp/pip-unpack-xa53ppiu
2021-01-29T18:46:22,903   Downloading rcsb.utils.io-0.99.tar.gz (30 kB)
2021-01-29T18:46:23,133   Added rcsb-utils-io==0.99 from https://files.pythonhosted.org/packages/05/96/ef59130abd39948d7e21adbedc4b3bbf1531a8ead93aad5b24e5938d253b/rcsb.utils.io-0.99.tar.gz#sha256=5ad80c48b234b905ad4eb8012536ef4ed5e52aab6060a604c0466cdf544fe647 to build tracker '/tmp/pip-req-tracker-tnj4d_ff'
2021-01-29T18:46:23,135     Running setup.py (path:/tmp/pip-wheel-dq9qc9af/rcsb-utils-io_e411619376fa44e898d8ad2372629b6f/setup.py) egg_info for package rcsb-utils-io
2021-01-29T18:46:23,137     Created temporary directory: /tmp/pip-pip-egg-info-m25j3xl8
2021-01-29T18:46:23,137     Running command python setup.py egg_info
2021-01-29T18:46:25,627     running egg_info
2021-01-29T18:46:25,633     creating /tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info
2021-01-29T18:46:25,637     writing /tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/PKG-INFO
2021-01-29T18:46:25,643     writing entry points to /tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/entry_points.txt
2021-01-29T18:46:25,646     writing requirements to /tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/requires.txt
2021-01-29T18:46:25,648     writing dependency_links to /tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/dependency_links.txt
2021-01-29T18:46:25,650     writing top-level names to /tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/top_level.txt
2021-01-29T18:46:25,654     writing manifest file '/tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/SOURCES.txt'
2021-01-29T18:46:26,031     reading manifest file '/tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/SOURCES.txt'
2021-01-29T18:46:26,035     reading manifest template 'MANIFEST.in'
2021-01-29T18:46:26,043     writing manifest file '/tmp/pip-pip-egg-info-m25j3xl8/rcsb.utils.io.egg-info/SOURCES.txt'
2021-01-29T18:46:26,180   Source in /tmp/pip-wheel-dq9qc9af/rcsb-utils-io_e411619376fa44e898d8ad2372629b6f has version 0.99, which satisfies requirement rcsb-utils-io==0.99 from https://files.pythonhosted.org/packages/05/96/ef59130abd39948d7e21adbedc4b3bbf1531a8ead93aad5b24e5938d253b/rcsb.utils.io-0.99.tar.gz#sha256=5ad80c48b234b905ad4eb8012536ef4ed5e52aab6060a604c0466cdf544fe647
2021-01-29T18:46:26,181   Removed rcsb-utils-io==0.99 from https://files.pythonhosted.org/packages/05/96/ef59130abd39948d7e21adbedc4b3bbf1531a8ead93aad5b24e5938d253b/rcsb.utils.io-0.99.tar.gz#sha256=5ad80c48b234b905ad4eb8012536ef4ed5e52aab6060a604c0466cdf544fe647 from build tracker '/tmp/pip-req-tracker-tnj4d_ff'
2021-01-29T18:46:26,189 Created temporary directory: /tmp/pip-unpack-g2qmhlzx
2021-01-29T18:46:26,191 Building wheels for collected packages: rcsb-utils-io
2021-01-29T18:46:26,200   Created temporary directory: /tmp/pip-wheel-y7qfeo7c
2021-01-29T18:46:26,201   Building wheel for rcsb-utils-io (setup.py): started
2021-01-29T18:46:26,202   Destination directory: /tmp/pip-wheel-y7qfeo7c
2021-01-29T18:46:26,202   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-dq9qc9af/rcsb-utils-io_e411619376fa44e898d8ad2372629b6f/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-dq9qc9af/rcsb-utils-io_e411619376fa44e898d8ad2372629b6f/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-y7qfeo7c
2021-01-29T18:46:28,704   running bdist_wheel
2021-01-29T18:46:28,720   running build
2021-01-29T18:46:28,721   running build_py
2021-01-29T18:46:29,069   creating build
2021-01-29T18:46:29,070   creating build/lib
2021-01-29T18:46:29,071   creating build/lib/rcsb
2021-01-29T18:46:29,074   copying rcsb/__init__.py -> build/lib/rcsb
2021-01-29T18:46:29,079   creating build/lib/rcsb/utils
2021-01-29T18:46:29,081   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2021-01-29T18:46:29,088   creating build/lib/rcsb/utils/io
2021-01-29T18:46:29,091   copying rcsb/utils/io/SftpUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,097   copying rcsb/utils/io/CacheUtils.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,102   copying rcsb/utils/io/UrlRequestUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,110   copying rcsb/utils/io/IoUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,120   copying rcsb/utils/io/FastaUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,126   copying rcsb/utils/io/ProcessStatusUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,132   copying rcsb/utils/io/ExecUtils.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,137   copying rcsb/utils/io/IndexUtils.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,144   copying rcsb/utils/io/HashableDict.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,150   copying rcsb/utils/io/MarshalUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,157   copying rcsb/utils/io/FileUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,166   copying rcsb/utils/io/decorators.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,173   copying rcsb/utils/io/CryptUtils.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,179   copying rcsb/utils/io/__init__.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,184   copying rcsb/utils/io/SingletonClass.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,191   copying rcsb/utils/io/StashUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,197   copying rcsb/utils/io/TimeUtil.py -> build/lib/rcsb/utils/io
2021-01-29T18:46:29,235   installing to build/bdist.linux-armv7l/wheel
2021-01-29T18:46:29,235   running install
2021-01-29T18:46:29,237   running install_lib
2021-01-29T18:46:29,245   creating build/bdist.linux-armv7l
2021-01-29T18:46:29,246   creating build/bdist.linux-armv7l/wheel
2021-01-29T18:46:29,250   creating build/bdist.linux-armv7l/wheel/rcsb
2021-01-29T18:46:29,253   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-29T18:46:29,257   creating build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,259   copying build/lib/rcsb/utils/io/SftpUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,265   copying build/lib/rcsb/utils/io/CacheUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,269   copying build/lib/rcsb/utils/io/UrlRequestUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,277   copying build/lib/rcsb/utils/io/IoUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,286   copying build/lib/rcsb/utils/io/FastaUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,293   copying build/lib/rcsb/utils/io/ProcessStatusUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,300   copying build/lib/rcsb/utils/io/ExecUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,306   copying build/lib/rcsb/utils/io/IndexUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,313   copying build/lib/rcsb/utils/io/HashableDict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,318   copying build/lib/rcsb/utils/io/MarshalUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,325   copying build/lib/rcsb/utils/io/FileUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,334   copying build/lib/rcsb/utils/io/decorators.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,341   copying build/lib/rcsb/utils/io/CryptUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,347   copying build/lib/rcsb/utils/io/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,353   copying build/lib/rcsb/utils/io/SingletonClass.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,358   copying build/lib/rcsb/utils/io/StashUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,365   copying build/lib/rcsb/utils/io/TimeUtil.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/io
2021-01-29T18:46:29,371   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-29T18:46:29,377   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2021-01-29T18:46:29,381   running install_egg_info
2021-01-29T18:46:29,430   running egg_info
2021-01-29T18:46:29,431   writing rcsb.utils.io.egg-info/PKG-INFO
2021-01-29T18:46:29,436   writing dependency_links to rcsb.utils.io.egg-info/dependency_links.txt
2021-01-29T18:46:29,438   writing entry points to rcsb.utils.io.egg-info/entry_points.txt
2021-01-29T18:46:29,440   writing top-level names to rcsb.utils.io.egg-info/top_level.txt
2021-01-29T18:46:29,443   writing requirements to rcsb.utils.io.egg-info/requires.txt
2021-01-29T18:46:29,456   reading manifest file 'rcsb.utils.io.egg-info/SOURCES.txt'
2021-01-29T18:46:29,461   reading manifest template 'MANIFEST.in'
2021-01-29T18:46:29,470   writing manifest file 'rcsb.utils.io.egg-info/SOURCES.txt'
2021-01-29T18:46:29,474   Copying rcsb.utils.io.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.io-0.99-py3.5.egg-info
2021-01-29T18:46:29,511   running install_scripts
2021-01-29T18:46:29,752   creating build/bdist.linux-armv7l/wheel/rcsb.utils.io-0.99.dist-info/WHEEL
2021-01-29T18:46:30,057   Building wheel for rcsb-utils-io (setup.py): finished with status 'done'
2021-01-29T18:46:30,062   Created wheel for rcsb-utils-io: filename=rcsb.utils.io-0.99-py2.py3-none-any.whl size=35257 sha256=12b89ed8e2e915d9e8164bb27d70a78945a0d20754dffe7df1192aa4af4c08b1
2021-01-29T18:46:30,063   Stored in directory: /tmp/pip-ephem-wheel-cache-pb4qb3h3/wheels/50/76/b4/574278e2f88e64921150cb6916fabd56197c17a5d99839c19d
2021-01-29T18:46:30,082 Successfully built rcsb-utils-io
2021-01-29T18:46:30,093 Removed build tracker: '/tmp/pip-req-tracker-tnj4d_ff'