2021-01-31T12:05:08,341 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-31T12:05:09,011 Created temporary directory: /tmp/pip-ephem-wheel-cache-vz5alkkj
2021-01-31T12:05:09,016 Created temporary directory: /tmp/pip-req-tracker-eyqjpb3n
2021-01-31T12:05:09,016 Initialized build tracking at /tmp/pip-req-tracker-eyqjpb3n
2021-01-31T12:05:09,017 Created build tracker: /tmp/pip-req-tracker-eyqjpb3n
2021-01-31T12:05:09,017 Entered build tracker: /tmp/pip-req-tracker-eyqjpb3n
2021-01-31T12:05:09,019 Created temporary directory: /tmp/pip-wheel-5msb7m0e
2021-01-31T12:05:09,091 1 location(s) to search for versions of dark-matter:
2021-01-31T12:05:09,091 * https://pypi.org/simple/dark-matter/
2021-01-31T12:05:09,092 Fetching project page and analyzing links: https://pypi.org/simple/dark-matter/
2021-01-31T12:05:09,094 Getting page https://pypi.org/simple/dark-matter/
2021-01-31T12:05:09,099 Found index url https://pypi.org/simple
2021-01-31T12:05:09,783   Found link https://files.pythonhosted.org/packages/7a/5d/5704534d2e83673ec3c8534b39fe1a3f071291761d421803f6b2f04ca6b3/dark-matter-1.0.0.tar.gz#sha256=e915679610d0e94ca32b047d9ef8db6bb16aca43edbba1f7ea13d8f9a00b77d7 (from https://pypi.org/simple/dark-matter/), version: 1.0.0
2021-01-31T12:05:09,784   Found link https://files.pythonhosted.org/packages/4a/50/cc5fbbe75b550d6819af04e15ffc633d99b636f2e2d3c22ca4fc09ba2380/dark-matter-1.0.11.tar.gz#sha256=4157ac389269821b5c3a2de3b32922bf437df79e858f2ae8c7293479d393c90b (from https://pypi.org/simple/dark-matter/), version: 1.0.11
2021-01-31T12:05:09,786   Found link https://files.pythonhosted.org/packages/12/38/d44b5b2e9c08c507a583accb8ee246ce0f98a57c553d06e0199943d0dbf4/dark-matter-1.0.12.tar.gz#sha256=4cde134f526e38562547db4df9069bf9ae04564c92fdfc58cb17593934944861 (from https://pypi.org/simple/dark-matter/), version: 1.0.12
2021-01-31T12:05:09,787   Found link https://files.pythonhosted.org/packages/42/69/f0d13d1e43ec50d1ca85b70c27cc5333f85186668700544a7661c4d6d374/dark-matter-1.0.13.tar.gz#sha256=4b061448407711cab985c60762244028d74b32a322d7329a63138e4080d110d9 (from https://pypi.org/simple/dark-matter/), version: 1.0.13
2021-01-31T12:05:09,788   Found link https://files.pythonhosted.org/packages/30/5a/9c56b0639b13c2c78cad8ac304e9c5d834eed0cab07d0dcd780b7be47249/dark-matter-1.0.16.tar.gz#sha256=c0c11585b9a71c47aa248794779111a9ab30c48e32e17540f95347d98ce116a6 (from https://pypi.org/simple/dark-matter/), version: 1.0.16
2021-01-31T12:05:09,789   Found link https://files.pythonhosted.org/packages/26/8d/eb629def26e051253c4070e70dfc7c8258d513b2685fe4e92bb975b6e613/dark-matter-1.0.19.tar.gz#sha256=4944ba9c898e0b956b6a8c0b8e78e5aa91579ac469885c61e70d71e89f92883d (from https://pypi.org/simple/dark-matter/), version: 1.0.19
2021-01-31T12:05:09,790   Found link https://files.pythonhosted.org/packages/6d/6f/755f4b72e91ce15571d5884761d34627eba8dc173005bc8d41a2e4d2ec81/dark-matter-1.0.27.tar.gz#sha256=70b765fdc0932137cb1ee2b9183018261c218fd27c87a3f3ab5fabb93a9d0e3c (from https://pypi.org/simple/dark-matter/), version: 1.0.27
2021-01-31T12:05:09,791   Found link https://files.pythonhosted.org/packages/c1/41/a8cb27f9a68dd388473a594c0a5cb162fb1518d16197c357ec3617e9631c/dark-matter-1.0.32.tar.gz#sha256=405b6a4a51ac4c1660435c882fb548d1e6ad1a889779b3893bddf5f876732eef (from https://pypi.org/simple/dark-matter/), version: 1.0.32
2021-01-31T12:05:09,792   Found link https://files.pythonhosted.org/packages/26/f5/ea2b1d090cd00bb769d4e07cc4b697373c58dac65a52cf442a4f60a833ba/dark-matter-1.0.34.tar.gz#sha256=8fe1d83a0b0476164c5a4ca8197890e1936ed0d66a689870a71676a14f671539 (from https://pypi.org/simple/dark-matter/), version: 1.0.34
2021-01-31T12:05:09,793   Found link https://files.pythonhosted.org/packages/1d/a3/954c4ab15080556dbb33a1c2053ce9028b51cb160099978332b9252b5f93/dark-matter-1.0.36.tar.gz#sha256=9f639deedd5d4e4da0276c9a6780288c5d78e95b0c5b69d08b312ed10cc10d25 (from https://pypi.org/simple/dark-matter/), version: 1.0.36
2021-01-31T12:05:09,794   Found link https://files.pythonhosted.org/packages/fd/f7/352dcf1f8fb13001175a73acb52fff4bc20760300f87459d7e1e967823a1/dark-matter-1.0.38.tar.gz#sha256=b506f4177d9334da17c7fdd2054944851b96c3872be6d00cd5ece2de2ddc7d82 (from https://pypi.org/simple/dark-matter/), version: 1.0.38
2021-01-31T12:05:09,795   Found link https://files.pythonhosted.org/packages/17/94/5d0c424a52cc3d16793cef2a6b38a8a3542c4bda072c49d61efd18a1ec60/dark-matter-1.0.40.tar.gz#sha256=6e38036fc94ef7817c18d607b937b916ef1caafe40fe072d4748306b2e646a1f (from https://pypi.org/simple/dark-matter/), version: 1.0.40
2021-01-31T12:05:09,796   Found link https://files.pythonhosted.org/packages/4c/d7/9fa11fcb1f9923e3e980f1b493791ca3fbe6920a68a939971fb1eb333d05/dark-matter-1.0.41.tar.gz#sha256=e6e0364aa69a1fef4621e7d016839a3dffbcddff5d575ba4ee7f4af5cebd754d (from https://pypi.org/simple/dark-matter/), version: 1.0.41
2021-01-31T12:05:09,797   Found link https://files.pythonhosted.org/packages/1b/bb/9a2bffcc74c3bb8c2f45106443174a74dbe3424e45eb483ba7bf72da1fe2/dark-matter-1.0.42.tar.gz#sha256=2540312ed60fed3f5a52b5ec60409e712c8a562569baa132be6ab0c53edbec83 (from https://pypi.org/simple/dark-matter/), version: 1.0.42
2021-01-31T12:05:09,798   Found link https://files.pythonhosted.org/packages/e2/dd/cb0a17ce78d39d3b6d6dc93f54c49069b722569042312f7044143a67af30/dark-matter-1.0.43.tar.gz#sha256=17548e06b695864df72afb4e6664261333612b991373745f4e68f99ed48ace5f (from https://pypi.org/simple/dark-matter/), version: 1.0.43
2021-01-31T12:05:09,799   Found link https://files.pythonhosted.org/packages/88/ee/c6e7d4142ee1baca46ff0d7f295b7d5a4059648c815de4223f873f17a448/dark-matter-1.0.44.tar.gz#sha256=468d2be2ad00ddcdfafe52f09a6a8971b40964e816fdb95de2772d32879d3fc5 (from https://pypi.org/simple/dark-matter/), version: 1.0.44
2021-01-31T12:05:09,800   Found link https://files.pythonhosted.org/packages/7e/71/19001567a982f1ea235095e6f2042990e0666c343bfd985b2c2b8a6a6edc/dark-matter-1.0.45.tar.gz#sha256=b60e397a82b3183fae2cdee32ac92f43f4533bcb5a7683d5fc3e58dd6ceee4fd (from https://pypi.org/simple/dark-matter/), version: 1.0.45
2021-01-31T12:05:09,801   Found link https://files.pythonhosted.org/packages/9b/71/0395a4c77fc9443e4b1c8d6d3787d527c2d06ecf56c75db9779bb602d594/dark-matter-1.0.46.tar.gz#sha256=66aaa9872db60c407b047f5e997c8155fe0626df9222b251a6f65b15ca4d3423 (from https://pypi.org/simple/dark-matter/), version: 1.0.46
2021-01-31T12:05:09,801   Found link https://files.pythonhosted.org/packages/85/3b/b68351e5280d2f65b26ca3e225a5a0385d921a6d25cef62563eeaec42343/dark-matter-1.0.47.tar.gz#sha256=b51c372b06fe94fcc93f8795aa5d2b2a547108934cc5c429e89972cdea153baf (from https://pypi.org/simple/dark-matter/), version: 1.0.47
2021-01-31T12:05:09,802   Found link https://files.pythonhosted.org/packages/fb/4c/6e27c41b817fc86240a956472978b226008da91e8c2b2b5dd991091c3a2d/dark-matter-1.0.48.tar.gz#sha256=e9ca7aad5b5631658d2ab154108568faa6196f7cea8dfaef1881d0013a3c59bd (from https://pypi.org/simple/dark-matter/), version: 1.0.48
2021-01-31T12:05:09,803   Found link https://files.pythonhosted.org/packages/07/65/1253b1fcd6c75fbbc19eee09982ec62023742959583d6687c666befffb71/dark-matter-1.0.49.tar.gz#sha256=7fe2af86f08e9e2416869c8fa571fc79b5a6965d4e2e9624536984a6ede94d5e (from https://pypi.org/simple/dark-matter/), version: 1.0.49
2021-01-31T12:05:09,804   Found link https://files.pythonhosted.org/packages/ac/93/e94fa7a2455aa54ebc294bb5bd93c11aca3c461073aee1fab28b4ee380ae/dark-matter-1.0.50.tar.gz#sha256=cd9ce5690ff46e8a27b17505dc500d0dc065bb403d6aa731615fbcfa0e9ecb50 (from https://pypi.org/simple/dark-matter/), version: 1.0.50
2021-01-31T12:05:09,805   Found link https://files.pythonhosted.org/packages/b9/ce/7d74daae572ebb32ffdbd439440361f5bf39eb9f9d0f55654878cbd7cbb2/dark-matter-1.0.51.tar.gz#sha256=ca7762302eb529ec15dbc0bba35397dc018cb3b43b371b02495ba1caa8fc6fe2 (from https://pypi.org/simple/dark-matter/), version: 1.0.51
2021-01-31T12:05:09,806   Found link https://files.pythonhosted.org/packages/cd/fb/8ff473df5992d3cdfc57151ff5595561c42fff343fcc01c76f3b95cd1eb9/dark-matter-1.0.52.tar.gz#sha256=7c5cadd1c74c4c85d55ec808f2ecd1a86abf726b7f3dc4b8755a32dc81a57094 (from https://pypi.org/simple/dark-matter/), version: 1.0.52
2021-01-31T12:05:09,807   Found link https://files.pythonhosted.org/packages/d4/a7/8e4a7fc079ce3324a605902fb7fe865ab846ba3376408987680cc68703c7/dark-matter-1.0.53.tar.gz#sha256=c06386be8fc1f85e76fc6f7c6b8ea6597503a9c238e5368e0975f18ea9fe3f6a (from https://pypi.org/simple/dark-matter/), version: 1.0.53
2021-01-31T12:05:09,808   Found link https://files.pythonhosted.org/packages/a8/50/55d45de9c1903904647e651a955b56dff452d61f9e095a5004a149ab2eca/dark-matter-1.0.54.tar.gz#sha256=cb4fefda8208eb0d40c4b172c30286b4be960018e89c89aacb94f177cbd0a77a (from https://pypi.org/simple/dark-matter/), version: 1.0.54
2021-01-31T12:05:09,809   Found link https://files.pythonhosted.org/packages/47/41/cc272f599662d184f754abc67ee763ac9da02c5d9ef5d1155effe67d132f/dark-matter-1.0.55.tar.gz#sha256=d1b4537860411417b98b32252f8a363623c263464c32d994cd442de74e36d4d9 (from https://pypi.org/simple/dark-matter/), version: 1.0.55
2021-01-31T12:05:09,810   Found link https://files.pythonhosted.org/packages/d3/d8/250e7506219460c7da81f6f51bf93cce13d21b461392dcbfa1311e504a95/dark-matter-1.0.56.tar.gz#sha256=d5cbddab4a2b8cc948329f46660259c2bb30b866446ddfc12e8c6b8ddc9822ff (from https://pypi.org/simple/dark-matter/), version: 1.0.56
2021-01-31T12:05:09,811   Found link https://files.pythonhosted.org/packages/81/c7/3bf4ec17c4f0e02ca7741f7ede49d58680f12b48a4a7350031ffe8b38ba1/dark-matter-1.0.57.tar.gz#sha256=3d33c771486b56c8a4dd10fb70f91e4c0ce1d279d05cbdf6dac92cceffb35809 (from https://pypi.org/simple/dark-matter/), version: 1.0.57
2021-01-31T12:05:09,812   Found link https://files.pythonhosted.org/packages/f1/d5/6e02cb418664b484f16ea42b60a86add44acf56dda4875001528957c27b2/dark-matter-1.0.58.tar.gz#sha256=6a9e75658cacc7ae7e9926d0debd5605e15e5761452455e4f65c96b3cd947c6b (from https://pypi.org/simple/dark-matter/), version: 1.0.58
2021-01-31T12:05:09,813   Found link https://files.pythonhosted.org/packages/5a/d3/a69ed2feeac3afcb852a8bcce6cadd5b541cd78de3756f0519a62ca29371/dark-matter-1.0.59.tar.gz#sha256=1f0c71e01cce5ca62b1599c974ff24b8b211349f880c365ecbdce369c6877280 (from https://pypi.org/simple/dark-matter/), version: 1.0.59
2021-01-31T12:05:09,814   Found link https://files.pythonhosted.org/packages/68/70/96bd4a89d1c5f40e05d734be94ae1571be35c0b4c4e19e22c0be893c9e1c/dark-matter-1.0.60.tar.gz#sha256=933a4cc3f34ed03198cacedaab9cc0915402bfff0ad238a0f879c7b246243f02 (from https://pypi.org/simple/dark-matter/), version: 1.0.60
2021-01-31T12:05:09,815   Found link https://files.pythonhosted.org/packages/55/52/ab50ff5d12bb5efd1171a964a4f5baa03edb0091dfa5c79af08fbbe4da16/dark-matter-1.0.61.tar.gz#sha256=09e5bdfd05c954d34fc87541f61a416169ae53daea1a22723de915a9f50ea9e4 (from https://pypi.org/simple/dark-matter/), version: 1.0.61
2021-01-31T12:05:09,815   Found link https://files.pythonhosted.org/packages/ab/de/cc9a342e642f66e60c8ff98d1786229d5cfcfb0306158f0c19ef61059303/dark-matter-1.0.62.tar.gz#sha256=6f7347e0923abd2eb2118862a03966c5204262e5d496e11900de3aed43724265 (from https://pypi.org/simple/dark-matter/), version: 1.0.62
2021-01-31T12:05:09,816   Found link https://files.pythonhosted.org/packages/cd/a5/713b8a9f25437fafe2a34291ca34f945c9e1394c2e600f73e5abd8e3282e/dark-matter-1.0.63.tar.gz#sha256=fca60020cce6b249f61f6ae5e268dbd20f71a2d257bb668c84313ca29d6873b1 (from https://pypi.org/simple/dark-matter/), version: 1.0.63
2021-01-31T12:05:09,817   Found link https://files.pythonhosted.org/packages/77/fe/320a21e0c4c116bd28487af7156a9937a90dcc44f70c4f720267e9b14291/dark-matter-1.0.64.tar.gz#sha256=d1c1764b08f3fbdf71f46a5f9acbe0deadb96d5af5b4b99d8b19e13e4abe9e3d (from https://pypi.org/simple/dark-matter/), version: 1.0.64
2021-01-31T12:05:09,818   Found link https://files.pythonhosted.org/packages/a0/08/9be54a6570a6acf6f87d5ca8ff9f91660697fc32212d0be3601785e796b9/dark-matter-1.0.65.tar.gz#sha256=1332fafc881be70d395aa69ed174c0036941f2d4f8e170f24ba6c0fa14397de6 (from https://pypi.org/simple/dark-matter/), version: 1.0.65
2021-01-31T12:05:09,819   Found link https://files.pythonhosted.org/packages/7b/61/46caedf674111789641d78a4252b26d1ea43d3d8c77f906b3abc7c638acc/dark-matter-1.0.66.tar.gz#sha256=a0ad6f3e8afe8294c1aa5011577533334d2a6cbb16eaaa9b48a451fe0a9db293 (from https://pypi.org/simple/dark-matter/), version: 1.0.66
2021-01-31T12:05:09,820   Found link https://files.pythonhosted.org/packages/97/54/fc8129e31460a4007b2d328e37efeb55a3488b7a7a34592e0c738ac27079/dark-matter-1.0.67.tar.gz#sha256=709dbe5d0c6df732587900ea0ee3a8508fd43a37d7aff3ec5387bbee7d7917cd (from https://pypi.org/simple/dark-matter/), version: 1.0.67
2021-01-31T12:05:09,821   Found link https://files.pythonhosted.org/packages/e5/33/890848c35cb392c57712943c79ffe317ce401bd2db2a616637719f8c5522/dark-matter-1.0.68.tar.gz#sha256=5426893dee726d1f3da0d38176f4489d983e698b36586b2a5d4030ccfd38ae9f (from https://pypi.org/simple/dark-matter/), version: 1.0.68
2021-01-31T12:05:09,822   Found link https://files.pythonhosted.org/packages/c2/23/5e4253583920bada6ee2f5204fbaf8a745527f8ba5c585ac8891fa959991/dark-matter-1.0.69.tar.gz#sha256=494ab515566d76d337f7b25186921029e01e84460ae1f2d81c355a9ae135a18c (from https://pypi.org/simple/dark-matter/), version: 1.0.69
2021-01-31T12:05:09,823   Found link https://files.pythonhosted.org/packages/3d/6a/1cf82dcc5f77ac300a3ee4c1fce72edad81280795e42f0da80b67b3a1838/dark-matter-1.0.70.tar.gz#sha256=f74facc816c78353ee9cdeeac334e9e03d05c38cc381588def6443125fe7ff17 (from https://pypi.org/simple/dark-matter/), version: 1.0.70
2021-01-31T12:05:09,824   Found link https://files.pythonhosted.org/packages/64/9a/ace6de00719320e68408c58f3abe036645a29901f17e3e1cd356260cb9f5/dark-matter-1.0.71.tar.gz#sha256=f0ed0a32bf00786a18d3b50596ad79ec24f01ed3fa9d56f36efec9db58a750a6 (from https://pypi.org/simple/dark-matter/), version: 1.0.71
2021-01-31T12:05:09,825   Found link https://files.pythonhosted.org/packages/94/d0/a1e5aabab8ad66683757b3b0569d672da3528a5a8619f830f33c2d6bb179/dark-matter-1.0.72.tar.gz#sha256=3cab3d9241f6fccf0e1a88ed3f572b90bd296c41810b85b49054ba4238742061 (from https://pypi.org/simple/dark-matter/), version: 1.0.72
2021-01-31T12:05:09,826   Found link https://files.pythonhosted.org/packages/a2/1a/f7d17f7e7d196b1fb5382a27adc6ae61bbc4c47ad812c9e78de890b61743/dark-matter-1.0.73.tar.gz#sha256=ef4359ea0a02e00b3f1b06754da34fb6cfbe030ecd3976dac50841c0ae46c062 (from https://pypi.org/simple/dark-matter/), version: 1.0.73
2021-01-31T12:05:09,827   Found link https://files.pythonhosted.org/packages/8e/dc/f8fbeb00d964a029f3e444ed65ba9ca0f69e83c4b19d93efb858ac9d67cf/dark-matter-1.0.74.tar.gz#sha256=90c2fc0dcc27bbd558041ae982768c630c602360754f3e07577c2711966c1fb7 (from https://pypi.org/simple/dark-matter/), version: 1.0.74
2021-01-31T12:05:09,827   Found link https://files.pythonhosted.org/packages/26/50/60d51f6d26ec912a10cd058c4221c4794813080bcccd2f5af993a2bfe973/dark-matter-1.0.75.tar.gz#sha256=9db8994744be84b8d67035bff720b4b8330e8682339d3bef01a857210d400c50 (from https://pypi.org/simple/dark-matter/), version: 1.0.75
2021-01-31T12:05:09,828   Found link https://files.pythonhosted.org/packages/03/bb/45b48f894b2b3f2a08e9e3c3c07ce133db94e91a363688f3ab9ce4969d80/dark-matter-1.0.76.tar.gz#sha256=940772c257a0f785f0f5efa53a7075692b5fa889a6c1d3432e17929fc30a1179 (from https://pypi.org/simple/dark-matter/), version: 1.0.76
2021-01-31T12:05:09,829   Found link https://files.pythonhosted.org/packages/5a/b2/63dea9b0ab7517190dd58b390cd9f0c007da74ad33c1ce37a74e6640e62c/dark-matter-1.0.77.tar.gz#sha256=e027b5a28158d9e74d712bdc4651580fe3c14be15a124a7a7634523e2cafd842 (from https://pypi.org/simple/dark-matter/), version: 1.0.77
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2021-01-31T12:05:09,995   Found link https://files.pythonhosted.org/packages/bd/b4/10e032af240744121443ac88366f52e57573aaf549173aa8a42fa094518b/dark-matter-3.1.54.tar.gz#sha256=62a62a8791f3e7b485c27f2963de4fab36a83893001f4c3de873a13a7161d3cb (from https://pypi.org/simple/dark-matter/), version: 3.1.54
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2021-01-31T12:05:09,997   Found link https://files.pythonhosted.org/packages/8a/69/d8c027b1941f7d309feed03a20f5d1df81bbea0abff5113fa300688f89f9/dark-matter-3.1.56.tar.gz#sha256=434da8c4aa08cb37519020b2cef148332e17964be7dc1c54dbbfae0a32cb01d9 (from https://pypi.org/simple/dark-matter/), version: 3.1.56
2021-01-31T12:05:09,998   Found link https://files.pythonhosted.org/packages/e4/41/11a054746343bf60324436f2d3cc80176b4ff1dfca5408a5167f1b4d07f4/dark-matter-3.1.57.tar.gz#sha256=1a8b9d7961616bef7c9bb4d631092105f00d65809cb01cfedbf5cdeac44f18ae (from https://pypi.org/simple/dark-matter/), version: 3.1.57
2021-01-31T12:05:09,999   Found link https://files.pythonhosted.org/packages/44/b2/3a5f7cc9c565b0b62033c889d677ac78943d71681a0a5b1ab86aa097b78e/dark-matter-3.1.58.tar.gz#sha256=9ea418fa491da09c651ba4d65794a49d543419f82ffb4f8e435d79d17632d2c1 (from https://pypi.org/simple/dark-matter/), version: 3.1.58
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2021-01-31T12:05:10,002   Found link https://files.pythonhosted.org/packages/f0/bf/0dfcf9b9f944d9ce8df66f477901cafb3e353e87a71c3557a4d5cc062a55/dark-matter-3.1.61.tar.gz#sha256=9ccde70d55378b876f770876fa9e6ddb9b44156c20b841a689306102f715049f (from https://pypi.org/simple/dark-matter/), version: 3.1.61
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2021-01-31T12:05:10,004   Found link https://files.pythonhosted.org/packages/a5/af/109ab833bc5753cf18312437bcea64ecf7b6cbda17aed3991f448b41b6f0/dark-matter-3.1.63.tar.gz#sha256=aefd913f742ec8b569fb72f31e8848c28ac54685c1b0154b78cbe4fa7793a7a4 (from https://pypi.org/simple/dark-matter/), version: 3.1.63
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2021-01-31T12:05:10,009   Found link https://files.pythonhosted.org/packages/f8/1a/0eb7a2cf9bb2efb48a2451ed57e6bfe8dbd19b7d2d3474dcb920312f139a/dark-matter-3.1.68.tar.gz#sha256=a1f803b98728001806f4996a4e252d1e4769985e78f633057661419ece5194f8 (from https://pypi.org/simple/dark-matter/), version: 3.1.68
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2021-01-31T12:05:10,011   Found link https://files.pythonhosted.org/packages/3e/5e/97a1ce92fc47c9169994d116768eada55c43373e357ca008e74e5a1dc142/dark-matter-3.1.71.tar.gz#sha256=dd7faaf60baca13b53d74dd57d9b0a6d7cd9c478f69b2a93a499b12aa19bb673 (from https://pypi.org/simple/dark-matter/), version: 3.1.71
2021-01-31T12:05:10,012   Found link https://files.pythonhosted.org/packages/82/97/c5290cbc394d056b863492e5a9d8baee17e76a5791974dabeb60dd1aaa9d/dark-matter-3.1.72.tar.gz#sha256=8fd2416dc876d419706f63f60cff92ce10c5d579a45bbb28c1a691a147c9387d (from https://pypi.org/simple/dark-matter/), version: 3.1.72
2021-01-31T12:05:10,013   Found link https://files.pythonhosted.org/packages/e3/99/4ede5f73adb9a626398f1c60828357875bb15ce6a089f1f5d7cccdc23727/dark-matter-3.1.73.tar.gz#sha256=91427c52968f8db1c8ad6985ad39286155f6f1918e6d4c330942655ef61e3905 (from https://pypi.org/simple/dark-matter/), version: 3.1.73
2021-01-31T12:05:10,014   Found link https://files.pythonhosted.org/packages/63/f5/c113abaa137fabb548cbce7de51585a391ccbef68fdb50bac8b113c7881e/dark-matter-3.1.74.tar.gz#sha256=68d96ddda46298d92677dd83f4be92cf0f4d7bff45017ec362d4a7b954281bc0 (from https://pypi.org/simple/dark-matter/), version: 3.1.74
2021-01-31T12:05:10,015   Found link https://files.pythonhosted.org/packages/98/08/0cb8bda914063ba75079777c29571d3ef387047b097842dd5ed1790422d6/dark-matter-3.1.75.tar.gz#sha256=d69aa004b92d0683e421274f18add6a26e0d0c864c56c078bc7c6e67ca827f77 (from https://pypi.org/simple/dark-matter/), version: 3.1.75
2021-01-31T12:05:10,016   Found link https://files.pythonhosted.org/packages/cb/7f/75d266c4266f1b9179b22bb1edb7d38f5a6083b094c5e6fc53ef6c8a2995/dark-matter-3.1.76.tar.gz#sha256=a0bb511247a7ec82ceb8cf8eabfa045aa569e75d9f59def183f0c6158bdd7f17 (from https://pypi.org/simple/dark-matter/), version: 3.1.76
2021-01-31T12:05:10,017   Found link https://files.pythonhosted.org/packages/b2/c0/c5db9094660aae28d21252b24d6d21619149da37833da5164f407c9ea128/dark-matter-3.1.79.tar.gz#sha256=cc14e1021624cb50886b2e5b70b94259e004c975f0480ff35d9a3381e352f07e (from https://pypi.org/simple/dark-matter/), version: 3.1.79
2021-01-31T12:05:10,018   Found link https://files.pythonhosted.org/packages/bb/91/b9cb62df81f871bb56fb78d6038753845d4d4e90d1737ae6f410160ff31f/dark-matter-3.1.81.tar.gz#sha256=3d20c804033e2c2a2e453bb96b58fcde16e8ddca3057696e77330aa6e8df00d5 (from https://pypi.org/simple/dark-matter/), version: 3.1.81
2021-01-31T12:05:10,019   Found link https://files.pythonhosted.org/packages/fc/7c/182ac5794f96f41e378916d74a2f61883be0fc04f51e9fc88856cf55ff99/dark-matter-3.1.82.tar.gz#sha256=ab9cdf88400e98a49d5233b4deac87c60d1394f1a66bb1d770e24a7542b061dd (from https://pypi.org/simple/dark-matter/), version: 3.1.82
2021-01-31T12:05:10,020   Found link https://files.pythonhosted.org/packages/d1/29/20a1d35035fece08efda70f18f4fea4913d179edd497a811516589b6f6c0/dark-matter-3.1.84.tar.gz#sha256=8202263762607e3312781054ed326f82c0b8348bae1b9b803f21b07ea1ce15fd (from https://pypi.org/simple/dark-matter/), version: 3.1.84
2021-01-31T12:05:10,021   Found link https://files.pythonhosted.org/packages/13/d4/262226886768170d06cdc7b41b143e9151aaf6651725b48a949f9920305f/dark-matter-3.1.85.tar.gz#sha256=ef2ba3420eec01ff6aa91d30ac7a7e19e3abc53b270fb66c060540b4fbdb703a (from https://pypi.org/simple/dark-matter/), version: 3.1.85
2021-01-31T12:05:10,022   Found link https://files.pythonhosted.org/packages/b1/83/5f937593c1325857d5820729d1571331c1384af1b2c750848f0ddf25f32c/dark-matter-3.1.86.tar.gz#sha256=0c94c6ee0b76e1aa9e2d2820ba54ae865cd72fc99d32c89ac0cffb85b66dee90 (from https://pypi.org/simple/dark-matter/), version: 3.1.86
2021-01-31T12:05:10,172 Given no hashes to check 1 links for project 'dark-matter': discarding no candidates
2021-01-31T12:05:10,211 Collecting dark-matter==3.1.86
2021-01-31T12:05:10,214   Created temporary directory: /tmp/pip-unpack-y7xlumqe
2021-01-31T12:05:10,459   Downloading dark-matter-3.1.86.tar.gz (331 kB)
2021-01-31T12:05:17,239   Added dark-matter==3.1.86 from https://files.pythonhosted.org/packages/b1/83/5f937593c1325857d5820729d1571331c1384af1b2c750848f0ddf25f32c/dark-matter-3.1.86.tar.gz#sha256=0c94c6ee0b76e1aa9e2d2820ba54ae865cd72fc99d32c89ac0cffb85b66dee90 to build tracker '/tmp/pip-req-tracker-eyqjpb3n'
2021-01-31T12:05:17,243     Running setup.py (path:/tmp/pip-wheel-5msb7m0e/dark-matter_3431990726764c0289f51e7277be6164/setup.py) egg_info for package dark-matter
2021-01-31T12:05:17,245     Created temporary directory: /tmp/pip-pip-egg-info-xap4jiog
2021-01-31T12:05:17,245     Running command python setup.py egg_info
2021-01-31T12:05:19,555     running egg_info
2021-01-31T12:05:19,561     creating /tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info
2021-01-31T12:05:19,564     writing top-level names to /tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info/top_level.txt
2021-01-31T12:05:19,568     writing dependency_links to /tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info/dependency_links.txt
2021-01-31T12:05:19,570     writing /tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info/PKG-INFO
2021-01-31T12:05:19,575     writing requirements to /tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info/requires.txt
2021-01-31T12:05:19,579     writing manifest file '/tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info/SOURCES.txt'
2021-01-31T12:05:20,017     reading manifest file '/tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info/SOURCES.txt'
2021-01-31T12:05:20,051     writing manifest file '/tmp/pip-pip-egg-info-xap4jiog/dark_matter.egg-info/SOURCES.txt'
2021-01-31T12:05:20,188   Source in /tmp/pip-wheel-5msb7m0e/dark-matter_3431990726764c0289f51e7277be6164 has version 3.1.86, which satisfies requirement dark-matter==3.1.86 from https://files.pythonhosted.org/packages/b1/83/5f937593c1325857d5820729d1571331c1384af1b2c750848f0ddf25f32c/dark-matter-3.1.86.tar.gz#sha256=0c94c6ee0b76e1aa9e2d2820ba54ae865cd72fc99d32c89ac0cffb85b66dee90
2021-01-31T12:05:20,190   Removed dark-matter==3.1.86 from https://files.pythonhosted.org/packages/b1/83/5f937593c1325857d5820729d1571331c1384af1b2c750848f0ddf25f32c/dark-matter-3.1.86.tar.gz#sha256=0c94c6ee0b76e1aa9e2d2820ba54ae865cd72fc99d32c89ac0cffb85b66dee90 from build tracker '/tmp/pip-req-tracker-eyqjpb3n'
2021-01-31T12:05:20,198 Created temporary directory: /tmp/pip-unpack-agmka7jf
2021-01-31T12:05:20,199 Building wheels for collected packages: dark-matter
2021-01-31T12:05:20,208   Created temporary directory: /tmp/pip-wheel-t4k48swr
2021-01-31T12:05:20,209   Building wheel for dark-matter (setup.py): started
2021-01-31T12:05:20,209   Destination directory: /tmp/pip-wheel-t4k48swr
2021-01-31T12:05:20,210   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-5msb7m0e/dark-matter_3431990726764c0289f51e7277be6164/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-5msb7m0e/dark-matter_3431990726764c0289f51e7277be6164/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-t4k48swr
2021-01-31T12:05:22,523   running bdist_wheel
2021-01-31T12:05:22,538   running build
2021-01-31T12:05:22,539   running build_py
2021-01-31T12:05:22,885   creating build
2021-01-31T12:05:22,886   creating build/lib
2021-01-31T12:05:22,888   creating build/lib/dark
2021-01-31T12:05:22,891   copying dark/cigar.py -> build/lib/dark
2021-01-31T12:05:22,895   copying dark/colors.py -> build/lib/dark
2021-01-31T12:05:22,899   copying dark/database.py -> build/lib/dark
2021-01-31T12:05:22,903   copying dark/summarize.py -> build/lib/dark
2021-01-31T12:05:22,908   copying dark/entrez.py -> build/lib/dark
2021-01-31T12:05:22,912   copying dark/mutations.py -> build/lib/dark
2021-01-31T12:05:22,919   copying dark/sam.py -> build/lib/dark
2021-01-31T12:05:22,929   copying dark/fastq.py -> build/lib/dark
2021-01-31T12:05:22,934   copying dark/errors.py -> build/lib/dark
2021-01-31T12:05:22,937   copying dark/titles.py -> build/lib/dark
2021-01-31T12:05:22,944   copying dark/sequence.py -> build/lib/dark
2021-01-31T12:05:22,948   copying dark/features.py -> build/lib/dark
2021-01-31T12:05:22,954   copying dark/fasta.py -> build/lib/dark
2021-01-31T12:05:22,961   copying dark/dna.py -> build/lib/dark
2021-01-31T12:05:22,969   copying dark/simplify.py -> build/lib/dark
2021-01-31T12:05:22,974   copying dark/consensus.py -> build/lib/dark
2021-01-31T12:05:22,979   copying dark/btop.py -> build/lib/dark
2021-01-31T12:05:22,983   copying dark/ipynb.py -> build/lib/dark
2021-01-31T12:05:22,987   copying dark/intervals.py -> build/lib/dark
2021-01-31T12:05:22,992   copying dark/html.py -> build/lib/dark
2021-01-31T12:05:22,999   copying dark/aligners.py -> build/lib/dark
2021-01-31T12:05:23,004   copying dark/utils.py -> build/lib/dark
2021-01-31T12:05:23,011   copying dark/aa.py -> build/lib/dark
2021-01-31T12:05:23,019   copying dark/fasta_ss.py -> build/lib/dark
2021-01-31T12:05:23,024   copying dark/distance.py -> build/lib/dark
2021-01-31T12:05:23,028   copying dark/graphics.py -> build/lib/dark
2021-01-31T12:05:23,037   copying dark/process.py -> build/lib/dark
2021-01-31T12:05:23,043   copying dark/analyze_reads.py -> build/lib/dark
2021-01-31T12:05:23,048   copying dark/proteins.py -> build/lib/dark
2021-01-31T12:05:23,058   copying dark/score.py -> build/lib/dark
2021-01-31T12:05:23,061   copying dark/fpcache.py -> build/lib/dark
2021-01-31T12:05:23,065   copying dark/dimension.py -> build/lib/dark
2021-01-31T12:05:23,069   copying dark/reads.py -> build/lib/dark
2021-01-31T12:05:23,081   copying dark/codonDistance.py -> build/lib/dark
2021-01-31T12:05:23,086   copying dark/taxonomy.py -> build/lib/dark
2021-01-31T12:05:23,094   copying dark/bowtie2.py -> build/lib/dark
2021-01-31T12:05:23,100   copying dark/genbank.py -> build/lib/dark
2021-01-31T12:05:23,105   copying dark/__init__.py -> build/lib/dark
2021-01-31T12:05:23,108   copying dark/ncbidb.py -> build/lib/dark
2021-01-31T12:05:23,112   copying dark/genomes.py -> build/lib/dark
2021-01-31T12:05:23,119   copying dark/local_align.py -> build/lib/dark
2021-01-31T12:05:23,127   copying dark/filter.py -> build/lib/dark
2021-01-31T12:05:23,134   copying dark/baseimage.py -> build/lib/dark
2021-01-31T12:05:23,138   copying dark/hsp.py -> build/lib/dark
2021-01-31T12:05:23,143   copying dark/orfs.py -> build/lib/dark
2021-01-31T12:05:23,147   copying dark/alignments.py -> build/lib/dark
2021-01-31T12:05:23,154   creating build/lib/dark/blast
2021-01-31T12:05:23,156   copying dark/blast/records.py -> build/lib/dark/blast
2021-01-31T12:05:23,160   copying dark/blast/hacks.py -> build/lib/dark/blast
2021-01-31T12:05:23,165   copying dark/blast/params.py -> build/lib/dark/blast
2021-01-31T12:05:23,169   copying dark/blast/score.py -> build/lib/dark/blast
2021-01-31T12:05:23,173   copying dark/blast/__init__.py -> build/lib/dark/blast
2021-01-31T12:05:23,177   copying dark/blast/hsp.py -> build/lib/dark/blast
2021-01-31T12:05:23,184   copying dark/blast/conversion.py -> build/lib/dark/blast
2021-01-31T12:05:23,191   copying dark/blast/alignments.py -> build/lib/dark/blast
2021-01-31T12:05:23,199   creating build/lib/dark/diamond
2021-01-31T12:05:23,201   copying dark/diamond/sam.py -> build/lib/dark/diamond
2021-01-31T12:05:23,207   copying dark/diamond/run.py -> build/lib/dark/diamond
2021-01-31T12:05:23,211   copying dark/diamond/__init__.py -> build/lib/dark/diamond
2021-01-31T12:05:23,214   copying dark/diamond/hsp.py -> build/lib/dark/diamond
2021-01-31T12:05:23,219   copying dark/diamond/conversion.py -> build/lib/dark/diamond
2021-01-31T12:05:23,225   copying dark/diamond/alignments.py -> build/lib/dark/diamond
2021-01-31T12:05:23,232   creating build/lib/dark/civ
2021-01-31T12:05:23,234   copying dark/civ/html.py -> build/lib/dark/civ
2021-01-31T12:05:23,241   copying dark/civ/graphics.py -> build/lib/dark/civ
2021-01-31T12:05:23,249   copying dark/civ/proteins.py -> build/lib/dark/civ
2021-01-31T12:05:23,264   copying dark/civ/__init__.py -> build/lib/dark/civ
2021-01-31T12:05:23,279   running build_scripts
2021-01-31T12:05:23,280   creating build/scripts-3.5
2021-01-31T12:05:23,283   copying and adjusting bin/aa-info.py -> build/scripts-3.5
2021-01-31T12:05:23,287   copying and adjusting bin/aa-to-dna.py -> build/scripts-3.5
2021-01-31T12:05:23,290   copying and adjusting bin/aa-to-properties.py -> build/scripts-3.5
2021-01-31T12:05:23,294   copying and adjusting bin/adaptor-distances.py -> build/scripts-3.5
2021-01-31T12:05:23,297   copying and adjusting bin/alignment-panel-civ.py -> build/scripts-3.5
2021-01-31T12:05:23,304   copying and adjusting bin/alignments-per-read.py -> build/scripts-3.5
2021-01-31T12:05:23,307   copying and adjusting bin/bit-score-to-e-value.py -> build/scripts-3.5
2021-01-31T12:05:23,310   copying and adjusting bin/cat-json-blast-records.py -> build/scripts-3.5
2021-01-31T12:05:23,314   copying and adjusting bin/check-fasta-json-blast-consistency.py -> build/scripts-3.5
2021-01-31T12:05:23,318   copying and adjusting bin/codon-distance.py -> build/scripts-3.5
2021-01-31T12:05:23,322   copying and adjusting bin/compare-consensuses.py -> build/scripts-3.5
2021-01-31T12:05:23,329   copying and adjusting bin/compare-sequences.py -> build/scripts-3.5
2021-01-31T12:05:23,336   copying and adjusting bin/convert-blast-xml-to-json.py -> build/scripts-3.5
2021-01-31T12:05:23,340   copying and adjusting bin/convert-diamond-to-json.py -> build/scripts-3.5
2021-01-31T12:05:23,343   copying and adjusting bin/convert-diamond-to-sam.py -> build/scripts-3.5
2021-01-31T12:05:23,348   copying bin/convert-sam-to-fastq.sh -> build/scripts-3.5
2021-01-31T12:05:23,353   copying and adjusting bin/create-newick-relabeling-output.py -> build/scripts-3.5
2021-01-31T12:05:23,357   copying and adjusting bin/dark-matter-version.py -> build/scripts-3.5
2021-01-31T12:05:23,361   copying and adjusting bin/describe-protein-database.py -> build/scripts-3.5
2021-01-31T12:05:23,365   copying and adjusting bin/dna-to-aa.py -> build/scripts-3.5
2021-01-31T12:05:23,370   copying bin/download-genbank.sh -> build/scripts-3.5
2021-01-31T12:05:23,378   copying and adjusting bin/e-value-to-bit-score.py -> build/scripts-3.5
2021-01-31T12:05:23,382   copying and adjusting bin/extract-ORFs.py -> build/scripts-3.5
2021-01-31T12:05:23,386   copying and adjusting bin/fasta-base-indices.py -> build/scripts-3.5
2021-01-31T12:05:23,390   copying and adjusting bin/fasta-count.py -> build/scripts-3.5
2021-01-31T12:05:23,393   copying bin/fasta-diff.sh -> build/scripts-3.5
2021-01-31T12:05:23,399   copying and adjusting bin/fasta-identity-table.py -> build/scripts-3.5
2021-01-31T12:05:23,409   copying and adjusting bin/fasta-ids.py -> build/scripts-3.5
2021-01-31T12:05:23,413   copying and adjusting bin/fasta-join.py -> build/scripts-3.5
2021-01-31T12:05:23,418   copying and adjusting bin/fasta-lengths.py -> build/scripts-3.5
2021-01-31T12:05:23,421   copying and adjusting bin/fasta-sequences.py -> build/scripts-3.5
2021-01-31T12:05:23,425   copying and adjusting bin/fasta-sort.py -> build/scripts-3.5
2021-01-31T12:05:23,428   copying and adjusting bin/fasta-split-by-id.py -> build/scripts-3.5
2021-01-31T12:05:23,432   copying and adjusting bin/fasta-subset.py -> build/scripts-3.5
2021-01-31T12:05:23,436   copying and adjusting bin/fasta-subtraction.py -> build/scripts-3.5
2021-01-31T12:05:23,440   copying and adjusting bin/fasta-to-phylip.py -> build/scripts-3.5
2021-01-31T12:05:23,445   copying and adjusting bin/fasta-variable-sites.py -> build/scripts-3.5
2021-01-31T12:05:23,451   copying and adjusting bin/filter-fasta-by-complexity.py -> build/scripts-3.5
2021-01-31T12:05:23,456   copying and adjusting bin/filter-fasta-by-taxonomy.py -> build/scripts-3.5
2021-01-31T12:05:23,462   copying and adjusting bin/filter-fasta.py -> build/scripts-3.5
2021-01-31T12:05:23,465   copying and adjusting bin/filter-hits-to-fasta.py -> build/scripts-3.5
2021-01-31T12:05:23,470   copying and adjusting bin/filter-reads-alignments.py -> build/scripts-3.5
2021-01-31T12:05:23,475   copying and adjusting bin/filter-sam.py -> build/scripts-3.5
2021-01-31T12:05:23,479   copying and adjusting bin/find-hits.py -> build/scripts-3.5
2021-01-31T12:05:23,484   copying and adjusting bin/format-fasta.py -> build/scripts-3.5
2021-01-31T12:05:23,489   copying and adjusting bin/genome-protein-summary.py -> build/scripts-3.5
2021-01-31T12:05:23,495   copying and adjusting bin/get-features.py -> build/scripts-3.5
2021-01-31T12:05:23,500   copying and adjusting bin/get-hosts.py -> build/scripts-3.5
2021-01-31T12:05:23,504   copying and adjusting bin/get-reads.py -> build/scripts-3.5
2021-01-31T12:05:23,508   copying and adjusting bin/get-taxonomy.py -> build/scripts-3.5
2021-01-31T12:05:23,512   copying and adjusting bin/graph-evalues.py -> build/scripts-3.5
2021-01-31T12:05:23,515   copying and adjusting bin/local-align.py -> build/scripts-3.5
2021-01-31T12:05:23,518   copying and adjusting bin/make-consensus.py -> build/scripts-3.5
2021-01-31T12:05:23,524   copying and adjusting bin/make-fasta-database.py -> build/scripts-3.5
2021-01-31T12:05:23,528   copying and adjusting bin/make-protein-database.py -> build/scripts-3.5
2021-01-31T12:05:23,535   copying and adjusting bin/ncbi-fetch-id.py -> build/scripts-3.5
2021-01-31T12:05:23,539   copying and adjusting bin/newick-to-ascii.py -> build/scripts-3.5
2021-01-31T12:05:23,543   copying and adjusting bin/noninteractive-alignment-panel.py -> build/scripts-3.5
2021-01-31T12:05:23,550   copying and adjusting bin/parse-genbank-flat-file.py -> build/scripts-3.5
2021-01-31T12:05:23,553   copying and adjusting bin/position-summary.py -> build/scripts-3.5
2021-01-31T12:05:23,557   copying bin/pre-commit.sh -> build/scripts-3.5
2021-01-31T12:05:23,562   copying and adjusting bin/print-blast-xml-for-derek.py -> build/scripts-3.5
2021-01-31T12:05:23,567   copying and adjusting bin/print-blast-xml.py -> build/scripts-3.5
2021-01-31T12:05:23,571   copying and adjusting bin/print-read-lengths.py -> build/scripts-3.5
2021-01-31T12:05:23,575   copying and adjusting bin/proteins-to-pathogens.py -> build/scripts-3.5
2021-01-31T12:05:23,582   copying and adjusting bin/proteins-to-pathogens-civ.py -> build/scripts-3.5
2021-01-31T12:05:23,588   copying and adjusting bin/randomize-fasta.py -> build/scripts-3.5
2021-01-31T12:05:23,591   copying and adjusting bin/read-blast-json.py -> build/scripts-3.5
2021-01-31T12:05:23,600   copying and adjusting bin/read-blast-xml.py -> build/scripts-3.5
2021-01-31T12:05:23,604   copying and adjusting bin/relabel-newick-tree.py -> build/scripts-3.5
2021-01-31T12:05:23,609   copying and adjusting bin/run-bwa.py -> build/scripts-3.5
2021-01-31T12:05:23,614   copying and adjusting bin/run-bowtie2.py -> build/scripts-3.5
2021-01-31T12:05:23,622   copying and adjusting bin/sam-coverage.py -> build/scripts-3.5
2021-01-31T12:05:23,626   copying and adjusting bin/sam-coverage-depth.py -> build/scripts-3.5
2021-01-31T12:05:23,630   copying and adjusting bin/sam-to-fasta-alignment.py -> build/scripts-3.5
2021-01-31T12:05:23,634   copying and adjusting bin/sam-reference-read-counts.py -> build/scripts-3.5
2021-01-31T12:05:23,637   copying and adjusting bin/sam-references.py -> build/scripts-3.5
2021-01-31T12:05:23,641   copying and adjusting bin/sff-to-fastq.py -> build/scripts-3.5
2021-01-31T12:05:23,644   copying and adjusting bin/split-fasta-by-adaptors.py -> build/scripts-3.5
2021-01-31T12:05:23,650   copying and adjusting bin/subset-protein-database.py -> build/scripts-3.5
2021-01-31T12:05:23,655   copying and adjusting bin/summarize-fasta-bases.py -> build/scripts-3.5
2021-01-31T12:05:23,660   copying and adjusting bin/summarize-reads.py -> build/scripts-3.5
2021-01-31T12:05:23,664   copying and adjusting bin/translate.py -> build/scripts-3.5
2021-01-31T12:05:23,667   copying and adjusting bin/trim-primers.py -> build/scripts-3.5
2021-01-31T12:05:23,671   copying and adjusting bin/trim-reads.py -> build/scripts-3.5
2021-01-31T12:05:23,674   copying and adjusting bin/write-htcondor-job-spec.py -> build/scripts-3.5
2021-01-31T12:05:23,677   changing mode of build/scripts-3.5/aa-info.py from 644 to 755
2021-01-31T12:05:23,678   changing mode of build/scripts-3.5/aa-to-dna.py from 644 to 755
2021-01-31T12:05:23,679   changing mode of build/scripts-3.5/aa-to-properties.py from 644 to 755
2021-01-31T12:05:23,679   changing mode of build/scripts-3.5/adaptor-distances.py from 644 to 755
2021-01-31T12:05:23,680   changing mode of build/scripts-3.5/alignment-panel-civ.py from 644 to 755
2021-01-31T12:05:23,681   changing mode of build/scripts-3.5/alignments-per-read.py from 644 to 755
2021-01-31T12:05:23,682   changing mode of build/scripts-3.5/bit-score-to-e-value.py from 644 to 755
2021-01-31T12:05:23,682   changing mode of build/scripts-3.5/cat-json-blast-records.py from 644 to 755
2021-01-31T12:05:23,683   changing mode of build/scripts-3.5/check-fasta-json-blast-consistency.py from 644 to 755
2021-01-31T12:05:23,684   changing mode of build/scripts-3.5/codon-distance.py from 644 to 755
2021-01-31T12:05:23,685   changing mode of build/scripts-3.5/compare-consensuses.py from 644 to 755
2021-01-31T12:05:23,686   changing mode of build/scripts-3.5/compare-sequences.py from 644 to 755
2021-01-31T12:05:23,687   changing mode of build/scripts-3.5/convert-blast-xml-to-json.py from 644 to 755
2021-01-31T12:05:23,688   changing mode of build/scripts-3.5/convert-diamond-to-json.py from 644 to 755
2021-01-31T12:05:23,690   changing mode of build/scripts-3.5/convert-diamond-to-sam.py from 644 to 755
2021-01-31T12:05:23,691   changing mode of build/scripts-3.5/create-newick-relabeling-output.py from 644 to 755
2021-01-31T12:05:23,692   changing mode of build/scripts-3.5/dark-matter-version.py from 644 to 755
2021-01-31T12:05:23,693   changing mode of build/scripts-3.5/describe-protein-database.py from 644 to 755
2021-01-31T12:05:23,694   changing mode of build/scripts-3.5/dna-to-aa.py from 644 to 755
2021-01-31T12:05:23,695   changing mode of build/scripts-3.5/e-value-to-bit-score.py from 644 to 755
2021-01-31T12:05:23,697   changing mode of build/scripts-3.5/extract-ORFs.py from 644 to 755
2021-01-31T12:05:23,698   changing mode of build/scripts-3.5/fasta-base-indices.py from 644 to 755
2021-01-31T12:05:23,699   changing mode of build/scripts-3.5/fasta-count.py from 644 to 755
2021-01-31T12:05:23,700   changing mode of build/scripts-3.5/fasta-identity-table.py from 644 to 755
2021-01-31T12:05:23,701   changing mode of build/scripts-3.5/fasta-ids.py from 644 to 755
2021-01-31T12:05:23,702   changing mode of build/scripts-3.5/fasta-join.py from 644 to 755
2021-01-31T12:05:23,703   changing mode of build/scripts-3.5/fasta-lengths.py from 644 to 755
2021-01-31T12:05:23,705   changing mode of build/scripts-3.5/fasta-sequences.py from 644 to 755
2021-01-31T12:05:23,705   changing mode of build/scripts-3.5/fasta-sort.py from 644 to 755
2021-01-31T12:05:23,706   changing mode of build/scripts-3.5/fasta-split-by-id.py from 644 to 755
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2021-01-31T12:05:23,710   changing mode of build/scripts-3.5/filter-fasta-by-taxonomy.py from 644 to 755
2021-01-31T12:05:23,710   changing mode of build/scripts-3.5/filter-fasta.py from 644 to 755
2021-01-31T12:05:23,711   changing mode of build/scripts-3.5/filter-hits-to-fasta.py from 644 to 755
2021-01-31T12:05:23,712   changing mode of build/scripts-3.5/filter-reads-alignments.py from 644 to 755
2021-01-31T12:05:23,712   changing mode of build/scripts-3.5/filter-sam.py from 644 to 755
2021-01-31T12:05:23,713   changing mode of build/scripts-3.5/find-hits.py from 644 to 755
2021-01-31T12:05:23,714   changing mode of build/scripts-3.5/format-fasta.py from 644 to 755
2021-01-31T12:05:23,714   changing mode of build/scripts-3.5/genome-protein-summary.py from 644 to 755
2021-01-31T12:05:23,715   changing mode of build/scripts-3.5/get-features.py from 644 to 755
2021-01-31T12:05:23,716   changing mode of build/scripts-3.5/get-hosts.py from 644 to 755
2021-01-31T12:05:23,716   changing mode of build/scripts-3.5/get-reads.py from 644 to 755
2021-01-31T12:05:23,717   changing mode of build/scripts-3.5/get-taxonomy.py from 644 to 755
2021-01-31T12:05:23,717   changing mode of build/scripts-3.5/graph-evalues.py from 644 to 755
2021-01-31T12:05:23,718   changing mode of build/scripts-3.5/local-align.py from 644 to 755
2021-01-31T12:05:23,719   changing mode of build/scripts-3.5/make-consensus.py from 644 to 755
2021-01-31T12:05:23,719   changing mode of build/scripts-3.5/make-fasta-database.py from 644 to 755
2021-01-31T12:05:23,720   changing mode of build/scripts-3.5/make-protein-database.py from 644 to 755
2021-01-31T12:05:23,721   changing mode of build/scripts-3.5/ncbi-fetch-id.py from 644 to 755
2021-01-31T12:05:23,721   changing mode of build/scripts-3.5/newick-to-ascii.py from 644 to 755
2021-01-31T12:05:23,722   changing mode of build/scripts-3.5/noninteractive-alignment-panel.py from 644 to 755
2021-01-31T12:05:23,723   changing mode of build/scripts-3.5/parse-genbank-flat-file.py from 644 to 755
2021-01-31T12:05:23,723   changing mode of build/scripts-3.5/position-summary.py from 644 to 755
2021-01-31T12:05:23,724   changing mode of build/scripts-3.5/print-blast-xml-for-derek.py from 644 to 755
2021-01-31T12:05:23,725   changing mode of build/scripts-3.5/print-blast-xml.py from 644 to 755
2021-01-31T12:05:23,725   changing mode of build/scripts-3.5/print-read-lengths.py from 644 to 755
2021-01-31T12:05:23,726   changing mode of build/scripts-3.5/proteins-to-pathogens.py from 644 to 755
2021-01-31T12:05:23,727   changing mode of build/scripts-3.5/proteins-to-pathogens-civ.py from 644 to 755
2021-01-31T12:05:23,727   changing mode of build/scripts-3.5/randomize-fasta.py from 644 to 755
2021-01-31T12:05:23,728   changing mode of build/scripts-3.5/read-blast-json.py from 644 to 755
2021-01-31T12:05:23,729   changing mode of build/scripts-3.5/read-blast-xml.py from 644 to 755
2021-01-31T12:05:23,729   changing mode of build/scripts-3.5/relabel-newick-tree.py from 644 to 755
2021-01-31T12:05:23,730   changing mode of build/scripts-3.5/run-bwa.py from 644 to 755
2021-01-31T12:05:23,731   changing mode of build/scripts-3.5/run-bowtie2.py from 644 to 755
2021-01-31T12:05:23,731   changing mode of build/scripts-3.5/sam-coverage.py from 644 to 755
2021-01-31T12:05:23,732   changing mode of build/scripts-3.5/sam-coverage-depth.py from 644 to 755
2021-01-31T12:05:23,733   changing mode of build/scripts-3.5/sam-to-fasta-alignment.py from 644 to 755
2021-01-31T12:05:23,733   changing mode of build/scripts-3.5/sam-reference-read-counts.py from 644 to 755
2021-01-31T12:05:23,734   changing mode of build/scripts-3.5/sam-references.py from 644 to 755
2021-01-31T12:05:23,734   changing mode of build/scripts-3.5/sff-to-fastq.py from 644 to 755
2021-01-31T12:05:23,735   changing mode of build/scripts-3.5/split-fasta-by-adaptors.py from 644 to 755
2021-01-31T12:05:23,736   changing mode of build/scripts-3.5/subset-protein-database.py from 644 to 755
2021-01-31T12:05:23,736   changing mode of build/scripts-3.5/summarize-fasta-bases.py from 644 to 755
2021-01-31T12:05:23,737   changing mode of build/scripts-3.5/summarize-reads.py from 644 to 755
2021-01-31T12:05:23,738   changing mode of build/scripts-3.5/translate.py from 644 to 755
2021-01-31T12:05:23,738   changing mode of build/scripts-3.5/trim-primers.py from 644 to 755
2021-01-31T12:05:23,739   changing mode of build/scripts-3.5/trim-reads.py from 644 to 755
2021-01-31T12:05:23,739   changing mode of build/scripts-3.5/write-htcondor-job-spec.py from 644 to 755
2021-01-31T12:05:23,743   installing to build/bdist.linux-armv7l/wheel
2021-01-31T12:05:23,744   running install
2021-01-31T12:05:23,746   running install_lib
2021-01-31T12:05:23,754   creating build/bdist.linux-armv7l
2021-01-31T12:05:23,755   creating build/bdist.linux-armv7l/wheel
2021-01-31T12:05:23,761   creating build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,763   copying build/lib/dark/cigar.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,768   copying build/lib/dark/colors.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,774   copying build/lib/dark/database.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,780   copying build/lib/dark/summarize.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,785   copying build/lib/dark/entrez.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,791   copying build/lib/dark/mutations.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,799   copying build/lib/dark/sam.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,808   copying build/lib/dark/fastq.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,814   copying build/lib/dark/errors.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,821   creating build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,824   copying build/lib/dark/blast/records.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,830   copying build/lib/dark/blast/hacks.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,836   copying build/lib/dark/blast/params.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,842   copying build/lib/dark/blast/score.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,847   copying build/lib/dark/blast/__init__.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,852   copying build/lib/dark/blast/hsp.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,859   copying build/lib/dark/blast/conversion.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,866   copying build/lib/dark/blast/alignments.py -> build/bdist.linux-armv7l/wheel/dark/blast
2021-01-31T12:05:23,874   copying build/lib/dark/titles.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,884   creating build/bdist.linux-armv7l/wheel/dark/diamond
2021-01-31T12:05:23,887   copying build/lib/dark/diamond/sam.py -> build/bdist.linux-armv7l/wheel/dark/diamond
2021-01-31T12:05:23,895   copying build/lib/dark/diamond/run.py -> build/bdist.linux-armv7l/wheel/dark/diamond
2021-01-31T12:05:23,901   copying build/lib/dark/diamond/__init__.py -> build/bdist.linux-armv7l/wheel/dark/diamond
2021-01-31T12:05:23,906   copying build/lib/dark/diamond/hsp.py -> build/bdist.linux-armv7l/wheel/dark/diamond
2021-01-31T12:05:23,913   copying build/lib/dark/diamond/conversion.py -> build/bdist.linux-armv7l/wheel/dark/diamond
2021-01-31T12:05:23,921   copying build/lib/dark/diamond/alignments.py -> build/bdist.linux-armv7l/wheel/dark/diamond
2021-01-31T12:05:23,928   copying build/lib/dark/sequence.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,934   copying build/lib/dark/features.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,942   copying build/lib/dark/fasta.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,949   copying build/lib/dark/dna.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,957   copying build/lib/dark/simplify.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,963   copying build/lib/dark/consensus.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,970   copying build/lib/dark/btop.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,977   copying build/lib/dark/ipynb.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,982   copying build/lib/dark/intervals.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,989   copying build/lib/dark/html.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:23,996   copying build/lib/dark/aligners.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,002   copying build/lib/dark/utils.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,011   copying build/lib/dark/aa.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,021   copying build/lib/dark/fasta_ss.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,027   copying build/lib/dark/distance.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,034   creating build/bdist.linux-armv7l/wheel/dark/civ
2021-01-31T12:05:24,037   copying build/lib/dark/civ/html.py -> build/bdist.linux-armv7l/wheel/dark/civ
2021-01-31T12:05:24,044   copying build/lib/dark/civ/graphics.py -> build/bdist.linux-armv7l/wheel/dark/civ
2021-01-31T12:05:24,052   copying build/lib/dark/civ/proteins.py -> build/bdist.linux-armv7l/wheel/dark/civ
2021-01-31T12:05:24,068   copying build/lib/dark/civ/__init__.py -> build/bdist.linux-armv7l/wheel/dark/civ
2021-01-31T12:05:24,073   copying build/lib/dark/graphics.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,083   copying build/lib/dark/process.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,090   copying build/lib/dark/analyze_reads.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,096   copying build/lib/dark/proteins.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,106   copying build/lib/dark/score.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,112   copying build/lib/dark/fpcache.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,118   copying build/lib/dark/dimension.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,123   copying build/lib/dark/reads.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,136   copying build/lib/dark/codonDistance.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,142   copying build/lib/dark/taxonomy.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,150   copying build/lib/dark/bowtie2.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,156   copying build/lib/dark/genbank.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,162   copying build/lib/dark/__init__.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,166   copying build/lib/dark/ncbidb.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,170   copying build/lib/dark/genomes.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,177   copying build/lib/dark/local_align.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,184   copying build/lib/dark/filter.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,192   copying build/lib/dark/baseimage.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,199   copying build/lib/dark/hsp.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,206   copying build/lib/dark/orfs.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,213   copying build/lib/dark/alignments.py -> build/bdist.linux-armv7l/wheel/dark
2021-01-31T12:05:24,220   running install_egg_info
2021-01-31T12:05:24,269   running egg_info
2021-01-31T12:05:24,271   writing requirements to dark_matter.egg-info/requires.txt
2021-01-31T12:05:24,275   writing dependency_links to dark_matter.egg-info/dependency_links.txt
2021-01-31T12:05:24,279   writing dark_matter.egg-info/PKG-INFO
2021-01-31T12:05:24,284   writing top-level names to dark_matter.egg-info/top_level.txt
2021-01-31T12:05:24,333   reading manifest file 'dark_matter.egg-info/SOURCES.txt'
2021-01-31T12:05:24,374   writing manifest file 'dark_matter.egg-info/SOURCES.txt'
2021-01-31T12:05:24,379   Copying dark_matter.egg-info to build/bdist.linux-armv7l/wheel/dark_matter-3.1.86-py3.5.egg-info
2021-01-31T12:05:24,403   running install_scripts
2021-01-31T12:05:24,538   creating build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data
2021-01-31T12:05:24,540   creating build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,543   copying build/scripts-3.5/convert-blast-xml-to-json.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,548   copying build/scripts-3.5/fasta-subtraction.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,552   copying build/scripts-3.5/find-hits.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,557   copying build/scripts-3.5/proteins-to-pathogens-civ.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,565   copying build/scripts-3.5/alignment-panel-civ.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,573   copying build/scripts-3.5/summarize-reads.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,578   copying build/scripts-3.5/fasta-to-phylip.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,584   copying build/scripts-3.5/sam-to-fasta-alignment.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,590   copying build/scripts-3.5/position-summary.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,595   copying build/scripts-3.5/randomize-fasta.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,601   copying build/scripts-3.5/print-read-lengths.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,606   copying build/scripts-3.5/aa-to-properties.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,612   copying build/scripts-3.5/fasta-diff.sh -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,617   copying build/scripts-3.5/fasta-subset.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,623   copying build/scripts-3.5/bit-score-to-e-value.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,628   copying build/scripts-3.5/codon-distance.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,634   copying build/scripts-3.5/translate.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,639   copying build/scripts-3.5/format-fasta.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,645   copying build/scripts-3.5/print-blast-xml.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,650   copying build/scripts-3.5/cat-json-blast-records.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,655   copying build/scripts-3.5/fasta-identity-table.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,664   copying build/scripts-3.5/fasta-ids.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,669   copying build/scripts-3.5/graph-evalues.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,674   copying build/scripts-3.5/trim-primers.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,680   copying build/scripts-3.5/dna-to-aa.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,686   copying build/scripts-3.5/fasta-count.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,691   copying build/scripts-3.5/alignments-per-read.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,696   copying build/scripts-3.5/write-htcondor-job-spec.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,701   copying build/scripts-3.5/split-fasta-by-adaptors.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,706   copying build/scripts-3.5/proteins-to-pathogens.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,712   copying build/scripts-3.5/sam-reference-read-counts.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,718   copying build/scripts-3.5/run-bwa.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,724   copying build/scripts-3.5/adaptor-distances.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,729   copying build/scripts-3.5/fasta-sort.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,735   copying build/scripts-3.5/filter-hits-to-fasta.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,741   copying build/scripts-3.5/filter-sam.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,748   copying build/scripts-3.5/trim-reads.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,753   copying build/scripts-3.5/local-align.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,758   copying build/scripts-3.5/fasta-base-indices.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
2021-01-31T12:05:24,764   copying build/scripts-3.5/compare-sequences.py -> build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.data/scripts
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2021-01-31T12:05:25,203   creating build/bdist.linux-armv7l/wheel/dark_matter-3.1.86.dist-info/WHEEL
2021-01-31T12:05:26,186   Building wheel for dark-matter (setup.py): finished with status 'done'
2021-01-31T12:05:26,196   Created wheel for dark-matter: filename=dark_matter-3.1.86-py3-none-any.whl size=316331 sha256=fe3ef1aca7bfdb28584d10d97362938d995c2430c3ea27a4f05f3d9f378fc8cc
2021-01-31T12:05:26,196   Stored in directory: /tmp/pip-ephem-wheel-cache-vz5alkkj/wheels/ec/10/53/702044ab706dac0bd04a0c07e9d4234469b22b60983f54b237
2021-01-31T12:05:26,229 Successfully built dark-matter
2021-01-31T12:05:26,288 Removed build tracker: '/tmp/pip-req-tracker-eyqjpb3n'