2021-01-31T21:47:50,635 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality.
2021-01-31T21:47:51,297 Created temporary directory: /tmp/pip-ephem-wheel-cache-6w7wpcl4
2021-01-31T21:47:51,302 Created temporary directory: /tmp/pip-req-tracker-m93eseom
2021-01-31T21:47:51,303 Initialized build tracking at /tmp/pip-req-tracker-m93eseom
2021-01-31T21:47:51,303 Created build tracker: /tmp/pip-req-tracker-m93eseom
2021-01-31T21:47:51,304 Entered build tracker: /tmp/pip-req-tracker-m93eseom
2021-01-31T21:47:51,305 Created temporary directory: /tmp/pip-wheel-tme9ds5u
2021-01-31T21:47:51,368 1 location(s) to search for versions of rcsb-utils-chem:
2021-01-31T21:47:51,368 * https://pypi.org/simple/rcsb-utils-chem/
2021-01-31T21:47:51,369 Fetching project page and analyzing links: https://pypi.org/simple/rcsb-utils-chem/
2021-01-31T21:47:51,371 Getting page https://pypi.org/simple/rcsb-utils-chem/
2021-01-31T21:47:51,376 Found index url https://pypi.org/simple
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2021-01-31T21:47:51,870   Found link https://files.pythonhosted.org/packages/d0/0c/25539acbdf220d74a65ee9aaffb83f8a4c0749ba894816cb95efc6f993e6/rcsb.utils.chem-0.45.tar.gz#sha256=5965c277172093334642bb339cbdcfeabf97229d9e04600698b15cdca2e0490b (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.45
2021-01-31T21:47:51,871   Found link https://files.pythonhosted.org/packages/c4/88/393af3a0dc320e6564464a602d6bd5505264a79d6ac85d422a5309fdf249/rcsb.utils.chem-0.46.tar.gz#sha256=8b6f27fb7bde94db1ff8326373400ea2685166897f8a608dee0c3b35de879d72 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.46
2021-01-31T21:47:51,872   Found link https://files.pythonhosted.org/packages/ea/ec/b15f27f9bade5197117a66a8ca4e3ccddbe1d75329b455b247e0ebeb48ff/rcsb.utils.chem-0.47.tar.gz#sha256=38a34f5e5e7fc51d3e2c29282168828923966348205311d7964a19dc5020b4b7 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.47
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2021-01-31T21:47:51,874   Found link https://files.pythonhosted.org/packages/b7/d5/8d5d3c26db3fc912ddb90a09f89e47cb99fb6b80a2f7f5090811aaeeb8c3/rcsb.utils.chem-0.50.tar.gz#sha256=23bf64d0903f9fb956a1f284694eadf3000d66a93e436df1ef3eea5db4d77536 (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.50
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2021-01-31T21:47:51,876   Found link https://files.pythonhosted.org/packages/cd/21/083168a563c5be1876bfa4ada78dc593f30697bae8973305fdbeb26cd950/rcsb.utils.chem-0.52.tar.gz#sha256=73b24dc870a8e496265ec71ad049313ee24eb5203a9175e79c71034b6028f01c (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.52
2021-01-31T21:47:51,877   Found link https://files.pythonhosted.org/packages/47/fe/93a174dc09eaaeea519b76a55c04f30e8ad9a111d539f3f606c4de6c9f4b/rcsb.utils.chem-0.53.tar.gz#sha256=474ea64c91cc014f1a2120fda8ac653da86a21d8a9a3c0aad0b622d654c50adf (from https://pypi.org/simple/rcsb-utils-chem/), version: 0.53
2021-01-31T21:47:51,908 Given no hashes to check 1 links for project 'rcsb-utils-chem': discarding no candidates
2021-01-31T21:47:51,941 Collecting rcsb-utils-chem==0.53
2021-01-31T21:47:51,944   Created temporary directory: /tmp/pip-unpack-anv5yye5
2021-01-31T21:47:52,173   Downloading rcsb.utils.chem-0.53.tar.gz (72 kB)
2021-01-31T21:47:52,532   Added rcsb-utils-chem==0.53 from https://files.pythonhosted.org/packages/47/fe/93a174dc09eaaeea519b76a55c04f30e8ad9a111d539f3f606c4de6c9f4b/rcsb.utils.chem-0.53.tar.gz#sha256=474ea64c91cc014f1a2120fda8ac653da86a21d8a9a3c0aad0b622d654c50adf to build tracker '/tmp/pip-req-tracker-m93eseom'
2021-01-31T21:47:52,535     Running setup.py (path:/tmp/pip-wheel-tme9ds5u/rcsb-utils-chem_5d31193f179c4426947c14c30ad46a3e/setup.py) egg_info for package rcsb-utils-chem
2021-01-31T21:47:52,538     Created temporary directory: /tmp/pip-pip-egg-info-03jc369y
2021-01-31T21:47:52,539     Running command python setup.py egg_info
2021-01-31T21:47:54,800     running egg_info
2021-01-31T21:47:54,806     creating /tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info
2021-01-31T21:47:54,808     writing entry points to /tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/entry_points.txt
2021-01-31T21:47:54,812     writing requirements to /tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/requires.txt
2021-01-31T21:47:54,814     writing /tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/PKG-INFO
2021-01-31T21:47:54,819     writing top-level names to /tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/top_level.txt
2021-01-31T21:47:54,822     writing dependency_links to /tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/dependency_links.txt
2021-01-31T21:47:54,827     writing manifest file '/tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-31T21:47:55,205     reading manifest file '/tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-31T21:47:55,208     reading manifest template 'MANIFEST.in'
2021-01-31T21:47:55,217     writing manifest file '/tmp/pip-pip-egg-info-03jc369y/rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-31T21:47:55,351   Source in /tmp/pip-wheel-tme9ds5u/rcsb-utils-chem_5d31193f179c4426947c14c30ad46a3e has version 0.53, which satisfies requirement rcsb-utils-chem==0.53 from https://files.pythonhosted.org/packages/47/fe/93a174dc09eaaeea519b76a55c04f30e8ad9a111d539f3f606c4de6c9f4b/rcsb.utils.chem-0.53.tar.gz#sha256=474ea64c91cc014f1a2120fda8ac653da86a21d8a9a3c0aad0b622d654c50adf
2021-01-31T21:47:55,353   Removed rcsb-utils-chem==0.53 from https://files.pythonhosted.org/packages/47/fe/93a174dc09eaaeea519b76a55c04f30e8ad9a111d539f3f606c4de6c9f4b/rcsb.utils.chem-0.53.tar.gz#sha256=474ea64c91cc014f1a2120fda8ac653da86a21d8a9a3c0aad0b622d654c50adf from build tracker '/tmp/pip-req-tracker-m93eseom'
2021-01-31T21:47:55,361 Created temporary directory: /tmp/pip-unpack-2ywtoon7
2021-01-31T21:47:55,362 Building wheels for collected packages: rcsb-utils-chem
2021-01-31T21:47:55,370   Created temporary directory: /tmp/pip-wheel-htf7ujtp
2021-01-31T21:47:55,371   Building wheel for rcsb-utils-chem (setup.py): started
2021-01-31T21:47:55,372   Destination directory: /tmp/pip-wheel-htf7ujtp
2021-01-31T21:47:55,372   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-tme9ds5u/rcsb-utils-chem_5d31193f179c4426947c14c30ad46a3e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-tme9ds5u/rcsb-utils-chem_5d31193f179c4426947c14c30ad46a3e/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-htf7ujtp
2021-01-31T21:47:57,585   running bdist_wheel
2021-01-31T21:47:57,600   running build
2021-01-31T21:47:57,601   running build_py
2021-01-31T21:47:57,940   creating build
2021-01-31T21:47:57,941   creating build/lib
2021-01-31T21:47:57,943   creating build/lib/rcsb
2021-01-31T21:47:57,945   copying rcsb/__init__.py -> build/lib/rcsb
2021-01-31T21:47:57,951   creating build/lib/rcsb/utils
2021-01-31T21:47:57,953   copying rcsb/utils/__init__.py -> build/lib/rcsb/utils
2021-01-31T21:47:57,961   creating build/lib/rcsb/utils/chem
2021-01-31T21:47:57,964   copying rcsb/utils/chem/MolecularFormula.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:57,970   copying rcsb/utils/chem/OeCommonUtils.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:57,976   copying rcsb/utils/chem/CactvsMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:57,983   copying rcsb/utils/chem/ChemCompSearchWrapper.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:57,992   copying rcsb/utils/chem/OeSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:57,1000   copying rcsb/utils/chem/PdbxChemCompConstants.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,005   copying rcsb/utils/chem/OeChemCompUtils.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,013   copying rcsb/utils/chem/OeMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,021   copying rcsb/utils/chem/cactvsAnnotateMol.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,027   copying rcsb/utils/chem/OeDepictAlign.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,037   copying rcsb/utils/chem/OeMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,048   copying rcsb/utils/chem/OeSubStructSearchUtils.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,055   copying rcsb/utils/chem/ChemCompIndexProvider.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,063   copying rcsb/utils/chem/ChemCompDepictWrapper.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,069   copying rcsb/utils/chem/PdbxChemComp.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,075   copying rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,081   copying rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,087   copying rcsb/utils/chem/IoUtils.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,093   copying rcsb/utils/chem/FailList.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,109   copying rcsb/utils/chem/__init__.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,114   copying rcsb/utils/chem/OeIoUtils.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,124   copying rcsb/utils/chem/OeAlignUtils.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,130   copying rcsb/utils/chem/RdMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,136   copying rcsb/utils/chem/OeDepict.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,141   copying rcsb/utils/chem/ObMoleculeFactory.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,146   copying rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,152   copying rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/lib/rcsb/utils/chem
2021-01-31T21:47:58,180   installing to build/bdist.linux-armv7l/wheel
2021-01-31T21:47:58,180   running install
2021-01-31T21:47:58,182   running install_lib
2021-01-31T21:47:58,190   creating build/bdist.linux-armv7l
2021-01-31T21:47:58,191   creating build/bdist.linux-armv7l/wheel
2021-01-31T21:47:58,195   creating build/bdist.linux-armv7l/wheel/rcsb
2021-01-31T21:47:58,198   creating build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-31T21:47:58,202   creating build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,205   copying build/lib/rcsb/utils/chem/MolecularFormula.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,209   copying build/lib/rcsb/utils/chem/OeCommonUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,214   copying build/lib/rcsb/utils/chem/CactvsMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,219   copying build/lib/rcsb/utils/chem/ChemCompSearchWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,227   copying build/lib/rcsb/utils/chem/OeSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,234   copying build/lib/rcsb/utils/chem/PdbxChemCompConstants.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,240   copying build/lib/rcsb/utils/chem/OeChemCompUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,247   copying build/lib/rcsb/utils/chem/OeMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,253   copying build/lib/rcsb/utils/chem/cactvsAnnotateMol.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,258   copying build/lib/rcsb/utils/chem/OeDepictAlign.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,267   copying build/lib/rcsb/utils/chem/OeMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,277   copying build/lib/rcsb/utils/chem/OeSubStructSearchUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,285   copying build/lib/rcsb/utils/chem/ChemCompIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,292   copying build/lib/rcsb/utils/chem/ChemCompDepictWrapper.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,300   copying build/lib/rcsb/utils/chem/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,307   copying build/lib/rcsb/utils/chem/ChemCompSearchIndexProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,315   copying build/lib/rcsb/utils/chem/ChemCompMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,322   copying build/lib/rcsb/utils/chem/IoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,328   copying build/lib/rcsb/utils/chem/FailList.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,344   copying build/lib/rcsb/utils/chem/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,350   copying build/lib/rcsb/utils/chem/OeIoUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,359   copying build/lib/rcsb/utils/chem/OeAlignUtils.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,367   copying build/lib/rcsb/utils/chem/RdMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,374   copying build/lib/rcsb/utils/chem/OeDepict.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,381   copying build/lib/rcsb/utils/chem/ObMoleculeFactory.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,388   copying build/lib/rcsb/utils/chem/OeSearchMoleculeProvider.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,395   copying build/lib/rcsb/utils/chem/MoleculeAnnotationsCompare.py -> build/bdist.linux-armv7l/wheel/rcsb/utils/chem
2021-01-31T21:47:58,402   copying build/lib/rcsb/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb/utils
2021-01-31T21:47:58,408   copying build/lib/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/rcsb
2021-01-31T21:47:58,413   running install_egg_info
2021-01-31T21:47:58,457   running egg_info
2021-01-31T21:47:58,459   writing requirements to rcsb.utils.chem.egg-info/requires.txt
2021-01-31T21:47:58,462   writing dependency_links to rcsb.utils.chem.egg-info/dependency_links.txt
2021-01-31T21:47:58,464   writing top-level names to rcsb.utils.chem.egg-info/top_level.txt
2021-01-31T21:47:58,467   writing entry points to rcsb.utils.chem.egg-info/entry_points.txt
2021-01-31T21:47:58,469   writing rcsb.utils.chem.egg-info/PKG-INFO
2021-01-31T21:47:58,492   reading manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-31T21:47:58,500   reading manifest template 'MANIFEST.in'
2021-01-31T21:47:58,511   writing manifest file 'rcsb.utils.chem.egg-info/SOURCES.txt'
2021-01-31T21:47:58,514   Copying rcsb.utils.chem.egg-info to build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.53-py3.5.egg-info
2021-01-31T21:47:58,551   running install_scripts
2021-01-31T21:47:58,775   creating build/bdist.linux-armv7l/wheel/rcsb.utils.chem-0.53.dist-info/WHEEL
2021-01-31T21:47:59,158   Building wheel for rcsb-utils-chem (setup.py): finished with status 'done'
2021-01-31T21:47:59,164   Created wheel for rcsb-utils-chem: filename=rcsb.utils.chem-0.53-py2.py3-none-any.whl size=90868 sha256=7dd69e3b8048ab0cfb098a727961c43ba976c3a936eac4bcfb1c845832333453
2021-01-31T21:47:59,165   Stored in directory: /tmp/pip-ephem-wheel-cache-6w7wpcl4/wheels/e7/6d/8d/59991572132b1265304676b5d8083bab6854957e21c4e39ba4
2021-01-31T21:47:59,196 Successfully built rcsb-utils-chem
2021-01-31T21:47:59,217 Removed build tracker: '/tmp/pip-req-tracker-m93eseom'