2021-02-01T17:29:02,580 Created temporary directory: /tmp/pip-ephem-wheel-cache-p0qxljuh 2021-02-01T17:29:02,583 Created temporary directory: /tmp/pip-req-tracker-zn26seus 2021-02-01T17:29:02,584 Initialized build tracking at /tmp/pip-req-tracker-zn26seus 2021-02-01T17:29:02,584 Created build tracker: /tmp/pip-req-tracker-zn26seus 2021-02-01T17:29:02,584 Entered build tracker: /tmp/pip-req-tracker-zn26seus 2021-02-01T17:29:02,585 Created temporary directory: /tmp/pip-wheel-wryvcjy4 2021-02-01T17:29:02,622 1 location(s) to search for versions of pomoxis: 2021-02-01T17:29:02,622 * https://pypi.org/simple/pomoxis/ 2021-02-01T17:29:02,622 Fetching project page and analyzing links: https://pypi.org/simple/pomoxis/ 2021-02-01T17:29:02,623 Getting page https://pypi.org/simple/pomoxis/ 2021-02-01T17:29:02,624 Found index url https://pypi.org/simple 2021-02-01T17:29:02,731 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/c0/59/a56134534e8982b057c383eb347cf395305c28c3fcd47e42ca3866401212/pomoxis-0.2.2a1.tar.gz#sha256=62f5121020ce00f056714240d50d580d0c23a64d502a80ea529d431655367e88 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,732 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/7f/90/ed673752a756a3477dcc242f938c46aa7fabd7e9a061438a8606c3a99e6e/pomoxis-0.2.2a2.tar.gz#sha256=cfed0307424929a9bb1e44f6acd2e1d8b5741532581ae38ce510d565979247c6 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,733 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,733 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/79/63/59892ab3f851f6088ba6c5f97fc1e871cbf6ce6e310b8da1e54d4d1427c1/pomoxis-0.2.3.tar.gz#sha256=e87e632ca3ef172590e059ddb7282d933294439ef71c3df67d9b56a969a45b8d (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,734 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz#sha256=2f4a45d1bc48725a24ede76b07cd66bb9432e0b382685f4ea0abc4715eb96fc2 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,735 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/2d/53/aac67c49cd9c3e371dfe4ae88674d68271e8d5eb3d53111edb4c44efa4d0/pomoxis-0.2.5.tar.gz#sha256=014894e06e107701593d2d470785f9ac940a6907a456cae1b2e65447f0bcf2e9 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,735 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/c1/4b/6b3e8a6407ddacfc1d8e4f22482eb2edf3ab34fe830a83bf2d4003302499/pomoxis-0.3.0a1.tar.gz#sha256=d19daeeff38498c5b270c49a3796c459b3506e0188a79b80de6a5fde914db7fd (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,736 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/34/ec/2b29e6232c6b4ba278071f99ee5e6804d6a751887cd4e0302f12692ac4c4/pomoxis-0.3.0.tar.gz#sha256=945ed681b1bfc6e22c0c217b6c7854762408718ee5bd29732ce1aa2b8fb873a2 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,736 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/da/76/32271d7ddec228f6d9b1ed618fc602f51a26d20e3bea7c06ae9bae74f6a0/pomoxis-0.3.1.tar.gz#sha256=08cec3223b638480187605bb0a3a46e9c09fc401a050e292156c4e56b839564a (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,737 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/81/7c/6fa149a088ec5cdca9133e3cf6a3f36138ad98361cc993f64c7148a98ae7/pomoxis-0.3.2.tar.gz#sha256=9fda874f5b242881c75cb5eabe4a2580a09f7d278e21be4cf08c3658e3048ea3 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,737 Link requires a different Python (3.7.3 not in: '>=3.5.2, <3.7'): https://files.pythonhosted.org/packages/68/66/c63fc68165d3c8fe1dc68bd49570bb5a169c6deb6a65e551809b65dbece4/pomoxis-0.3.4.tar.gz#sha256=f05a7b0d9080b5ac4f573fcef6431f60823c6c04c09f1b9bb7569049abec23c1 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7) 2021-02-01T17:29:02,738 Found link https://files.pythonhosted.org/packages/79/95/7b52ac88f7f0e96966844fb8900a653f85580a0a9067f21ee5d851904277/pomoxis-0.3.5.tar.gz#sha256=77013a1d23a166289fc156c67d4927c14ace97d477bddee621a9c75ccae51344 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.6), version: 0.3.5 2021-02-01T17:29:02,750 Given no hashes to check 1 links for project 'pomoxis': discarding no candidates 2021-02-01T17:29:02,764 Collecting pomoxis==0.3.5 2021-02-01T17:29:02,766 Created temporary directory: /tmp/pip-unpack-edttaj_3 2021-02-01T17:29:02,943 Downloading pomoxis-0.3.5.tar.gz (91 kB) 2021-02-01T17:29:03,062 Added pomoxis==0.3.5 from https://files.pythonhosted.org/packages/79/95/7b52ac88f7f0e96966844fb8900a653f85580a0a9067f21ee5d851904277/pomoxis-0.3.5.tar.gz#sha256=77013a1d23a166289fc156c67d4927c14ace97d477bddee621a9c75ccae51344 to build tracker '/tmp/pip-req-tracker-zn26seus' 2021-02-01T17:29:03,063 Running setup.py (path:/tmp/pip-wheel-wryvcjy4/pomoxis_2d1e2df5282a46c4a1fd725e324cd04b/setup.py) egg_info for package pomoxis 2021-02-01T17:29:03,064 Created temporary directory: /tmp/pip-pip-egg-info-od8h7j5j 2021-02-01T17:29:03,065 Running command python setup.py egg_info 2021-02-01T17:29:04,066 running egg_info 2021-02-01T17:29:04,069 creating /tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info 2021-02-01T17:29:04,071 writing /tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/PKG-INFO 2021-02-01T17:29:04,074 writing dependency_links to /tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/dependency_links.txt 2021-02-01T17:29:04,077 writing entry points to /tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/entry_points.txt 2021-02-01T17:29:04,079 writing requirements to /tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/requires.txt 2021-02-01T17:29:04,080 writing top-level names to /tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/top_level.txt 2021-02-01T17:29:04,082 writing manifest file '/tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/SOURCES.txt' 2021-02-01T17:29:04,229 reading manifest file '/tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/SOURCES.txt' 2021-02-01T17:29:04,231 reading manifest template 'MANIFEST.in' 2021-02-01T17:29:04,234 no previously-included directories found matching 'build' 2021-02-01T17:29:04,235 no previously-included directories found matching 'docs' 2021-02-01T17:29:04,237 writing manifest file '/tmp/pip-pip-egg-info-od8h7j5j/pomoxis.egg-info/SOURCES.txt' 2021-02-01T17:29:04,300 Source in /tmp/pip-wheel-wryvcjy4/pomoxis_2d1e2df5282a46c4a1fd725e324cd04b has version 0.3.5, which satisfies requirement pomoxis==0.3.5 from https://files.pythonhosted.org/packages/79/95/7b52ac88f7f0e96966844fb8900a653f85580a0a9067f21ee5d851904277/pomoxis-0.3.5.tar.gz#sha256=77013a1d23a166289fc156c67d4927c14ace97d477bddee621a9c75ccae51344 2021-02-01T17:29:04,301 Removed pomoxis==0.3.5 from https://files.pythonhosted.org/packages/79/95/7b52ac88f7f0e96966844fb8900a653f85580a0a9067f21ee5d851904277/pomoxis-0.3.5.tar.gz#sha256=77013a1d23a166289fc156c67d4927c14ace97d477bddee621a9c75ccae51344 from build tracker '/tmp/pip-req-tracker-zn26seus' 2021-02-01T17:29:04,307 Created temporary directory: /tmp/pip-unpack-bae4k4r6 2021-02-01T17:29:04,308 Building wheels for collected packages: pomoxis 2021-02-01T17:29:04,312 Created temporary directory: /tmp/pip-wheel-ct_udgij 2021-02-01T17:29:04,313 Building wheel for pomoxis (setup.py): started 2021-02-01T17:29:04,313 Destination directory: /tmp/pip-wheel-ct_udgij 2021-02-01T17:29:04,313 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-wryvcjy4/pomoxis_2d1e2df5282a46c4a1fd725e324cd04b/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-wryvcjy4/pomoxis_2d1e2df5282a46c4a1fd725e324cd04b/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ct_udgij 2021-02-01T17:29:05,429 running bdist_wheel 2021-02-01T17:29:05,433 running build 2021-02-01T17:29:05,433 running build_py 2021-02-01T17:29:05,562 creating build 2021-02-01T17:29:05,562 creating build/lib 2021-02-01T17:29:05,563 creating build/lib/pomoxis 2021-02-01T17:29:05,564 copying pomoxis/trim_alignments.py -> build/lib/pomoxis 2021-02-01T17:29:05,566 copying pomoxis/qscores_from_summary.py -> build/lib/pomoxis 2021-02-01T17:29:05,568 copying pomoxis/subsample_bam.py -> build/lib/pomoxis 2021-02-01T17:29:05,570 copying pomoxis/find_indels.py -> build/lib/pomoxis 2021-02-01T17:29:05,573 copying pomoxis/assess_homopolymers.py -> build/lib/pomoxis 2021-02-01T17:29:05,575 copying pomoxis/stats_from_bam.py -> build/lib/pomoxis 2021-02-01T17:29:05,577 copying pomoxis/common_errors_from_bam.py -> build/lib/pomoxis 2021-02-01T17:29:05,579 copying pomoxis/bio.py -> build/lib/pomoxis 2021-02-01T17:29:05,581 copying pomoxis/summary_from_stats.py -> build/lib/pomoxis 2021-02-01T17:29:05,583 copying pomoxis/__init__.py -> build/lib/pomoxis 2021-02-01T17:29:05,585 copying pomoxis/catalogue_errors.py -> build/lib/pomoxis 2021-02-01T17:29:05,588 copying pomoxis/coverage_from_bam.py -> build/lib/pomoxis 2021-02-01T17:29:05,591 copying pomoxis/util.py -> build/lib/pomoxis 2021-02-01T17:29:05,593 copying pomoxis/ref_seqs_from_bam.py -> build/lib/pomoxis 2021-02-01T17:29:05,597 running build_scripts 2021-02-01T17:29:05,597 creating build/scripts-3.7 2021-02-01T17:29:05,599 copying scripts/assess_assembly -> build/scripts-3.7 2021-02-01T17:29:05,602 copying scripts/intersect_assembly_errors -> build/scripts-3.7 2021-02-01T17:29:05,605 copying scripts/mini_align -> build/scripts-3.7 2021-02-01T17:29:05,609 copying scripts/mini_assemble -> build/scripts-3.7 2021-02-01T17:29:05,611 installing to build/bdist.linux-armv7l/wheel 2021-02-01T17:29:05,612 running install 2021-02-01T17:29:05,613 running install_lib 2021-02-01T17:29:05,618 creating build/bdist.linux-armv7l 2021-02-01T17:29:05,618 creating build/bdist.linux-armv7l/wheel 2021-02-01T17:29:05,620 creating build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,621 copying build/lib/pomoxis/trim_alignments.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,624 copying build/lib/pomoxis/qscores_from_summary.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,626 copying build/lib/pomoxis/subsample_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,629 copying build/lib/pomoxis/find_indels.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,632 copying build/lib/pomoxis/assess_homopolymers.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,635 copying build/lib/pomoxis/stats_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,637 copying build/lib/pomoxis/common_errors_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,640 copying build/lib/pomoxis/bio.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,642 copying build/lib/pomoxis/summary_from_stats.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,644 copying build/lib/pomoxis/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,647 copying build/lib/pomoxis/catalogue_errors.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,650 copying build/lib/pomoxis/coverage_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,653 copying build/lib/pomoxis/util.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,655 copying build/lib/pomoxis/ref_seqs_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis 2021-02-01T17:29:05,657 running install_egg_info 2021-02-01T17:29:05,681 running egg_info 2021-02-01T17:29:05,681 writing pomoxis.egg-info/PKG-INFO 2021-02-01T17:29:05,684 writing dependency_links to pomoxis.egg-info/dependency_links.txt 2021-02-01T17:29:05,686 writing entry points to pomoxis.egg-info/entry_points.txt 2021-02-01T17:29:05,687 writing requirements to pomoxis.egg-info/requires.txt 2021-02-01T17:29:05,688 writing top-level names to pomoxis.egg-info/top_level.txt 2021-02-01T17:29:05,693 reading manifest file 'pomoxis.egg-info/SOURCES.txt' 2021-02-01T17:29:05,695 reading manifest template 'MANIFEST.in' 2021-02-01T17:29:05,697 no previously-included directories found matching 'build' 2021-02-01T17:29:05,698 no previously-included directories found matching 'docs' 2021-02-01T17:29:05,700 writing manifest file 'pomoxis.egg-info/SOURCES.txt' 2021-02-01T17:29:05,702 Copying pomoxis.egg-info to build/bdist.linux-armv7l/wheel/pomoxis-0.3.5-py3.7.egg-info 2021-02-01T17:29:05,718 running install_scripts 2021-02-01T17:29:05,778 creating build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data 2021-02-01T17:29:05,778 creating build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts 2021-02-01T17:29:05,780 copying build/scripts-3.7/mini_align -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts 2021-02-01T17:29:05,782 copying build/scripts-3.7/assess_assembly -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts 2021-02-01T17:29:05,785 copying build/scripts-3.7/mini_assemble -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts 2021-02-01T17:29:05,787 copying build/scripts-3.7/intersect_assembly_errors -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts 2021-02-01T17:29:05,789 changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts/mini_align to 755 2021-02-01T17:29:05,789 changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts/assess_assembly to 755 2021-02-01T17:29:05,789 changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts/mini_assemble to 755 2021-02-01T17:29:05,789 changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.data/scripts/intersect_assembly_errors to 755 2021-02-01T17:29:05,822 adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*") 2021-02-01T17:29:05,828 creating build/bdist.linux-armv7l/wheel/pomoxis-0.3.5.dist-info/WHEEL 2021-02-01T17:29:05,831 creating '/tmp/pip-wheel-ct_udgij/pomoxis-0.3.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-02-01T17:29:05,834 adding 'pomoxis/__init__.py' 2021-02-01T17:29:05,837 adding 'pomoxis/assess_homopolymers.py' 2021-02-01T17:29:05,838 adding 'pomoxis/bio.py' 2021-02-01T17:29:05,845 adding 'pomoxis/catalogue_errors.py' 2021-02-01T17:29:05,847 adding 'pomoxis/common_errors_from_bam.py' 2021-02-01T17:29:05,849 adding 'pomoxis/coverage_from_bam.py' 2021-02-01T17:29:05,851 adding 'pomoxis/find_indels.py' 2021-02-01T17:29:05,852 adding 'pomoxis/qscores_from_summary.py' 2021-02-01T17:29:05,853 adding 'pomoxis/ref_seqs_from_bam.py' 2021-02-01T17:29:05,855 adding 'pomoxis/stats_from_bam.py' 2021-02-01T17:29:05,857 adding 'pomoxis/subsample_bam.py' 2021-02-01T17:29:05,859 adding 'pomoxis/summary_from_stats.py' 2021-02-01T17:29:05,860 adding 'pomoxis/trim_alignments.py' 2021-02-01T17:29:05,862 adding 'pomoxis/util.py' 2021-02-01T17:29:05,865 adding 'pomoxis-0.3.5.data/scripts/assess_assembly' 2021-02-01T17:29:05,866 adding 'pomoxis-0.3.5.data/scripts/intersect_assembly_errors' 2021-02-01T17:29:05,868 adding 'pomoxis-0.3.5.data/scripts/mini_align' 2021-02-01T17:29:05,869 adding 'pomoxis-0.3.5.data/scripts/mini_assemble' 2021-02-01T17:29:05,873 adding 'pomoxis-0.3.5.dist-info/LICENSE.md' 2021-02-01T17:29:05,875 adding 'pomoxis-0.3.5.dist-info/METADATA' 2021-02-01T17:29:05,876 adding 'pomoxis-0.3.5.dist-info/WHEEL' 2021-02-01T17:29:05,877 adding 'pomoxis-0.3.5.dist-info/entry_points.txt' 2021-02-01T17:29:05,877 adding 'pomoxis-0.3.5.dist-info/top_level.txt' 2021-02-01T17:29:05,878 adding 'pomoxis-0.3.5.dist-info/RECORD' 2021-02-01T17:29:05,880 removing build/bdist.linux-armv7l/wheel 2021-02-01T17:29:05,956 Building wheel for pomoxis (setup.py): finished with status 'done' 2021-02-01T17:29:05,959 Created wheel for pomoxis: filename=pomoxis-0.3.5-py3-none-any.whl size=56439 sha256=f14ff6d018253597bed7a822c967b08b0c1326d69de44c9f61c7351a84ed5839 2021-02-01T17:29:05,960 Stored in directory: /tmp/pip-ephem-wheel-cache-p0qxljuh/wheels/a5/95/cb/6810936e27b5d470a175491ce95c308c4ac147090f6c540fff 2021-02-01T17:29:05,970 Successfully built pomoxis 2021-02-01T17:29:05,974 Removed build tracker: '/tmp/pip-req-tracker-zn26seus'