2021-02-11T12:15:06,752 Created temporary directory: /tmp/pip-ephem-wheel-cache-r7lm64e6
2021-02-11T12:15:06,755 Created temporary directory: /tmp/pip-req-tracker-7sxzkfx8
2021-02-11T12:15:06,755 Initialized build tracking at /tmp/pip-req-tracker-7sxzkfx8
2021-02-11T12:15:06,756 Created build tracker: /tmp/pip-req-tracker-7sxzkfx8
2021-02-11T12:15:06,756 Entered build tracker: /tmp/pip-req-tracker-7sxzkfx8
2021-02-11T12:15:06,756 Created temporary directory: /tmp/pip-wheel-ssxr8_1j
2021-02-11T12:15:06,790 1 location(s) to search for versions of adaptivepele:
2021-02-11T12:15:06,790 * https://pypi.org/simple/adaptivepele/
2021-02-11T12:15:06,790 Fetching project page and analyzing links: https://pypi.org/simple/adaptivepele/
2021-02-11T12:15:06,790 Getting page https://pypi.org/simple/adaptivepele/
2021-02-11T12:15:06,792 Found index url https://pypi.org/simple
2021-02-11T12:15:06,881   Found link https://files.pythonhosted.org/packages/33/ee/476a691d254663e61362e5c2754180ff0b92980e6db1afc829265f001706/AdaptivePELE-1.5.1.tar.gz#sha256=5f96081e47a08fa4040ba21a477ba77d590f7feba4980aef9468305fe9f5f282 (from https://pypi.org/simple/adaptivepele/), version: 1.5.1
2021-02-11T12:15:06,881   Found link https://files.pythonhosted.org/packages/d9/82/be65cbae39642401f6e6923e5511fd466d107920ee9673bb84581a243a4e/AdaptivePELE-1.5.2.tar.gz#sha256=7df75c5c57821492d1ba86e44d41b65e6a9105afe6048e85e993741579683848 (from https://pypi.org/simple/adaptivepele/), version: 1.5.2
2021-02-11T12:15:06,882   Found link https://files.pythonhosted.org/packages/48/3b/f12bfdcfd7f0fdcb2f58d659ff94c26666767eec4ca8454750a3241c395e/AdaptivePELE-1.6.tar.gz#sha256=afc51a35222361e6c0caf880e1d52e91b5658dbe4740f82a3460a97ebaa48bf5 (from https://pypi.org/simple/adaptivepele/), version: 1.6
2021-02-11T12:15:06,882   Found link https://files.pythonhosted.org/packages/d0/1b/f731952d133f4a684ae4376f67513af80d1f759b9ef4d6137767e0fc8ed9/AdaptivePELE-1.6.2.tar.gz#sha256=01891c877f6615a876c61c6bf1d68930d4af63750eb3f1a4e7e23ff0f962bbd5 (from https://pypi.org/simple/adaptivepele/), version: 1.6.2
2021-02-11T12:15:06,882   Found link https://files.pythonhosted.org/packages/25/2c/65b787dc210294855b8f27abeb4a7761f25fce34e0b8bfd56779c679440d/AdaptivePELE-1.6.3.tar.gz#sha256=34be232bc04bde2dcc4ebd900dd9c71e6f25eed93b7c875463c07d3dd8ce1aa9 (from https://pypi.org/simple/adaptivepele/), version: 1.6.3
2021-02-11T12:15:06,882   Found link https://files.pythonhosted.org/packages/2b/34/d4545814438fa2992d83f5be0389f6465ab3e542ada0c02f90dbc4cc5695/AdaptivePELE-1.7.tar.gz#sha256=21d8643eb2fbf9ffe733a996fa8851cd569d9ca6f77f303211813eeb856bc5eb (from https://pypi.org/simple/adaptivepele/), version: 1.7
2021-02-11T12:15:06,897 Given no hashes to check 1 links for project 'adaptivepele': discarding no candidates
2021-02-11T12:15:06,912 Collecting adaptivepele==1.7
2021-02-11T12:15:06,913   Created temporary directory: /tmp/pip-unpack-2ghw_is7
2021-02-11T12:15:06,978   Downloading AdaptivePELE-1.7.tar.gz (7.0 MB)
2021-02-11T12:15:09,609   Added adaptivepele==1.7 from https://files.pythonhosted.org/packages/2b/34/d4545814438fa2992d83f5be0389f6465ab3e542ada0c02f90dbc4cc5695/AdaptivePELE-1.7.tar.gz#sha256=21d8643eb2fbf9ffe733a996fa8851cd569d9ca6f77f303211813eeb856bc5eb to build tracker '/tmp/pip-req-tracker-7sxzkfx8'
2021-02-11T12:15:09,610     Running setup.py (path:/tmp/pip-wheel-ssxr8_1j/adaptivepele_d96f544772f64bd59fe917bdeeceb646/setup.py) egg_info for package adaptivepele
2021-02-11T12:15:09,611     Created temporary directory: /tmp/pip-pip-egg-info-iw5ltgmi
2021-02-11T12:15:09,611     Running command python setup.py egg_info
2021-02-11T12:15:10,983     Warning: 'classifiers' should be a list, got type 'tuple'
2021-02-11T12:15:11,093     running egg_info
2021-02-11T12:15:11,095     creating /tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info
2021-02-11T12:15:11,096     writing /tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info/PKG-INFO
2021-02-11T12:15:11,098     writing dependency_links to /tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info/dependency_links.txt
2021-02-11T12:15:11,100     writing requirements to /tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info/requires.txt
2021-02-11T12:15:11,101     writing top-level names to /tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info/top_level.txt
2021-02-11T12:15:11,103     writing manifest file '/tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info/SOURCES.txt'
2021-02-11T12:15:11,253     reading manifest file '/tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info/SOURCES.txt'
2021-02-11T12:15:11,255     reading manifest template 'MANIFEST.in'
2021-02-11T12:15:11,311     writing manifest file '/tmp/pip-pip-egg-info-iw5ltgmi/AdaptivePELE.egg-info/SOURCES.txt'
2021-02-11T12:15:11,410   Source in /tmp/pip-wheel-ssxr8_1j/adaptivepele_d96f544772f64bd59fe917bdeeceb646 has version 1.7, which satisfies requirement adaptivepele==1.7 from https://files.pythonhosted.org/packages/2b/34/d4545814438fa2992d83f5be0389f6465ab3e542ada0c02f90dbc4cc5695/AdaptivePELE-1.7.tar.gz#sha256=21d8643eb2fbf9ffe733a996fa8851cd569d9ca6f77f303211813eeb856bc5eb
2021-02-11T12:15:11,411   Removed adaptivepele==1.7 from https://files.pythonhosted.org/packages/2b/34/d4545814438fa2992d83f5be0389f6465ab3e542ada0c02f90dbc4cc5695/AdaptivePELE-1.7.tar.gz#sha256=21d8643eb2fbf9ffe733a996fa8851cd569d9ca6f77f303211813eeb856bc5eb from build tracker '/tmp/pip-req-tracker-7sxzkfx8'
2021-02-11T12:15:11,415 Created temporary directory: /tmp/pip-unpack-whr9zzn6
2021-02-11T12:15:11,416 Building wheels for collected packages: adaptivepele
2021-02-11T12:15:11,420   Created temporary directory: /tmp/pip-wheel-ffhce1zo
2021-02-11T12:15:11,421   Building wheel for adaptivepele (setup.py): started
2021-02-11T12:15:11,421   Destination directory: /tmp/pip-wheel-ffhce1zo
2021-02-11T12:15:11,422   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ssxr8_1j/adaptivepele_d96f544772f64bd59fe917bdeeceb646/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ssxr8_1j/adaptivepele_d96f544772f64bd59fe917bdeeceb646/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ffhce1zo
2021-02-11T12:15:12,707   Warning: 'classifiers' should be a list, got type 'tuple'
2021-02-11T12:15:12,826   running bdist_wheel
2021-02-11T12:15:12,831   running build
2021-02-11T12:15:12,831   running build_py
2021-02-11T12:15:12,956   creating build
2021-02-11T12:15:12,957   creating build/lib.linux-armv7l-3.7
2021-02-11T12:15:12,958   creating build/lib.linux-armv7l-3.7/AdaptivePELE
2021-02-11T12:15:12,959   copying AdaptivePELE/automateRoundsAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2021-02-11T12:15:12,961   copying AdaptivePELE/makeRelease.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2021-02-11T12:15:12,963   copying AdaptivePELE/runAllTests.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2021-02-11T12:15:12,968   copying AdaptivePELE/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2021-02-11T12:15:12,970   copying AdaptivePELE/adaptiveSampling.py -> build/lib.linux-armv7l-3.7/AdaptivePELE
2021-02-11T12:15:12,975   creating build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,976   copying AdaptivePELE/analysis/plot3DNetwork.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,979   copying AdaptivePELE/analysis/makePNGs.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,981   copying AdaptivePELE/analysis/correctRMSD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,984   copying AdaptivePELE/analysis/cluster.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,986   copying AdaptivePELE/analysis/foldersFirstBindingEvent.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,988   copying AdaptivePELE/analysis/reportSimulation.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,991   copying AdaptivePELE/analysis/clusters_lagtime_grid.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,993   copying AdaptivePELE/analysis/bestStructs.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,996   copying AdaptivePELE/analysis/extract_ligand_traj.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:12,998   copying AdaptivePELE/analysis/compareClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,000   copying AdaptivePELE/analysis/count_clusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,003   copying AdaptivePELE/analysis/analysis_utils.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,005   copying AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,007   copying AdaptivePELE/analysis/filter_by_radius.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,010   copying AdaptivePELE/analysis/trajectory_processing.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,013   copying AdaptivePELE/analysis/autoCorrelation.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,015   copying AdaptivePELE/analysis/pathwayRMSD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,017   copying AdaptivePELE/analysis/unbinding.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,020   copying AdaptivePELE/analysis/histCM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,022   copying AdaptivePELE/analysis/analyseClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,024   copying AdaptivePELE/analysis/writeTrajToSnapshot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,026   copying AdaptivePELE/analysis/plotAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,029   copying AdaptivePELE/analysis/plotRMSF.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,032   copying AdaptivePELE/analysis/writeNetworkFiles.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,034   copying AdaptivePELE/analysis/writeClusteringStructures.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,036   copying AdaptivePELE/analysis/plotSpawningClusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,038   copying AdaptivePELE/analysis/standarize_MD_energies.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,041   copying AdaptivePELE/analysis/analyse.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,043   copying AdaptivePELE/analysis/interactivePlot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,046   copying AdaptivePELE/analysis/simple_postprocessing.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,048   copying AdaptivePELE/analysis/selectOnPlot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,051   copying AdaptivePELE/analysis/networkCM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,053   copying AdaptivePELE/analysis/calculateSASAvalues.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,055   copying AdaptivePELE/analysis/findfirstbindingevent.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,057   copying AdaptivePELE/analysis/calculateDistances.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,060   copying AdaptivePELE/analysis/splitTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,062   copying AdaptivePELE/analysis/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,064   copying AdaptivePELE/analysis/generateBox.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,066   copying AdaptivePELE/analysis/addRejectedSteps.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,069   copying AdaptivePELE/analysis/convertTrajectory.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,071   copying AdaptivePELE/analysis/simulationToCsv.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,073   copying AdaptivePELE/analysis/crossValidationClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,075   copying AdaptivePELE/analysis/numberOfClusters.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,078   copying AdaptivePELE/analysis/dehidratate_and_align.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,080   copying AdaptivePELE/analysis/clusterAdaptiveRun.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,083   copying AdaptivePELE/analysis/identifyClusterSnapshot.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/analysis
2021-02-11T12:15:13,086   creating build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,087   copying AdaptivePELE/utilities/conda_deployment.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,089   copying AdaptivePELE/utilities/generate_topology_object.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,092   copying AdaptivePELE/utilities/PDBLoader.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,095   copying AdaptivePELE/utilities/utilities.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,098   copying AdaptivePELE/utilities/clusteringUtilities.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,100   copying AdaptivePELE/utilities/synchronization.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,103   copying AdaptivePELE/utilities/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/utilities
2021-02-11T12:15:13,105   creating build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2021-02-11T12:15:13,106   copying AdaptivePELE/clustering/clusteringTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2021-02-11T12:15:13,108   copying AdaptivePELE/clustering/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2021-02-11T12:15:13,110   copying AdaptivePELE/clustering/thresholdcalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2021-02-11T12:15:13,112   copying AdaptivePELE/clustering/clustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2021-02-11T12:15:13,117   copying AdaptivePELE/clustering/thresholdcalculatortypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/clustering
2021-02-11T12:15:13,120   creating build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2021-02-11T12:15:13,121   copying AdaptivePELE/constants/blockNames.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2021-02-11T12:15:13,124   copying AdaptivePELE/constants/symmetries.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2021-02-11T12:15:13,126   copying AdaptivePELE/constants/buildEnvironments.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2021-02-11T12:15:13,128   copying AdaptivePELE/constants/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2021-02-11T12:15:13,130   copying AdaptivePELE/constants/constants.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/constants
2021-02-11T12:15:13,133   creating build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,134   copying AdaptivePELE/tests/testReporter.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,137   copying AdaptivePELE/tests/testMD.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,139   copying AdaptivePELE/tests/testAtomset.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,142   copying AdaptivePELE/tests/testMD_CUDA.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,144   copying AdaptivePELE/tests/testClustering.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,147   copying AdaptivePELE/tests/testDensityCalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,149   copying AdaptivePELE/tests/testThresholdcalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,151   copying AdaptivePELE/tests/testAdaptiveSampling.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,154   copying AdaptivePELE/tests/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,156   copying AdaptivePELE/tests/testSpawning.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/tests
2021-02-11T12:15:13,159   creating build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2021-02-11T12:15:13,160   copying AdaptivePELE/simulation/simulationrunner.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2021-02-11T12:15:13,166   copying AdaptivePELE/simulation/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2021-02-11T12:15:13,167   copying AdaptivePELE/simulation/simulationTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2021-02-11T12:15:13,170   copying AdaptivePELE/simulation/openmm_simulations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/simulation
2021-02-11T12:15:13,174   creating build/lib.linux-armv7l-3.7/AdaptivePELE/atomset
2021-02-11T12:15:13,175   copying AdaptivePELE/atomset/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/atomset
2021-02-11T12:15:13,177   copying AdaptivePELE/atomset/setup.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/atomset
2021-02-11T12:15:13,179   creating build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2021-02-11T12:15:13,180   copying AdaptivePELE/validator/controlFileValidator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2021-02-11T12:15:13,183   copying AdaptivePELE/validator/validatorBlockNames.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2021-02-11T12:15:13,186   copying AdaptivePELE/validator/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/validator
2021-02-11T12:15:13,188   creating build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2021-02-11T12:15:13,189   copying AdaptivePELE/spawning/densitycalculatortypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2021-02-11T12:15:13,191   copying AdaptivePELE/spawning/densitycalculator.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2021-02-11T12:15:13,194   copying AdaptivePELE/spawning/spawning.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2021-02-11T12:15:13,198   copying AdaptivePELE/spawning/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2021-02-11T12:15:13,199   copying AdaptivePELE/spawning/spawningTypes.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/spawning
2021-02-11T12:15:13,203   creating build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,204   copying AdaptivePELE/freeEnergies/ownBuildMSM.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,206   copying AdaptivePELE/freeEnergies/cluster.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,209   copying AdaptivePELE/freeEnergies/estimate.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,212   copying AdaptivePELE/freeEnergies/extractCoords.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,215   copying AdaptivePELE/freeEnergies/extendTrajectories.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,218   copying AdaptivePELE/freeEnergies/getRepresentativeStructures.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,220   copying AdaptivePELE/freeEnergies/estimateDG.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,223   copying AdaptivePELE/freeEnergies/runMarkovChainModel.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,225   copying AdaptivePELE/freeEnergies/utilitiesFreeEnergies.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,227   copying AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,229   copying AdaptivePELE/freeEnergies/computeDGGrid.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,232   copying AdaptivePELE/freeEnergies/prepareMSMFolders.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,234   copying AdaptivePELE/freeEnergies/checkDetailedBalance.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,236   copying AdaptivePELE/freeEnergies/computeDeltaG.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,239   copying AdaptivePELE/freeEnergies/__init__.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,241   copying AdaptivePELE/freeEnergies/calculateDGiterations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,243   copying AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,245   copying AdaptivePELE/freeEnergies/estimateDGAdaptive.py -> build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:15:13,260   running build_ext
2021-02-11T12:15:13,265   cythoning AdaptivePELE/atomset/atomset.pyx to AdaptivePELE/atomset/atomset.c
2021-02-11T12:15:13,889   /usr/local/lib/python3.7/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-ssxr8_1j/adaptivepele_d96f544772f64bd59fe917bdeeceb646/AdaptivePELE/atomset/atomset.pxd
2021-02-11T12:15:13,889     tree = Parsing.p_module(s, pxd, full_module_name)
2021-02-11T12:15:16,294   skipping 'AdaptivePELE/atomset/SymmetryContactMapEvaluator.c' Cython extension (up-to-date)
2021-02-11T12:15:16,295   skipping 'AdaptivePELE/atomset/RMSDCalculator.c' Cython extension (up-to-date)
2021-02-11T12:15:16,296   skipping 'AdaptivePELE/freeEnergies/utils.c' Cython extension (up-to-date)
2021-02-11T12:15:16,296   building 'AdaptivePELE.atomset.atomset' extension
2021-02-11T12:15:16,297   creating build/temp.linux-armv7l-3.7
2021-02-11T12:15:16,297   creating build/temp.linux-armv7l-3.7/AdaptivePELE
2021-02-11T12:15:16,298   creating build/temp.linux-armv7l-3.7/AdaptivePELE/atomset
2021-02-11T12:15:16,299   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/atomset/atomset.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.o
2021-02-11T12:15:16,698   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2021-02-11T12:15:16,698                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-02-11T12:15:16,698                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-02-11T12:15:16,699                    from AdaptivePELE/atomset/atomset.c:610:
2021-02-11T12:15:16,699   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-02-11T12:15:16,699    #warning "Using deprecated NumPy API, disable it with " \
2021-02-11T12:15:16,699     ^~~~~~~
2021-02-11T12:15:47,104   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.cpython-37m-arm-linux-gnueabihf.so
2021-02-11T12:15:47,336   building 'AdaptivePELE.atomset.SymmetryContactMapEvaluator' extension
2021-02-11T12:15:47,337   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/atomset/SymmetryContactMapEvaluator.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.o
2021-02-11T12:15:47,683   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2021-02-11T12:15:47,683                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-02-11T12:15:47,684                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-02-11T12:15:47,684                    from AdaptivePELE/atomset/SymmetryContactMapEvaluator.c:610:
2021-02-11T12:15:47,684   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-02-11T12:15:47,684    #warning "Using deprecated NumPy API, disable it with " \
2021-02-11T12:15:47,684     ^~~~~~~
2021-02-11T12:16:00,276   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-37m-arm-linux-gnueabihf.so
2021-02-11T12:16:00,458   building 'AdaptivePELE.atomset.RMSDCalculator' extension
2021-02-11T12:16:00,459   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/atomset -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/atomset/RMSDCalculator.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.o
2021-02-11T12:16:00,807   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2021-02-11T12:16:00,807                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-02-11T12:16:00,808                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-02-11T12:16:00,808                    from AdaptivePELE/atomset/RMSDCalculator.c:610:
2021-02-11T12:16:00,808   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-02-11T12:16:00,808    #warning "Using deprecated NumPy API, disable it with " \
2021-02-11T12:16:00,808     ^~~~~~~
2021-02-11T12:16:08,480   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.cpython-37m-arm-linux-gnueabihf.so
2021-02-11T12:16:08,632   building 'AdaptivePELE.freeEnergies.utils' extension
2021-02-11T12:16:08,632   creating build/temp.linux-armv7l-3.7/AdaptivePELE/freeEnergies
2021-02-11T12:16:08,633   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IAdaptivePELE -IAdaptivePELE/freeEnergies -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c AdaptivePELE/freeEnergies/utils.c -o build/temp.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.o
2021-02-11T12:16:09,000   In file included from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2021-02-11T12:16:09,000                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2021-02-11T12:16:09,000                    from /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2021-02-11T12:16:09,000                    from AdaptivePELE/freeEnergies/utils.c:610:
2021-02-11T12:16:09,001   /usr/local/lib/python3.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2021-02-11T12:16:09,001    #warning "Using deprecated NumPy API, disable it with " \
2021-02-11T12:16:09,001     ^~~~~~~
2021-02-11T12:16:25,168   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.o -o build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.cpython-37m-arm-linux-gnueabihf.so
2021-02-11T12:16:25,379   installing to build/bdist.linux-armv7l/wheel
2021-02-11T12:16:25,380   running install
2021-02-11T12:16:25,381   running install_lib
2021-02-11T12:16:25,385   creating build/bdist.linux-armv7l
2021-02-11T12:16:25,386   creating build/bdist.linux-armv7l/wheel
2021-02-11T12:16:25,388   creating build/bdist.linux-armv7l/wheel/AdaptivePELE
2021-02-11T12:16:25,390   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,391   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plot3DNetwork.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,394   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/makePNGs.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,396   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/correctRMSD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,398   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/cluster.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,401   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/foldersFirstBindingEvent.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,403   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/reportSimulation.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,406   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/clusters_lagtime_grid.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,409   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/bestStructs.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,411   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/extract_ligand_traj.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,413   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/compareClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,416   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/count_clusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,419   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/analysis_utils.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,421   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,423   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/filter_by_radius.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,426   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/trajectory_processing.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,428   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/autoCorrelation.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,431   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/pathwayRMSD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,433   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/unbinding.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,435   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/histCM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,438   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/analyseClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,440   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/writeTrajToSnapshot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,442   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plotAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,446   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plotRMSF.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,448   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/writeNetworkFiles.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,450   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/writeClusteringStructures.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,452   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/plotSpawningClusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,455   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/standarize_MD_energies.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,457   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/analyse.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,459   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/interactivePlot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,462   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/simple_postprocessing.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,465   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/selectOnPlot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,468   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/networkCM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,470   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/calculateSASAvalues.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,473   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/findfirstbindingevent.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,475   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/calculateDistances.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,478   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/splitTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,480   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,481   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/generateBox.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,484   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/addRejectedSteps.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,486   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/convertTrajectory.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,489   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/simulationToCsv.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,491   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/crossValidationClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,494   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/numberOfClusters.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,497   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/dehidratate_and_align.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,499   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/clusterAdaptiveRun.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,502   copying build/lib.linux-armv7l-3.7/AdaptivePELE/analysis/identifyClusterSnapshot.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/analysis
2021-02-11T12:16:25,504   copying build/lib.linux-armv7l-3.7/AdaptivePELE/automateRoundsAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2021-02-11T12:16:25,507   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,508   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/conda_deployment.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,511   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/generate_topology_object.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,513   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/PDBLoader.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,517   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/utilities.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,521   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/clusteringUtilities.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,523   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/synchronization.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,526   copying build/lib.linux-armv7l-3.7/AdaptivePELE/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/utilities
2021-02-11T12:16:25,529   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2021-02-11T12:16:25,530   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/clusteringTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2021-02-11T12:16:25,532   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2021-02-11T12:16:25,534   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/thresholdcalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2021-02-11T12:16:25,537   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/clustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2021-02-11T12:16:25,544   copying build/lib.linux-armv7l-3.7/AdaptivePELE/clustering/thresholdcalculatortypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/clustering
2021-02-11T12:16:25,546   copying build/lib.linux-armv7l-3.7/AdaptivePELE/makeRelease.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2021-02-11T12:16:25,549   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2021-02-11T12:16:25,551   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/blockNames.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2021-02-11T12:16:25,554   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/symmetries.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2021-02-11T12:16:25,556   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/buildEnvironments.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2021-02-11T12:16:25,559   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2021-02-11T12:16:25,561   copying build/lib.linux-armv7l-3.7/AdaptivePELE/constants/constants.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/constants
2021-02-11T12:16:25,565   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,566   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testReporter.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,569   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testMD.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,571   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testAtomset.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,575   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testMD_CUDA.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,577   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testClustering.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,580   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testDensityCalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,582   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testThresholdcalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,585   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testAdaptiveSampling.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,588   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,594   copying build/lib.linux-armv7l-3.7/AdaptivePELE/tests/testSpawning.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/tests
2021-02-11T12:16:25,597   copying build/lib.linux-armv7l-3.7/AdaptivePELE/runAllTests.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2021-02-11T12:16:25,600   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2021-02-11T12:16:25,601   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/simulationrunner.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2021-02-11T12:16:25,608   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2021-02-11T12:16:25,610   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/simulationTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2021-02-11T12:16:25,612   copying build/lib.linux-armv7l-3.7/AdaptivePELE/simulation/openmm_simulations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/simulation
2021-02-11T12:16:25,618   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2021-02-11T12:16:25,619   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/atomset.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2021-02-11T12:16:25,669   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/RMSDCalculator.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2021-02-11T12:16:25,679   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2021-02-11T12:16:25,695   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2021-02-11T12:16:25,697   copying build/lib.linux-armv7l-3.7/AdaptivePELE/atomset/setup.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/atomset
2021-02-11T12:16:25,699   copying build/lib.linux-armv7l-3.7/AdaptivePELE/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2021-02-11T12:16:25,701   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2021-02-11T12:16:25,702   copying build/lib.linux-armv7l-3.7/AdaptivePELE/validator/controlFileValidator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2021-02-11T12:16:25,704   copying build/lib.linux-armv7l-3.7/AdaptivePELE/validator/validatorBlockNames.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2021-02-11T12:16:25,706   copying build/lib.linux-armv7l-3.7/AdaptivePELE/validator/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/validator
2021-02-11T12:16:25,708   copying build/lib.linux-armv7l-3.7/AdaptivePELE/adaptiveSampling.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE
2021-02-11T12:16:25,712   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2021-02-11T12:16:25,713   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/densitycalculatortypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2021-02-11T12:16:25,715   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/densitycalculator.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2021-02-11T12:16:25,718   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/spawning.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2021-02-11T12:16:25,722   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2021-02-11T12:16:25,724   copying build/lib.linux-armv7l-3.7/AdaptivePELE/spawning/spawningTypes.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/spawning
2021-02-11T12:16:25,726   creating build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,727   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/ownBuildMSM.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,730   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/cluster.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,732   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/estimate.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,735   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/extractCoords.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,738   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/extendTrajectories.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,740   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/getRepresentativeStructures.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,742   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/estimateDG.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,745   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/runMarkovChainModel.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,747   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utilitiesFreeEnergies.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,749   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/utils.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,772   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,774   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/computeDGGrid.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,776   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/prepareMSMFolders.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,778   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/checkDetailedBalance.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,780   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/computeDeltaG.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,782   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/__init__.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,784   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/calculateDGiterations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,786   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,788   copying build/lib.linux-armv7l-3.7/AdaptivePELE/freeEnergies/estimateDGAdaptive.py -> build/bdist.linux-armv7l/wheel/AdaptivePELE/freeEnergies
2021-02-11T12:16:25,790   running install_egg_info
2021-02-11T12:16:25,815   running egg_info
2021-02-11T12:16:25,816   writing AdaptivePELE.egg-info/PKG-INFO
2021-02-11T12:16:25,818   writing dependency_links to AdaptivePELE.egg-info/dependency_links.txt
2021-02-11T12:16:25,820   writing requirements to AdaptivePELE.egg-info/requires.txt
2021-02-11T12:16:25,821   writing top-level names to AdaptivePELE.egg-info/top_level.txt
2021-02-11T12:16:25,857   reading manifest file 'AdaptivePELE.egg-info/SOURCES.txt'
2021-02-11T12:16:25,865   reading manifest template 'MANIFEST.in'
2021-02-11T12:16:25,917   writing manifest file 'AdaptivePELE.egg-info/SOURCES.txt'
2021-02-11T12:16:25,919   Copying AdaptivePELE.egg-info to build/bdist.linux-armv7l/wheel/AdaptivePELE-1.7-py3.7.egg-info
2021-02-11T12:16:25,931   running install_scripts
2021-02-11T12:16:25,983   creating build/bdist.linux-armv7l/wheel/AdaptivePELE-1.7.dist-info/WHEEL
2021-02-11T12:16:25,986   creating '/tmp/pip-wheel-ffhce1zo/AdaptivePELE-1.7-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-02-11T12:16:25,989   adding 'AdaptivePELE/__init__.py'
2021-02-11T12:16:25,994   adding 'AdaptivePELE/adaptiveSampling.py'
2021-02-11T12:16:25,996   adding 'AdaptivePELE/automateRoundsAdaptive.py'
2021-02-11T12:16:25,997   adding 'AdaptivePELE/makeRelease.py'
2021-02-11T12:16:25,999   adding 'AdaptivePELE/runAllTests.py'
2021-02-11T12:16:26,003   adding 'AdaptivePELE/analysis/__init__.py'
2021-02-11T12:16:26,004   adding 'AdaptivePELE/analysis/addRejectedSteps.py'
2021-02-11T12:16:26,006   adding 'AdaptivePELE/analysis/analyse.py'
2021-02-11T12:16:26,008   adding 'AdaptivePELE/analysis/analyseClustering.py'
2021-02-11T12:16:26,009   adding 'AdaptivePELE/analysis/analysis_utils.py'
2021-02-11T12:16:26,011   adding 'AdaptivePELE/analysis/autoCorrelation.py'
2021-02-11T12:16:26,013   adding 'AdaptivePELE/analysis/backtrackAdaptiveTrajectory.py'
2021-02-11T12:16:26,015   adding 'AdaptivePELE/analysis/bestStructs.py'
2021-02-11T12:16:26,017   adding 'AdaptivePELE/analysis/calculateDistances.py'
2021-02-11T12:16:26,019   adding 'AdaptivePELE/analysis/calculateSASAvalues.py'
2021-02-11T12:16:26,022   adding 'AdaptivePELE/analysis/cluster.py'
2021-02-11T12:16:26,025   adding 'AdaptivePELE/analysis/clusterAdaptiveRun.py'
2021-02-11T12:16:26,027   adding 'AdaptivePELE/analysis/clusters_lagtime_grid.py'
2021-02-11T12:16:26,030   adding 'AdaptivePELE/analysis/compareClustering.py'
2021-02-11T12:16:26,031   adding 'AdaptivePELE/analysis/convertTrajectory.py'
2021-02-11T12:16:26,034   adding 'AdaptivePELE/analysis/correctRMSD.py'
2021-02-11T12:16:26,036   adding 'AdaptivePELE/analysis/count_clusters.py'
2021-02-11T12:16:26,037   adding 'AdaptivePELE/analysis/crossValidationClustering.py'
2021-02-11T12:16:26,039   adding 'AdaptivePELE/analysis/dehidratate_and_align.py'
2021-02-11T12:16:26,040   adding 'AdaptivePELE/analysis/extract_ligand_traj.py'
2021-02-11T12:16:26,042   adding 'AdaptivePELE/analysis/filter_by_radius.py'
2021-02-11T12:16:26,043   adding 'AdaptivePELE/analysis/findfirstbindingevent.py'
2021-02-11T12:16:26,044   adding 'AdaptivePELE/analysis/foldersFirstBindingEvent.py'
2021-02-11T12:16:26,046   adding 'AdaptivePELE/analysis/generateBox.py'
2021-02-11T12:16:26,047   adding 'AdaptivePELE/analysis/histCM.py'
2021-02-11T12:16:26,049   adding 'AdaptivePELE/analysis/identifyClusterSnapshot.py'
2021-02-11T12:16:26,051   adding 'AdaptivePELE/analysis/interactivePlot.py'
2021-02-11T12:16:26,053   adding 'AdaptivePELE/analysis/makePNGs.py'
2021-02-11T12:16:26,055   adding 'AdaptivePELE/analysis/networkCM.py'
2021-02-11T12:16:26,056   adding 'AdaptivePELE/analysis/numberOfClusters.py'
2021-02-11T12:16:26,058   adding 'AdaptivePELE/analysis/pathwayRMSD.py'
2021-02-11T12:16:26,059   adding 'AdaptivePELE/analysis/plot3DNetwork.py'
2021-02-11T12:16:26,062   adding 'AdaptivePELE/analysis/plotAdaptive.py'
2021-02-11T12:16:26,063   adding 'AdaptivePELE/analysis/plotRMSF.py'
2021-02-11T12:16:26,065   adding 'AdaptivePELE/analysis/plotSpawningClusters.py'
2021-02-11T12:16:26,066   adding 'AdaptivePELE/analysis/reportSimulation.py'
2021-02-11T12:16:26,069   adding 'AdaptivePELE/analysis/selectOnPlot.py'
2021-02-11T12:16:26,070   adding 'AdaptivePELE/analysis/simple_postprocessing.py'
2021-02-11T12:16:26,072   adding 'AdaptivePELE/analysis/simulationToCsv.py'
2021-02-11T12:16:26,073   adding 'AdaptivePELE/analysis/splitTrajectory.py'
2021-02-11T12:16:26,075   adding 'AdaptivePELE/analysis/standarize_MD_energies.py'
2021-02-11T12:16:26,076   adding 'AdaptivePELE/analysis/trajectory_processing.py'
2021-02-11T12:16:26,078   adding 'AdaptivePELE/analysis/unbinding.py'
2021-02-11T12:16:26,079   adding 'AdaptivePELE/analysis/writeClusteringStructures.py'
2021-02-11T12:16:26,080   adding 'AdaptivePELE/analysis/writeNetworkFiles.py'
2021-02-11T12:16:26,082   adding 'AdaptivePELE/analysis/writeTrajToSnapshot.py'
2021-02-11T12:16:26,169   adding 'AdaptivePELE/atomset/RMSDCalculator.cpython-37m-arm-linux-gnueabihf.so'
2021-02-11T12:16:26,311   adding 'AdaptivePELE/atomset/SymmetryContactMapEvaluator.cpython-37m-arm-linux-gnueabihf.so'
2021-02-11T12:16:26,317   adding 'AdaptivePELE/atomset/__init__.py'
2021-02-11T12:16:26,619   adding 'AdaptivePELE/atomset/atomset.cpython-37m-arm-linux-gnueabihf.so'
2021-02-11T12:16:26,631   adding 'AdaptivePELE/atomset/setup.py'
2021-02-11T12:16:26,633   adding 'AdaptivePELE/clustering/__init__.py'
2021-02-11T12:16:26,642   adding 'AdaptivePELE/clustering/clustering.py'
2021-02-11T12:16:26,644   adding 'AdaptivePELE/clustering/clusteringTypes.py'
2021-02-11T12:16:26,645   adding 'AdaptivePELE/clustering/thresholdcalculator.py'
2021-02-11T12:16:26,646   adding 'AdaptivePELE/clustering/thresholdcalculatortypes.py'
2021-02-11T12:16:26,648   adding 'AdaptivePELE/constants/__init__.py'
2021-02-11T12:16:26,650   adding 'AdaptivePELE/constants/blockNames.py'
2021-02-11T12:16:26,651   adding 'AdaptivePELE/constants/buildEnvironments.py'
2021-02-11T12:16:26,652   adding 'AdaptivePELE/constants/constants.py'
2021-02-11T12:16:26,654   adding 'AdaptivePELE/constants/symmetries.py'
2021-02-11T12:16:26,656   adding 'AdaptivePELE/freeEnergies/__init__.py'
2021-02-11T12:16:26,657   adding 'AdaptivePELE/freeEnergies/calculateAdaptiveDGiterations.py'
2021-02-11T12:16:26,658   adding 'AdaptivePELE/freeEnergies/calculateDGiterations.py'
2021-02-11T12:16:26,660   adding 'AdaptivePELE/freeEnergies/checkDetailedBalance.py'
2021-02-11T12:16:26,662   adding 'AdaptivePELE/freeEnergies/cluster.py'
2021-02-11T12:16:26,664   adding 'AdaptivePELE/freeEnergies/computeDGGrid.py'
2021-02-11T12:16:26,666   adding 'AdaptivePELE/freeEnergies/computeDeltaG.py'
2021-02-11T12:16:26,668   adding 'AdaptivePELE/freeEnergies/estimate.py'
2021-02-11T12:16:26,670   adding 'AdaptivePELE/freeEnergies/estimateDG.py'
2021-02-11T12:16:26,672   adding 'AdaptivePELE/freeEnergies/estimateDGAdaptive.py'
2021-02-11T12:16:26,674   adding 'AdaptivePELE/freeEnergies/extendTrajectories.py'
2021-02-11T12:16:26,678   adding 'AdaptivePELE/freeEnergies/extractCoords.py'
2021-02-11T12:16:26,680   adding 'AdaptivePELE/freeEnergies/getRepresentativeStructures.py'
2021-02-11T12:16:26,681   adding 'AdaptivePELE/freeEnergies/ownBuildMSM.py'
2021-02-11T12:16:26,683   adding 'AdaptivePELE/freeEnergies/prepareMSMFolders.py'
2021-02-11T12:16:26,685   adding 'AdaptivePELE/freeEnergies/runMarkovChainModel.py'
2021-02-11T12:16:26,686   adding 'AdaptivePELE/freeEnergies/utilitiesFreeEnergies.py'
2021-02-11T12:16:26,882   adding 'AdaptivePELE/freeEnergies/utils.cpython-37m-arm-linux-gnueabihf.so'
2021-02-11T12:16:26,889   adding 'AdaptivePELE/freeEnergies/writeExtractedCoordsAsPDB.py'
2021-02-11T12:16:26,890   adding 'AdaptivePELE/simulation/__init__.py'
2021-02-11T12:16:26,895   adding 'AdaptivePELE/simulation/openmm_simulations.py'
2021-02-11T12:16:26,896   adding 'AdaptivePELE/simulation/simulationTypes.py'
2021-02-11T12:16:26,905   adding 'AdaptivePELE/simulation/simulationrunner.py'
2021-02-11T12:16:26,909   adding 'AdaptivePELE/spawning/__init__.py'
2021-02-11T12:16:26,910   adding 'AdaptivePELE/spawning/densitycalculator.py'
2021-02-11T12:16:26,912   adding 'AdaptivePELE/spawning/densitycalculatortypes.py'
2021-02-11T12:16:26,919   adding 'AdaptivePELE/spawning/spawning.py'
2021-02-11T12:16:26,921   adding 'AdaptivePELE/spawning/spawningTypes.py'
2021-02-11T12:16:26,922   adding 'AdaptivePELE/tests/__init__.py'
2021-02-11T12:16:26,924   adding 'AdaptivePELE/tests/testAdaptiveSampling.py'
2021-02-11T12:16:26,927   adding 'AdaptivePELE/tests/testAtomset.py'
2021-02-11T12:16:26,928   adding 'AdaptivePELE/tests/testClustering.py'
2021-02-11T12:16:26,930   adding 'AdaptivePELE/tests/testDensityCalculator.py'
2021-02-11T12:16:26,931   adding 'AdaptivePELE/tests/testMD.py'
2021-02-11T12:16:26,932   adding 'AdaptivePELE/tests/testMD_CUDA.py'
2021-02-11T12:16:26,934   adding 'AdaptivePELE/tests/testReporter.py'
2021-02-11T12:16:26,936   adding 'AdaptivePELE/tests/testSpawning.py'
2021-02-11T12:16:26,937   adding 'AdaptivePELE/tests/testThresholdcalculator.py'
2021-02-11T12:16:26,942   adding 'AdaptivePELE/utilities/PDBLoader.py'
2021-02-11T12:16:26,943   adding 'AdaptivePELE/utilities/__init__.py'
2021-02-11T12:16:26,944   adding 'AdaptivePELE/utilities/clusteringUtilities.py'
2021-02-11T12:16:26,945   adding 'AdaptivePELE/utilities/conda_deployment.py'
2021-02-11T12:16:26,947   adding 'AdaptivePELE/utilities/generate_topology_object.py'
2021-02-11T12:16:26,949   adding 'AdaptivePELE/utilities/synchronization.py'
2021-02-11T12:16:26,953   adding 'AdaptivePELE/utilities/utilities.py'
2021-02-11T12:16:26,955   adding 'AdaptivePELE/validator/__init__.py'
2021-02-11T12:16:26,957   adding 'AdaptivePELE/validator/controlFileValidator.py'
2021-02-11T12:16:26,958   adding 'AdaptivePELE/validator/validatorBlockNames.py'
2021-02-11T12:16:26,961   adding 'AdaptivePELE-1.7.dist-info/METADATA'
2021-02-11T12:16:26,962   adding 'AdaptivePELE-1.7.dist-info/WHEEL'
2021-02-11T12:16:26,963   adding 'AdaptivePELE-1.7.dist-info/top_level.txt'
2021-02-11T12:16:26,965   adding 'AdaptivePELE-1.7.dist-info/RECORD'
2021-02-11T12:16:26,996   removing build/bdist.linux-armv7l/wheel
2021-02-11T12:16:27,328   Building wheel for adaptivepele (setup.py): finished with status 'done'
2021-02-11T12:16:27,349   Created wheel for adaptivepele: filename=AdaptivePELE-1.7-cp37-cp37m-linux_armv7l.whl size=1623866 sha256=9ceafd1bdad9148abd951ec26b53c062af8565c6ed7df8a4833b0a5b1af150b6
2021-02-11T12:16:27,350   Stored in directory: /tmp/pip-ephem-wheel-cache-r7lm64e6/wheels/fb/b8/c9/ca287c0cc22e4feabbeaddfafec61e38a01b08db641c76a7ba
2021-02-11T12:16:27,365 Successfully built adaptivepele
2021-02-11T12:16:27,412 Removed build tracker: '/tmp/pip-req-tracker-7sxzkfx8'