2021-02-12T18:54:44,491 DEPRECATION: Python 3.5 reached the end of its life on September 13th, 2020. Please upgrade your Python as Python 3.5 is no longer maintained. pip 21.0 will drop support for Python 3.5 in January 2021. pip 21.0 will remove support for this functionality. 2021-02-12T18:54:45,049 Created temporary directory: /tmp/pip-ephem-wheel-cache-ot_3oa2j 2021-02-12T18:54:45,054 Created temporary directory: /tmp/pip-req-tracker-bg3l6tea 2021-02-12T18:54:45,054 Initialized build tracking at /tmp/pip-req-tracker-bg3l6tea 2021-02-12T18:54:45,055 Created build tracker: /tmp/pip-req-tracker-bg3l6tea 2021-02-12T18:54:45,055 Entered build tracker: /tmp/pip-req-tracker-bg3l6tea 2021-02-12T18:54:45,056 Created temporary directory: /tmp/pip-wheel-b0uz9baz 2021-02-12T18:54:45,111 1 location(s) to search for versions of python-bioformats: 2021-02-12T18:54:45,111 * https://pypi.org/simple/python-bioformats/ 2021-02-12T18:54:45,112 Fetching project page and analyzing links: https://pypi.org/simple/python-bioformats/ 2021-02-12T18:54:45,114 Getting page https://pypi.org/simple/python-bioformats/ 2021-02-12T18:54:45,118 Found index url https://pypi.org/simple 2021-02-12T18:54:45,355 Found link https://files.pythonhosted.org/packages/e8/d2/3feffac7e5a219de826bc9e56c78b0e63f51dda1623a4a257faa19461d36/python-bioformats-1.0.0pr1.tar.gz#sha256=259117c18990f2c3d4b9c6ec5b3888942b6f9ca804932d27401272013a500ea9 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr1 2021-02-12T18:54:45,356 Found link https://files.pythonhosted.org/packages/b9/f8/53a8a14fca7724b245a2bfcf69bd753e85c862f674b9c26b1cc75126eda7/python-bioformats-1.0.0pr2.tar.gz#sha256=9fabdd830c08f144511b4c32f26576106363c0cc993d30a098ecb64e7591631b (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr2 2021-02-12T18:54:45,357 Found link https://files.pythonhosted.org/packages/f0/c7/7fb50a03bd1a9bfb51a2743e710cd588940f59bdf9525fb6bf019a91dca0/python-bioformats-1.0.0pr3.tar.gz#sha256=f0a431d40ac9ae2573a73c938bb70e2bce256843b0c8bc9ce071f4af233d48d9 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr3 2021-02-12T18:54:45,358 Found link https://files.pythonhosted.org/packages/38/77/c318682a2c6c8d500ec872958e87304b88af91658a8fdced9ae2785ad30c/python-bioformats-1.0.0pr7.tar.gz#sha256=3a07dc8327b98eb6acab076626b58e75123e1ed491be0a83cc6ac5adb1b1dd7f (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr7 2021-02-12T18:54:45,359 Found link https://files.pythonhosted.org/packages/48/cf/a953738d347bbe831228073b51f637a9c22e109950536e10b7181027a16d/python-bioformats-1.0.0pr8.tar.gz#sha256=9581ef8f10c98f63882169b3bad579d0143177fcf4826cc593e8d4378cad72bd (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr8 2021-02-12T18:54:45,360 Found link https://files.pythonhosted.org/packages/91/1b/4d977041003d61a7877114e1583c849e87abf35627cec20b05bb99bee961/python-bioformats-1.0.0.tar.gz#sha256=1004979909af391f0bbe1aa3c22739f9aae5f8205a56b2301586f480883d11c1 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0 2021-02-12T18:54:45,361 Found link https://files.pythonhosted.org/packages/c6/e8/e429243d1a79bf7f713b7e92aac4bf61eac8c0c1fd3c45b423cb66adeaea/python-bioformats-1.0.1.tar.gz#sha256=2c1b2dac2c950cfebe61e6275d7f815302f55e0ec100c5e49605e792241104bc (from https://pypi.org/simple/python-bioformats/), version: 1.0.1 2021-02-12T18:54:45,361 Found link https://files.pythonhosted.org/packages/d9/bc/4a6e02faf0aed2a913014ea7130ecf8b0c7216e9d706dd3c2853920d87cf/python-bioformats-1.0.1.zip#sha256=f372d8d10a7016a13689a27dd3de68c4978f5f6b05bf7f75602c600fe5000252 (from https://pypi.org/simple/python-bioformats/), version: 1.0.1 2021-02-12T18:54:45,362 Found link https://files.pythonhosted.org/packages/09/76/46e4aa01d4e6dd99647c2b57f280d8509bda7e56985177ca866a7001e486/python-bioformats-1.0.3.zip#sha256=9efc3ac8a7894b64d6eef9de989329cdf8a410e2febf2b1443ecc795da5fec25 (from https://pypi.org/simple/python-bioformats/), version: 1.0.3 2021-02-12T18:54:45,363 Skipping link: unsupported archive 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https://files.pythonhosted.org/packages/53/d3/7e45a8e0e512b42e006cefaa199ea29e1b2c90124c2d2bf1e3aaf337919d/python-bioformats-1.5.1.tar.gz#sha256=d29e5058e9b746ba070cb5ac1cb7af9f0eb150d2e48b105c844d5b10f5361056 (from https://pypi.org/simple/python-bioformats/), version: 1.5.1 2021-02-12T18:54:45,401 Found link https://files.pythonhosted.org/packages/dd/e8/b4a3648207ea897b810a595098c314ad6666ef66c49a20281fc0fa0b2a91/python-bioformats-1.5.2.tar.gz#sha256=2fe03c2aa9ea59326a81f6e582944046cad77ee0797c9b691d39ee0b29de68ee (from https://pypi.org/simple/python-bioformats/), version: 1.5.2 2021-02-12T18:54:45,402 Skipping link: none of the wheel's tags match: py2-none-any: https://files.pythonhosted.org/packages/85/81/a6abd3e367cbbcd9419ebe476557766bc4e4aa662b2ea2def79f508c8b61/python_bioformats-1.5.2-py2-none-any.whl#sha256=4cf9f36a32e34e53c50c2baba1892fba0356300d4fd2f50fa3385b7d133b662e (from https://pypi.org/simple/python-bioformats/) 2021-02-12T18:54:45,403 Found link https://files.pythonhosted.org/packages/52/cf/b95d5952d3f00b6d3ad240fd5031a9c086468c50667d3c1c7a80bf02b541/python-bioformats-4.0.0rc3.tar.gz#sha256=6ac139866863659ff7375c43b52a314e8a413e49248bbcb1f82585f6858b598d (from https://pypi.org/simple/python-bioformats/), version: 4.0.0rc3 2021-02-12T18:54:45,404 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/30/ae/3d65f9a37d00fbcd163a69fc0d008842e65efdb505facd497cbc3f9d41e9/python_bioformats-4.0.0rc3-py3.8.egg#sha256=51de94f7b74b8fd203314ef46480faf99a8a592a6c3803e8ad75cb5fb91bbbe0 (from https://pypi.org/simple/python-bioformats/) 2021-02-12T18:54:45,404 Found link https://files.pythonhosted.org/packages/51/1b/dfcc50a914489f3ac29b0d88b329fa84a2df2f4c2ae2cefa9f9a332f10d0/python-bioformats-4.0.0rc4.tar.gz#sha256=8fd48e10fb55bf293649ce0582a890d7ea2aad02a39b7a5899d8a51004789be9 (from https://pypi.org/simple/python-bioformats/), version: 4.0.0rc4 2021-02-12T18:54:45,405 Skipping link: none of the wheel's tags match: py2-none-any: https://files.pythonhosted.org/packages/c4/10/772e58a4da51ea1c58ac1ee840d364d36d85f8552ab573847b3a6eece2a3/python_bioformats-4.0.0rc4-py2-none-any.whl#sha256=0012d647286a01b0d6a0b9d94f40e331cc77e2c946ca353d1b4812c3cd22bfdd (from https://pypi.org/simple/python-bioformats/) 2021-02-12T18:54:45,406 Found link https://files.pythonhosted.org/packages/e2/35/c1d5b33e275c0545083b8cb38213d78f85269a8a3e1859b6b36639e75693/python-bioformats-4.0.0.tar.gz#sha256=9a952de4d326d961af0a497753a4b71b2f7844605023d170c931d3624e036506 (from https://pypi.org/simple/python-bioformats/), version: 4.0.0 2021-02-12T18:54:45,407 Found link https://files.pythonhosted.org/packages/61/64/de0a193af35e7052563a5a7af50461e060780f2a9dc7311504eefe921bb1/python_bioformats-4.0.0-py3-none-any.whl#sha256=53056361d217be870e6071a1d96fecd1519c4a3a3d7c2733b65883e6f124c8d7 (from https://pypi.org/simple/python-bioformats/), version: 4.0.0 2021-02-12T18:54:45,408 Found link https://files.pythonhosted.org/packages/f7/8c/3a767188398d7249ccab64dc2d10a7f016eb92cfd8a42bec4273f6d7d0d6/python-bioformats-4.0.1.macosx-10.15-x86_64.tar.gz#sha256=4c0f7041c81c8bdd1ccf1c5c595ddbe8fbb8f1f0001b1d6270107438fb759462 (from https://pypi.org/simple/python-bioformats/), version: 4.0.1.macosx-10.15-x86_64 2021-02-12T18:54:45,409 Found link https://files.pythonhosted.org/packages/5f/5c/ea252273130843996b17ede65c15d1db313754cf7d9245f7507d8ead177f/python-bioformats-4.0.2.tar.gz#sha256=09e21b16d880c8159a89ae6f44faa494abd32f19c604da19d3e9e092ef555249 (from https://pypi.org/simple/python-bioformats/), version: 4.0.2 2021-02-12T18:54:45,421 Given no hashes to check 1 links for project 'python-bioformats': discarding no candidates 2021-02-12T18:54:45,451 Collecting python-bioformats==4.0.2 2021-02-12T18:54:45,454 Created temporary directory: /tmp/pip-unpack-o4qylz5g 2021-02-12T18:54:49,733 Downloading python-bioformats-4.0.2.tar.gz (41.4 MB) 2021-02-12T18:54:59,916 Added python-bioformats==4.0.2 from https://files.pythonhosted.org/packages/5f/5c/ea252273130843996b17ede65c15d1db313754cf7d9245f7507d8ead177f/python-bioformats-4.0.2.tar.gz#sha256=09e21b16d880c8159a89ae6f44faa494abd32f19c604da19d3e9e092ef555249 to build tracker '/tmp/pip-req-tracker-bg3l6tea' 2021-02-12T18:54:59,918 Running setup.py (path:/tmp/pip-wheel-b0uz9baz/python-bioformats_6354c9144a1c4860981ed466b70b9ddf/setup.py) egg_info for package python-bioformats 2021-02-12T18:54:59,919 Created temporary directory: /tmp/pip-pip-egg-info-mfdm3_pu 2021-02-12T18:54:59,920 Running command python setup.py egg_info 2021-02-12T18:55:01,771 running egg_info 2021-02-12T18:55:01,776 creating /tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info 2021-02-12T18:55:01,781 writing /tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info/PKG-INFO 2021-02-12T18:55:01,785 writing dependency_links to /tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info/dependency_links.txt 2021-02-12T18:55:01,787 writing top-level names to /tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info/top_level.txt 2021-02-12T18:55:01,788 writing requirements to /tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info/requires.txt 2021-02-12T18:55:01,793 writing manifest file '/tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info/SOURCES.txt' 2021-02-12T18:55:02,128 reading manifest file '/tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info/SOURCES.txt' 2021-02-12T18:55:02,131 reading manifest template 'MANIFEST.in' 2021-02-12T18:55:02,133 warning: no files found matching '*.py' under directory 'bioformats/tests' 2021-02-12T18:55:02,134 warning: no files found matching '*.tif' under directory 'bioformats/tests' 2021-02-12T18:55:02,135 warning: no files found matching '*.xml' under directory 'bioformats/tests' 2021-02-12T18:55:02,139 writing manifest file '/tmp/pip-pip-egg-info-mfdm3_pu/python_bioformats.egg-info/SOURCES.txt' 2021-02-12T18:55:02,279 Source in /tmp/pip-wheel-b0uz9baz/python-bioformats_6354c9144a1c4860981ed466b70b9ddf has version 4.0.2, which satisfies requirement python-bioformats==4.0.2 from https://files.pythonhosted.org/packages/5f/5c/ea252273130843996b17ede65c15d1db313754cf7d9245f7507d8ead177f/python-bioformats-4.0.2.tar.gz#sha256=09e21b16d880c8159a89ae6f44faa494abd32f19c604da19d3e9e092ef555249 2021-02-12T18:55:02,281 Removed python-bioformats==4.0.2 from https://files.pythonhosted.org/packages/5f/5c/ea252273130843996b17ede65c15d1db313754cf7d9245f7507d8ead177f/python-bioformats-4.0.2.tar.gz#sha256=09e21b16d880c8159a89ae6f44faa494abd32f19c604da19d3e9e092ef555249 from build tracker '/tmp/pip-req-tracker-bg3l6tea' 2021-02-12T18:55:02,289 Created temporary directory: /tmp/pip-unpack-n726k__s 2021-02-12T18:55:02,291 Building wheels for collected packages: python-bioformats 2021-02-12T18:55:02,298 Created temporary directory: /tmp/pip-wheel-_e3y28ar 2021-02-12T18:55:02,299 Building wheel for python-bioformats (setup.py): started 2021-02-12T18:55:02,300 Destination directory: /tmp/pip-wheel-_e3y28ar 2021-02-12T18:55:02,301 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-b0uz9baz/python-bioformats_6354c9144a1c4860981ed466b70b9ddf/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-b0uz9baz/python-bioformats_6354c9144a1c4860981ed466b70b9ddf/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_e3y28ar 2021-02-12T18:55:04,193 running bdist_wheel 2021-02-12T18:55:04,206 running build 2021-02-12T18:55:04,207 running build_py 2021-02-12T18:55:04,496 creating build 2021-02-12T18:55:04,497 creating build/lib 2021-02-12T18:55:04,498 creating build/lib/bioformats 2021-02-12T18:55:04,501 copying bioformats/formatreader.py -> build/lib/bioformats 2021-02-12T18:55:04,508 copying bioformats/__init__.py -> build/lib/bioformats 2021-02-12T18:55:04,513 copying bioformats/omexml.py -> build/lib/bioformats 2021-02-12T18:55:04,520 copying bioformats/formatwriter.py -> build/lib/bioformats 2021-02-12T18:55:04,525 copying bioformats/metadatatools.py -> build/lib/bioformats 2021-02-12T18:55:04,529 copying bioformats/log4j.py -> build/lib/bioformats 2021-02-12T18:55:04,534 copying bioformats/noseplugin.py -> build/lib/bioformats 2021-02-12T18:55:04,541 creating build/lib/bioformats/jars 2021-02-12T18:55:04,544 copying bioformats/jars/bioformats_package.jar -> build/lib/bioformats/jars 2021-02-12T18:55:06,481 installing to build/bdist.linux-armv7l/wheel 2021-02-12T18:55:06,481 running install 2021-02-12T18:55:06,483 running install_lib 2021-02-12T18:55:06,489 creating build/bdist.linux-armv7l 2021-02-12T18:55:06,490 creating build/bdist.linux-armv7l/wheel 2021-02-12T18:55:06,492 creating build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,494 copying build/lib/bioformats/formatreader.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,500 copying build/lib/bioformats/__init__.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,504 copying build/lib/bioformats/omexml.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,510 copying build/lib/bioformats/formatwriter.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,514 copying build/lib/bioformats/metadatatools.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,518 copying build/lib/bioformats/log4j.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,522 copying build/lib/bioformats/noseplugin.py -> build/bdist.linux-armv7l/wheel/bioformats 2021-02-12T18:55:06,528 creating build/bdist.linux-armv7l/wheel/bioformats/jars 2021-02-12T18:55:06,531 copying build/lib/bioformats/jars/bioformats_package.jar -> build/bdist.linux-armv7l/wheel/bioformats/jars 2021-02-12T18:55:08,438 running install_egg_info 2021-02-12T18:55:08,476 running egg_info 2021-02-12T18:55:08,479 writing top-level names to python_bioformats.egg-info/top_level.txt 2021-02-12T18:55:08,482 writing requirements to python_bioformats.egg-info/requires.txt 2021-02-12T18:55:08,484 writing python_bioformats.egg-info/PKG-INFO 2021-02-12T18:55:08,489 writing dependency_links to python_bioformats.egg-info/dependency_links.txt 2021-02-12T18:55:08,498 reading manifest file 'python_bioformats.egg-info/SOURCES.txt' 2021-02-12T18:55:08,502 reading manifest template 'MANIFEST.in' 2021-02-12T18:55:08,504 warning: no files found matching '*.py' under directory 'bioformats/tests' 2021-02-12T18:55:08,506 warning: no files found matching '*.tif' under directory 'bioformats/tests' 2021-02-12T18:55:08,507 warning: no files found matching '*.xml' under directory 'bioformats/tests' 2021-02-12T18:55:08,512 writing manifest file 'python_bioformats.egg-info/SOURCES.txt' 2021-02-12T18:55:08,516 Copying python_bioformats.egg-info to build/bdist.linux-armv7l/wheel/python_bioformats-4.0.2-py3.5.egg-info 2021-02-12T18:55:08,534 running install_scripts 2021-02-12T18:55:08,696 creating build/bdist.linux-armv7l/wheel/python_bioformats-4.0.2.dist-info/WHEEL 2021-02-12T18:55:18,075 Building wheel for python-bioformats (setup.py): finished with status 'done' 2021-02-12T18:55:18,659 Created wheel for python-bioformats: filename=python_bioformats-4.0.2-py3-none-any.whl size=41405977 sha256=167bd8baebe87b768831952595286846cd3144c218f3a90381429a43e069d3f1 2021-02-12T18:55:18,660 Stored in directory: /tmp/pip-ephem-wheel-cache-ot_3oa2j/wheels/c0/80/4e/b280371e269b90f65b6530c581f34b94d9056a99e6358b2fbd 2021-02-12T18:55:18,689 Successfully built python-bioformats 2021-02-12T18:55:30,721 Removed build tracker: '/tmp/pip-req-tracker-bg3l6tea'